Citrus Sinensis ID: 022840

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Secondary Structure (PSIPRED)
cccccccccccccEEcccccccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccccccccccccEEEEEEEEcHHHHHHHHHHHcccEEEcccccccccccEEEEEEcccccEEEEEEcccccccccccEEEEccHHHHHHHHHHHcccEEEEEEccccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEcccccEccccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEccHHHHHHcccc
Coil and Loop (DISEMBL)
MAEASPAAANAELLewpkkdkrrFLHAVYRVGDLDRTIKYYTECFGmellrkrdvpeekysnaflgfgpeqSYFVVELTYNygvtsydigtgfghlaIATEDVYKMVENIRakggnvtrepgplkgmtthfafvkdpdgyIFELiqrgptpeplCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYgvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgpipglntkitsfvdpdgwktvLVDNEDFLKELQSE
Flexible Loop (DISEMBL)
MAEASPAAANAellewpkkdkrrflhavyrvgdldrtiKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKggnvtrepgplkGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgpipglNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Low Complexity Region (SEG)
MaeaspaaanaelleWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered region (IsUnstruct)
*************LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF*******
Disordered Region (DISOPRED)
******A*ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED*L******
Disordered Region (DISEMBL)
*********NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered Region (DISPRO)
**********AELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q39366	282	Putative lactoylglutathio	N/A	no	0.965	0.996	0.794	1e-132
Q948T6	291	Lactoylglutathione lyase	yes	no	0.993	0.993	0.769	1e-129
Q8W593	350	Probable lactoylglutathio	no	no	0.975	0.811	0.690	1e-118
P46235	138	Probable lactoylglutathio	yes	no	0.415	0.876	0.592	7e-40
Q9KT93	138	Probable lactoylglutathio	no	no	0.422	0.891	0.566	3e-38
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.556	8e-36
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.556	8e-36
P0AC83	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.556	2e-35
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.556	2e-35
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.556	2e-35

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/282 (79%), Positives = 251/282 (89%), Gaps = 1/282 (0%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF 67
           A NA+L+EWPKKDKRRFLH VYRVGDLDRTI++YTECFGM++LRKRDVPEEKYSNAFLGF
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 68  GPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM 127
           GPE S FVVELTYNYGV+SYDIGTGFGH AI+T+DV KMVE +RAKGGNVTREPGP+KG 
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGG 121

Query: 128 TTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE 187
            +  AFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR I+ PE
Sbjct: 122 GSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181

Query: 188 LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL 247
               + M+GYAEE ++ VLEL Y+YGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QEL
Sbjct: 182 YNT-IGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQEL 240

Query: 248 GGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           GGKITR+ GP+PGL TKI SF+DPDGWK VLVDNEDFLKEL+
Sbjct: 241 GGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica oleracea var. gemmifera (taxid: 178616)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/291 (76%), Positives = 249/291 (85%), Gaps = 2/291 (0%)

Query: 1   MAEASPAAANAEL-LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK 59
           MA  S A  + E+ LEWPKKDK+R LHAVYRVGDLDRTIK YTECFGM+LLRKRDVPEEK
Sbjct: 1   MASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGG-NVT 118
           Y+NAFLGFGPE + F +ELTYNYGV  YDIG GFGH AIATEDVYK+ E I++     +T
Sbjct: 61  YTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKIT 120

Query: 119 REPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KG +T  AF +DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR  D P+ K  +AMLGYA+ED+TTV+EL Y+YGVTEYTKGNAYAQVAI T+DVYKSAE
Sbjct: 181 LLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            V LVT+ELGGKI RQPGP+PGLNTKI SF+DPDGWK VLVDN DFLKELQ
Sbjct: 241 AVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  425 bits (1093), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/288 (69%), Positives = 237/288 (82%), Gaps = 4/288 (1%)

Query: 2   AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS 61
            +A+ A    +LL W K DKRR LH VYRVGD+DRTIK+YTEC GM+LLRKRD+PEEKY+
Sbjct: 67  GKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYT 126

Query: 62  NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
           NAFLG+GPE S+FV+ELTYNYGV  YDIG GFGH  IA +DV K VE ++AKGG V+REP
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 122 GPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           GP+KG  T  AF++DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 182 TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
           T D+PE K  +AM+GY  ED+  VLEL Y+YGVTEY KGNAYAQ+AI TDDVYK+AE + 
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           L     GGKITR+PGP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct: 307 L----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P46235|LGUL_VIBPA Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gloA PE=3 SV=2

 Score =  164 bits (415), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 94/125 (75%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDLD++IK+YTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+
Sbjct: 5   RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNW 64

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           G T YD+GT FGH+AI  +D+Y   + I+A GGNVTRE GP+KG TTH AFVKDPDGY+ 
Sbjct: 65  GKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMI 124

Query: 143 ELIQR 147
           ELIQ 
Sbjct: 125 ELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio parahaemolyticus (taxid: 670)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 92/127 (72%)

Query: 21  KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
             R LH + RVGDLD++I++YT+  GM LLRK +  E KY+ AFLG+G E    V+ELTY
Sbjct: 3   NHRILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTY 62

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
           N+GV  Y+ G  +GH+AI  +D+Y   + I+A GG VTREPGP+KG TTH AFVKDPDGY
Sbjct: 63  NWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGY 122

Query: 141 IFELIQR 147
           + ELIQ 
Sbjct: 123 MIELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  150 bits (380), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 90/124 (72%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV SYD+G  +GH+A++ ++  +  E IR  GGNVTRE GP+KG +T  AFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  150 bits (380), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 90/124 (72%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV SYD+G  +GH+A++ ++  +  E IR  GGNVTRE GP+KG +T  AFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
2213425	291	hypothetical protein [Citrus x paradisi]	0.962	0.962	0.942	1e-153
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	1.0	0.996	0.835	1e-143
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.993	1.0	0.833	1e-142
224078584	294	predicted protein [Populus trichocarpa]	1.0	0.989	0.839	1e-141
356531939	296	PREDICTED: putative lactoylglutathione l	0.986	0.969	0.830	1e-141
356555674	287	PREDICTED: putative lactoylglutathione l	0.986	1.0	0.837	1e-140
449433964	292	PREDICTED: putative lactoylglutathione l	1.0	0.996	0.815	1e-138
388520197	284	unknown [Lotus japonicus]	0.962	0.985	0.832	1e-137
255554865	280	lactoylglutathione lyase, putative [Rici	0.938	0.975	0.857	1e-136
312281931	289	unnamed protein product [Thellungiella h	0.993	1.0	0.802	1e-136

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/280 (94%), Positives = 271/280 (96%)

Query: 12  ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ 71
           ELLEWPKKDKRRFLHAVYRVGDLDRTIK+YTECFGM+LLRKRDVPEEKYSNAFLGFGPEQ
Sbjct: 12  ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ 71

Query: 72  SYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF 131
           S+FVVELTYNYGVTSYDIGTGFGH AIATEDVYK+VENIRAKGGNVTREPGPLKG TTH 
Sbjct: 72  SHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI 131

Query: 132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCA 191
           AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT+D PE K  
Sbjct: 132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT 191

Query: 192 LAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI 251
           LAMLGYAEEDQTTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI
Sbjct: 192 LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI 251

Query: 252 TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           TRQPG IPGLNTKITSFVDPDGWKTVLVDNEDFLKE+QSE
Sbjct: 252 TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/291 (83%), Positives = 266/291 (91%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+P   + ELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLGFGPE++ FVVELTYNYGV  YDIGTGFGH AIAT+DVYKMVE+IRAKGG +TRE
Sbjct: 61  TNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITRE 120

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK++
Sbjct: 121 PGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMV 180

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D PE K ++AM+GYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 KKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           NLVT+ELGGKITRQPGPIPGLNTKITSF+DPDGWKTVLVDNEDFLKEL  E
Sbjct: 241 NLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/289 (83%), Positives = 266/289 (92%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAE S A  + ELLEWPKKDKRRFLHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEGSAAVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           SNAFLGFGPE+S+FVVELTYNYGVTSYDIGTGFGH AIAT DVYKMVE+IRAKGGN+TRE
Sbjct: 61  SNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITRE 120

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG ++  AFVKDPDGYIFELIQR  TPEPLCQVMLRVGDL RS+KFYEKALGMKL+
Sbjct: 121 PGPVKGGSSVIAFVKDPDGYIFELIQRASTPEPLCQVMLRVGDLDRSVKFYEKALGMKLV 180

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           + +D PE K ++AM+GYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKS EVV
Sbjct: 181 KKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             V QELGGK+TR+PGPIPG+NTKITSF+DPDGWKTVLVDNEDFLKEL+
Sbjct: 241 EHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/293 (83%), Positives = 264/293 (90%), Gaps = 2/293 (0%)

Query: 1   MAEASPAAA--NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE 58
           MAE +  A   NAELLEWPKKDKRR LHAVYRVGDLDRTIK+YTE FGM+LLR RD+PEE
Sbjct: 1   MAEEAAKAVTPNAELLEWPKKDKRRLLHAVYRVGDLDRTIKFYTEGFGMKLLRHRDIPEE 60

Query: 59  KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVT 118
           KYSNAFLGFGPE+S FVVELTYNYGVTSYDIG GFGH AIATEDVYK+VE +RA GGN+T
Sbjct: 61  KYSNAFLGFGPEESNFVVELTYNYGVTSYDIGEGFGHFAIATEDVYKLVEKLRALGGNIT 120

Query: 119 REPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KG  +  AFVKDPDGY FELIQRGPTPEPLCQ+MLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGASVIAFVKDPDGYAFELIQRGPTPEPLCQLMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR ID PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAE
Sbjct: 181 LLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VVNLVTQELGGKITRQPGPIPG+NTKITSF+DPDGWK+VLVDNEDFLKEL  E
Sbjct: 241 VVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/289 (83%), Positives = 265/289 (91%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 10  MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 67

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLGFGPEQS+FVVELTYNYGVTSYDIGTGFGH AIAT DVYK+VE+IRAKGGN+TRE
Sbjct: 68  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNITRE 127

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEK LG++++
Sbjct: 128 PGPVKGGKSVIAFVKDPDGYAFELIQRSSTPEPLCQVMLRVGDLERSIKFYEKTLGLRVV 187

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D PE K  +AMLGYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 188 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 247

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPGP+PGLNTKITSF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 248 NIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/289 (83%), Positives = 266/289 (92%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 58

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLGFGPEQS+FVVELTYNYGVTSYDIGTGFGH AIAT DVYK+VE+IRAKGGNVTRE
Sbjct: 59  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTRE 118

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEKALG++++
Sbjct: 119 PGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVV 178

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D PE K  +AMLGYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 179 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 238

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPGPIPGLNTKIT+F+DPDGWKTVLVDN+DFLKEL+
Sbjct: 239 NIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/292 (81%), Positives = 264/292 (90%), Gaps = 1/292 (0%)

Query: 1   MAEASPA-AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK 59
           MAEA+ + A NAELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRDVPEEK
Sbjct: 1   MAEAAASLAPNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTR 119
           YSNAFLGFGPE S FVVELTYNYGV+SYDIG+GFGH AIAT+DVYK+VE+IRAKGG +TR
Sbjct: 61  YSNAFLGFGPEDSNFVVELTYNYGVSSYDIGSGFGHFAIATQDVYKLVEDIRAKGGIITR 120

Query: 120 EPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           EPGP+KG ++  AF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFY+KALGM+L
Sbjct: 121 EPGPVKGGSSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYDKALGMRL 180

Query: 180 LRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
           L+ +D PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEV
Sbjct: 181 LKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEV 240

Query: 240 VNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VN V QELGGKITRQPGP+PG+ TKI SF+DPDGWKTVLVDN DF KEL ++
Sbjct: 241 VNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/280 (83%), Positives = 256/280 (91%)

Query: 10  NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP 69
           NAELL+W KKDKRRFLHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY+NAFLGFG 
Sbjct: 5   NAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGS 64

Query: 70  EQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT 129
           EQS+FVVELTYNYGVTSYDIGTGFGH AIAT DVYK VE++RAKGGNVTREPGP+KG +T
Sbjct: 65  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGST 124

Query: 130 HFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
             AFVKDPDGY+FE+IQR  TPEPLCQVMLRVGDL RSIKFYEKALG+K+++  D PE K
Sbjct: 125 VIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQK 184

Query: 190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
             +AMLGYAEE +T VLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAE+VNL TQE GG
Sbjct: 185 YTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGG 244

Query: 250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           KITRQPGPIPGLNTKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 245 KITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554865|ref|XP_002518470.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223542315|gb|EEF43857.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/273 (85%), Positives = 252/273 (92%)

Query: 4   ASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNA 63
           A   A NA++LEWPKKDKRR LHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKYSNA
Sbjct: 3   AEATAPNADVLEWPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNA 62

Query: 64  FLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGP 123
           FLGFGPE++ FVVELTYNYGVTSYDIGTGFGH AIAT+DVYK+VE + AKGG VTREPGP
Sbjct: 63  FLGFGPEETNFVVELTYNYGVTSYDIGTGFGHFAIATQDVYKLVEEVLAKGGAVTREPGP 122

Query: 124 LKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI 183
           +KG TT  AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSI+FYEKALGMKLLR +
Sbjct: 123 VKGGTTVIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLDRSIRFYEKALGMKLLRKV 182

Query: 184 DSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 243
           D PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV
Sbjct: 183 DKPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 242

Query: 244 TQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           TQELGGKITRQPGPIPGLNTKITSF+DPDGWKT
Sbjct: 243 TQELGGKITRQPGPIPGLNTKITSFLDPDGWKT 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281931|dbj|BAJ33831.1| unnamed protein product [Thellungiella halophila]

 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/289 (80%), Positives = 256/289 (88%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEAS  A NAELL+WPKKD RRFLH VYRVGDLDRTI++YTECFGM+LLRKRDVPEEKY
Sbjct: 1   MAEASAVAPNAELLDWPKKDNRRFLHVVYRVGDLDRTIEFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           SNAFLGFGPE S FVVELTYNYGV+SYDIGTGFGH AI+T+DV KMVE +RAKGGNVTRE
Sbjct: 61  SNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVETVRAKGGNVTRE 120

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQRGPTPEPLCQVMLR GDL R+IKFYEKALGM+LL
Sbjct: 121 PGPVKGGNSVIAFVKDPDGYAFELIQRGPTPEPLCQVMLRTGDLDRAIKFYEKALGMRLL 180

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R I+ PE K  + M+GYAEE +T VLEL Y+YGVTEYTKGNAYAQ+AI TDDVYKS EVV
Sbjct: 181 RRIERPEYKYTIGMMGYAEEYETIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            +V QELGGKITR+ GP+PGL TKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 241 KIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNKDFLKELE 289

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.927	0.771	0.711	2.4e-108
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.426	0.898	0.580	8e-37
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.426	0.898	0.580	8e-37
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.426	0.918	0.556	1.7e-34
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.426	0.911	0.552	1.2e-33
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.426	0.911	0.516	5.4e-31
SGD|S000004463	326	GLO1 "Monomeric glyoxalase I"	0.628	0.561	0.297	2.2e-23
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.845	0.825	0.294	2.1e-22
ASPGD|ASPL0000011175	318	AN4174 [Emericella nidulans (t	0.683	0.625	0.291	2.8e-22
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.845	0.825	0.290	1.3e-20

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
 Identities = 195/274 (71%), Positives = 230/274 (83%)

Query:    16 WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFV 75
             W K DKRR LH VYRVGD+DRTIK+YTEC GM+LLRKRD+PEEKY+NAFLG+GPE S+FV
Sbjct:    81 WVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV 140

Query:    76 VELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVK 135
             +ELTYNYGV  YDIG GFGH  IA +DV K VE ++AKGG V+REPGP+KG  T  AF++
Sbjct:   141 IELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIE 200

Query:   136 DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAML 195
             DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLRT D+PE K  +AM+
Sbjct:   201 DPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMM 260

Query:   196 GYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP 255
             GY  ED+  VLEL Y+YGVTEY KGNAYAQ+AI TDDVYK+AE + L     GGKITR+P
Sbjct:   261 GYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKITREP 316

Query:   256 GPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             GP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct:   317 GPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 72/124 (58%), Positives = 92/124 (74%)

Query:    23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R LH + RVGDLD++I++YT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y+ G  +GH+AI  +D+Y   + I+A GG VTREPGP+KG TTH AFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 72/124 (58%), Positives = 92/124 (74%)

Query:    23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R LH + RVGDLD++I++YT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y+ G  +GH+AI  +D+Y   + I+A GG VTREPGP+KG TTH AFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 69/124 (55%), Positives = 91/124 (73%)

Query:    23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   143 ELIQ 146
             ELI+
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 69/125 (55%), Positives = 89/125 (71%)

Query:    23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS-YFVVELTYN 81
             + LH + RVG+L+R+I +YT+  GM+LLR  + PE KYS AF+G+G E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:    82 YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
             +G   YD+GTGFGH+AI  +D+Y   E I A GG VTR PGP+ G TT  AFV+DPDGY 
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   142 FELIQ 146
              E IQ
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 64/124 (51%), Positives = 87/124 (70%)

Query:    23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R LH + RVG+L++++++Y +  GM+LLRK +  E KY+ AF+G+  E    V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y++GT FGH+AI  +DVY+ VE IR  GG V RE  P+ G TT  AFV+DPD Y  
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   143 ELIQ 146
             ELIQ
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

SGD|S000004463 GLO1 "Monomeric glyoxalase I" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 195 (73.7 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
 Identities = 63/212 (29%), Positives = 92/212 (43%)

Query:    92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ----- 146
             GFGH+  +  D+ K  E + ++G    +     +G     AF   PDGY  ELI      
Sbjct:   114 GFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREG 171

Query:   147 ----RGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYA--EE 200
                 +G         M+R+ +  RS++FY+  LGMKLLRT +    K  L  LGY   + 
Sbjct:   172 QEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKT 231

Query:   201 DQT----TVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
             D      +VLEL +++G        Y  GN+    Y  + IS DD     + + +   + 
Sbjct:   232 DSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEV---KY 288

Query:   248 GGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 279
             G KI   P    G    I    DPDG+   +V
Sbjct:   289 GDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVV 320

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IGI

GO:0006749 "glutathione metabolic process" evidence=IGI

GO:0016829 "lyase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IDA

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 81/275 (29%), Positives = 127/275 (46%)

Query:    22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ ++ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
               +FV ELTYNYG+  Y +G  F  L +A+      V N R       R   PL  +   
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQA---VSNAR-------RLEWPLSKVAEG 113

Query:   131 FAFVKDPDGYIFELIQRGPTP-EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
                 + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+       E K
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYE--QDEEKK 171

Query:   190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
              AL  LGYA+ DQ   LEL    G  +++        +    ++    +++   +Q +  
Sbjct:   172 WAL--LGYAD-DQCK-LELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILT 227

Query:   250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     P      ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA-TVQVVILADPDGHEICFVGDEAF 261

GO:0005739 "mitochondrion" evidence=IEA;ISO

ASPGD|ASPL0000011175 AN4174 [Emericella nidulans (taxid:162425)]

 Score = 201 (75.8 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
 Identities = 67/230 (29%), Positives = 107/230 (46%)

Query:    81 NYGVTSYDIGT--GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
             NY +T+ +     G+GH+AI+ +++    + +   G    ++    +G   H AFVKDPD
Sbjct:    84 NYSITNGNTEPHRGYGHIAISVDNIEAACQRLEDAGYAFQKKL--TEGRMRHIAFVKDPD 141

Query:   139 GYIFELIQR-----GPTPEP----LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
             GY  E+I+R       + +P    L   MLRV D   S+K+Y++ LGM L+RTI++ E  
Sbjct:   142 GYWVEIIKRRDEAMSTSTDPATYRLNHTMLRVKDAEASLKYYQEVLGMTLVRTIENKEAA 201

Query:   190 CALAMLGY-AEEDQTT------------VLELAYSYGVTEYTKGNAYAQVAISTDD---V 233
               L  LGY A   Q T            +LEL ++YG TE  +G  Y            +
Sbjct:   202 FNLYFLGYPASNPQATEGANNPVAEWEGLLELTWNYG-TEKQEGKVYHNGNDEPQGFGHI 260

Query:   234 YKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE 282
               S + +N   +     K+  +     G    +   +DPDG+   ++ NE
Sbjct:   261 CVSVDDLNAACERFESLKVNWKKRLTDGRMKNVAFLLDPDGYWIEVIQNE 310

GO:0009438 "methylglyoxal metabolic process" evidence=RCA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IEA

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 80/275 (29%), Positives = 128/275 (46%)

Query:    22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
             +R LH V++VGD  +T  +Y +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
               +FV ELTYNYGV  Y +G  F  L +  +   + V N +     +T + G    MT  
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF--LGLTLQSA-QAVSNAKRLNWPLT-QVGDCLYMT-- 117

Query:   131 FAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
                 + P GY F LI +  P  +P+ +V L V DL RS+ ++   LGMK+   I+  E K
Sbjct:   118 ----EAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKV---IEKNEDK 170

Query:   190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
               +A++G++  D    LEL    G  ++         A   D +     ++   ++++  
Sbjct:   171 -KIAVMGFS--DNQCKLELQDIGGAVDHGTAFGRIAFACPRDQLPDIEALMKKDSEKIIT 227

Query:   250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     P      ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA-TVEVVILGDPDGHEICFVGDEAF 261

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.7943	0.9656	0.9964	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.7697	0.9931	0.9931	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.4.1.5	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00010980001	SubName- Full=Chromosome chr10 scaffold_297, whole genome shotgun sequence; (292 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00029246001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (258 aa)						•	•		0.924
	GSVIVG00038137001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (483 aa)						•			0.800
	GSVIVG00027369001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)						•			0.800
	GSVIVG00023836001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)						•			0.800
	GSVIVG00016002001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (703 aa)						•			0.800
	GSVIVG00009475001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (770 aa)						•			0.800
	GSVIVG00006903001	SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (407 aa)						•			0.800
	GSVIVG00000550001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (476 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-80
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-54
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-43
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	9e-41
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	6e-33
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-32
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-26
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-24
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	3e-17
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-16
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-16
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	5e-15
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	7e-14
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	2e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	3e-11
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	5e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-10
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-07
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	3e-07
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	4e-07
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	7e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	1e-05
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	3e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	4e-05
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	4e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	4e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	6e-05
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	9e-05
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-04
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-04
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-04
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	3e-04
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	3e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	4e-04
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	7e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	0.001
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	0.002
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	0.002
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	0.004

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  530 bits (1367), Expect = 0.0
 Identities = 220/289 (76%), Positives = 244/289 (84%), Gaps = 4/289 (1%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
            A AS AA   +LLEWPKKDKRR LH VYRVGDLDRTIK+YTEC GM+LLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLG+GPE S FVVELTYNYGV  YDIGTGFGH  IA EDV K VE ++AKGG VTRE
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKA GMKLL
Sbjct: 122 PGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLL 181

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R  D+PE K  +AM+GY  ED+TTVLEL Y+YGVTEYTKGNAYAQ+AI TDDVYK+AE +
Sbjct: 182 RKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI 241

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            LV    GGKITR+PGP+PG+NTKIT+ +DPDGWKTV VDN DFLKEL+
Sbjct: 242 KLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  239 bits (612), Expect = 2e-80
 Identities = 87/149 (58%), Positives = 108/149 (72%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF 67
           A + +L+  PK  KRR LH + RVGDLD+++ +YTE  GM+LLRKRD PE K+S AFLG+
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 68  GPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM 127
           G E S  V+ELT+N+G   YD+G GFGH+AI  +DVYK  E +RA GGNV REPGP+KG 
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 128 TTHFAFVKDPDGYIFELIQRGPTPEPLCQ 156
           TT  AFV+DPDGY  ELIQR  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  173 bits (440), Expect = 1e-54
 Identities = 60/123 (48%), Positives = 79/123 (64%), Gaps = 3/123 (2%)

Query: 24  FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG 83
           FLH + RV DL++++ +YT+  GM+LLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
               YD G GFGHLA A +DVY   E +   G  VT+ PG         AF+KDPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMK--GIAFIKDPDGYWI 118

Query: 143 ELI 145
           ELI
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  144 bits (364), Expect = 2e-43
 Identities = 66/117 (56%), Positives = 86/117 (73%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
           RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ 146
           GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  ELI+
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  138 bits (349), Expect = 9e-41
 Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           L   MLRVGDL +S+ FY + LGMKLLR  D PE+K +LA LGY +E    V+EL +++G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +Y  GN +  +AI  DDVYK+ E V    + LGG + R+PGP+ G  T I    DPDG
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDG 133

Query: 274 WKTVLVDNED 283
           +K  L+  + 
Sbjct: 134 YKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  117 bits (294), Expect = 6e-33
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY 217
           MLRVGDL RSI FY   LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTV 277
             G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K  
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 116

Query: 278 LVDNED 283
           L++ +D
Sbjct: 117 LIEEKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  115 bits (290), Expect = 3e-32
 Identities = 53/120 (44%), Positives = 70/120 (58%), Gaps = 9/120 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
             MLRV DL +S+ FY   LGMKLLR  D PE K  L  LGY +ED   VLEL Y++G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 216 E-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
           E Y  GN +  +A + DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  100 bits (250), Expect = 2e-26
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  H   RVGDL++++ +YT+  G +L+ + D  E    +AF   G      V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGG----RVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
                  G        +A + +DV    + ++A G  + REPG   G    +++ +DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRH-GWGGRYSYFRDPDG 115

Query: 140 YIFEL 144
            + EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 94.7 bits (236), Expect = 2e-24
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 21/137 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIK+Y E  GM++LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
             +FVVELTYNYG+  Y++G  F  + I ++          AK  N      P+  +   
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS-----NAKKHNW-----PVTEVEDG 110

Query: 131 FAFVKDPDGYIFELIQR 147
              VK P GY F LI +
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 77.6 bits (191), Expect = 3e-17
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 35/176 (19%)

Query: 1   MAEASP--AAANAELLEWPKKDKRRFL--HAVYRVGDLDRTIKYYTECFGMELLRKRDVP 56
           MA AS   AA N  L   P +  + ++    ++R+ D   ++ +Y+   GM LL++ D P
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 57  EEKYSNAFLGF---------GPEQSYFV------VELTYNYGVTS------YDIG----T 91
           E K+S  FLG+          PE++ +       +ELT+N+G  S      Y  G     
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 92  GFGHLAIATEDVYKMVENIRAKGGNVTREP--GPLKGMTTHFAFVKDPDGYIFELI 145
           GFGH+ I  +DVYK  E     G    ++P  G +KG+    AF+KDPDGY  E+ 
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGL----AFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 73.6 bits (181), Expect = 1e-16
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DL+  + +Y +  G E+L +     E     F       +   +   +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE-----FAFLRLGGTRLEL---FEGDEP 52

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
           +   G G  HLA   +DV   VE ++A G  +   P          A+ +DPDG + EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPW-GGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 34/153 (22%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY-------------- 73
           +YR+ D   ++ +Y+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 74  -FVVELTYNYGVTS------YDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTREP- 121
              +ELT+N+G  S      Y  G     GFGH+ I  +DVYK  E     G    ++P 
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN 199

Query: 122 -GPLKGMTTHFAFVKDPDGY---IFELIQRGPT 150
            G +KG+    AF+KDPDGY   IF+L   G T
Sbjct: 200 DGKMKGI----AFIKDPDGYWIEIFDLKTIGTT 228

Length = 233

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 69.8 bits (171), Expect = 5e-15
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            V LRVGDL +S+ FY   LG KL+  +D  E      +          VLEL  +    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGP----LRSAFFTAGGRVLELLLNETPP 59

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
                  G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPD
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPD 114

Query: 273 GWK 275
           G  
Sbjct: 115 GNL 117

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 66.6 bits (163), Expect = 7e-14
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR----------TIDSP-ELKCALAMLGYAEEDQTTVLE 207
            +VG+  ++IKFY + LGMK+LR            + P + K +  M+GY  ED   V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 208 LAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGPIPGLNTKIT 266
           L Y+YG+ +Y  GN +  + I +     +A+  N  VT+   G    +            
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK------------ 115

Query: 267 SFVDPDGWKTVLVD 280
               P G+K  L+D
Sbjct: 116 ---APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 64.1 bits (156), Expect = 2e-12
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 43/150 (28%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTV---------- 205
           Q M R+ D   S+ FY + LGM LL+ +D PE+K +L  LGY  ED  T           
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVW 87

Query: 206 -------LELAYSYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
                  +EL +++G TE       Y  GN+    +  + I+ DDVYK+ E      ++L
Sbjct: 88  TFGRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKL 142

Query: 248 GGKITRQP--GPIPGLNTKITSFV-DPDGW 274
           G +  ++P  G + GL     +F+ DPDG+
Sbjct: 143 GVEFVKKPDDGKMKGL-----AFIKDPDGY 167

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 61.7 bits (150), Expect = 3e-12
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
            V DL+    +Y E  G E+    +  + +Y+   LG       F+  +           
Sbjct: 2   PVSDLEAARAFYEELLGFEV----EEEDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI 145
           G G  HL    +D+  +V  ++A GG +   P           +V+DPDG + ELI
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWG-GREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 59.8 bits (144), Expect = 3e-11
 Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 19/141 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H    V DL+ +I +YT+  G+ L++      +      L F          L + 
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 82  YGVTSYDIG-------------TGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLK 125
                   G              G GHLA   +D       +  +   G  +        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 126 GMTTHFAFVKDPDGYIFELIQ 146
           G      + +DPDG + EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 60.8 bits (147), Expect = 5e-11
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 39/148 (26%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--------------- 200
           Q M R+ D   S+ FY + LGM LL+ +D PE+K +L  +GY +                
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 201 DQTTVLELAYSYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
            Q   +EL +++G TE       Y  GN+    +  + I+ DDVYK+ E      +ELG 
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGV 192

Query: 250 KITRQP--GPIPGLNTKITSFV-DPDGW 274
           +  ++P  G + G+     +F+ DPDG+
Sbjct: 193 EFVKKPNDGKMKGI-----AFIKDPDGY 215

Length = 233

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.4 bits (139), Expect = 1e-10
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            V L V DL  ++ FYE  LG ++L            A L        T LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGA---EFAFLRLGG----TRLEL-FEGDEP 52

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               G     +A   DDV  + E +    +  G +I   P   P        F DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERL----KAAGVEILGGPREEPWGGRVAY-FRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
           RV DL+ +  +YT+  G   L +   P   +  A+L  G      ++E        +   
Sbjct: 7   RVPDLEASRAFYTDVLG---LEEGPRPPFLFPGAWLYAGDGPQLHLIEED---PPDALPE 60

Query: 90  GTG-FGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
           G G   H+A   +D+      ++A G   T    P  G      FV+DPDG   EL
Sbjct: 61  GPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG-VRQL-FVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 23/135 (17%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELL-RKRDVPEEKYSNAFLGFGP----------EQSYF 74
           H    V DL+  +K+Y +  G+    R+    E+    AFLG G           + S  
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDSPI 62

Query: 75  VVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAF 133
              L           G G  H+A   +D+   +  ++A+G  +  + GP  G      AF
Sbjct: 63  AKFLEKR--------GEGLHHIAFEVDDIDAALARLKAQGVRLL-QEGPRIGAGGKRVAF 113

Query: 134 V--KDPDGYIFELIQ 146
           +  KD  G + EL++
Sbjct: 114 LHPKDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 30/124 (24%)

Query: 159 LRVGDLGRSIKFYEKALGMKL---------LRTIDSPELKCALAMLGYAEEDQTTVLELA 209
           L V DL  +  FYE+ LG ++          R      L   + ++G  E D        
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAP------ 54

Query: 210 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                     G     +    DD+     +V  + +  GG I   P   P    +     
Sbjct: 55  ----------GGGGVHLYFEVDDL---DALVARL-KAAGGTILEPPEDTPW-GGREFYVR 99

Query: 270 DPDG 273
           DPDG
Sbjct: 100 DPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 27/131 (20%)

Query: 27  AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS 86
           A+Y V DL+    +Y +  G+EL+ K D        AF   G       + L ++ G TS
Sbjct: 5   ALY-VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRG----MLLLFDPGATS 54

Query: 87  YDIGTGFGH---------LAIATEDVYKMVENIRAKGGNV---TREPGPLKGMTTHFAFV 134
              G    H          AI  E++ +   ++ AKG  +    + P   + +     + 
Sbjct: 55  TPGGEIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL-----YF 109

Query: 135 KDPDGYIFELI 145
           +DPDG + EL 
Sbjct: 110 RDPDGNLLELA 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  H    V DL+   K+Y +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH-FAFV--KDP 137
            +  +    G G  H+AI  +D+   +E ++ KG  +  E  P  G      AF+  K  
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEE-PRIGAHGKPVAFLHPKST 119

Query: 138 DGYIFELIQ 146
            G + EL Q
Sbjct: 120 GGVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 33  DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY--NYGV-TSYDI 89
           D  R+ ++Y E  G+ L+R+   PE K     L    E     +EL    N     SY  
Sbjct: 13  DYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEY---QIELFSFPNPPPRPSYPE 69

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAFVKDPDGYIFELIQ 146
             G  HLA A ED+   V  ++A G  V  EP  +   T   F F  DPDG   EL +
Sbjct: 70  ACGLRHLAFAVEDIEAAVAELKAHG--VEVEPIRVDEFTGKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 17/131 (12%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLL-RTIDSPELKCALAMLGYAEEDQTTVLELAYSY-- 212
            V L V DL  SI FY   LG++L+  T++  +      +L    +     L   + +  
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 213 ----------GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN 262
                      +           +A   DD       +  +  + G +I        G  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPD-GVRIELGEPGRGG-- 121

Query: 263 TKITSFVDPDG 273
                F DPDG
Sbjct: 122 -VHVYFRDPDG 131

Length = 138

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 16/123 (13%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
                V DL     +Y E +G+       V  E     +L       + ++ L       
Sbjct: 6   GVGLGVPDLAAAAAFYREVWGLS------VVAEDDGIVYLR-ATGSEHHILRLR-----R 53

Query: 86  SYDIGTGFGHLAIAT-EDVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIF 142
           S          ++A+  DV  +   + A+GG V  EPG     G    F F  DPDG + 
Sbjct: 54  SDRNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFF-DPDGRLI 112

Query: 143 ELI 145
           E  
Sbjct: 113 EFS 115

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 24/110 (21%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DLD    ++ +  G+          +    AF   G +     VEL       
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 86  SYDI--GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF 133
           S+    G G  H+A   +D+   V  + A+G  V  +           AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 25/134 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRK---RDVPEEK---YSNAFLGFGPEQSYFVVELT 79
           H      D   T+ +YT+  G+ L++K   +D P      + +     G   ++F     
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDA 63

Query: 80  YNYGVTSYDIGTG-FGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF-- 133
              G      G G   H+A +      +    E +RA G  V+       G+   F    
Sbjct: 64  GPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVS-------GVVDRFGERS 112

Query: 134 --VKDPDGYIFELI 145
              +DPDG   EL 
Sbjct: 113 LYFEDPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DL+R+  +Y    G+    +    E+  S      G   +Y V++        
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGG---TYLVLQQADGESAG 60

Query: 86  SYDI-GTGFGHLAI---ATEDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVKDPDG 139
            +D    G  HLA    + E V ++   +  +G  +   P      G   +  F +DPDG
Sbjct: 61  RHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDG 120

Query: 140 YIFELI 145
              EL+
Sbjct: 121 IRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 21/124 (16%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY---SNAFLGFGPEQSYFVVELTYNY 82
           H    V DL+++I +Y +  G EL+      +E Y   +  ++    E S    E TY  
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYT- 57

Query: 83  GVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
                       H+A  I +E+  +  E ++A G  +  E   ++G      F  DPDG+
Sbjct: 58  ------------HIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGH 104

Query: 141 IFEL 144
           + EL
Sbjct: 105 LLEL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 29/121 (23%), Positives = 37/121 (30%), Gaps = 24/121 (19%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR--TIDSPELKCALA----MLGYAEEDQTTVLELAYSY 212
           L V DL R+  FYEK  G        +         A      G                
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARP---------- 64

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
                  G     +  + DD+  + E V       GGK+ R     PG    I  FVDP+
Sbjct: 65  ---GSPPGGGGWVIYFAVDDIDATLERV----VAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 273 G 273
           G
Sbjct: 117 G 117

Length = 127

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 27/122 (22%), Positives = 36/122 (29%), Gaps = 21/122 (17%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEEKYS------NAFLGFGPEQSYFVVELTYNYGV 84
             D +R   +Y   FG             Y+       A  G                G 
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGAVGGLMKAPEPAAGSPP---GW 63

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
             Y           A +DV      + A GG V   P  + G+   FA   DP+G +F L
Sbjct: 64  LVY----------FAVDDVDAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGL 112

Query: 145 IQ 146
            Q
Sbjct: 113 WQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 30/173 (17%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTYN 81
           R  H   RV DLD++ ++Y +  G          E      +L G    Q + +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFR------ETESDKEYIYLRGIEEFQHHSLVLTKAP 57

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
               SY      G      ED+ K  +  +  G  V       +        V+DP GY 
Sbjct: 58  SAALSY-----IGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALR---VEDPFGYP 109

Query: 142 FEL---------------IQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
            E                  RG +P  L    + V D+ R+++FY++ LG ++
Sbjct: 110 IEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRV 162

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSYFV-VELTYNYG 83
                V D D+ + +YTE  G E+  + DVP    +   ++   P  S    + L     
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGGGFR--WVTVAPPGSPETSLVLAPPAN 56

Query: 84  VTSYDIGT---GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             +   G    G   L + T+D+    E ++A+G   T EP  +   T   A  +DPDG 
Sbjct: 57  PAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGT--VAVFRDPDGN 114

Query: 141 IFELIQ 146
           +F L+Q
Sbjct: 115 LFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
            V LRV DL RS+ FY+  LG+++L   DS
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.3 bits (90), Expect = 7e-04
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 12/128 (9%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +R  H V  V D++ T+ +YT   GME++R  +    + +   L FG  Q   +  +   
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE-EVGRKA---LRFGS-QKINLHPVGGE 56

Query: 82  YGVTSYDIGTGFGHLAIATEDVYK-MVENIRAKGGNVTREPGPLKGMTTHFA----FVKD 136
           +   +   G G   L + TE     +V ++ A G  V  E GP+            + +D
Sbjct: 57  FEPAAGSPGPGSDDLCLITEPPIDELVAHLEAHG--VPIEEGPVPRTGARGPITSVYFRD 114

Query: 137 PDGYIFEL 144
           PDG + EL
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 26/130 (20%)

Query: 157 VMLRVGDLGRSIKFYEKA---LGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           V L V DL R+  FY+     LG+K +              +GY +        +   + 
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGP-------GAVGYGKGGGGPDFWVTKPFD 56

Query: 214 VTEYTKGNAYAQVAISTDD------VYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--I 265
               T GN    VA +          + +A          GG     PG  P        
Sbjct: 57  GEPATAGNG-THVAFAAPSREAVDAFHAAA-------LAAGGTDEGAPGLRPHYGPGYYA 108

Query: 266 TSFVDPDGWK 275
               DPDG K
Sbjct: 109 AYVRDPDGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 20/123 (16%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAF------LGFGPEQSYFVVELTYNYG 83
            V DL+R   +Y + FG       D+ E +Y+          G    +           G
Sbjct: 16  PVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGG---G 72

Query: 84  VTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFE 143
              Y           A +D+   +E + A GG V R      G      FV DP+G  F 
Sbjct: 73  WVIY----------FAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFV-DPEGNRFG 121

Query: 144 LIQ 146
           L  
Sbjct: 122 LWS 124

Length = 127

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 53/255 (20%), Positives = 84/255 (32%), Gaps = 43/255 (16%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV--ELT 79
             F    + VGD  +   YY   FG E + K     EK S+        Q  FV+    +
Sbjct: 1   DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQ---GQINFVLTAPYS 57

Query: 80  YNYGVTSYDI--GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDP 137
            +     +    G G   +A   +D     E    +G    + P  L       A +K  
Sbjct: 58  SDSPAADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGI 117

Query: 138 DGYIFELIQRG-----------------PTPEPLCQVMLRV----------GDLGRSIKF 170
              +  L+ RG                    EP   V L            G +    +F
Sbjct: 118 GDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEF 177

Query: 171 YEKALGMKLLRTIDSPELKCAL---AMLGYAEEDQTTVLELAYSYG---VTEYTKGNAYA 224
           YEK  G + +R+ D      AL    M     + +  + E A       + E+ +    A
Sbjct: 178 YEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYNGA 237

Query: 225 QV---AISTDDVYKS 236
            V   A++TDD+ ++
Sbjct: 238 GVQHIALNTDDIVRT 252

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.3 bits (85), Expect = 0.004
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 18/126 (14%)

Query: 24  FLHAVYRVGDLDRTIKYYTECF---GMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
             H    V DL+R   +Y       G++ +        +     +G+G         +T 
Sbjct: 1   IDHVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTK 53

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAK----GGNVTREPGPLKGMTTHF--AFV 134
            +       G G  H+A A     + V+   A     GG     PG        +  A+V
Sbjct: 54  PFDGEPATAGNGT-HVAFAAPSR-EAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYV 111

Query: 135 KDPDGY 140
           +DPDG 
Sbjct: 112 RDPDGN 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PLN02300	286	lactoylglutathione lyase	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	100.0
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.9
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.9
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.85
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
PLN02367	233	lactoylglutathione lyase	99.83
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.83
PRK10291	129	glyoxalase I; Provisional	99.83
PLN02367	233	lactoylglutathione lyase	99.83
PRK10291	129	glyoxalase I; Provisional	99.8
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.79
PRK11478	129	putative lyase; Provisional	99.79
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.79
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.78
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
PLN03042	185	Lactoylglutathione lyase; Provisional	99.78
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.76
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.76
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.76
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.76
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.76
PLN02300	286	lactoylglutathione lyase	99.76
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.75
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.75
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.74
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.74
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.73
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.73
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.73
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.73
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.72
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.71
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.71
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.7
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.7
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.7
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.7
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.7
PRK11478	129	putative lyase; Provisional	99.7
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.7
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.7
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.7
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.69
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.69
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.69
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.69
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.68
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.68
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.68
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.68
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.68
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.67
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.67
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.67
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.67
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.67
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.67
PRK06724	128	hypothetical protein; Provisional	99.67
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.66
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.66
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.66
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.65
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.65
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.65
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.65
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.65
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.64
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.64
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.64
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.64
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.64
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.63
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.63
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.63
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.63
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.62
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.62
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.62
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.62
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.62
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.62
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.61
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.61
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.61
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.61
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.61
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.6
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.6
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.6
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.6
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.59
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.59
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.59
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.59
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.59
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.59
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.59
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.58
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.58
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.58
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.58
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.58
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.58
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.58
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.57
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.57
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.56
PRK06724	128	hypothetical protein; Provisional	99.56
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.56
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.56
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.56
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.56
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.56
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.55
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.55
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.55
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.54
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.54
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.54
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.54
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.53
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.53
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.53
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.53
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.52
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.52
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.52
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.51
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.51
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.51
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.5
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.5
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.5
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.49
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.49
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.48
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.48
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.47
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.46
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.46
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.45
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.45
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.45
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.42
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.42
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.35
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.3
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.23
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.2
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.18
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.15
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	99.14
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.09
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.03
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.01
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.01
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.99
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.97
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.97
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.95
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.89
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.87
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.85
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.74
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.7
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.5
PRK10148	147	hypothetical protein; Provisional	98.37
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.33
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.2
PRK10148	147	hypothetical protein; Provisional	98.2
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.19
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.05
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.67
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.95
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.86
PF15067	236	FAM124: FAM124 family	96.65
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.52
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.92
PF15067	236	FAM124: FAM124 family	94.09
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	88.12
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	81.28

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=6.5e-45  Score=308.97  Aligned_cols=284  Identities=77%  Similarity=1.268  Sum_probs=233.0

Q ss_pred             CcCCCCCCchhhccCCCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeec
Q 022840            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN   81 (291)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~   81 (291)
                      |+||.+++.+.+.+|++|++.++.|++|.|+|++++++||+++|||++..+...++..+...++..++....+.+++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            67888999999999999999999999999999999999999999999877655444455567776654445566777654


Q ss_pred             CCCCcccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCCCCceEEEeee
Q 022840           82 YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v  161 (291)
                      .+......+.+..|++|.|+|+++++++|+++|+++...+...+++...++||+||+|+.|||++....+.++.|+.|.|
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            43333345568899999999999999999999999888877776655445789999999999999999999999999999


Q ss_pred             CCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHHHHHH
Q 022840          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~  241 (291)
                      +|++++.+||+++|||++......++..+.+.++..++......+++..+.+...+..+++++|++|.|+|+++.++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence            9999999999999999987654444445666666543332344566655444333445688999999999999999999 


Q ss_pred             HHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhhhh
Q 022840          242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~  289 (291)
                         +++|+++..+|...|+.+++.++|+||+|+.++|++.+++.|+|+
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence               999999999988887755688999999999999999999999885

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=100.00  E-value=1.3e-31  Score=230.00  Aligned_cols=237  Identities=21%  Similarity=0.217  Sum_probs=162.8

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++++||+|.|+|++++++||+++|||++..+...      ..++..........+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            68999999999999999999999999998754321      23333211111223333221       124789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC---------------------CCCceE
Q 022840          101 E---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT---------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~---------------------~~~~~~  156 (291)
                      +   |+++++++|+++|+++...+.....+....+||+||+|+.|||+.....                     +.+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            7   7899999999999997655432211222347899999999999975421                     234899


Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccce-eeeeeccccCCceeEEEEeeecCceeeccCcc-eeEEEEEecchH
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC-ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA-YAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g-~~hi~~~v~d~~  234 (291)
                      +.|.|+|++++.+||+++|||++..+...+.+.. ...|+..+..  ...+.+..       ..+.| ++|++|.|+|++
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~g~~~Hiaf~v~~~~  219 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVG-------DPEPGKLHHVSFFLDSWE  219 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--Ccccceec-------CCCCCceEEEEEEcCCHH
Confidence            9999999999999999999999876543333221 2334443221  22222211       01234 899999999755


Q ss_pred             HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++.+.+ ++|+++|+++..+|..+....++++||+||+|+.|||+.
T Consensus       220 ~v~~~~-~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       220 DVLKAA-DVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             HHHHHH-HHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            433322 444999999988887655434679999999999999973

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3e-32  Score=211.31  Aligned_cols=260  Identities=46%  Similarity=0.799  Sum_probs=218.0

Q ss_pred             hhhccCCCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-----------CCeeEEEeccCCCCcceEEEEe
Q 022840           11 AELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELT   79 (291)
Q Consensus        11 ~~~~~~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~~~   79 (291)
                      ..+..|.+.+..+.-|+++.|.|..+++.||+++|||+++..+++++           +.|.-.++++|++..+|++++.
T Consensus         5 ~d~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELT   84 (299)
T KOG2943|consen    5 LDLLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELT   84 (299)
T ss_pred             hhhhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEE
Confidence            36778888899999999999999999999999999999998888877           6788889999999999999999


Q ss_pred             ecCCCCcccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCCCCceEEEe
Q 022840           80 YNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVML  159 (291)
Q Consensus        80 ~~~~~~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l  159 (291)
                      ++-+...+..|.+..||.+.++|+-..++.+...|.+        ..|.. .+++.||||..++|.+..+.+.++..|++
T Consensus        85 YNYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~g~~-~~~v~dPdGykF~l~~~~p~s~pv~~V~l  155 (299)
T KOG2943|consen   85 YNYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK--------GSGCG-IAFVKDPDGYKFYLIDRGPQSDPVLQVML  155 (299)
T ss_pred             eccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCc--------ccceE-EEEEECCCCcEEEEeccCCCCCCeEEEEE
Confidence            9999999999999999999999987777776665542        12223 47799999999999998899999999999


Q ss_pred             eeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHHHH
Q 022840          160 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEV  239 (291)
Q Consensus       160 ~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~  239 (291)
                      +|.|+++++.||.+.||+++.+.    +.+++...++++++  ...|+|+.+.+...+..+.|.-.+++..+++..+.+.
T Consensus       156 ~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~  229 (299)
T KOG2943|consen  156 NVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEA  229 (299)
T ss_pred             EehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHH
Confidence            99999999999999999998764    22356667777654  5889999988887776667777777777888999888


Q ss_pred             HHHHHHHhCCEeecCCcccCCCCc---eEEEEECCCCceEEEecchhhhhhhh
Q 022840          240 VNLVTQELGGKITRQPGPIPGLNT---KITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       240 l~~~~~~~G~~~~~~p~~~~~~~~---~~~~~~DP~G~~iel~~~~~~~~~~~  289 (291)
                      +    +..+.++..+....++.++   .++-+-||||+.|+|+..+++++.++
T Consensus       230 i----K~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  230 I----KSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             H----HHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            8    8887777776655443332   45668999999999999999998764

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=6.9e-31  Score=224.59  Aligned_cols=237  Identities=22%  Similarity=0.258  Sum_probs=164.7

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ++++++||.|.|+|++++++||+++|||++..+..  .    ..++..........+.+...       ...++.|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~--~----~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK--E----YIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC--C----eEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            57899999999999999999999999999865421  1    33443211111222333221       22368899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC---------------CCCCceEEEeee
Q 022840          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLRV  161 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~---------------~~~~~~~v~l~v  161 (291)
                      |+   |+++++++|+++|+++...+.  +++. ..+||+||+||.|||+....               .+.++.|+.|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~~~~-~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--GGQP-EALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--CCCc-eEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            97   789999999999998765432  2222 35899999999999987331               235689999999


Q ss_pred             CCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHHHHHH
Q 022840          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~  241 (291)
                      +|++++.+||+++|||++..+.....+.....++.....  .+.+.+..       ..+++++|++|.|+|.+++. .+.
T Consensus       145 ~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v~-~~~  214 (294)
T TIGR02295       145 PDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTN-------GNGPRLHHIAYWVHDPLNII-KAC  214 (294)
T ss_pred             CCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeec-------CCCCceeeEEEEcCCHHHHH-HHH
Confidence            999999999999999998765433333333444443221  22333321       12468999999999954432 233


Q ss_pred             HHHHHhCCE--eecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          242 LVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       242 ~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      ++|+++|++  +...|..+...+.+++|++||+|+.|||+...
T Consensus       215 ~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       215 DILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             HHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            444999998  66666655443457899999999999998744

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=100.00  E-value=2.4e-30  Score=220.18  Aligned_cols=232  Identities=18%  Similarity=0.236  Sum_probs=162.9

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      |.++.||+|.|+|++++++||+++|||++.....  ++   ..|+..+..  ...+.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDSR--AHRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCCC--ceEEEEEECC-------cCCeeeEeeee
Confidence            5789999999999999999999999998754311  11   335555332  2233333221       12577999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCcc---CCCCceEEEEEECCCCcEEEEEEcCC--------C----------CCCceE
Q 022840          101 ED---VYKMVENIRAKGGNVTREPGP---LKGMTTHFAFVKDPDGYIFELIQRGP--------T----------PEPLCQ  156 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~DP~G~~iel~~~~~--------~----------~~~~~~  156 (291)
                      +|   ++++.++|+++|+++...+..   ..++ ...++|.||+||.+||+....        .          +.++.|
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~-~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H  145 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGV-LGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGH  145 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccc-eEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccE
Confidence            98   889999999999997765432   1222 335889999999999986331        1          236899


Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccC--ccc-ceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS--PEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      |.|.|+|++++.+||+++|||++..+...  +++ .+...++...+.  +..+.+...      ....+++|++|.|+|+
T Consensus       146 v~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~~------~~~~~~~Hiaf~v~d~  217 (286)
T TIGR03213       146 IVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAAG------PSEKRLNHLMLEVDTL  217 (286)
T ss_pred             EEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            99999999999999999999998765322  111 123455554332  333433221      1246889999999986


Q ss_pred             HH---HHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          234 YK---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++   ..++|    +++|+ ....|.+++..+.+++|++||+|+.|||..
T Consensus       218 ~~v~~~~~~l----~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       218 DDVGLALDRV----DADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             HHHHHHHHHH----HHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            66   45555    99999 555666665555778999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.90  E-value=9.6e-22  Score=171.62  Aligned_cols=223  Identities=22%  Similarity=0.321  Sum_probs=152.7

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc------ccCCCCceE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~------~~~~~g~~~   95 (291)
                      ++++||.+.|+|++++.+||++.|||+.........+ .....+..+    ...+++..+.....      ..+|.|++|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~-~~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHRE-KASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCc-eeEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEE
Confidence            4789999999999999999999999998876322222 223334432    24455554332211      126789999


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC---------------------C----
Q 022840           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP---------------------T----  150 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~---------------------~----  150 (291)
                      |||.|+|++++++++.++|+++..+|.....|...+.-+..++|..+-|++...                     .    
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            999999999999999999999877665431122222335666666666665321                     0    


Q ss_pred             CCCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCccc--ceeeeeeccccCCceeEEEEeeecC---ce------ee
Q 022840          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYG---VT------EY  217 (291)
Q Consensus       151 ~~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~---~~------~~  217 (291)
                      -..++|++++|+  |++++..||+++|||++..+......  ......+.  ..++...|+|..+..   ..      ..
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~--~~~g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMA--SPDGKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEE--CCCCcEEEEEeccCCCCCCCHHHHHHHH
Confidence            123899999999  99999999999999998765442211  11111222  122356777766321   11      12


Q ss_pred             ccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCC
Q 022840          218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       218 ~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ..+.|++||||.|+|+++++++|    +++|++++.+|
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P  267 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTP  267 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCC
Confidence            24789999999999999999999    99999999877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.90  E-value=1.2e-21  Score=156.94  Aligned_cols=195  Identities=20%  Similarity=0.297  Sum_probs=142.7

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC-CCcccCCCCceEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG-VTSYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~g~~~i~~   98 (291)
                      .-+.+..++|.|+|++.+..||+++||+++..+...      .+.++.+.. .  .+.+.+.+. ........|+.|++|
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg~-~--LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGGT-P--LLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCCE-E--EEEEEeCCCCCCCCccccceeeeee
Confidence            457889999999999999999999999999876432      455665432 2  344444322 223345569999999


Q ss_pred             EECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC-------------------------
Q 022840           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT-------------------------  150 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~-------------------------  150 (291)
                      .+++   +..++.++...|+.+.. ...  ..-...+||.||+||.||++..++.                         
T Consensus        78 LlP~r~~L~~~l~hl~~~~~~l~G-a~D--H~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~~  154 (265)
T COG2514          78 LLPTREDLARVLNHLAEEGIPLVG-ASD--HLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLEE  154 (265)
T ss_pred             ecCCHHHHHHHHHHHHhcCCcccc-cCc--chhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhhh
Confidence            9985   66778888999988752 121  2223358999999999999987531                         


Q ss_pred             -----------CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceee-c
Q 022840          151 -----------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-T  218 (291)
Q Consensus       151 -----------~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~  218 (291)
                                 ...|.||.|.|.|++++.+||.++|||+++.+.+      ...|++.++.+++.....+...+.... .
T Consensus       155 ~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~  228 (265)
T COG2514         155 ATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNA  228 (265)
T ss_pred             ccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCC
Confidence                       1338999999999999999999999999887622      457888888888887776665444322 2


Q ss_pred             cCcceeEEEEEecc
Q 022840          219 KGNAYAQVAISTDD  232 (291)
Q Consensus       219 ~~~g~~hi~~~v~d  232 (291)
                      ...|+..+.+.+++
T Consensus       229 ~~~GLa~~~i~~~~  242 (265)
T COG2514         229 NASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCcceEEEEcCC
Confidence            33577788888876

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=9.7e-20  Score=140.12  Aligned_cols=139  Identities=61%  Similarity=1.036  Sum_probs=104.9

Q ss_pred             hhccCCCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCC
Q 022840           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~   91 (291)
                      ++.+.++...++++||.|.|+|++++.+||+++|||++......+......++++.+.......+++...........+.
T Consensus         6 ~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~   85 (150)
T TIGR00068         6 DLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGN   85 (150)
T ss_pred             ccccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCC
Confidence            45566778899999999999999999999999999998765544444444566665433334455554433222333455


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        92 g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      +..|++|.|+|+++++++|.++|+++..++...+++...++||+||+|+.|||++....
T Consensus        86 g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            78999999999999999999999998777765555545457899999999999987643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.85  E-value=1.4e-19  Score=156.75  Aligned_cols=224  Identities=17%  Similarity=0.254  Sum_probs=158.1

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC--CeeEEEeccCCCCcceEEEEeecCC--C---------------
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYG--V---------------   84 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~--~---------------   84 (291)
                      ++||.++|.|..++..||+..|||+.+.......+  ......++.+  ...+++.-.....  .               
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g--~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG--DLVFLFTAPYSPKIGAGDDDPASTAPHPSFS   78 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC--CEEEEEeCCCCCccccccccccccccccccC
Confidence            58999999999999999999999998876543222  2334445433  3333332221110  0               


Q ss_pred             Cc------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCC----CceEEEEEECCCCcEEEEEEcCC-----
Q 022840           85 TS------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG----MTTHFAFVKDPDGYIFELIQRGP-----  149 (291)
Q Consensus        85 ~~------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~----g~~~~~~~~DP~G~~iel~~~~~-----  149 (291)
                      ..      ..+|++++.|+|+|+|++++++++.++|++...+|.....    |...+.-++.++|..+-|++...     
T Consensus        79 ~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~~~  158 (398)
T PLN02875         79 SDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDGAK  158 (398)
T ss_pred             cHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCCCc
Confidence            00      1377899999999999999999999999997777665432    22333447888888888887421     


Q ss_pred             ----------C--------CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCccc-----ceeeeeeccccCCceeEE
Q 022840          150 ----------T--------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTTVL  206 (291)
Q Consensus       150 ----------~--------~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l  206 (291)
                                .        -.+|+|+++.|.+++.+..||+++|||+.....+..+.     +.....+.  .++....+
T Consensus       159 f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~--sp~g~v~i  236 (398)
T PLN02875        159 FLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLA--SNNEMVLL  236 (398)
T ss_pred             cCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEE--cCCCcEEE
Confidence                      0        12589999999999999999999999998765443221     12344444  33345778


Q ss_pred             EEeeecCc----e------eeccCcceeEEEEEecchHHHHHHHHHHHHHh----CCEeecCC
Q 022840          207 ELAYSYGV----T------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  255 (291)
Q Consensus       207 ~l~~~~~~----~------~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~----G~~~~~~p  255 (291)
                      +|.++...    .      ....|+|++||||.|+||.+++++|    +++    |++++..|
T Consensus       237 pLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        237 PLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             EeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            88775321    1      1335789999999999999999999    998    99999865

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=4.8e-19  Score=139.32  Aligned_cols=147  Identities=34%  Similarity=0.579  Sum_probs=108.6

Q ss_pred             CCcCCCCCCchhhc--cCC--CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCC-----
Q 022840            1 MAEASPAAANAELL--EWP--KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ-----   71 (291)
Q Consensus         1 ~~~~~~~~~~~~~~--~~~--~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~-----   71 (291)
                      ||.||+-++++.+-  .++  ...-.++.|++|.|.|++++++||+++|||++..+...++.+++.++++.++..     
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~   80 (185)
T PLN03042          1 MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTD   80 (185)
T ss_pred             CCCCCcCCcccCcccccCCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcc
Confidence            77788777666432  222  334689999999999999999999999999998887766666778887643211     


Q ss_pred             ----------cceEEEEeecCCCCc------cc----CCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEE
Q 022840           72 ----------SYFVVELTYNYGVTS------YD----IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF  131 (291)
Q Consensus        72 ----------~~~~l~~~~~~~~~~------~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~  131 (291)
                                ....|+|.++.+...      +.    .+.|+.||+|.|+|+++++++|+++|+.+...|....+  ..+
T Consensus        81 ~~~~~~~l~~~~~~lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~  158 (185)
T PLN03042         81 PPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGL  158 (185)
T ss_pred             hhhcccccccCCCEEEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeE
Confidence                      134677876443221      22    22489999999999999999999999998766543222  234


Q ss_pred             EEEECCCCcEEEEEEcCC
Q 022840          132 AFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       132 ~~~~DP~G~~iel~~~~~  149 (291)
                      +||+||+|+.|||++...
T Consensus       159 ~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        159 AFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             EEEECCCCCEEEEEECCC
Confidence            778999999999998763

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=7.1e-20  Score=146.74  Aligned_cols=129  Identities=33%  Similarity=0.590  Sum_probs=105.3

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCC---------------ceeEEEEeeecCcee
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVTE  216 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~  216 (291)
                      ..+.|++|+|.|++++++||+++|||++..+...+++++.++|+++++..               ....|||+++++...
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            35899999999999999999999999998888777777899998753311               135899988776431


Q ss_pred             ------eccC----cceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhh
Q 022840          217 ------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       217 ------~~~~----~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                            |..+    .|++||+|.|+|+++++++|    +++|+++...|....+  .+++|++||||++|||+|.....+
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~~  227 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIGT  227 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccccc
Confidence                  3333    48999999999999999999    9999999987765333  568899999999999999877654

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.83  E-value=1.3e-19  Score=139.38  Aligned_cols=137  Identities=45%  Similarity=0.789  Sum_probs=104.9

Q ss_pred             CCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      ...++.|+.+.|+|++++.+||+++|||++..+...+..++...+++.+.......+++....+..+...+.++.|++|.
T Consensus        14 ~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f~   93 (150)
T TIGR00068        14 KKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIG   93 (150)
T ss_pred             CCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEEe
Confidence            45679999999999999999999999999876544344344556666543333455665443332222334588999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhhhhc
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~  290 (291)
                      |+|++++.+++    .++|+++..+|...+....+.+||+||+|+.|||++..+..+.||.
T Consensus        94 v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~  150 (150)
T TIGR00068        94 VDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGLGN  150 (150)
T ss_pred             cCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhccC
Confidence            99999999999    9999999887765555445788999999999999999999999883

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PRK10291 glyoxalase I; Provisional

Probab=99.83  E-value=4.4e-19  Score=132.94  Aligned_cols=123  Identities=54%  Similarity=0.971  Sum_probs=94.0

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022840           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++......+...+..+++..++......+++....+..+...+.++.|+||.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999987765555555667777665433344556654333333345567899999999999999


Q ss_pred             HHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840          108 ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      ++|+++|+++..++...+++...++||+||||+.|||++....
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~  123 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  123 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccc
Confidence            9999999998776666666555557889999999999997753

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=8.1e-19  Score=140.68  Aligned_cols=128  Identities=34%  Similarity=0.657  Sum_probs=102.6

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCC---------------cceEEEEeecCCC
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ---------------SYFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~~~~~~~~   84 (291)
                      .-..+.|+.|.|+|++++++||+++|||++..+.+.++.++..+|+++++..               ....|||.++.+.
T Consensus        72 ~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~  151 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGT  151 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCC
Confidence            4578999999999999999999999999999988888888888888653311               1346888876543


Q ss_pred             C------cccCC----CCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           85 T------SYDIG----TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        85 ~------~~~~~----~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      .      .+..+    .|+.||||.|+|+++++++|+++|+++...|....+  ..++|++||||+.|||++...
T Consensus       152 e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        152 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            3      13333    489999999999999999999999998877665433  234789999999999998764

>PRK10291 glyoxalase I; Provisional

Probab=99.80  E-value=6.9e-19  Score=131.88  Aligned_cols=124  Identities=47%  Similarity=0.830  Sum_probs=93.5

Q ss_pred             EeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHH
Q 022840          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  237 (291)
                      +|.|.|++++.+||+++|||++......+...+.+.++..++......+++..+.+..++..+.+++|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999987655444445667777654433345566655443333334568899999999999999


Q ss_pred             HHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          238 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                      ++|    +++|+++...+...++...+.+||+||||+.|||++..+..
T Consensus        81 ~~l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            999    99999998776555553345688999999999999976543

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=5.5e-18  Score=129.13  Aligned_cols=123  Identities=20%  Similarity=0.307  Sum_probs=88.4

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-----------CCeeEEEeccCCCCcceEEEEeecCCCC----
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTYNYGVT----   85 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~~~~~~~~~----   85 (291)
                      +++++||+|.|+|++++.+||++ |||++..+....+           ......++...  .....+++.....+.    
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP--DGHSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC--CCCceEEEEEecCCCCcCc
Confidence            57899999999999999999998 9998765433211           12334444432  223456665422111    


Q ss_pred             ---cccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           86 ---SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ---~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                         ....+.|+.||||.|+|+++++++|+++|+++..++....++.+ .+||+||+|+.|||+|.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r-~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYR-LCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeE-EEEEECCCCCEEEeeec
Confidence               11234578899999999999999999999998876655555544 48899999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.79  E-value=5.2e-18  Score=127.03  Aligned_cols=123  Identities=20%  Similarity=0.258  Sum_probs=84.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-CCeeEEEeccCCCCcceEEEEeecCC---CCcccCCCCce
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGTGFG   94 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~~~~g~~   94 (291)
                      +.+.+++||+|.|+|++++.+||+++|||++......+. ..+.. .+..+.   ...+++.....   ........|+.
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~   77 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALNG---QYVIELFSFPFPPERPSRPEACGLR   77 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecCC---CcEEEEEEecCCCCCCCCCCCCcee
Confidence            467889999999999999999999999999864322111 11111 122221   23445443211   11112335788


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           95 HLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |++|.|+|+++++++|+++|+++...+....+|.. ++||+||+|+.|||++
T Consensus        78 hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         78 HLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKR-FTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCE-EEEEECCCCCEEEEEe
Confidence            99999999999999999999997644333334444 5889999999999987

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.79  E-value=7e-19  Score=142.67  Aligned_cols=229  Identities=21%  Similarity=0.374  Sum_probs=161.2

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC--CeeEEEeccCCCCcceEEEEeecCCCC-----cccCCCC
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVT-----SYDIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~~~-----~~~~~~g   92 (291)
                      .+.+++||.+.|.|...+..||+..|||++....+.+.+  .+....++  .+...+++.....+...     -..+|.|
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr--~g~~vFv~~s~~~p~~~~~G~~l~~Hgdg   91 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALR--QGKIVFVFNSAYNPDNSEYGDHLVKHGDG   91 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhh--cCCEEEEEecCCCCCchhhhhhhhhcccc
Confidence            479999999999999999999999999998875533332  12222333  22333333322222211     1246778


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCC--ceEEEEEECCCCcEEEEEEcCCC-----------------C--
Q 022840           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDGYIFELIQRGPT-----------------P--  151 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~DP~G~~iel~~~~~~-----------------~--  151 (291)
                      +..+||+|+|++++.+.++++|+.+..+|....+.  ...++.++.+......+++....                 |  
T Consensus        92 vkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l  171 (381)
T KOG0638|consen   92 VKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKL  171 (381)
T ss_pred             hhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCC
Confidence            88999999999999999999999999888776543  33456678888777777775421                 1  


Q ss_pred             -----CCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCccc-----ceeeeeeccccCCceeEEEEeeecCce----
Q 022840          152 -----EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTTVLELAYSYGVT----  215 (291)
Q Consensus       152 -----~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~~~~~~~----  215 (291)
                           .+++|++.+++  .++.+.+||.+.|||...+..+...-     ..+.+.+.  ...+...+.+.++-...    
T Consensus       172 ~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n~~esi~mpinEp~~G~k~ks  249 (381)
T KOG0638|consen  172 PKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--NYEESIKMPINEPAPGKKKKS  249 (381)
T ss_pred             CccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--cCCccEEEeccCCCCCCccHH
Confidence                 34899999999  68999999999999998777654321     11222233  22233444443322111    


Q ss_pred             ------eeccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCc
Q 022840          216 ------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       216 ------~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                            .+..|+|++|+++.++||-.+++.+    +++|++++.+|.
T Consensus       250 QIqeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps  292 (381)
T KOG0638|consen  250 QIQEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPS  292 (381)
T ss_pred             HHHHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCH
Confidence                  2557889999999999999999999    999999999885

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.78  E-value=1.5e-17  Score=125.82  Aligned_cols=120  Identities=19%  Similarity=0.252  Sum_probs=90.1

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc------ccCCCCceEEE
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGFGHLA   97 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~------~~~~~g~~~i~   97 (291)
                      ++|++|.|+|++++++||+++|||++......+  .....++..+    ...+++........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999987654322  1223444322    23454543222111      12456889999


Q ss_pred             EEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      |.|+|+++++++|+++|+++..+|...+++.+ .++++||+|+.|+|++....
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~-~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGELK-IAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCeEE-EEEEeccCCcEEEEEecCCC
Confidence            99999999999999999999988887666555 48899999999999998754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.78  E-value=1.6e-17  Score=122.78  Aligned_cols=120  Identities=52%  Similarity=0.945  Sum_probs=89.2

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC-CcccCCCCceEEEEEECC
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSYDIGTGFGHLAIATED  102 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~g~~~i~~~v~d  102 (291)
                      +.||+|.|+|++++.+||+++|||++......++.....+++..........+++...... .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999877654444445566776543102334555443222 223344578899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      +++++++|+++|+++..++... ++. .++||+||+|+.+||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~-~~~-~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG-GMK-GIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC-CCc-eEEEEECCCCCEEEeC
Confidence            9999999999999988877655 333 3578999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.1e-17  Score=121.96  Aligned_cols=115  Identities=43%  Similarity=0.759  Sum_probs=86.4

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-----------CCeeEEEeccCCCCcceEEEEeecCCCCcccCC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG   90 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~   90 (291)
                      .++.|++|.|+|+++|++||+++|||++..+...++           +.+..+++.+++......+++.++.+..++..|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999877665554           333445565544455678888886665555555


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           91 TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        91 ~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      .+  |++|.|++. ++.++|+++|+++...+.    +   ++|++||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            54  677777766 456999999998875443    2   5789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.78  E-value=5.6e-18  Score=133.28  Aligned_cols=127  Identities=31%  Similarity=0.594  Sum_probs=97.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCC---------------ceeEEEEeeecCcee
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVTE  216 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~  216 (291)
                      .++.|++|+|.|++++++||+++|||++..+...+...+.+++++++...               ....|+|..+.+...
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            45999999999999999999999999998776655556778887643211               235788887543221


Q ss_pred             ------ec----cCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          217 ------YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       217 ------~~----~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                            +.    .+.|+.|++|.|+|+++++++|    ++.|+++...|....  +.+++|++||+|+.|||++....
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCCc
Confidence                  21    1248999999999999999999    999999987664322  24678899999999999997654

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.76  E-value=4.2e-17  Score=123.76  Aligned_cols=118  Identities=19%  Similarity=0.368  Sum_probs=87.0

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |+.++.||.|.|+|++++++||+++|||++..+..      ...++..+  .  ..+.+...........+.+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~--g--~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN--G--LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC--C--eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            68899999999999999999999999999875321      14455543  2  23434332222222233467899999


Q ss_pred             EC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++  |+++++++|+++|+++...+...+++.. .+||+||+||.|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKK-SIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCce-EEEEECCCCCEEEEEeCC
Confidence            97  9999999999999998766655555444 478999999999999765

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.76  E-value=2.6e-17  Score=121.70  Aligned_cols=120  Identities=43%  Similarity=0.742  Sum_probs=91.0

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc-eeeccCcceeEEEEEecc
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-TEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~g~~hi~~~v~d  232 (291)
                      +.|+.+.|+|++++.+||+++|||++.......++...+.++..++...+..+++....+. .+...+.++.|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999876544333334556666543113456666554332 223334578999999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      ++++++++    +++|+++..+|...  .+++++||+||+|+.|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            99999999    99999999887654  3468899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=3.1e-17  Score=121.88  Aligned_cols=119  Identities=25%  Similarity=0.379  Sum_probs=84.8

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc---ccCCCCceEEEEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS---YDIGTGFGHLAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~---~~~~~g~~~i~~~   99 (291)
                      +++||+|.|+|++++.+||+++|||++......+..++...|+..++   ...+++........   .....|..|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999765433333334456666532   23455554222111   1233478999999


Q ss_pred             EC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      |+   ++++++++|+++|+++..+|...++|... ++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~-~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDGYYE-SVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEE-EEEECCCCCEEEeC
Confidence            95   48999999999999988766555555443 57999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=1.9e-17  Score=126.20  Aligned_cols=122  Identities=19%  Similarity=0.259  Sum_probs=89.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-----------cceeeeeeccccCCceeEEEEeeecCcee----
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTE----  216 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  216 (291)
                      .+++|+++.|+|++++.+||++ |||++..+....+           ....+.++..+  .....++|.....+..    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP--DGHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC--CCCceEEEEEecCCCCcCcC
Confidence            3689999999999999999998 9998765432211           12344455422  2356778776432211    


Q ss_pred             ---eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                         ...+.|+.|++|.|+|+++++++|    +++|+++..++...++ +.+++|++||+|+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence               112458899999999999999999    9999999886654433 46889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.76  E-value=1.4e-17  Score=125.88  Aligned_cols=124  Identities=20%  Similarity=0.236  Sum_probs=93.3

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee------eccCcceeEEE
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYAQVA  227 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~hi~  227 (291)
                      ++|+.|.|+|++++.+||+++|||++..+....+  ....++..    ....+.+........      ...+.+++|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQ----GDINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEc----CCEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5799999999999999999999999876654321  12333332    145565544222111      12346889999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhhh
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~  288 (291)
                      |.|+|+++.+++|    +++|+++..+|...++ +.+.++++||+|+.|||++++.+...+
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~~~~~  130 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEPG-ELKIAAIKGYGDSLHTLVDRKGYKGPF  130 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecCC-eEEEEEEeccCCcEEEEEecCCCCCcc
Confidence            9999999999999    9999999998876444 568999999999999999988775543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN02300 lactoylglutathione lyase

Probab=99.76  E-value=1.4e-17  Score=141.65  Aligned_cols=133  Identities=44%  Similarity=0.761  Sum_probs=102.4

Q ss_pred             CCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      ...++.|+.|.|+|++++.+||+++|||++..+...++..+...++..+....+..+++....+......+.|+.|++|.
T Consensus        21 ~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~  100 (286)
T PLN02300         21 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIA  100 (286)
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEE
Confidence            34679999999999999999999999999876544333334556665544444667777654333333345688999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhh
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                      |+|++++.+++    +++|+++...|...++.+.+++||+||+|+.|||++++....
T Consensus       101 v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~  153 (286)
T PLN02300        101 VEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPE  153 (286)
T ss_pred             eCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Confidence            99999999999    999999998887666544577899999999999999876544

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=7.8e-17  Score=122.74  Aligned_cols=120  Identities=14%  Similarity=0.158  Sum_probs=84.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCC-eeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK-YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      +.+++|+||+|.|+|++++.+||+++|||++..+...+++. ....|+..+... + .+.+...       ++.++.|+|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~~-h-~~~~~~~-------~~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNKP-H-DIAFVGG-------PDGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCCc-c-eEEEecC-------CCCCceEEE
Confidence            45789999999999999999999999999986654322222 234455543322 1 2323211       124789999


Q ss_pred             EEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           98 IATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      |+|+|+++   +.++|+++|+++...|.....+...++||+||+||.|||+..
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99999877   568999999998755543332223358999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=6.7e-17  Score=119.99  Aligned_cols=121  Identities=26%  Similarity=0.350  Sum_probs=83.5

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC--CCc-ccCCCCceEEEE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG--VTS-YDIGTGFGHLAI   98 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~-~~~~~g~~~i~~   98 (291)
                      ++++||+|.|.|++++.+||+++|||++.......+.......+... ..  ..+++.....  ... ...+.|+.|++|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~--~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLN-GG--YQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecC-CC--cEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            68999999999999999999999999987543222211111222221 12  2344432211  111 123457889999


Q ss_pred             EECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           99 ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      .|+|+++++++|+++|+++...+....++.. ++|++||+|+.|||+|
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDEFTGKR-FTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCceE-EEEEECCCCCEEEecC
Confidence            9999999999999999997765544444444 4889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.75  E-value=3.3e-17  Score=126.31  Aligned_cols=119  Identities=26%  Similarity=0.354  Sum_probs=85.5

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC-CCCeeEEEeccCCCCcce---EEEEeecCCCCcccCCCCceEEEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSYF---VVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +|+||+|.|+|++++++||+++|||++......+ .+.....|+..++.....   .+.+..       ..+.++.||||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5899999999999999999999999987554332 222346666653221100   011111       11458999999


Q ss_pred             EECCHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATEDVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+|++++.   ++|+++|+++...+.....+...++|++||+||.|||+...
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999986   99999999987666554444455689999999999999664

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.74  E-value=1.4e-16  Score=123.95  Aligned_cols=126  Identities=29%  Similarity=0.333  Sum_probs=85.4

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEee--cC----------------CCCeeEEEeccCCCCcceEEEEeecC
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD--VP----------------EEKYSNAFLGFGPEQSYFVVELTYNY   82 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~--~~----------------~~~~~~~~l~~~~~~~~~~l~~~~~~   82 (291)
                      .++++||+|.|+|++++++||+++|||++..+..  ..                .......++..++   ...|++....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            3679999999999999999999999998753210  00                0124455565432   2235665543


Q ss_pred             CCCcc-----cCCCCceEEEEEECCHHHHHHHHHHcCCeeecCC-ccC-CCC-ceEEEEEECCCCcEEEEEEcCC
Q 022840           83 GVTSY-----DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP-GPL-KGM-TTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        83 ~~~~~-----~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~-~~~-~~g-~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      .....     ..+.|+.|+||.|+|+++++++|+++|+++...+ ... +++ ...++||+||||+.|||++...
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            22111     1246899999999999999999999998754322 211 111 1235889999999999998763

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=5.1e-17  Score=119.89  Aligned_cols=114  Identities=31%  Similarity=0.548  Sum_probs=84.8

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-----------cceeeeeeccccCCceeEEEEeeecCceeeccCc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGN  221 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      ++.|++++|+|++++++||+++|||++..+...++           +++.+.++.+.+...+..++|..+++..++..+.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            57899999999999999999999999877654443           3444455654333456789999877765555555


Q ss_pred             ceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       222 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +  |++|.|++. ++.++|    +++|+.+...|.      + ++++.||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~------~-~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNA----KKHNWPVTEVED------G-VYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHH----HHCCCceecCCC------C-EEEEECCCCCEEEEec
Confidence            5  555556654 445788    999998876443      2 7899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.74  E-value=1.8e-16  Score=117.48  Aligned_cols=116  Identities=23%  Similarity=0.243  Sum_probs=82.0

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++++|++|.|+|++++++||+++|||++.....  ++   ..++..........+.+...       ...+..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            6899999999999999999999999999865421  11   23444321122223333211       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          101 E---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .   |+++++++|+++|+++...|.....+....+||+||+||.||+....
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            7   79999999999999987654333322223488999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.73  E-value=2.9e-16  Score=118.42  Aligned_cols=117  Identities=21%  Similarity=0.253  Sum_probs=84.8

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      .+++||+|.|+|++++++||+++|||++.....  .   ...|+..+.......+.+.....     ...++.||+|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            589999999999999999999999999865432  1   24566543222233444443221     1358899999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          102 DVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |++++.   ++|+++|+++...+...+.+...++||+||+|+.|||....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            988776   59999999876655554444444579999999999999654

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=1.1e-16  Score=121.84  Aligned_cols=121  Identities=12%  Similarity=0.115  Sum_probs=85.3

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccc-eeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK-CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      +.++.|+++.|+|++++.+||+++|||++..+...+.+. ....|+.....  ...+.+..       ..+.+++|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~-------~~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVG-------GPDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEec-------CCCCCceEEEEE
Confidence            467999999999999999999999999987664322221 12334443322  23333321       113578999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      |+|++++.+.. ++|+++|+++...|.++...+++++||+||+|+.|||.+.
T Consensus        75 v~d~~~l~~~~-~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAG-DIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHH-HHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99977754333 4459999998877765543346889999999999999763

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.73  E-value=1.2e-16  Score=119.26  Aligned_cols=119  Identities=29%  Similarity=0.478  Sum_probs=84.9

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC-CCc---c--cCCCCceEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG-VTS---Y--DIGTGFGHL   96 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~---~--~~~~g~~~i   96 (291)
                      +++|++|.|+|++++++||+++|||+..............+++..++    ..+++..... ...   .  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN----TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC----EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            58999999999999999999999999865433333344556665432    2344443211 111   1  124578899


Q ss_pred             EEEECCHHHHHHHHHHcCCeeecC-CccCCCCceEEEEE--ECCCCcEEEEEE
Q 022840           97 AIATEDVYKMVENIRAKGGNVTRE-PGPLKGMTTHFAFV--KDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~DP~G~~iel~~  146 (291)
                      ||.|+|+++++++|+++|+++..+ |...++|.. ..|+  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKP-VAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCE-EEEecccccCcEEEEecC
Confidence            999999999999999999998754 555555544 3556  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.73  E-value=9e-17  Score=124.98  Aligned_cols=127  Identities=20%  Similarity=0.200  Sum_probs=88.9

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeec----cC--------------cccceeeeeeccccCCceeEEEEeeec
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI----DS--------------PELKCALAMLGYAEEDQTTVLELAYSY  212 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~  212 (291)
                      +.++.||+|.|+|++++.+||+++|||++..+.    ..              ....+.+.++..++   +..|+|....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            356899999999999999999999999764211    00              11124455665432   4457777654


Q ss_pred             Ccee-ec----cCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCccc--CCC-CceEEEEECCCCceEEEecchhh
Q 022840          213 GVTE-YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PGL-NTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       213 ~~~~-~~----~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~-~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +... ..    .+.|+.|++|.|+|++++++++    +++|+++..++...  ++. ..+++|++||||+.|||+++...
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            3221 11    2368999999999999999999    99998765433221  111 23789999999999999997654

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.72  E-value=1.5e-16  Score=119.92  Aligned_cols=122  Identities=20%  Similarity=0.162  Sum_probs=88.7

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      |.++.|+.|.|+|++++.+||+++||+++..+...     ...++..++...+..+.+.....     ...|++|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-----~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-----RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-----cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            56899999999999999999999999998755321     23455543222345565543211     136899999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      +|++++.+ +.++|+++|+++...|...+..+.+++||+||+|+.|||.....
T Consensus        71 ~d~~~~~~-~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          71 GDIDEVML-GGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CCHHHHHH-HHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            99777764 22344999999887776666555677999999999999987543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=6.5e-16  Score=120.67  Aligned_cols=124  Identities=23%  Similarity=0.303  Sum_probs=86.7

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.+.+|+|++|.|+|++++++||+++|||++........+.....|+......  ..+.+.....    ....++.||||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~~~~----~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKV--HDVAYTRDPA----GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCc--eeEEEecCCC----CCCCCceEEEE
Confidence            67899999999999999999999999999987554333222234566543222  2233322111    12236789999


Q ss_pred             EECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++|++||+|+.|||+...
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9986   5578899999999976565544333333478999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.71  E-value=4.5e-17  Score=125.55  Aligned_cols=120  Identities=21%  Similarity=0.228  Sum_probs=86.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCc-ccceeeeeeccccCC---ceeEEEEeeecCceeeccCcceeEEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEED---QTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~~~~~g~~hi~~  228 (291)
                      ++.||+|.|+|++++.+||+++||+++..+...+ .+.....|+..+...   ....+.+..       ..+.|++|++|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            4789999999999999999999999987554332 122345556543210   011111111       11468999999


Q ss_pred             EecchHHHH---HHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          229 STDDVYKSA---EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~d~~~~~---~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      .|+|++++.   ++|    +++|+++..+|+++......++|++||+|+.|||.....
T Consensus        74 ~v~die~~~~~~~~L----~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          74 EVHDFDAQGLGHDYL----REKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence            999999886   556    999999998887766545567899999999999987554

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.70  E-value=1.4e-16  Score=118.62  Aligned_cols=120  Identities=25%  Similarity=0.388  Sum_probs=84.5

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeec--CCCCeeEEEeccCCCCcceEEEEeecCCCCcccC---CCCceEEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV--PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI---GTGFGHLA   97 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~---~~g~~~i~   97 (291)
                      +|+||+|.|+|++++.+||+++|||++......  ........++..+  ...+.+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG--EGHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST--SSCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc--ccceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999887662  2223344555544  3334443333332222111   01445666


Q ss_pred             EEE---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEE
Q 022840           98 IAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus        98 ~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel  144 (291)
                      +.+   +|+++++++|+++|+++..++....++...+.|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            666   56888999999999998888777776666556799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.70  E-value=3.7e-16  Score=116.16  Aligned_cols=113  Identities=13%  Similarity=0.191  Sum_probs=82.1

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ++.+|.||+|.|+|++++.+||+++|||++..+.   .   ...|+..++.  ...+.+....        .+..|++|+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~---~---~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERT---A---KATYFRSDAR--DHTLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCC---C---CeEEEEcCCc--cEEEEEEeCC--------CceEEEEEE
Confidence            5789999999999999999999999999986432   1   1456665432  2233333211        256789999


Q ss_pred             ECC---HHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TED---VYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |+|   +++++++|+++|+++...+....  .+...++||+|||||.||++..+
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            975   99999999999998765443211  22234578999999999998665

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.70  E-value=8.6e-16  Score=115.31  Aligned_cols=120  Identities=18%  Similarity=0.220  Sum_probs=81.6

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCe-eEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY-SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |+.+++||+|.|+|++++++||+++|||++..+........ ...++..+  .  ..+.+......    ...++.|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG--G--LWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC--C--eEEEEecCCCC----CCCCceEEEE
Confidence            67899999999999999999999999998765432211000 01122222  1  23444422211    1236789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+  +++++.++|+++|+++..+ ....++.+..+||+||+||.|||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecCC
Confidence            998  7999999999999987543 222333333589999999999998653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=2.5e-16  Score=116.97  Aligned_cols=119  Identities=19%  Similarity=0.248  Sum_probs=82.8

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee---eccCcceeEEEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+...+...+...|+..++   +..+++.......+   .....|+.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999765433222223445555432   35567664322111   1233588999999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      |+|   +++.+++|    +++|+++..+|...+. +.+.++++||+|+.|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            965   66667777    9999999876654333 345578999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.70  E-value=7.5e-16  Score=118.87  Aligned_cols=121  Identities=19%  Similarity=0.299  Sum_probs=85.9

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC---CCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .-++|+||+|.|+|++++++||+++|||++.......   .......++..+....  .+.+...      ..+.++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHH--SLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCC--CEEEEcC------CCCceeEEE
Confidence            3578999999999999999999999999986543221   1123455665533222  2333222      113478999


Q ss_pred             EEEECCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIATEDVY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|.|+|++   +++++|+++|+++..++...+.+....+|++||+|+.|||+...
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            99998755   68999999999987666554443444588999999999998664

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PRK11478 putative lyase; Provisional

Probab=99.70  E-value=3.5e-16  Score=117.05  Aligned_cols=120  Identities=21%  Similarity=0.179  Sum_probs=83.2

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-cceeeeeeccccCCceeEEEEeeecCcee---eccCcceeEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~  227 (291)
                      .++.|+.+.|+|++++.+||+++|||++..+..... ..+.. .+...+   ...+++.....+..   .....|+.|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALNG---QYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999764321111 11111 122211   35666654322111   11235789999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      |.|+|+++++++|    +++|+++...+. .+..+.+++||+||+|+.|||+|
T Consensus        81 f~v~d~~~~~~~l----~~~G~~~~~~~~-~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHL----ESHNVKCEAIRV-DPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHH----HHcCCeeecccc-CCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999    999999864332 23334688999999999999987

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.70  E-value=1.1e-15  Score=113.10  Aligned_cols=114  Identities=18%  Similarity=0.242  Sum_probs=81.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.+++|+|++|.|+|++++.+||+++|||++..+..      ...++...+......+.+...       ...++.|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEE
Confidence            568899999999999999999999999999875422      144554322112233433321       1247899999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      .|+   ++++++++|+++|+++...+....++ . .+||+||+||.+|++..
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~-~-~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGDPGHG-K-AYRFRSPDGHPMELYWE  118 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCCCCCc-c-eEEEECCCCCEEEEEEe
Confidence            997   58899999999999864322222222 2 47899999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.70  E-value=5.6e-16  Score=116.33  Aligned_cols=114  Identities=21%  Similarity=0.348  Sum_probs=80.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC-
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED-  102 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d-  102 (291)
                      |+||.|.|+|++++++||+++|||++.....      ...++..+  .  ..+.+.............+..||+|.+++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIG--G--TWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeC--c--eEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999864321      13344443  2  23444332221111223467899999974 


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          103 -VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                       +++++++|+++|+++..++....++.. .+||+||+||.|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~-~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRK-SIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcce-EEEEECCCCCEEEEecCc
Confidence             999999999999997655444434444 378999999999998764

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7.6e-16  Score=113.82  Aligned_cols=114  Identities=16%  Similarity=0.227  Sum_probs=80.5

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEee----cCCCCcccCCCCceEEE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY----NYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~----~~~~~~~~~~~g~~~i~   97 (291)
                      +++.|+.|.|+|++++.+||+++|||++....    +.  ...+. +  .  +.+....    .........+.+..|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~--~~~~~-~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF----GE--NVTFE-G--G--FALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeecc----Cc--eEEEe-c--c--ceeccchhhhccCCcccccccCCceEEE
Confidence            47899999999999999999999999985321    11  11111 1  1  1111110    00111112233557999


Q ss_pred             EEECCHHHHHHHHHHcCC-eeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           98 IATEDVYKMVENIRAKGG-NVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~-~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|+ ++..+|...++|.+. ++|+|||||.|||.+.
T Consensus        70 ~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~-~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRV-VRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHHHhcCCcEEecCcccCCCccEE-EEEECCCCCEEEEecc
Confidence            999999999999999986 677788888887664 8899999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.2e-15  Score=113.25  Aligned_cols=118  Identities=29%  Similarity=0.472  Sum_probs=83.6

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC---CcccCCCCceEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGFGHLA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~---~~~~~~~g~~~i~   97 (291)
                      +++++|+.|.|+|++++++||+++|||+........  .  ..++..++    ..+++......   .....+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            578999999999999999999999999987543211  1  33344332    23444432221   1223456789999


Q ss_pred             EEECC-HHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEEE
Q 022840           98 IATED-VYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~~  146 (291)
                      |.+++ +++++++|+++|+++...+....+  +....+||+||+|+.+|+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998766654322  12234789999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.69  E-value=4e-16  Score=118.34  Aligned_cols=119  Identities=13%  Similarity=0.178  Sum_probs=85.6

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchH
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  234 (291)
                      .||.|.|+|++++.+||+++|||++..+...     ...++...+...+..+.+..       ....+++|++|.|+|.+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998766321     23455533222234443321       12468999999998854


Q ss_pred             HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhh
Q 022840          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                      ++ .++.++++++|+++..+|..++..+.+.+||+||+|+.|||.-..+..+
T Consensus        69 ~v-~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          69 DI-GKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             HH-HHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceec
Confidence            33 3344555999999988888766556788999999999999987655443

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.69  E-value=1.1e-15  Score=113.00  Aligned_cols=116  Identities=22%  Similarity=0.238  Sum_probs=81.1

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      +++++.|+.|.|+|++++++||+++|||++....   + .  ..++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEED---D-D--RIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccC---C-C--eEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            4789999999999999999999999999986432   1 1  33443211112222333221       12368899999


Q ss_pred             E---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 T---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |   +|+++++++|+++|+++...|.....+....+|+.||+||.||++...
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            9   479999999999999876553333333223588999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.69  E-value=4e-16  Score=116.48  Aligned_cols=119  Identities=23%  Similarity=0.360  Sum_probs=84.5

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce-e---e--ccCcceeEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-E---Y--TKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~---~--~~~~g~~hi  226 (291)
                      ++.|+.+.|+|++++.+||+++|||++.......+......++..+    ...++|....+.. +   +  ..+.|+.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999986543222223455555533    3456665432211 1   0  124578899


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCEeecC-CcccCCCCceEEEE--ECCCCceEEEec
Q 022840          227 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~DP~G~~iel~~  280 (291)
                      +|.|+|++++.++|    +++|+++..+ |...++ +.+..|+  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999999    9999999875 433333 3455666  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.68  E-value=1.7e-15  Score=110.75  Aligned_cols=114  Identities=24%  Similarity=0.265  Sum_probs=81.7

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCH
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~  103 (291)
                      +.|++|.|+|++++++||+++||+++..... ...  ...++..++ .  ..+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~-~--~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGG-G--AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCC-c--cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999865432 112  234444332 1  122222221111  1233567899999999


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          104 YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      ++++++|+++|+++..+|...+++.. .++|+||+||.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVGR-FAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcEE-EEEEECCCCCEEEeEC
Confidence            99999999999998888877665544 5889999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.68  E-value=2.1e-15  Score=112.00  Aligned_cols=113  Identities=17%  Similarity=0.240  Sum_probs=81.2

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |.++++|+.|.|+|++++++||+++|||+.....    +.  ..++..++   ...+.+....      ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GP--FAVVKLDN---GVSLDFAQPD------GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CC--EEEEEcCC---CcEEEEecCC------CCCCcceEEEE
Confidence            4688999999999999999999999999886521    11  22333222   2334443321      11246799998


Q ss_pred             EC--CHHHHHHHHHHcCCeeecCCccC-------CCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TE--DVYKMVENIRAKGGNVTREPGPL-------KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~-------~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++  |+++++++|.++|+++...|...       .+|.+ .+||+||+||.|||++.+
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGR-GVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCee-EEEEECCCCCEEEEEecc
Confidence            86  69999999999999986655443       24444 488999999999999863

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=2.4e-15  Score=116.93  Aligned_cols=118  Identities=23%  Similarity=0.327  Sum_probs=79.3

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++|+||+|.|+|++++++||+++|||++......+.+.....++..+...  ..+.+...       .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~--~~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGV--HDTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCc--ceEEEecC-------CCCceeEEEEEcC
Confidence            68999999999999999999999999986543322222233445432222  12322221       2347889999998


Q ss_pred             C---HHHHHHHHHHcCCee--ecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          102 D---VYKMVENIRAKGGNV--TREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+..  ...|.....+...++||+||+||.|||+...
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            6   778889999999863  2233222212223588999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.68  E-value=9e-16  Score=118.43  Aligned_cols=123  Identities=18%  Similarity=0.178  Sum_probs=88.5

Q ss_pred             CCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc---ccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEE
Q 022840          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       150 ~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++..+....   .....+.++..++.  +..+.+...      ....++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcC------CCCceeEEE
Confidence            3578999999999999999999999999976543221   11234555654322  333444321      123688999


Q ss_pred             EEEecchHH---HHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          227 AISTDDVYK---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 ~~~v~d~~~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +|.|+|.++   +.++|    +++|+++..+|..++..+.+++|++||+|+.|||......
T Consensus        78 af~V~d~~~l~~~~~~L----~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  134 (154)
T cd07237          78 MLEVTSLDDVGRAYDRV----RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRT  134 (154)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceE
Confidence            999987554   55555    9999999888876665567889999999999999875443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.68  E-value=2.7e-15  Score=115.90  Aligned_cols=117  Identities=17%  Similarity=0.175  Sum_probs=81.9

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-ccCCCCceEEEEEEC
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATE  101 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~g~~~i~~~v~  101 (291)
                      +++||+|.|+|++++.+||+++|||++..+..   +  ...++..+. ..+..+.+........ .....++.||+|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            57999999999999999999999999875432   1  233333221 1234566655322221 122346889999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          102 D---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+.+.. +....  ....+||+||+|+.|||+...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-ccccc--cEEEEEEECCCCcEEEEEECC
Confidence            8   89999999999997542 22222  233589999999999999875

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.68  E-value=9.5e-16  Score=113.61  Aligned_cols=116  Identities=22%  Similarity=0.180  Sum_probs=81.1

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.....  ++  .. ++...+...+..+.+..       ...+++.|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~~-~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--RV-YLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--eE-EEEccCCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            3578999999999999999999999999865532  11  12 22221111233444421       1235789999999


Q ss_pred             c---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          231 D---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      .   |++++.+++    +++|+++...|.......++.+||+||+|+.|||.+..
T Consensus        70 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            7   566666666    99999988765433332357899999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=3.1e-15  Score=112.32  Aligned_cols=115  Identities=25%  Similarity=0.357  Sum_probs=84.4

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHH
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~  104 (291)
                      +||.|.|+|++++++||+++||+++......+ +.....|+..++.  ...+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            59999999999999999999999987654432 2234667765432  2234443321      1447899999999875


Q ss_pred             ---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          105 ---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       105 ---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                         +++++|.++|+++..++...+.+...+++|+||+|+.|||.+..
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence               78899999999987766554544344578999999999999765

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.67  E-value=1e-15  Score=118.98  Aligned_cols=122  Identities=20%  Similarity=0.220  Sum_probs=80.4

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      |.++.|+.|.|+|++++.+||+++|||++.......++.....++...+.  ...+.+..       ..++++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEec-------CCCCceeEEEEEc
Confidence            57899999999999999999999999998654332222223344442221  23343322       1245789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCE--eecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          231 DDVYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +|.+++ ..+.++|+++|+.  +..+|..+...+.+++||+||+|+.|||+...
T Consensus        72 ~~~~~v-~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHNI-IRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHHH-HHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            873332 2233444999986  33445443333457899999999999998643

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=1.1e-15  Score=113.33  Aligned_cols=120  Identities=23%  Similarity=0.274  Sum_probs=84.1

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-cceeeeeeccccCCceeEEEEeeecCc--e-eeccCcceeEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGV--T-EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-~~~~~~g~~hi~  227 (291)
                      .++.|+++.|.|++++.+||+++|||++.......+ ..+.+ .+...+   +..+++......  . ....+.|+.|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            368999999999999999999999999875432222 11222 222111   344555432221  1 112345889999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      |.|+|++++.+++    +++|+++...+... ..+.+++|++||+|+.|||+|
T Consensus        78 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~-~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHL----KAKGVEVEPIRVDE-FTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccC-CCceEEEEEECCCCCEEEecC
Confidence            9999999999999    99999987765432 334678999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.67  E-value=2.7e-15  Score=114.32  Aligned_cols=113  Identities=19%  Similarity=0.392  Sum_probs=82.3

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      .+++||.|.|+|++++++||+++|||++.....  .   ...|+..+....  .+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECC
Confidence            489999999999999999999999999864321  1   245666543322  2333221       1247889999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          102 DVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |++++.   ++|+++|+++...+.....+...++||+||+||.|||++..
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            887775   89999999987655443333334578999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.67  E-value=4.1e-15  Score=109.14  Aligned_cols=111  Identities=24%  Similarity=0.415  Sum_probs=84.0

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++++|+.|.|+|++++++||+++|||++.....      ...++..+. .....+.+....       ..+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeCC-------CCCceeEEEEcC
Confidence            589999999999999999999999999876532      145665542 223334443321       236789999997


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          102 ---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                         ++++++++|+++|+++...+...+++.. .++|.||+||.+|++..
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGR-GLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCce-EEEEECCCCCEEEEEEc
Confidence               6889999999999998777654555444 47899999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=2.5e-15  Score=111.64  Aligned_cols=120  Identities=20%  Similarity=0.249  Sum_probs=81.0

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC-CeeEEEeccCCCCcceEEEEeecCCCCc--ccCCCCceEEEEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~g~~~i~~~   99 (291)
                      +|+||+|.|+|++++++||+++|||++.......+. .....++..........+++........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998766543221 1223344322111223455554322211  1223367899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      |+   ++++++++++++|+++..++..  ++.. .+||+||+|+.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH--FGER-SIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee--cceE-EEEEECCCCCEEEeC
Confidence            98   5799999999999987654332  3333 478999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=6.9e-15  Score=109.35  Aligned_cols=117  Identities=24%  Similarity=0.365  Sum_probs=83.9

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC-CcccCCCCceEEEEEE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSYDIGTGFGHLAIAT  100 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~g~~~i~~~v  100 (291)
                      ++|+||+|.|+|++++.+||+++|||++....   +   ..+++..++  ....+.+...... .......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~---~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D---STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C---CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            68999999999999999999999999997652   1   145555432  2334555443322 1223445788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          101 E---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +   ++++++++|.++|+++..+ .....+  ..+||+||+||++||....+
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~~~~--~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDHLVS--EALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccccce--eEEEEECCCCCEEEEEEecC
Confidence            7   4899999999999987543 222222  34789999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2.7e-15  Score=110.25  Aligned_cols=117  Identities=24%  Similarity=0.298  Sum_probs=82.6

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCC--cccCCCCceEEEEEECCH
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--SYDIGTGFGHLAIATEDV  103 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~g~~~i~~~v~d~  103 (291)
                      ||+|.|+|++++.+||+++|||++.......+ ....+.+.... .....+.+.......  ....+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPG-SPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCC-CCeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999976643222 22233333221 113445554333221  112344678999999999


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          104 YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      ++++++|+++|+++..++....++  ..++++||+|+.|+|++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYG--TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCc--eEEEEECCCCCEEEEeC
Confidence            999999999999988777444443  34789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.67  E-value=3.5e-15  Score=111.21  Aligned_cols=113  Identities=17%  Similarity=0.210  Sum_probs=77.1

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhc---CCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECF---GMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      |+.+++||+|.|+|++++++||+++|   |++......         + .  .+.  ..+.+......  .....|..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~-~--~g~--~~l~l~~~~~~--~~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------Y-S--TGE--SEIYFKEVDEE--IVRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------e-e--CCC--eeEEEecCCcc--ccCCCCceeE
Confidence            67889999999999999999999966   666532111         1 1  111  11212111110  0123467899


Q ss_pred             EEEE---CCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIAT---EDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ||.|   +++++++++|+++|+++..+|...+.  .+...++|+|||||.|||...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   78999999999999998777655431  2223478999999999998764

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.66  E-value=3.1e-15  Score=111.51  Aligned_cols=119  Identities=27%  Similarity=0.470  Sum_probs=84.0

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC-CCCeeEEEeccCCCCcceEEEEeecCCC-Cc-----ccCCCCceEE
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSYFVVELTYNYGV-TS-----YDIGTGFGHL   96 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~-----~~~~~g~~~i   96 (291)
                      |+||+|.|+|++++.+||+++|||++....... ......+++..+    ...+++...... ..     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987654332 233445666542    334555443221 11     1346788999


Q ss_pred             EEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCC--CcEEEEEE
Q 022840           97 AIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD--GYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~--G~~iel~~  146 (291)
                      +|.|+|+++++++|+++|+++..++.....++..+.++.+|+  |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999998877753333334434444455  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=6.3e-15  Score=109.14  Aligned_cols=116  Identities=22%  Similarity=0.245  Sum_probs=83.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc----ccCCCCceEEEEEEC
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----YDIGTGFGHLAIATE  101 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~----~~~~~g~~~i~~~v~  101 (291)
                      +..|.|+|++++++||+++|||++......+++......+..+  ...+  .+........    .....+..+++|.|+
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~--~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   77 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG--DGGV--MVGSVRDDYRASSARAGGAGTQGVYVVVD   77 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC--CEEE--EEecCCCcccccccccCCCceEEEEEEEC
Confidence            3568999999999999999999997654333333334445543  2222  2322111111    123345678999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |+++++++|+++|+++..++...++|... ++++||+||.|+|.+
T Consensus        78 d~d~~~~~l~~~G~~v~~~~~~~~~g~~~-~~~~DPdG~~~~l~~  121 (122)
T cd08355          78 DVDAHYERARAAGAEILREPTDTPYGSRE-FTARDPEGNLWTFGT  121 (122)
T ss_pred             CHHHHHHHHHHCCCEEeeCccccCCCcEE-EEEECCCCCEEEEec
Confidence            99999999999999999888888877654 789999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.66  E-value=3.3e-15  Score=110.41  Aligned_cols=113  Identities=16%  Similarity=0.210  Sum_probs=80.5

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      .+|.||+|.|+|++++.+||+++|||++..+.   ..  ...++..++.  .+.+.+....       ..+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRP---ED--GALYLRMDDR--AWRIAVHPGE-------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCC---CC--CeEEEEccCC--ceEEEEEeCC-------CCceeEEEEEEC
Confidence            37899999999999999999999999875431   11  1445554322  3444444321       236789999996


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCcEEEEEEcC
Q 022840          102 ---DVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                         |+++++++|+++|+++...+...  ..+...++||+|||||.||++...
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               48899999999999987544211  222223589999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=5.3e-15  Score=109.92  Aligned_cols=116  Identities=22%  Similarity=0.312  Sum_probs=79.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEee---cC---C--CCcccCCCCceE
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY---NY---G--VTSYDIGTGFGH   95 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~---~~---~--~~~~~~~~g~~~   95 (291)
                      +.|+.|.|+|++++.+||+++|||++.....  .+.+  ..+..+  ...+.+....   ..   .  ........+..+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            4799999999999999999999999864322  1111  112211  1111121111   00   0  011111224468


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      ++|.|+|+++++++++++|+++..++...++|... ++++||+||.|+|.+
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~~~~~~  124 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTV-AYVRDINGFLIELCS  124 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEE-EEEECCCCCEEEEec
Confidence            99999999999999999999988888878887654 789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.65  E-value=3.3e-15  Score=109.25  Aligned_cols=114  Identities=25%  Similarity=0.238  Sum_probs=83.2

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      +.|+.|.|+|++++.+||+++||+++..... ....+  .++..++   ...+.+.......  ....+..|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999865442 12223  3333322   1223333322111  1234568999999999


Q ss_pred             HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++..+++    .++|+++..+|...++ +++.++++||+|+.|+|+|
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999999    9999999998877664 4689999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.65  E-value=9.1e-15  Score=106.82  Aligned_cols=110  Identities=19%  Similarity=0.275  Sum_probs=79.1

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++++|+.|.|+|++++++||++ |||++..+.   ++   ..|+..+. .....+.....       ...++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~---~~---~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAART---DD---ELYYRGYG-TDPFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEec---CC---eEEEecCC-CccEEEEcccC-------CcCcccEEEEEE
Confidence            57899999999999999999999 999886542   11   34554322 22222221111       124678999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +|.+++.+.+++.|......+. .+++.. +++|+||+||.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGGGK-RVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCCce-EEEEECCCCCEEEEEec
Confidence            9999999999999998665432 344444 58999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.65  E-value=3.3e-15  Score=113.30  Aligned_cols=116  Identities=24%  Similarity=0.297  Sum_probs=84.1

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++||+++..+..      ...++..+    +..+.+.............++.|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            468999999999999999999999999865421      22334432    34454433222111112346789999997


Q ss_pred             --chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                        |++++++++    +++|+++...|...+. +++.+||+||+|+.|||.+..
T Consensus        73 ~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         73 EEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence              788888888    9999998877765544 468999999999999998743

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=2.9e-15  Score=108.98  Aligned_cols=113  Identities=25%  Similarity=0.312  Sum_probs=80.2

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-ccCCCCceEEEEEECC
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATED  102 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~g~~~i~~~v~d  102 (291)
                      |+|++|.|+|++++++||+++|||++.......   ....++..++.   ..+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            589999999999999999999999876543221   12455554432   2344443222211 1223467899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEE
Q 022840          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel  144 (291)
                      +++++++++++|+++..++.. .++.. .+++.||+|+.+||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~~~-~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDGVR-QLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCCcc-EEEEECCCCCEEeC
Confidence            999999999999998776654 23333 47899999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.7e-14  Score=106.57  Aligned_cols=116  Identities=22%  Similarity=0.237  Sum_probs=84.3

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC--CcccCCCCceEEEEEECCHH
Q 022840           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        27 v~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~~~~~~g~~~i~~~v~d~~  104 (291)
                      +.|.|+|++++.+||+++|||++......+++......+..++  .  .+.+......  .....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD--S--VLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC--E--EEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            5689999999999999999999887654344443444455432  2  2334322111  01123345679999999999


Q ss_pred             HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          105 KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      ++++++.++|+++..++...++|.+ .++++||+|+.|+|.+.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWGDR-YGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccccce-EEEEECCCCCEEEEecC
Confidence            9999999999999888877777765 48899999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.64  E-value=7.6e-15  Score=111.33  Aligned_cols=113  Identities=19%  Similarity=0.227  Sum_probs=81.3

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCH-
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDV-  103 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~-  103 (291)
                      .||+|.|+|++++.+||+++|||++..+...     ...|+...+......+.+..       ....++.||+|.|+|+ 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998754321     25666543222222232211       1234899999999764 


Q ss_pred             --HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          104 --YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       104 --~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                        +++.++|.++|+++...|...+.+...++||+||+|+.|||.....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence              5779999999999876666554444446899999999999987653

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1e-14  Score=107.43  Aligned_cols=112  Identities=20%  Similarity=0.214  Sum_probs=79.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCC----cccCCCCceEEEEEEC
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT----SYDIGTGFGHLAIATE  101 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~----~~~~~~g~~~i~~~v~  101 (291)
                      ++.|.|+|++++.+||+++|||++....    ..  ...+..++.  .+.+.+.......    .........|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DW--YVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----Cc--EEEEecCCC--ceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            6789999999999999999999987541    11  333433221  2344443221111    0111112348999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |+++++++|.++|+++..++...++|.+. ++++||+|+.|||+|
T Consensus        76 did~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERLKAEGLPIVLPLRDEPWGQRH-FIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHHHhcCCCeeeccccCCCcceE-EEEECCCCCEEEEEC
Confidence            99999999999999988777777776554 789999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.64  E-value=1.2e-14  Score=107.18  Aligned_cols=113  Identities=21%  Similarity=0.306  Sum_probs=81.3

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +.+|+|+.|.|+|++++++||+++|||++.....      ...++..+. .....+.+...       ...+..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATG-SEHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCC-CccEEEEeccC-------CCCCCceEEEEe
Confidence            4689999999999999999999999999865422      134554332 22223333211       123568999999


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCcc--CCCCceEEEEEECCCCcEEEEEEcC
Q 022840          101 ---EDVYKMVENIRAKGGNVTREPGP--LKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                         +++++++++|+++|+++..++..  .+++.. .++|+||+||.|||+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGY-GFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCce-EEEEECCCCCEEEEEecc
Confidence               56899999999999998766533  234433 478999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=2.1e-14  Score=107.19  Aligned_cols=116  Identities=22%  Similarity=0.324  Sum_probs=81.9

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhc---CCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc---ccCCCCceEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECF---GMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS---YDIGTGFGHL   96 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~---~~~~~g~~~i   96 (291)
                      +|+||.|.|+|++++.+||+++|   ||++.....  ..   ..|+.. ..  ...+.+.......+   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~-~~--~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG-DG--GTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec-CC--ceEEEEEecccCCCcccccCCcCeeEE
Confidence            57999999999999999999999   999876531  11   233322 11  23455554332221   1234578899


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCcEEEEEE
Q 022840           97 AIATE---DVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      +|.|+   |+++++++|+++|+++...+...  ..+....+||+||+||++||+.
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            99997   48899999999999988766542  1222334789999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.63  E-value=1.6e-15  Score=112.94  Aligned_cols=120  Identities=24%  Similarity=0.241  Sum_probs=79.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccC--cccceeeeeeccccCCceeEEEEeeecCceeecc---CcceeEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDS--PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK---GNAYAQVA  227 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~g~~hi~  227 (291)
                      +|+|+++.|+|++++.+||+++|||++......  ........++..+.  ....+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            478999999999999999999999998877651  22233444555332  233333322222111111   01335566


Q ss_pred             EEec---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEE
Q 022840          228 ISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       228 ~~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel  278 (291)
                      +.+.   |++++.++|    ++.|+++..+|..........+|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            6555   555666666    9999999999877766555567899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=4.4e-15  Score=109.09  Aligned_cols=117  Identities=23%  Similarity=0.313  Sum_probs=84.1

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee--eccCcceeEEEEEecch
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDDV  233 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~v~d~  233 (291)
                      |+.+.|.|++++.+||.++|||++..+.....+ .....+...+. ....+.+........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGG-FRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCC-cEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            789999999999999999999998866432222 23333432221 134455543322211  12345778999999999


Q ss_pred             HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +++.+++    .++|+++..+|...+  .++.+|++||+|+.|||+|
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            9999999    999999998874433  3689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.63  E-value=3.3e-14  Score=107.07  Aligned_cols=120  Identities=23%  Similarity=0.372  Sum_probs=82.4

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d  102 (291)
                      +|+||+|.|+|++++++||+++|||++......    ....++..+. .....+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998754321    1245555431 11233444433222111234478899999987


Q ss_pred             HH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840          103 VY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       103 ~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      ++   +++++|.++|+++...+.  .++.. .++++||+||.|||+...+.
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~--~~~~~-~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD--HGNAW-SIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC--CCcee-EEEEECCCCCEEEEEEcCCC
Confidence            55   588999999998765432  22223 47899999999999977643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.63  E-value=1.5e-14  Score=120.08  Aligned_cols=227  Identities=17%  Similarity=0.228  Sum_probs=145.9

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcc--cCCCCceEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY--DIGTGFGHLA   97 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~g~~~i~   97 (291)
                      -.+++++|.+.|.|.+.+..=|-..|||+...+.-...    ...++.|  +..+++.-........+  .+|++.+.++
T Consensus        19 ~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk~----v~l~rQG--dinlvvn~~~~s~a~~f~~~Hgps~~a~a   92 (363)
T COG3185          19 GTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSKA----VTLYRQG--DINLVVNAEPDSFAAEFLDKHGPSACAMA   92 (363)
T ss_pred             CCCceeEEEEecCCHHHHHHHHHHHhCccccccccccc----eeEEEeC--CEEEEEcCCCcchhhHHHHhcCCchheeE
Confidence            38999999999999954444445559998876433221    2233322  33333322211111121  3788999999


Q ss_pred             EEECCHHHHHHHHHHcCCeeecCCcc-----CC---CCceEEEEEECCCC-cE-E--EEEEcC----CC---CCCceEEE
Q 022840           98 IATEDVYKMVENIRAKGGNVTREPGP-----LK---GMTTHFAFVKDPDG-YI-F--ELIQRG----PT---PEPLCQVM  158 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~-----~~---~g~~~~~~~~DP~G-~~-i--el~~~~----~~---~~~~~~v~  158 (291)
                      |.|+|...++++.++.|++....+..     .+   +-.+..+||.|..| .- +  ++....    ..   ...|+|++
T Consensus        93 ~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDHl~  172 (363)
T COG3185          93 FRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDHLT  172 (363)
T ss_pred             EeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeechhh
Confidence            99999999999999999953322221     11   11223577877773 11 1  111111    11   23689999


Q ss_pred             eeeC--CccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-------eccCcceeEEEEE
Q 022840          159 LRVG--DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-------YTKGNAYAQVAIS  229 (291)
Q Consensus       159 l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~g~~hi~~~  229 (291)
                      .+|.  .++.+..||+++|||+.....+.++..-.+..-....+++...|.|..+.+..+       ...|.|++||+|.
T Consensus       173 ~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQHIA~~  252 (363)
T COG3185         173 HNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQHIAFG  252 (363)
T ss_pred             hhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcceEEEec
Confidence            8886  799999999999999988776654421111112222344567777665444332       2256799999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCc
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ++||.+.++++    +++|+.++..|.
T Consensus       253 T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         253 TDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             ccHHHHHHHHH----HHcCCccCCCch
Confidence            99999999999    999999998874

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.62  E-value=8.2e-15  Score=111.68  Aligned_cols=119  Identities=18%  Similarity=0.296  Sum_probs=84.4

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      +.++.|+.|.|.|++++.+||+++|||++......     ...++..+..  ...+.+...       ..+++.|++|.|
T Consensus         2 ~~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~-----~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v   67 (144)
T cd07239           2 PVKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLGD-----QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEM   67 (144)
T ss_pred             CceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeCC-----eEEEEECCCC--cceEEEccC-------CCCceEEEEEEC
Confidence            35789999999999999999999999997644211     2344554332  334444321       135788999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +|++++.+ +.++++++|+++..+|........+++||+||+|+.|||++....
T Consensus        68 ~d~~~l~~-~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~  120 (144)
T cd07239          68 PSIDEVMR-GIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQ  120 (144)
T ss_pred             CCHHHHHH-HHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceE
Confidence            99777652 224449999999877654433345778999999999999986543

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.62  E-value=8.4e-15  Score=109.18  Aligned_cols=118  Identities=24%  Similarity=0.376  Sum_probs=86.2

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCc-ccceeeeeeccccCCceeEEEEeeecCce-e-----eccCcceeEE
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSYGVT-E-----YTKGNAYAQV  226 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-----~~~~~g~~hi  226 (291)
                      +.|+.|.|+|++++.+||+++|||++....... ++.....++..+    +..+++..+.... +     ...++|..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987655432 223445566642    4566666543221 1     1245788999


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCC---CceEEEec
Q 022840          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD---GWKTVLVD  280 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~---G~~iel~~  280 (291)
                      +|.|+|++++++++    .++|+++..+|..... +++.+++.||+   |+.|||+|
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGA-GGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccC-CCCEEEEEecCCCceEEEEecC
Confidence            99999999999999    9999999988764444 34555555555   99999986

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.62  E-value=5.5e-15  Score=110.90  Aligned_cols=114  Identities=23%  Similarity=0.272  Sum_probs=79.4

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc-
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD-  232 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d-  232 (291)
                      |.||.+.|+|++++.+||+++|||++.....      ...++..+    +..+.+.............++.|++|.+++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            5799999999999999999999999764321      11223332    345555332221111123477899999975 


Q ss_pred             -hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          233 -VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 -~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                       ++++++++    +++|+++..++....+ +++.+||+||+|+.|||.+..
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCc
Confidence             66776776    9999998755543333 468899999999999998854

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.62  E-value=8.9e-15  Score=114.25  Aligned_cols=120  Identities=21%  Similarity=0.193  Sum_probs=82.7

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|++|.|+|++++.+||+++|||++........+.....++...+.  ...+.+.....    ....+++|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTRDPA----GARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEecCCC----CCCCCceEEEEECC
Confidence            4689999999999999999999999998765433222222344543221  23343322111    12346899999998


Q ss_pred             chH---HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          232 DVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      |.+   ++.++|    ++.|+++..+|........+++|++||+|+.|||++.
T Consensus        79 ~~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIF----LENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHH----HHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            754   455555    9999998877765544334579999999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.62  E-value=1e-14  Score=112.72  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=81.4

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-eccCcceeEEEEEecc
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v~d  232 (291)
                      ++|+.+.|+|++++.+||+++|||++..+..   +  .+.+...+. ..+..+.+........ .....++.|++|.|+|
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d   75 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPD   75 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECCC
Confidence            6899999999999999999999999876543   1  222333211 2246677655322211 2233578999999998


Q ss_pred             ---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          233 ---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                         ++++.++|    +++|+++. .+....  ..+++||+||+|+.|||+...
T Consensus        76 ~~dvd~~~~~L----~~~Gv~~~-~~~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          76 DEELEAWKERL----EALGLPVS-GIVDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             HHHHHHHHHHH----HHCCCCcc-cccccc--cEEEEEEECCCCcEEEEEECC
Confidence               66677777    99999864 333332  357899999999999999854

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.62  E-value=1.5e-14  Score=104.59  Aligned_cols=108  Identities=22%  Similarity=0.265  Sum_probs=75.1

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHHHHH
Q 022840           29 YRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVE  108 (291)
Q Consensus        29 l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~~  108 (291)
                      |.|+|++++++||+++|||++.....    .  ...+..+..-..-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----D--YVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----S--EEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----C--eEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999987322    1  233332211000112222211  112234577899999999999999


Q ss_pred             HHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          109 NIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       109 ~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      +|+++|+++..+|...++|.. .+++.||+||.|+|+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWGQR-SFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTSEE-EEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCCeE-EEEEECCCCCEEEeC
Confidence            999999998888888777755 488999999999985

...

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.61  E-value=1.3e-14  Score=107.25  Aligned_cols=111  Identities=20%  Similarity=0.229  Sum_probs=77.3

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.+.|+|++++.+||+++||+++..+.+      ...++...+......+.+..       ...+++.|++|.|+
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~-------~~~~~~~h~af~v~   71 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTE-------SPEAGLGHIAWRAS   71 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEee-------CCCCceEEEEEEcC
Confidence            568999999999999999999999999876532      12334322222234444432       12458899999998


Q ss_pred             c---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +   ++++.+++    +++|+++...+.. ++ .+..+||+||+|+.||+...
T Consensus        72 ~~~~v~~~~~~l----~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          72 SPEALERRVAAL----EASGLGIGWIEGD-PG-HGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCccccccCC-CC-CcceEEEECCCCCEEEEEEe
Confidence            5   45555555    9999987543322 22 35689999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.61  E-value=2.5e-14  Score=122.83  Aligned_cols=121  Identities=17%  Similarity=0.243  Sum_probs=83.7

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCe-eEEEeccCCCCcceEEEEeecCCCCcccCCCC-ce
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY-SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTG-FG   94 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g-~~   94 (291)
                      +.+.+++|+||+|.|+|++++.+||+++|||++......+++.. ...|+..+....  .+.+...       .+.| +.
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~~g~~~  209 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAH--DIAFVGD-------PEPGKLH  209 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCc--ccceecC-------CCCCceE
Confidence            34568999999999999999999999999999865543333321 344554332111  1211111       1234 88


Q ss_pred             EEEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           95 HLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        95 ~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |+||.|+|   +++++++|+++|+++..+|.....+...++||+||+||.|||..
T Consensus       210 Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       210 HVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            99999986   55578899999999876665443222336899999999999983

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=3.9e-14  Score=103.23  Aligned_cols=109  Identities=19%  Similarity=0.241  Sum_probs=78.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHH
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      +..|.|+|++++++||+++|||++...    .+  ...++..+. .....+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            457899999999999999999997532    11  123333222 2233344432211     12245699999999999


Q ss_pred             HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          106 MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      ++++|+++|+++..++...++|.+. +++.||+||.|+|.+.
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPWGVRR-FFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCCceEE-EEEECCCCCEEEEEEc
Confidence            9999999999988877776776554 7899999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.61  E-value=2e-14  Score=104.84  Aligned_cols=109  Identities=23%  Similarity=0.404  Sum_probs=75.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE--CCH
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT--EDV  103 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v--~d~  103 (291)
                      ||.|.|+|++++++||+++|||++.....  .    ..++..+    ...+.+.......  ..+.+..|++|.|  +|+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999865431  1    3344432    1233333222111  1234678999999  479


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          104 YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +++++++.++|+++........++.. .+|++||+|+.|||+..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGR-SIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCce-EEEEECCCCCEEEEEeC
Confidence            99999999999997643332222233 47899999999999854

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.61  E-value=1.7e-14  Score=108.23  Aligned_cols=117  Identities=25%  Similarity=0.292  Sum_probs=84.3

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchH
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  234 (291)
                      +|+.+.|+|++++.+||+++||+++......+ +.....++..++.  +..+.+....      ..+++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            48999999999999999999999987554322 2234455554322  3344443311      1468899999999865


Q ss_pred             ---HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          235 ---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                         +.++++    .++|+++...|...+..+.++++|+||+|+.|||.+....
T Consensus        72 ~~~~~~~~l----~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          72 DILRAADRL----AANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             HHHHHHHHH----HHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence               455556    9999999887765554446789999999999999985543

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.1e-14  Score=105.44  Aligned_cols=115  Identities=20%  Similarity=0.203  Sum_probs=81.7

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee----eccCcceeEEEEEecc
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQVAISTDD  232 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hi~~~v~d  232 (291)
                      -.|.|+|++++.+||+++||+++.......++......+..+    ...+.+........    ....++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG----DGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC----CEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            468899999999999999999987655333332222233332    22333332221111    1123466899999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++++++++    .++|+++..+|...++ +.+.++++||+|+.|+|.+
T Consensus        79 ~d~~~~~l----~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERA----RAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHH----HHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            99999999    9999999998877665 4688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.60  E-value=2.7e-14  Score=105.66  Aligned_cols=109  Identities=26%  Similarity=0.399  Sum_probs=77.0

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE--
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT--  100 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v--  100 (291)
                      +|+|+.|.|+|++++.+||+++|||++.....  .    ..++..+  ..  .+.+......   ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~--~~--~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAG--DL--WLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecC--CE--EEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            57999999999999999999999999865422  1    2344433  22  2222221111   1234678999999  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|+++++++|+++|+++..++..  .+ . .+||+||+||.|||++..
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~~-~-~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--EG-D-SFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--Cc-c-EEEEECCCCCEEEEEeCC
Confidence            57999999999999987654332  22 2 478999999999999754

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=2.2e-14  Score=106.37  Aligned_cols=117  Identities=22%  Similarity=0.333  Sum_probs=82.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc---eeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~~  228 (291)
                      .++.|+.+.|+|++++.+||+++|||+.........  .  ..+..+    ...+.+......   .....++|..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~~--~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVG--R--KALRFG----SQKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccCC--c--eEEEeC----CEEEEEecCCCccCcCccCCCCCCceEEE
Confidence            358999999999999999999999999875532111  2  223322    134555432221   11223468899999


Q ss_pred             Eecc-hHHHHHHHHHHHHHhCCEeecCCcccCC--CCceEEEEECCCCceEEEec
Q 022840          229 STDD-VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~d-~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DP~G~~iel~~  280 (291)
                      .+++ ++++.+++    +++|+++..+|....+  ..++.+||+||+|+.||+++
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9975 88888888    9999999887765432  23578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=1.4e-14  Score=107.02  Aligned_cols=113  Identities=19%  Similarity=0.299  Sum_probs=79.5

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEee----ecCceeeccCcceeEEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAY----SYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~~~~~~~~g~~hi~~  228 (291)
                      ++.++.+.|.|++++.+||+++|||++......    . ..+..      ...+.+..    .....+...+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~----~-~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFGE----N-VTFEG------GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccCc----e-EEEec------cceeccchhhhccCCcccccccCCceEEEE
Confidence            578899999999999999999999997643211    1 11111      11111110    000111122345579999


Q ss_pred             EecchHHHHHHHHHHHHHhCC-EeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          229 STDDVYKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~-~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .|+|+++++++|    +++|+ ++..+|...++ +.+.++|+|||||.|||.+.
T Consensus        71 ~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            999999999999    99986 78888877665 56899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.59  E-value=2e-14  Score=106.83  Aligned_cols=119  Identities=18%  Similarity=0.230  Sum_probs=79.5

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCccc-ceeeeeeccccCCceeEEEEeeecCcee--eccCcceeEEEEEe
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~v  230 (291)
                      +.|+.|.|.|++++.+||+++|||++..+....+. .....++.......+..++|........  .....++.|++|.|
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~v   81 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFSV   81 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEEc
Confidence            68999999999999999999999998765432221 1112222211112244566655332211  11234678999999


Q ss_pred             cc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      +|   ++++.+++    +++|+++..++..   .+++.+||+||+|++|||+
T Consensus        82 ~~~~~~~~~~~~~----~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          82 PSEASLDAWRERL----RAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             CCHHHHHHHHHHH----HHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            85   45555555    9999998764433   2468899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.59  E-value=5.2e-14  Score=120.37  Aligned_cols=122  Identities=24%  Similarity=0.352  Sum_probs=84.7

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .+.+++++||+|.|+|++++.+||+++|||++........+.....++..+....  .+.+...       .+.+++|+|
T Consensus       131 ~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~Hia  201 (294)
T TIGR02295       131 GVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVH--DIALTNG-------NGPRLHHIA  201 (294)
T ss_pred             CccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcC--ceEeecC-------CCCceeeEE
Confidence            4568999999999999999999999999999875543333333344544322111  2222211       235789999


Q ss_pred             EEECC---HHHHHHHHHHcCCe--eecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           98 IATED---VYKMVENIRAKGGN--VTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~--~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |+|+|   ++++.++|+++|++  +...|.....+...++|++||+|+.|||+...
T Consensus       202 f~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       202 YWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            99998   55568899999987  54444433333334588999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.59  E-value=2.5e-14  Score=105.66  Aligned_cols=111  Identities=15%  Similarity=0.179  Sum_probs=78.6

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      ++.|++|.|+|++++.+||+++|||++..+...     ...++..++  .+..+.+...       ..++..|++|.+++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccC--CceEEEEEeC-------CCCceeEEEEEECC
Confidence            588999999999999999999999997654211     123344322  2445555321       13577899999975


Q ss_pred             ---hHHHHHHHHHHHHHhCCEeecCCccc--CCCCceEEEEECCCCceEEEecc
Q 022840          233 ---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                         +++..++|    +++|+++...|...  ....++++||+||||+.|||+.-
T Consensus        68 ~~dl~~~~~~l----~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          68 EAALDALAARL----RAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHH----HHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence               66666666    99999998755321  22234789999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=1.9e-14  Score=106.89  Aligned_cols=115  Identities=23%  Similarity=0.293  Sum_probs=78.9

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeec--------C--ceeeccCcce
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY--------G--VTEYTKGNAY  223 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--------~--~~~~~~~~g~  223 (291)
                      +.|+.+.|+|++++.+||+++|||++.......  .+..  +..+    ...+.+....        .  +......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~--~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG--DYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC--cEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            468999999999999999999999975432211  1211  1111    1122111100        0  0000112344


Q ss_pred             eEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       224 ~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .|++|.|+|++++++++    +++|+++..+|...++ +.+.++++||+|+.|||+++
T Consensus        73 ~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            68999999999999999    9999999988877665 46789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.59  E-value=4.1e-14  Score=106.16  Aligned_cols=117  Identities=16%  Similarity=0.205  Sum_probs=78.0

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccc-eeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK-CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..+.|+.+.|+|++++.+||+++||+++..+....... ....++..+    +..+.+......    ..+++.|++|.|
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~----~~~~~~Hiaf~v   74 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIMEGDSL----QERTYNHIAFKI   74 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEecCCCC----CCCCceEEEEEc
Confidence            36899999999999999999999999875543221100 000111111    245555432111    124689999999


Q ss_pred             c--chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +  +++++.++|    +++|+++..+. ......++.+||+||+|+.|||...
T Consensus        75 ~~~~ld~~~~~l----~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          75 SDSDVDEYTERI----KALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             CHHHHHHHHHHH----HHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecC
Confidence            7  566666666    99999876433 2233246899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.59  E-value=2e-14  Score=106.28  Aligned_cols=114  Identities=25%  Similarity=0.207  Sum_probs=79.4

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....  .    ..++..........+.+..       ...++..|++|.|.
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~-------~~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD--D----RIYLRGLEEFIHHSLVLTK-------APVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC--C----eEEEEecCCCceEEEEEee-------CCCCceeEEEEECC
Confidence            468999999999999999999999999865422  1    2233211111233344322       11357899999995


Q ss_pred             ---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                         |+++..+++    +++|+++...|.......++.+|+.||+|+.||+....
T Consensus        70 ~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          70 SEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence               566666666    99999987765443333357899999999999998643

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.59  E-value=8.9e-14  Score=101.12  Aligned_cols=110  Identities=25%  Similarity=0.359  Sum_probs=78.6

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHHH
Q 022840           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKM  106 (291)
Q Consensus        27 v~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~  106 (291)
                      ..|.|+|++++++||+++|||++.....  ..  ...++..+  .  ..+.+......... ...+..|++|.++|++++
T Consensus         2 ~~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~--~--~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~   72 (112)
T cd08349           2 PVLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG--G--AQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDAL   72 (112)
T ss_pred             CEEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC--C--EEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHH
Confidence            3689999999999999999999876532  11  23444432  2  33444433222111 234566899999999999


Q ss_pred             HHHHHHcCCe-eecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          107 VENIRAKGGN-VTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       107 ~~~l~~~G~~-~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      .++++++|+. +..++...+++.. .++++||+|+.|+|+|
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~DP~G~~ie~~~  112 (112)
T cd08349          73 YAELKAKGADLIVYPPEDQPWGMR-EFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHHcCCcceecCccCCCcccE-EEEEECCCCCEEEecC
Confidence            9999999998 5666666666644 4789999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=4.9e-14  Score=105.21  Aligned_cols=117  Identities=25%  Similarity=0.271  Sum_probs=83.2

Q ss_pred             CceEEEeeeCCccccHHHHHHhc---CCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee---eccCcceeEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi  226 (291)
                      +++||.+.|.|++++.+||+++|   ||++..+...   .  ..+...   ..+..+.+........   ...+.|+.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~---~--~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED---G--RSWRAG---DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc---C--ceEEec---CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   9998765321   1  122221   1245666655333211   1234678999


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCEeecCCccc--CCCCceEEEEECCCCceEEEecc
Q 022840          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +|.|.|   ++++.+++    +++|+++...+...  ...+.+.+|++||+|++|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999975   66666777    99999998877642  22346889999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=5.2e-14  Score=104.58  Aligned_cols=116  Identities=23%  Similarity=0.311  Sum_probs=80.9

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc-eeeccCcceeEEEEEec
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-TEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~g~~hi~~~v~  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++.....      ...++..++  ....+.+...... .......+..|++|.|.
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLP   73 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECC
Confidence            68999999999999999999999999876521      123444332  2455555443322 11223457899999998


Q ss_pred             c---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      +   ++++++++    +++|+++.. +...+.  .+.+|++||+|+.|||....+
T Consensus        74 ~~~~v~~~~~~l----~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          74 SRADLAAALRRL----IELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CHHHHHHHHHHH----HHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecC
Confidence            5   55555555    999998754 333333  478999999999999987543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.58  E-value=2.5e-14  Score=106.32  Aligned_cols=112  Identities=17%  Similarity=0.208  Sum_probs=79.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.+.|+|++++.+||+++|||++..+..      ...++..+.  .+..+.+...        .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            468999999999999999999999999865421      123455432  2344444321        145689999998


Q ss_pred             c---hHHHHHHHHHHHHHhCCEeecCCcccC--CCCceEEEEECCCCceEEEecchh
Q 022840          232 D---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |   ++++.+++    +++|+++..++....  ..+.+++||+||||+.||+..++.
T Consensus        69 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~  121 (124)
T cd08361          69 DDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPS  121 (124)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeee
Confidence            6   66666667    999999877654211  223567899999999999987653

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=5.1e-14  Score=104.07  Aligned_cols=115  Identities=21%  Similarity=0.224  Sum_probs=83.0

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--eeccCcceeEEEEEecchH
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hi~~~v~d~~  234 (291)
                      ..+.|.|++++.+||.++||+++.......++......+..+    +..+.+.......  +...+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            458899999999999999999987665433333333333332    2345554321110  1112346689999999999


Q ss_pred             HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++++++    .+.|+++..+|...++ +.+.++++||+|+.|+|.+
T Consensus        81 ~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARA----VAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHH----HHCCCeEecCcccccc-cceEEEEECCCCCEEEEec
Confidence            999999    9999999988875554 5689999999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.58  E-value=5.2e-14  Score=104.18  Aligned_cols=113  Identities=19%  Similarity=0.179  Sum_probs=76.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC-----CCcccCCCCceEEEE
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG-----VTSYDIGTGFGHLAI   98 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~~~~~g~~~i~~   98 (291)
                      ++||+|.|+|++++++||+. |||++......    .....+..+. .  ..+.+.....     ......+.+..+++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPG-G--VRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCC-C--EEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99987543211    1123333221 1  2232221110     011112234567888


Q ss_pred             EEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      .+.   |+++++++|+++|+++..+|...++|.+. ++|+||+||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRY-AIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEE-EEEECCCCCEEEEe
Confidence            774   89999999999999988888777777653 78999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=8.1e-14  Score=103.01  Aligned_cols=113  Identities=27%  Similarity=0.420  Sum_probs=78.8

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCC------cccCCCCceEEE
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT------SYDIGTGFGHLA   97 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~------~~~~~~g~~~i~   97 (291)
                      +.+|.|.|+|++++++||+++|||++..+   .++.  ..++..++. .  .+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGGR-G--MLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCCC-c--EEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999998753   1222  455555432 2  23333221111      111234778999


Q ss_pred             EEE--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           98 IAT--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |.+  +|++++++++.++|+++...+. ..++.. .++|+||+|+.||+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~~~-~~~~~DP~G~~ie~~~  121 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRGGR-SLYFRDPDGNLLELAT  121 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCCee-EEEEECCCCCEEEEec
Confidence            999  5799999999999998766544 233434 3789999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=2.2e-14  Score=104.26  Aligned_cols=113  Identities=25%  Similarity=0.178  Sum_probs=81.3

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-eccCcceeEEEEEecc
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v~d  232 (291)
                      |+|+++.|+|++++.+||+++||+.+..+.....   ...++..++   ...+.+........ .....+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            5799999999999999999999998765432221   223343322   12455544322211 1124577899999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEE
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel  278 (291)
                      ++++.+++    +++|+++..++..  ..+++.++++||+|+.|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            99999999    9999999887754  2346789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.57  E-value=4.2e-14  Score=104.94  Aligned_cols=111  Identities=17%  Similarity=0.205  Sum_probs=79.5

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.+.|+|++++.+||+++|||++....    +.+..  +..+.   +..+.+....      ...+..|++|.++
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~--~~~~~---~~~l~~~~~~------~~~~~~h~a~~v~   67 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAV--VKLDN---GVSLDFAQPD------GEIPPQHYAFLVS   67 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEE--EEcCC---CcEEEEecCC------CCCCcceEEEEeC
Confidence            35789999999999999999999999976532    11211  22111   3445543321      1235589999886


Q ss_pred             --chHHHHHHHHHHHHHhCCEeecCCccc------CCCCceEEEEECCCCceEEEecc
Q 022840          232 --DVYKSAEVVNLVTQELGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~------~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                        |+++..+++    .+.|+++...|...      ...+++.+||+||+|+.|||+++
T Consensus        68 ~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          68 EEEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence              578888888    99999987766543      12357899999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=1.2e-13  Score=102.37  Aligned_cols=114  Identities=23%  Similarity=0.251  Sum_probs=77.1

Q ss_pred             EEEEEEEeCCHHHHHHHHHHh---cCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           24 FLHAVYRVGDLDRTIKYYTEC---FGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~---lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      ++||.|.|+|++++++||+++   |||++....   .+.  .+.+.....  ...+.+........ ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~~--~~~~~~~~~--~~~~~l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GPG--AVGYGKGGG--GPDFWVTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CCc--eeEeccCCC--CceEEEeccccCCC-CCCCCceEEEEEC
Confidence            579999999999999999998   699876542   111  222332211  23344433222111 1222457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEE
Q 022840          101 ED---VYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~  145 (291)
                      ++   ++++++++.++|+.+..+|...++  .....+||+||+||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999998777765543  2222478999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.56  E-value=1.4e-13  Score=100.37  Aligned_cols=108  Identities=18%  Similarity=0.280  Sum_probs=72.7

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE--EE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA--IA   99 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~--~~   99 (291)
                      ++|+||.|.|+|++++++||+ .|||++....   + .  ..++..+.  ....+.+....       ..++.|++  +.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~-~--~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG---D-G--LELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C-c--eEEEecCC--CceEEEeecCC-------CCceeeEEEEeE
Confidence            478999999999999999998 6999986432   1 1  22222221  22223332221       12344544  45


Q ss_pred             ECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++|+++++++|+++|+++..++  ..++.. .+||.||+||.|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~~~~-~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGADPD-GVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcCCCC-EEEEECCCCCEEEEecCC
Confidence            5899999999999999987654  333333 378999999999998543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK06724 hypothetical protein; Provisional

Probab=99.56  E-value=4.7e-14  Score=105.11  Aligned_cols=110  Identities=18%  Similarity=0.228  Sum_probs=74.2

Q ss_pred             CCceEEEeeeCCccccHHHHHHhc---CCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  228 (291)
                      ..++|+.|.|+|++++.+||+++|   |++.....         .+ .  .  ....+.+......  .....|..|++|
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~-~--~--g~~~l~l~~~~~~--~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY-S--T--GESEIYFKEVDEE--IVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee-e--C--CCeeEEEecCCcc--ccCCCCceeEEE
Confidence            468999999999999999999966   56543211         11 1  0  0112222111010  012347789999


Q ss_pred             Ee---cchHHHHHHHHHHHHHhCCEeecCCcccCC--CCceEEEEECCCCceEEEecc
Q 022840          229 ST---DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .|   ++++++.+++    +++|+++..+|...+.  .+.+.+||+||||+.|||+..
T Consensus        70 ~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         70 QAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             ecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            98   5677777777    9999999888865442  234789999999999999865

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.56  E-value=6.6e-14  Score=101.56  Aligned_cols=120  Identities=28%  Similarity=0.365  Sum_probs=89.0

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      +..+.|..|.|+|++++++||.++|||...+..+.....+  ..+...+...+..+.  ....   ...+...+++.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y--~~f~~~~~~~gG~l~--~~~~---~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRY--AVFPADGAGAGGGLM--ARPG---SPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceE--EEEECCCccccceec--cCCc---CCCCCCCEEEEEec
Confidence            5678999999999999999999999999876644433333  333322211122221  1111   11225568999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +|+++.++++    .++|.+++.++...|+ .++.+.+.||.||+|.|.+..
T Consensus        80 ~did~~l~rv----~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERV----VAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHH----HhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            9999999999    9999999999998886 489999999999999998753

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.56  E-value=9.6e-14  Score=104.54  Aligned_cols=124  Identities=19%  Similarity=0.199  Sum_probs=82.6

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      ++.|+.+.|+|++++.+||+++|||++......    ....++..+. .....+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999997654321    1233444321 12345555443222111234578899999998


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                      ++.+. .++.++.++|+++..++. .+  .++.+|++||+|+.|||+...+.+
T Consensus        76 ~~~v~-~~~~~l~~~G~~~~~~~~-~~--~~~~~~~~DP~G~~ie~~~~~~~~  124 (134)
T cd08348          76 LDDLR-DLYERLRAAGITPVWPVD-HG--NAWSIYFRDPDGNRLELFVDTPWY  124 (134)
T ss_pred             HHHHH-HHHHHHHHCCCCccccCC-CC--ceeEEEEECCCCCEEEEEEcCCCC
Confidence            55422 222344999999876542 22  357899999999999999865544

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.56  E-value=1.5e-13  Score=99.10  Aligned_cols=112  Identities=31%  Similarity=0.410  Sum_probs=82.0

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHH
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      |+++.|+|++++.+||+++|||++......  ......++..+    ...+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            889999999999999999999998766432  12245555543    234555554332222345578899999999999


Q ss_pred             HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEE
Q 022840          106 MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel  144 (291)
                      ++++|.++|+.+..++....++.. .+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGR-VAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcE-EEEEECCCCcEEeC
Confidence            999999999988776653333333 47899999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=8.6e-14  Score=103.38  Aligned_cols=113  Identities=21%  Similarity=0.232  Sum_probs=76.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC------CCcc-cCCCCceEE
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG------VTSY-DIGTGFGHL   96 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~------~~~~-~~~~g~~~i   96 (291)
                      +.+|+|.|+|++++++||++ |||+.........    ..++..++   ...+.+.....      .... ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            36899999999999999987 8998764322211    22232221   22344432211      0000 122345689


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           97 AIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      +|.|+   ++++++++++++|+++..+|...+++ . .+||+|||||.|||+.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~-~-~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHGFM-Y-GRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCCce-E-EEEEECCCCCEEEEEE
Confidence            99997   58899999999999988877766653 2 3689999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1e-13  Score=102.98  Aligned_cols=113  Identities=21%  Similarity=0.291  Sum_probs=72.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC----Ccc-cCCCCceEEE--E
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV----TSY-DIGTGFGHLA--I   98 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~----~~~-~~~~g~~~i~--~   98 (291)
                      ||+|.|+|++++++||+++|||++.....    .  ...+..+  ...+.+.+......    ... ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999854311    1  2223222  22333333221100    000 1112445664  5


Q ss_pred             EECCHHHHHHHHHHcCCeeecCCccCCC---CceEEEEEECCCCcEEEEEE
Q 022840           99 ATEDVYKMVENIRAKGGNVTREPGPLKG---MTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~DP~G~~iel~~  146 (291)
                      .++|+++++++|+++|+++..+|.....   +....+||+|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            6689999999999999998876654221   11234889999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.55  E-value=1.8e-13  Score=101.05  Aligned_cols=108  Identities=20%  Similarity=0.189  Sum_probs=75.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHH
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      ...|.|+|++++++||++ |||++......     ...++..+    ...+.+......   .......+++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRG----DLELHFFAHPDL---DPATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcC----CEEEEEEecCcC---CCCCCcceEEEEeCCHHH
Confidence            468999999999999999 99998654321     13444432    224445433211   112234579999999999


Q ss_pred             HHHHHHHcCCeee-------cCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          106 MVENIRAKGGNVT-------REPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~-------~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      ++++|+++|+++.       .++...++|.+. ++|+||+||.|+|.+.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMRE-FALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeE-EEEECCCCCEEEeecC
Confidence            9999999999742       334444566554 8899999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=2.1e-13  Score=100.63  Aligned_cols=112  Identities=26%  Similarity=0.415  Sum_probs=76.8

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC--
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED--  102 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d--  102 (291)
                      .|+.|.|+|++++.+||+++||++.....   ++ . ..|.. ..  ..+.+.+......    ...+..|++|.|++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~---~~-~-~~~~~-~~--~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR---DD-Y-AKFLL-ED--PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc---CC-e-eEEEe-cC--CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            69999999999999999999999875432   11 1 22222 22  1233333322111    11478899999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCC-CCceEEEEEECCCCcEEEEEEcC
Q 022840          103 -VYKMVENIRAKGGNVTREPGPLK-GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                       +++++++|.++|+++..++.... ++....+|++||+||.|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999876554332 12223488999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.55  E-value=1.1e-13  Score=101.54  Aligned_cols=111  Identities=23%  Similarity=0.320  Sum_probs=80.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.+.|.|++++.+||+++|||++.....      ...++..+. ..+..+.+...       ...++.|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcC
Confidence            368999999999999999999999999876532      123444331 12344444331       1357899999998


Q ss_pred             c---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +   +++..+++    +++|+++...|...++ +++.+|++||+|+.||+...
T Consensus        67 ~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHL----EAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence            4   55555555    9999999887754444 46889999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.1e-13  Score=101.85  Aligned_cols=112  Identities=19%  Similarity=0.186  Sum_probs=79.2

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce-e----eccCcceeEEEEE
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-E----YTKGNAYAQVAIS  229 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~----~~~~~g~~hi~~~  229 (291)
                      .+..|.|+|++++.+||.++|||++.....    .+  ..+..++.  ...+.+....... +    ...+.+ .|++|.
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~   73 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFDSD----WY--VSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQG-LILNFE   73 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEeccC----cE--EEEecCCC--ceEEEEccCCCCCCcchhcccCCce-EEEEEE
Confidence            357899999999999999999999875421    11  22322221  2444443211110 0    112233 589999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      |+|++++.+++    .++|+++..+|...++ +.+.++++||+|+.|||+|
T Consensus        74 v~did~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          74 VDDVDAEYERL----KAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             ECCHHHHHHHH----HhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            99999999999    9999998888876655 4688999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=2.4e-13  Score=99.35  Aligned_cols=108  Identities=23%  Similarity=0.279  Sum_probs=77.3

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-ccCCCCceEEEEEECC---
Q 022840           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATED---  102 (291)
Q Consensus        27 v~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~g~~~i~~~v~d---  102 (291)
                      +.|.|+|++++++||+++|||++...    ...  ...+...+ .  ..+.+........ .....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~----~~~--~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVEL----SPT--FALFVLGS-G--VKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCC----CCc--eEEEEeCC-C--cEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            67999999999999999999997643    112  22333222 2  2344443332211 1233467899999975   


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      ++++++++.++|+++..++...++|.  .++|+||+||.||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~--~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGY--TFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCcc--EEEEECCCCCEEEee
Confidence            88999999999999988887777764  368999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.6e-13  Score=100.01  Aligned_cols=108  Identities=21%  Similarity=0.224  Sum_probs=78.6

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHH
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~  236 (291)
                      ..+.|+|++++.+||+++|||++....    +  ...++...+ ..+..+.+.....     .+....|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH----G--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC----C--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            468899999999999999999975321    1  122233222 1234455433211     123457999999999999


Q ss_pred             HHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          237 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .+++    ++.|+++..+|...++ +.+.+|++||+|+.|+|+++
T Consensus        72 ~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            9999    9999999888876554 45789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.54  E-value=1.7e-13  Score=100.09  Aligned_cols=108  Identities=17%  Similarity=0.243  Sum_probs=76.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.+.|+|++++.+||++ |||++..+..  +    ..++..++. ....+.+..       ...+++.|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~----~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D----ELYYRGYGT-DPFVYVARK-------GEKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C----eEEEecCCC-ccEEEEccc-------CCcCcccEEEEEEC
Confidence            3689999999999999999999 9999765431  1    123443222 222222111       11357889999999


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      |.+++.+.+    +..|.++...+. .++ +++.+||+||+|+.|||+.
T Consensus        67 ~~~~~~~~~----~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          67 SRADLEKAA----ALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CHHHHHHHH----HcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEe
Confidence            998888888    888998775443 333 4688999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.53  E-value=1.4e-13  Score=99.40  Aligned_cols=108  Identities=25%  Similarity=0.330  Sum_probs=75.1

Q ss_pred             eeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHHH
Q 022840          159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~  238 (291)
                      |.|+|++++.+||+++|||++....+.    ......+...  ......+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDPD----YVDFSLGFRF--HDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEETS----EEEEEETEEE--EEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCCC----eEEEEeccch--hhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            679999999999999999998873321    2222222100  011222222111  11234577999999999999999


Q ss_pred             HHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      ++    +++|+++..+|...++ +.+.+++.||+|+.|||+
T Consensus        73 ~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RL----KELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HH----HHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HH----HHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99    9999999998887666 468999999999999986

...

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.53  E-value=1.5e-13  Score=101.28  Aligned_cols=113  Identities=26%  Similarity=0.316  Sum_probs=78.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .+|.|+.|.|+|++++.+||+++|||++..+..    .+  .++..++. ....+.+..       ...+++.|++|.++
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS-EHHILRLRR-------SDRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC-ccEEEEecc-------CCCCCCceEEEEeC
Confidence            358999999999999999999999999765422    12  23332222 233333321       12346789999995


Q ss_pred             ---chHHHHHHHHHHHHHhCCEeecCCccc-CCCCceEEEEECCCCceEEEecch
Q 022840          232 ---DVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---d~~~~~~~l~~~~~~~G~~~~~~p~~~-~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                         ++++..+++    +++|+++..+|... ...+++.++|+||+|+.|||+...
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence               566666666    99999988776432 122467899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.53  E-value=3.1e-13  Score=115.13  Aligned_cols=119  Identities=21%  Similarity=0.336  Sum_probs=82.1

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC-C--eeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-K--YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~-~--~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ...+|+||+|.|+|++++.+||+++|||++........+ +  ....|+..++...  .+.+...      ....+++|+
T Consensus       139 ~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~l~~~------~~~~~~~Hi  210 (286)
T TIGR03213       139 GDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHH--SLAFAAG------PSEKRLNHL  210 (286)
T ss_pred             CCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcc--eEEEecC------CCCCceEEE
Confidence            367999999999999999999999999998654322111 1  1345665543222  2222211      123478999


Q ss_pred             EEEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           97 AIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +|.|+|+++   +.++|+++|+ ....+.....+...++||+||+|++||+...
T Consensus       211 af~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       211 MLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             EEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            999988776   7999999999 4444443333344468899999999999753

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.53  E-value=1.2e-13  Score=100.71  Aligned_cols=108  Identities=23%  Similarity=0.324  Sum_probs=74.1

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec--ch
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DV  233 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~--d~  233 (291)
                      |+.+.|+|++++.+||+++|||++..+...      ..++..+    ...+.+.......  ....+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~------~~~~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK------EAYFELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc------eeEEEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            789999999999999999999998654321      1222222    2445543322211  12346789999995  56


Q ss_pred             HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +++.+++    .++|+++...+...+ ..++.+|++||+|+.|||..
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccccC-CCceEEEEECCCCCEEEEEe
Confidence            6666666    999999865433222 23688999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.52  E-value=2.7e-13  Score=98.55  Aligned_cols=109  Identities=25%  Similarity=0.267  Sum_probs=78.7

Q ss_pred             EeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHH
Q 022840          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  237 (291)
                      .|.|+|++++.+||+++|||++.....  ..  ...++..+    +..+.+....+..+. ...+..|++|.++|+++..
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            588999999999999999999876543  11  22334422    345555443322111 2346679999999999999


Q ss_pred             HHHHHHHHHhCCE-eecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          238 EVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +++    ++.|++ +..++...++ +.+.++++||+|+.|||+|
T Consensus        74 ~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999    999999 5666655544 4588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.52  E-value=2.2e-13  Score=98.74  Aligned_cols=95  Identities=25%  Similarity=0.314  Sum_probs=75.8

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc--ccCCCCceEEEEEECC
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIATED  102 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~g~~~i~~~v~d  102 (291)
                      +||+|.|+|++++++||+++||++.......+....+..++..++..  ..+++.++.....  ...+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999987766666666777777765422  6788877655432  2377799999999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q 022840          103 VYKMVENIRAKGGNVTREP  121 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~  121 (291)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999976543

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=2.8e-13  Score=100.07  Aligned_cols=114  Identities=20%  Similarity=0.221  Sum_probs=77.8

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce------eeccCcceeEEE
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT------EYTKGNAYAQVA  227 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~g~~hi~  227 (291)
                      +.+|.|.|.|++++.+||+++|||++..+.   ++.+  .++..++.   ..+.+.......      +.....+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            468999999999999999999999987641   1212  33443332   233333221110      111234778999


Q ss_pred             EEec--chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          228 ISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      |.++  |++++++++    .++|+++...+. . ..+++.+|++||+|+.|||++.
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~-~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-W-PRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-C-CCCeeEEEEECCCCCEEEEecC
Confidence            9984  677777777    999999876554 2 2346889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.51  E-value=1.3e-12  Score=94.91  Aligned_cols=120  Identities=23%  Similarity=0.262  Sum_probs=87.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCC-CCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP-EQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ++...+.|..|.++|++++++||.++|||+.......  +...++.+..+. ..... +.-     .....++.+...+.
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~--~~~~y~~f~~~~~~~gG~-l~~-----~~~~~p~~~~~~iy   76 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDM--GEMRYAVFPADGAGAGGG-LMA-----RPGSPPGGGGWVIY   76 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccC--CCceEEEEECCCccccce-ecc-----CCcCCCCCCCEEEE
Confidence            4567789999999999999999999999998655333  223344443322 11121 110     11111223556788


Q ss_pred             EEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      |.|+|+++..+|.+++|.+++.++.+.+++.+ ++.+.||+||.|.|++.
T Consensus        77 ~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~-~a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          77 FAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEGNRFGLWSP  125 (127)
T ss_pred             EecCChHHHHHHHHhcCCeEEecccccCCceE-EEEEECCCCCEEEEeec
Confidence            99999999999999999999999999996555 47899999999999864

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.51  E-value=6.4e-14  Score=102.94  Aligned_cols=74  Identities=23%  Similarity=0.415  Sum_probs=56.6

Q ss_pred             eeEEEEeeecCcee-----ecc----CcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCC
Q 022840          203 TTVLELAYSYGVTE-----YTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG  273 (291)
Q Consensus       203 ~~~l~l~~~~~~~~-----~~~----~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G  273 (291)
                      ...++|+++++...     +..    +.|.+||||.|+|++++++++    ++.|+++...|.+  +.-...+|+.||||
T Consensus        87 ~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~l----kekGV~f~Kk~~d--Gk~K~iaF~~dpDg  160 (170)
T KOG2944|consen   87 NAKLELTHNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERL----KEKGVRFKKKLKD--GKMKPIAFLHDPDG  160 (170)
T ss_pred             cCceeeecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHH----HHhCceeeecCCC--ccccceeEEECCCC
Confidence            45678887776532     222    238999999999999999999    9999997776644  11125799999999


Q ss_pred             ceEEEecch
Q 022840          274 WKTVLVDNE  282 (291)
Q Consensus       274 ~~iel~~~~  282 (291)
                      ++||+..++
T Consensus       161 ywiei~~~s  169 (170)
T KOG2944|consen  161 YWIEIELES  169 (170)
T ss_pred             CeEEEeecC
Confidence            999998754

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.51  E-value=3.5e-13  Score=99.87  Aligned_cols=117  Identities=22%  Similarity=0.243  Sum_probs=75.5

Q ss_pred             ceEEEeeeCCccccHHHHHHh---cCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          154 LCQVMLRVGDLGRSIKFYEKA---LGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      +.|+.|.|+|++++.+||+++   ||+++..+.  .+.  .+ .+...+  ....+.+....+..+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~~--~~-~~~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GPG--AV-GYGKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CCc--ee-EeccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   689876442  111  12 223221  2344444433221111 123457999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCC--CCceEEEEECCCCceEEEe
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DP~G~~iel~  279 (291)
                      +|. +.++++.+++.++|+.+...|...+.  .+.+.+||+||+|+.|||+
T Consensus        73 ~~~-~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSR-EAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCH-HHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            873 22233334449999998887765543  2345789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.50  E-value=3.3e-13  Score=99.79  Aligned_cols=108  Identities=30%  Similarity=0.345  Sum_probs=75.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe--
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v--  230 (291)
                      ++.|+.+.|+|++++.+||+++|||++....+.      ..++..+    ...+.+......   ...++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~----~~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWDK------GAYLEAG----DLWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecCC------ceEEecC----CEEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            378999999999999999999999997654321      1223322    223333221111   1245778999998  


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +|++++++++    .++|+++..++..    .++.+||+||+|+.|||...
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC----CccEEEEECCCCCEEEEEeC
Confidence            4667777777    9999998665432    14689999999999999874

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=6.3e-13  Score=97.04  Aligned_cols=105  Identities=20%  Similarity=0.287  Sum_probs=72.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHH
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      ...|.|+|++++++||++ |||++....    .  ...++..+  ...  +.+.......    ..+..+++|.|+|+++
T Consensus         4 ~~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~--~~~~l~~~--~~~--l~l~~~~~~~----~~~~~~~~~~v~did~   68 (113)
T cd08356           4 RPFIPAKDFAESKQFYQA-LGFELEWEN----D--NLAYFRLG--NCA--FYLQDYYVKD----WAENSMLHLEVDDLEA   68 (113)
T ss_pred             eeccccccHHHHHHHHHH-hCCeeEecC----C--CEEEEEcC--CEE--EEeecCCCcc----cccCCEEEEEECCHHH
Confidence            356889999999999988 999987542    1  14556543  222  3333211111    1234578999999999


Q ss_pred             HHHHHHHcCCeee-----cCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          106 MVENIRAKGGNVT-----REPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       106 ~~~~l~~~G~~~~-----~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      ++++|+++|+++.     .++...++|.+. ++|+|||||+|+|.+
T Consensus        69 ~~~~l~~~G~~~~~~~~~~~~~~~~~g~r~-f~~~DPdGn~~~~~~  113 (113)
T cd08356          69 YYEHIKALGLPKKFPGVKLPPITQPWWGRE-FFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHHcCCcccccceecCccccCCCcEE-EEEECCCccEEEeeC
Confidence            9999999998642     234444566554 889999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=4.7e-13  Score=97.79  Aligned_cols=108  Identities=27%  Similarity=0.264  Sum_probs=75.7

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-eccCcceeEEEEEecc---
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDD---  232 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v~d---  232 (291)
                      +.|.|+|++++.+||+++||+++.....    .+......  +   +..+.+.......+ .....+.+|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            6789999999999999999999764321    13222222  2   23455544332211 1123467899999986   


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      ++++.+++    .++|+++..+|...++  ++.++|+||+||.||+.
T Consensus        73 ~~~~~~~~----~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEW----QAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHH----HHCCCeEecCccccCC--ccEEEEECCCCCEEEee
Confidence            55556666    9999999988877655  57899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=8.2e-13  Score=97.43  Aligned_cols=111  Identities=22%  Similarity=0.231  Sum_probs=75.7

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc--
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD--  232 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d--  232 (291)
                      .|+.|.|+|++++.+||+++||++...+..   + .. .+.. .+.  ...+.+......    ..+++.|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~---~-~~-~~~~-~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD---D-YA-KFLL-EDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC---C-ee-EEEe-cCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            689999999999999999999998765431   1 11 2222 121  233333221111    11588999999988  


Q ss_pred             -hHHHHHHHHHHHHHhCCEeecCCcccC-CCCceEEEEECCCCceEEEecc
Q 022840          233 -VYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 -~~~~~~~l~~~~~~~G~~~~~~p~~~~-~~~~~~~~~~DP~G~~iel~~~  281 (291)
                       +++..+++    .++|+++...|.... ....+.+|++||+|+.|||+++
T Consensus        71 dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          71 EVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence             45555565    999999987765432 2225789999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=4.4e-13  Score=99.55  Aligned_cols=112  Identities=25%  Similarity=0.270  Sum_probs=74.2

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc-----eee--ccCcceeEE
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-----TEY--TKGNAYAQV  226 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~--~~~~g~~hi  226 (291)
                      +.++.|.|+|++++.+||++ |||++.........  . .+. .++   ...+.+......     .+.  +...+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~~--~-~~~-~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEKA--A-CMV-ISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCCe--E-EEE-ECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            36789999999999999976 99987643322221  1 111 111   234444332110     000  123345799


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 ~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      +|.|++   ++++++++    +++|+++..+|...++  ++.+||+|||||.|||+
T Consensus        73 ~f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~  122 (124)
T cd09012          73 SLSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVL  122 (124)
T ss_pred             EEeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEE
Confidence            999984   66666666    9999999888766554  57899999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.48  E-value=6.1e-13  Score=98.20  Aligned_cols=108  Identities=19%  Similarity=0.158  Sum_probs=75.5

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHH
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  235 (291)
                      ...|.|+|++++.+||++ |||++..+...     ....+..+    +..+.+.......   ......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRG----DLELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcC----CEEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            457899999999999999 99998654321     12333322    3455554432111   12234689999999999


Q ss_pred             HHHHHHHHHHHhCCEee-------cCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          236 SAEVVNLVTQELGGKIT-------RQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~-------~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .+++|    +++|+++.       ..+...++ +.+.++|+||+|+.|||.|.
T Consensus        72 ~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEF----RAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHH----HHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            99999    99999853       23333333 57889999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.48  E-value=1.6e-13  Score=107.55  Aligned_cols=127  Identities=37%  Similarity=0.639  Sum_probs=106.9

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-----------cceeeeeeccccCCceeEEEEeeecCceeecc
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      -.+.-|+++.|.|.+++.+||+++||+.+.+....+.           +++.-.+++++..+.|+.++|+.+.+...|.-
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Yel   94 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYEL   94 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceec
Confidence            3578899999999999999999999999987655443           67888899999999999999999999988999


Q ss_pred             CcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhhhhc
Q 022840          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       220 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~  290 (291)
                      |+++.|+++.++|+-+.++.+    ...|.+         ..+...+++.||||+.|++.++.+..+.+|+
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~  152 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQ  152 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCCCeEE
Confidence            999999999999888877777    555531         1224578999999999999998877777664

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.47  E-value=1.1e-12  Score=97.11  Aligned_cols=113  Identities=19%  Similarity=0.187  Sum_probs=74.0

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecC-----ceeeccCcceeEEEE
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG-----VTEYTKGNAYAQVAI  228 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~~~~~~~~g~~hi~~  228 (291)
                      +.|+++.|+|++++.+||++ |||++.......    ....+..++   +..+.+.....     ........+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~----~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE----PHVEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC----CcEEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999965 999875432211    111122111   12333321110     000012234568888


Q ss_pred             Eec---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          229 STD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      .+.   |++++++++    +++|+++..+|...++ +.+.++++||+|+.|||+
T Consensus        73 ~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAEL----VGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            765   788888888    9999999888876655 457899999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=6.8e-13  Score=98.46  Aligned_cols=113  Identities=17%  Similarity=0.189  Sum_probs=72.4

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc----eee-ccCcceeEEE--E
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV----TEY-TKGNAYAQVA--I  228 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~----~~~-~~~~g~~hi~--~  228 (291)
                      |+.|.|+|++++.+||+++|||++.....      ....+...+  ....+.+......    ... ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999754321      111122111  1222222211100    000 0112445665  4


Q ss_pred             EecchHHHHHHHHHHHHHhCCEeecCCcccC---CCCceEEEEECCCCceEEEec
Q 022840          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIP---GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~---~~~~~~~~~~DP~G~~iel~~  280 (291)
                      .++|+++++++|    +++|+++..+|....   ..+.+.+|++||||+.|||..
T Consensus        74 ~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            667888888888    999999988775421   123588999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.46  E-value=1.4e-12  Score=95.09  Aligned_cols=105  Identities=23%  Similarity=0.256  Sum_probs=72.1

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeE--EEEEe
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ--VAIST  230 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h--i~~~v  230 (291)
                      +|.|+.|.|+|++++.+||. .|||++..+..      ...+...+  ..+..+.+...       ...++.|  +.+.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAG--NDHRWARLLEG-------ARKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecC--CCceEEEeecC-------CCCceeeEEEEeEh
Confidence            58999999999999999997 69999865421      12222211  12344444321       1223444  45556


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +|++++++++    +++|+++...+..  . +.+.+||+||+||.|||..
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~~--~-~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPPG--A-DPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCCc--C-CCCEEEEECCCCCEEEEec
Confidence            8899998888    9999998776522  2 2467999999999999985

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.45  E-value=9.8e-13  Score=94.79  Aligned_cols=112  Identities=29%  Similarity=0.384  Sum_probs=82.2

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHH
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  235 (291)
                      |+.+.|+|++++.+||.++||+++........  ....++..+    ...+.+....+......+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            78899999999999999999999876653211  233444432    456666554332111234678999999999988


Q ss_pred             HHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEE
Q 022840          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel  278 (291)
                      ..+++    .++|+++..++.. ...+.+.+++.||+|+.|||
T Consensus        75 ~~~~l----~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            88888    9999998877652 23347899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.45  E-value=5.1e-13  Score=96.85  Aligned_cols=95  Identities=18%  Similarity=0.221  Sum_probs=75.8

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee--eccCcceeEEEEEecc
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~v~d  232 (291)
                      +||++.|+|++++++||.++||+.+..........++..++..++.  ...++|+++.+...  ...+.|++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            5999999999999999999999987766655555566666665432  27899988665532  2367899999999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCC
Q 022840          233 VYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ++++.++|    +++|+++...+
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECE
T ss_pred             HHHHHHHH----HHCCCEEcccC
Confidence            99999999    99999988765

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=3.7e-12  Score=93.85  Aligned_cols=110  Identities=23%  Similarity=0.306  Sum_probs=75.0

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC------CCcccCCCCceEEEEEE
Q 022840           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG------VTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        27 v~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~------~~~~~~~~g~~~i~~~v  100 (291)
                      |.|.|+|++++.+||+++|||++..+   ...  ...++..+    ...+.+.....      ......+.+..+++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~---~~~--~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD---SND--GVAFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc---CCC--ceEEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            78999999999999999999998654   111  23445432    23344433211      01111222334566655


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          101 ---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                         +|++++++++.+.|+++..++...++|... ++++||+||+||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWGGYS-GYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCCceE-EEEECCCCCEEEEee
Confidence               689999999999999988777766665443 789999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=2.3e-12  Score=94.04  Aligned_cols=104  Identities=21%  Similarity=0.204  Sum_probs=72.1

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHH
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~  236 (291)
                      ..|.|+|++++.+||++ |||++....+      ...++..+    +..+.+.......    ..+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~----~~~l~l~~~~~~~----~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLG----NCAFYLQDYYVKD----WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcC----CEEEEeecCCCcc----cccCCEEEEEECCHHHH
Confidence            46889999999999987 9999876532      12334432    2334343211111    12335789999999999


Q ss_pred             HHHHHHHHHHhCCEeec-----CCcccCCCCceEEEEECCCCceEEEec
Q 022840          237 AEVVNLVTQELGGKITR-----QPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~-----~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +++|    +++|+++..     ++...++ +.+.++|+|||||.|+|.+
T Consensus        70 ~~~l----~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHI----KALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHH----HHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            9999    999987542     3333333 5789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.42  E-value=1.3e-12  Score=96.13  Aligned_cols=124  Identities=33%  Similarity=0.513  Sum_probs=81.2

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCC--------C-------CcceEEEEeecCCCC
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP--------E-------QSYFVVELTYNYGVT   85 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--------~-------~~~~~l~~~~~~~~~   85 (291)
                      -..+.|..+.++|+.++..||++++|+.+.......+..+...+++...        .       .....+++.++-+..
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            3566888899999999999999998888775543332222222222100        0       011235555543322


Q ss_pred             c-----cc----CCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCce-EEEEEECCCCcEEEEEEc
Q 022840           86 S-----YD----IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT-HFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ~-----~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~~DP~G~~iel~~~  147 (291)
                      .     +.    .+.|.+||||.|+|++++.++|+++|+++...+.   .|.. ..+|+.||||+.|||...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~---dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLK---DGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCC---CccccceeEEECCCCCeEEEeec
Confidence            1     21    2248999999999999999999999999654443   2222 358999999999998753

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.35  E-value=7.6e-12  Score=92.18  Aligned_cols=110  Identities=25%  Similarity=0.248  Sum_probs=74.1

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc------eeeccCcceeEEEEEe
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV------TEYTKGNAYAQVAIST  230 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~~~~~g~~hi~~~v  230 (291)
                      |.|.|.|++++.+||+++|||++..+.   ..  ...++..+    +..+.+......      .....+.+-.|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            679999999999999999999986551   11  12334432    344555432110      0111122334566655


Q ss_pred             ---cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          231 ---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                         +|+++.++++    ++.|+++..+|...++ +++.++++||+|++|||..
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence               5777777777    9999999887766554 4788999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.30  E-value=2.9e-11  Score=96.41  Aligned_cols=100  Identities=24%  Similarity=0.384  Sum_probs=73.6

Q ss_pred             ceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeecCC--CCeeEEEeccCCCCcceEEEEeecCCC--Cc-------c
Q 022840           21 KRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGV--TS-------Y   87 (291)
Q Consensus        21 ~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~-------~   87 (291)
                      +.+++||++.|+  |++++.+||+++|||+.......++  .+.....+...  ...+.+++..+...  ..       .
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~~~~fl~~   78 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQIQEFLEY   78 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccHHHHHHHH
Confidence            368999999999  9999999999999999877654333  23444455532  23455666653321  11       1


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCc
Q 022840           88 DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|.|+.||||.|+|+++++++|+++|+++...|.
T Consensus        79 ~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          79 YGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             hCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            24779999999999999999999999999876654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.23  E-value=1.4e-10  Score=80.51  Aligned_cols=118  Identities=24%  Similarity=0.276  Sum_probs=75.7

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc--ccCCCC--ceE--
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTG--FGH--   95 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~g--~~~--   95 (291)
                      +-+-|++|.|+|++++++||.++||++.-..    ..    .|+.+.--...+++.+........  ...+.+  ..|  
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRs----td----~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfG   74 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRS----TD----TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFG   74 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccc----cc----eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccce
Confidence            4568999999999999999999999986322    11    122111112233343332221111  112222  344  


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeecCCccCC---CCceEEEEEECCCCcEEEEEEc
Q 022840           96 LAIATEDVYKMVENIRAKGGNVTREPGPLK---GMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +.+.++|.-++.+||+++|+....+|.-.-   .|.....|+.||.||.+|+-.-
T Consensus        75 vVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          75 VVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            567789999999999999999877775542   1223347899999999998643

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.20  E-value=3.1e-10  Score=91.76  Aligned_cols=122  Identities=21%  Similarity=0.226  Sum_probs=86.3

Q ss_pred             CCCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce-eeccCcceeEEE
Q 022840          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-EYTKGNAYAQVA  227 (291)
Q Consensus       149 ~~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~g~~hi~  227 (291)
                      ..+..+..+.|+|+|++++..||++++|+++..+...      ...+..++   ...+.|.+..+.. +.+...|+.|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCC---EEEEEEEeCCCCCCCCccccceeeee
Confidence            3466788999999999999999999999999876432      22333332   3455655533332 223557999999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |-+++-.++.+.| .++.+.|..+. ++.++.-  .-.+||.||+||-||++...+
T Consensus        77 fLlP~r~~L~~~l-~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          77 FLLPTREDLARVL-NHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             eecCCHHHHHHHH-HHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEecCC
Confidence            9999844444444 66699998875 4455433  356999999999999998643

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.18  E-value=1.3e-10  Score=92.62  Aligned_cols=99  Identities=20%  Similarity=0.328  Sum_probs=74.1

Q ss_pred             CCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCcc--cceeeeeeccccCCceeEEEEeeecCc--e-------eec
Q 022840          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV--T-------EYT  218 (291)
Q Consensus       152 ~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-------~~~  218 (291)
                      .+++|+++.|+  |++++.+||+++|||++..+....+  .......+..  +.....++|..+...  .       ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~--~~g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLAS--PDGKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEEC--CCCcEEEEEecCCCCCCccHHHHHHHHh
Confidence            35899999999  9999999999999999877654332  2233344442  224667777664431  1       122


Q ss_pred             cCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCc
Q 022840          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       219 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      .++|++||||.|+|++++++++    +++|+++...|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            4689999999999999999999    999999998873

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.15  E-value=3.2e-10  Score=99.29  Aligned_cols=104  Identities=21%  Similarity=0.352  Sum_probs=74.5

Q ss_pred             CCCCceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeecCCC--CeeEEEeccCCCCcceEEEEeecCC---CC----
Q 022840           17 PKKDKRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYG---VT----   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~---~~----   85 (291)
                      +.+.+.+++||++.|+  |++++..||+++|||++.........  ......+...  ...+.+++..+..   ..    
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~--~g~~~i~L~ep~~~~~~s~i~~  229 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP--DGKVKIPLNEPASGKDKSQIEE  229 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC--CCcEEEEEeccCCCCCCCHHHH
Confidence            4467899999999999  99999999999999998765543221  2222233321  2245566665321   11    


Q ss_pred             --cccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCc
Q 022840           86 --SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 --~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                        ....|.|+.||||.|+|+++++++|+++|+++...|.
T Consensus       230 fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       230 FLEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             HHHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence              1124789999999999999999999999999876553

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=99.14  E-value=2.9e-09  Score=75.08  Aligned_cols=113  Identities=24%  Similarity=0.396  Sum_probs=69.0

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHH
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~  104 (291)
                      .+.+|.|+|.+.+..||++.|||+++.+...      .++++.......++|+..+............+++|.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEna------~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEENA------LAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEETT------EEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeecccc------EEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            5678999999999999999999999876543      7777765556667777776665556566668999999999977


Q ss_pred             HHHHHHHHcCCeeecCCccCCCCceEEEE-EECCCCcEEEEEEcC
Q 022840          105 KMVENIRAKGGNVTREPGPLKGMTTHFAF-VKDPDGYIFELIQRG  148 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~-~~DP~G~~iel~~~~  148 (291)
                      + .+.|.++|..+..   ...+..+ |+| ..+|+|+++.|....
T Consensus        76 E-Ie~LLar~~~~~~---l~kg~~g-yAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   76 E-IEALLARGAQYDR---LYKGKNG-YAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             H-HHHHHHC-S--SE---EEE-SSS-EEEEEE-TT--EEEEE--S
T ss_pred             H-HHHHHhcccccce---eEEcCCc-eEEEEECCCCCEEEEEEcC
Confidence            7 4556666665321   2222222 455 689999999987653

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.09  E-value=8.3e-09  Score=76.93  Aligned_cols=111  Identities=16%  Similarity=0.182  Sum_probs=73.9

Q ss_pred             EEEEe-CCHHHHHHHHHHhcCCEEeeEeec----------CCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceE
Q 022840           27 AVYRV-GDLDRTIKYYTECFGMELLRKRDV----------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        27 v~l~v-~D~~~~~~FY~~~lG~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      .-|.+ .|.+++++||+++||+++......          .++......+.+++  .  .+.+......... .+....+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~--~l~~~d~~~~~~~-~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG--Q--RLMASDGGPGFPF-TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC--E--EEEEEcCCCCCCC-CCCCCEE
Confidence            34666 899999999999999998875432          12333455555442  1  2323322111111 1223457


Q ss_pred             EEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEE
Q 022840           96 LAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel  144 (291)
                      +++.|+|   +++++++|.+.| ++..++...++|.+. ..++||+|+.|+|
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i  127 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLF-GWVTDRFGVSWQI  127 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCccccc-EEEECCCCCEEEe
Confidence            8898886   778889987655 888888888888764 7899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.03  E-value=3.5e-08  Score=73.04  Aligned_cols=117  Identities=21%  Similarity=0.212  Sum_probs=85.3

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEeeEeecCC----------CCeeEEEeccCCCCcceEEEEeecCCCCcccCCC-Cce
Q 022840           27 AVYRVG-DLDRTIKYYTECFGMELLRKRDVPE----------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT-GFG   94 (291)
Q Consensus        27 v~l~v~-D~~~~~~FY~~~lG~~~~~~~~~~~----------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~-g~~   94 (291)
                      .-|..+ |.++|++||+++||.++.......+          +...+.-+.++.    ..|.+....+......+. ...
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g----~~im~sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGG----STIMLSDAFPDMGATEGGGTSL   79 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECC----EEEEEecCCCccCcccCCCeeE
Confidence            346777 9999999999999999988776666          455566666542    123233222111112222 234


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           95 HLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|.+.++|++++++++.+.|+++..++....||.+ +..++||.|+.|-|....
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r-~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDR-YGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCcccc-eEEEECCCCCEEEEecCc
Confidence            57788889999999999999999999999999877 477999999999987654

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.01  E-value=1.7e-09  Score=80.32  Aligned_cols=122  Identities=22%  Similarity=0.351  Sum_probs=73.0

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCe---eEEEeccCCCCcceEEEE--------eecCCCC-cccC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY---SNAFLGFGPEQSYFVVEL--------TYNYGVT-SYDI   89 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~l~~--------~~~~~~~-~~~~   89 (291)
                      ++++||++.|+|++++++||+++||++............   ...+..............        ....... ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            578999999999999999999999999987654332211   111111110000000000        0000000 0011


Q ss_pred             C-CCceEEEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           90 G-TGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 ~-~g~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      + .+..|+++.+.+   ...........|..+..... ..++.  .+||+||||+.+|+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~--~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGV--HVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcce--EEEEECCCCcEEEeeC
Confidence            1 247799999988   56666677777887654433 33332  5899999999999874

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.01  E-value=5e-09  Score=74.26  Aligned_cols=117  Identities=17%  Similarity=0.270  Sum_probs=73.4

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcc-------cCCCCce
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-------DIGTGFG   94 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-------~~~~g~~   94 (291)
                      ++...|.|.|+|++++++||+. |||+.-.......   ....+.. +   .+.+.|.....-..+       .....-.
T Consensus         2 ~~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~-~---ni~vMLL~~~~fq~F~~~~i~dt~~s~ev   73 (133)
T COG3607           2 TQMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIIS-D---NIFVMLLEEARFQTFTKRQIADTTKSREV   73 (133)
T ss_pred             ceEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEe-c---cEEEEEeccHHhhhhcccccccccCCceE
Confidence            4567899999999999999998 9998765433221   1222221 1   122222221111111       1112234


Q ss_pred             EEEEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           95 HLAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        95 ~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      -||+.+.   +++++.++..++|.+...++.....-.+  ..|.|||||.||++.-.
T Consensus        74 li~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg--~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          74 LISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYG--RSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             EEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccc--eeeeCCCCCeEEEEEeC
Confidence            5788885   4889999999999998666655443222  35999999999998643

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.99  E-value=7.1e-09  Score=81.68  Aligned_cols=147  Identities=23%  Similarity=0.294  Sum_probs=83.2

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-------c-----cCCC
Q 022840           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-------Y-----DIGT   91 (291)
Q Consensus        24 i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-------~-----~~~~   91 (291)
                      |+|+++.|+|++++.++|++.|||++.....-+..+.....+.+++   . .||+....+...       .     ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            7999999999999999998889999988776666566666666653   2 566665322111       0     1467


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceE--EEEEECC----CCcEEEEEEcCC-C---------CCCce
Q 022840           92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH--FAFVKDP----DGYIFELIQRGP-T---------PEPLC  155 (291)
Q Consensus        92 g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~--~~~~~DP----~G~~iel~~~~~-~---------~~~~~  155 (291)
                      |+..+|+.++|+++..++|+++|+... .+....++...  .+++.++    .+..-.+++... .         ...|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~-~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAG-SRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEE-EEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCC-CcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            888999999999999999999997621 11111122211  2344553    244555554332 1         13489


Q ss_pred             EEEeeeCCccccHHHHHHhc
Q 022840          156 QVMLRVGDLGRSIKFYEKAL  175 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~l  175 (291)
                      .+.+.++|++++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999998865

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.97  E-value=8e-09  Score=73.25  Aligned_cols=118  Identities=23%  Similarity=0.219  Sum_probs=71.9

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeec------CceeeccCcceeEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY------GVTEYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~g~~hi  226 (291)
                      +...|.|.|.|++++.+||+. |||.......+...   ..++-  ++. -+.+-|.+.+      .....+..+.-..+
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~a---~~mi~--~~n-i~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDEDA---ACMII--SDN-IFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcccccc---eeEEE--ecc-EEEEEeccHHhhhhcccccccccCCceEEE
Confidence            456889999999999999976 99987665443321   11111  111 1222221111      01111223344678


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++.+.+ ...++.+-++..+.|+....+|.....  .+..-|.|||||.||++=
T Consensus        76 ~ls~~s-~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          76 SLSAGS-REEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EeccCc-HHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEE
Confidence            998876 333333334449999999777765433  566779999999999974

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.97  E-value=1.7e-08  Score=74.74  Aligned_cols=116  Identities=16%  Similarity=0.161  Sum_probs=80.7

Q ss_pred             EeeeC-CccccHHHHHHhcCCeeeeeccCcc----------cceeeeeeccccCCceeEEEEeeecCceeeccCcce-eE
Q 022840          158 MLRVG-DLGRSIKFYEKALGMKLLRTIDSPE----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAY-AQ  225 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~-~h  225 (291)
                      -|.+. |.+++++||.++||.++..+....+          +++.-..+..+    +..|-+....+......+++. ..
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEE
Confidence            46667 9999999999999999888775544          22222222222    333333332222221222333 45


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 i~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      |.+.++|+++.++++    .+.|.++..++....+ +.++..++||.|+.|.|....
T Consensus        81 l~~~~~d~da~f~~a----~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          81 LDLYVEDVDAVFERA----AAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEEehHHHHHHHHH----HhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCc
Confidence            777888888888888    9999999999988777 578999999999999998754

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.95  E-value=1.7e-08  Score=75.29  Aligned_cols=114  Identities=15%  Similarity=0.059  Sum_probs=69.8

Q ss_pred             Eeee-CCccccHHHHHHhcCCeeeeeccC----------cccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEE
Q 022840          158 MLRV-GDLGRSIKFYEKALGMKLLRTIDS----------PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       158 ~l~v-~D~~~~~~Fy~~~lG~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      .|.+ .|.+++++||.++||+++......          ..+.+.-..+..+    +..+-+......... ...+-.++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEE
Confidence            4566 899999999999999998765531          1122222222222    233433332221111 12234578


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      ++.|+|.++ ++++++++.+.| ++..+|...++ +.+..+++||+|+.|+|.
T Consensus        79 ~i~~~~~e~-v~~~~~~l~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEE-ADRLFEALSEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHH-HHHHHHHHhcCC-eEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            999987333 333334436655 88888877765 578999999999999974

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.89  E-value=1.8e-08  Score=70.21  Aligned_cols=117  Identities=20%  Similarity=0.242  Sum_probs=74.0

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee--eccCcce--eE--E
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAY--AQ--V  226 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~--~h--i  226 (291)
                      .+.|..+.|.|++++.+||-++||....++.+   .-+..-+++     +..++.+........  ...+.++  -|  +
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd---~wvdfDfyG-----HQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD---TWVDFDFYG-----HQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc---eEEEeeecc-----cEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            35789999999999999999999998654322   112222333     122222222111110  0012222  23  5


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCEeecCCccc---CCCCceEEEEECCCCceEEEecc
Q 022840          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~---~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .+.++|..++.++|    +++|+.+.-+|.-+   ..+..+.+++.||+||.+|+-..
T Consensus        76 Vl~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          76 VLPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEHHHHHHHHHHH----HHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            56677888888888    99999988888532   12236789999999999998653

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.87  E-value=1.8e-08  Score=88.02  Aligned_cols=100  Identities=21%  Similarity=0.325  Sum_probs=72.9

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-----CCeeEEEeccCCCCcceEEEEeecCC---C-C---c-
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----EKYSNAFLGFGPEQSYFVVELTYNYG---V-T---S-   86 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~~---~-~---~-   86 (291)
                      .+.+|+||++.|.+++.+..||+++|||+........+     .+.+...+..+.  ..+.+++..+..   . .   . 
T Consensus       177 gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~ipLnEP~~~~~~~SqI~eF  254 (398)
T PLN02875        177 GLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLLPLNEPTFGTKRKSQIQTY  254 (398)
T ss_pred             CcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEEEeccCCCCCCCcChHHHH
Confidence            47899999999999999999999999998875433322     123455555432  235566665432   1 1   1 


Q ss_pred             --ccCCCCceEEEEEECCHHHHHHHHHHc----CCeeecCC
Q 022840           87 --YDIGTGFGHLAIATEDVYKMVENIRAK----GGNVTREP  121 (291)
Q Consensus        87 --~~~~~g~~~i~~~v~d~~~~~~~l~~~----G~~~~~~~  121 (291)
                        ...|.|++||||.|+||.+++++|+++    |+++...|
T Consensus       255 L~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        255 LEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence              235789999999999999999999999    99876543

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.85  E-value=1.5e-08  Score=75.24  Aligned_cols=121  Identities=23%  Similarity=0.270  Sum_probs=72.7

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccc---eeeeeeccccC--CceeEE------EEeeecCce-eeccC
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK---CALAMLGYAEE--DQTTVL------ELAYSYGVT-EYTKG  220 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~l------~l~~~~~~~-~~~~~  220 (291)
                      .+.|+.+.|+|++++.+||+++||+++..+.......   ....+......  ......      ......... .....
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            5789999999999999999999999988765432211   11111111000  000000      000000000 01111


Q ss_pred             -cceeEEEEEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          221 -NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 -~g~~hi~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                       .+..|+++.+++   ........    ...|..+...+. ...  +..+|++||||+.||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             247899999998   55555555    778888766544 222  338999999999999974

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.74  E-value=8.5e-08  Score=71.37  Aligned_cols=123  Identities=15%  Similarity=0.176  Sum_probs=79.8

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc--ccCCCCceEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHL   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~g~~~i   96 (291)
                      +.+.++++|.+.++|.++...+++ .|||+.+.+....    ....++.|  ...++|...+......  ..+|++++-|
T Consensus         5 ~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQG--~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    5 LGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQG--DINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             T-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEET--TEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEeC--CEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            678999999999999888888886 5999998764322    24444533  4555553322111111  2378999999


Q ss_pred             EEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           97 AIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      +|+|+|.++++++..+.|++...++...  +...+.-++.++|.++.|++....
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCC
Confidence            9999999999999999999866554322  223345689999999999987643

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.70  E-value=1.7e-07  Score=79.34  Aligned_cols=107  Identities=22%  Similarity=0.310  Sum_probs=70.3

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      ..+..||+|.|+|++++++||+++|++.. .    .++.  ...+  +  ..-+.+-+.+. ..    ....-.-+|+.+
T Consensus       245 ~~~~IfVNLpV~DL~rS~~FYt~LF~~n~-F----sde~--a~cm--~--dtI~vMllt~~-D~----~~~~evLl~Ls~  308 (357)
T PRK01037        245 SPKTFSVVLEVQDLRRAKKFYSKMFGLEC-W----DGDK--LFLL--G--KTSLYLQQTKA-EK----KNRGTTTLSLEL  308 (357)
T ss_pred             CCceEEEEeeeCCHHHHHHHHHHHhCCCC-C----CCCc--cccc--c--CcEEEEEecCC-CC----CCcceEEEEecc
Confidence            35678999999999999999999988864 2    2221  1122  2  22222222222 11    122334578888


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          101 ED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      ++   +|+++++..++|.....++..... .   --|.|||||.||++..
T Consensus       309 ~Sre~VD~lv~~A~aaGG~~~~~~~D~Gf-~---rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        309 ECEHDFVRFLRRWEMLGGELGEQADGHFP-L---RLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CCHHHHHHHHHHHHHcCCCCCCCcccccC-c---ceeECCCCCEEEEEEE
Confidence            65   889999999999976555554443 2   2499999999999854

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.50  E-value=1.2e-06  Score=74.19  Aligned_cols=107  Identities=21%  Similarity=0.245  Sum_probs=68.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .+..||+|.|.|++++.+||+++|++.. ..  ...   .... +    +.-..+-+.+. +    +....-.-+++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs--de~---a~cm-~----dtI~vMllt~~-D----~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD--GDK---LFLL-G----KTSLYLQQTKA-E----KKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CC--CCc---cccc-c----CcEEEEEecCC-C----CCCcceEEEEeccC
Confidence            5678999999999999999999988885 21  111   1111 1    11222222222 1    12234467889888


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      + .+.++.+-++..++|++...+|.++..    .--|.|||||.||++
T Consensus       310 S-re~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~  352 (357)
T PRK01037        310 C-EHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVS  352 (357)
T ss_pred             C-HHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEE
Confidence            7 444444445559999977665554322    566999999999997

>PRK10148 hypothetical protein; Provisional

Probab=98.37  E-value=6.4e-05  Score=57.19  Aligned_cols=117  Identities=20%  Similarity=0.194  Sum_probs=76.4

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEeeEeec--------------------CCCCeeEEEeccCCCCcceEEEEeecCCCC
Q 022840           27 AVYRVG-DLDRTIKYYTECFGMELLRKRDV--------------------PEEKYSNAFLGFGPEQSYFVVELTYNYGVT   85 (291)
Q Consensus        27 v~l~v~-D~~~~~~FY~~~lG~~~~~~~~~--------------------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~   85 (291)
                      .-|..+ |.++|.+||+++||.++......                    .++......|.+++  .  .+.+.... ..
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g--~--~lm~sD~~-~~   79 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAG--S--DIMMSDAI-PS   79 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECC--E--EEEEECCC-CC
Confidence            345554 89999999999999987654211                    12344455565542  1  22222211 11


Q ss_pred             cccCCCCceEEEEEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCC
Q 022840           86 SYDIGTGFGHLAIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        86 ~~~~~~g~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~  151 (291)
                      ....+ ...++++.++|.++   ++++| +.|.++..++....||.+ +..++||.|+.|.|......|
T Consensus        80 ~~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~-~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         80 GKAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHG-FGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             cCCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhc-cEEEECCCCCEEEEEecCCCC
Confidence            11111 24567888888776   55666 588999999999899876 488999999999998766554

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.33  E-value=1.5e-06  Score=73.01  Aligned_cols=101  Identities=21%  Similarity=0.281  Sum_probs=72.4

Q ss_pred             CceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeecCCC--CeeEEEeccCCCCcceEEEEeecCCCCc-------cc
Q 022840           20 DKRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS-------YD   88 (291)
Q Consensus        20 ~~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~~~~-------~~   88 (291)
                      .+..|+|++..|.  .++.+..||+++|+|+.....+.++.  +.+...+....+  .+.|.+.......+       ..
T Consensus       164 g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G--~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         164 GLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCG--KVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             CceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCC--cEEeecccCCCchhHHHHHHHHh
Confidence            4579999999886  99999999999999998876655442  333333433222  34444433322222       12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeecCCc
Q 022840           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        89 ~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      .|.|+.||+|.++||-++.++|+++|++....|.
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            6889999999999999999999999999776554

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.20  E-value=2.9e-06  Score=70.02  Aligned_cols=129  Identities=15%  Similarity=0.178  Sum_probs=86.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--e-----eccCccee
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--E-----YTKGNAYA  224 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~g~~  224 (291)
                      .+++|+.+.|.+...+..||...|||++....+...+........  ...+...+-+....++.  .     ...+.|+-
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~a--lr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHA--LRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHH--hhcCCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            458999999999999999999999999887654433211111111  11112222222211111  1     22456788


Q ss_pred             EEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCC--ceEEEEECCCCceEEEecchhhhh
Q 022840          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       225 hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                      -+||.|+|++++.+.+    .++|+.+..+|-......  .+++.+..+.-....++++..++.
T Consensus        94 dvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g  153 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKG  153 (381)
T ss_pred             ceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccc
Confidence            9999999999999999    999999999986543322  366778888777777777765543

>PRK10148 hypothetical protein; Provisional

Probab=98.20  E-value=5.9e-05  Score=57.41  Aligned_cols=116  Identities=17%  Similarity=0.101  Sum_probs=70.1

Q ss_pred             EEeeeC-CccccHHHHHHhcCCeeeeecc---C-----------------cccceeeeeeccccCCceeEEEEeeecCce
Q 022840          157 VMLRVG-DLGRSIKFYEKALGMKLLRTID---S-----------------PELKCALAMLGYAEEDQTTVLELAYSYGVT  215 (291)
Q Consensus       157 v~l~v~-D~~~~~~Fy~~~lG~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  215 (291)
                      ..|... +.+++.+||+++||.++.....   .                 ..+.+.-..+..+    +..|-+.......
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~~~   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIPSG   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCCCc
Confidence            345564 8999999999999988764431   0                 0122222222222    2222222211111


Q ss_pred             eeccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       216 ~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                       .... .-.++.+.++|.+++ +++.+. .+.|+++..++...++ +.++..++||.|+.|.|...
T Consensus        81 -~~~~-~~~~l~l~~~d~ee~-~~~~~a-La~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 -KAHY-SGFTLVLDTQDVEEG-KRWFDN-LAANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             -CCCC-CeEEEEEECCCHHHH-HHHHHH-hhCCCEEEecchhcch-hhccEEEECCCCCEEEEEec
Confidence             0111 235677788885553 444444 3689999999988777 56889999999999999764

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.19  E-value=5.4e-05  Score=53.78  Aligned_cols=114  Identities=28%  Similarity=0.389  Sum_probs=65.7

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--eeccCcceeEEEEEecc
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hi~~~v~d  232 (291)
                      .+-+++|.|-+...+||.++|||++.....      .+.+++  +......+.|-++++..  ...+..-+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg--~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILG--DQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE---TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEec--CCCCceEEEEecCCccccccccCcceeeEEEEEcCC
Confidence            456799999999999999999999876532      345555  33334444444544332  12233467899999998


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                       ...++.|    .++|.+....   .-+.+++.+-..+|.|..|.+....+.
T Consensus        74 -~~EIe~L----Lar~~~~~~l---~kg~~gyAfe~vSPEgd~~llhaEdd~  117 (125)
T PF14506_consen   74 -PKEIEAL----LARGAQYDRL---YKGKNGYAFEAVSPEGDRFLLHAEDDI  117 (125)
T ss_dssp             -HHHHHHH----HHC-S--SEE---EE-SSSEEEEEE-TT--EEEEE--S-G
T ss_pred             -HHHHHHH----Hhccccccee---EEcCCceEEEEECCCCCEEEEEEcCCH
Confidence             7777788    7777664332   223346777789999999999876544

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.05  E-value=9.9e-05  Score=55.09  Aligned_cols=117  Identities=18%  Similarity=0.151  Sum_probs=76.1

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee----eccCcceeEEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hi~~  228 (291)
                      .+.+|.+.+++..+...++ +.|||+..-+.....  ..+ +-+     +...+-+...+....    ...|+++--++|
T Consensus         9 G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hrsk~--v~l-~rQ-----G~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLF-TALGFQPVARHRSKD--VTL-YRQ-----GDINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHH-CCCCEEEECCECCCS--EEE-EEE-----TTEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHH-HHhCcceEEecCCcc--eEE-EEe-----CCEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            4788999999987788877 569999887654433  223 233     134444444322211    225789999999


Q ss_pred             EecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      .|+|..+++++.    .++|.+....|....  .-...-++-++|..+-|+++...
T Consensus        80 rV~Da~~A~~rA----~~~GA~~~~~~~~~~--e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   80 RVDDAAAAYERA----VALGAEPVQEPTGPG--ELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EES-HHHHHHHH----HHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EeCCHHHHHHHH----HHcCCcCcccCCCCC--cEeeeeEEccCCCEEEEEecCCC
Confidence            999999999999    999999888764322  24667899999999999997544

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.67  E-value=0.00016  Score=56.87  Aligned_cols=87  Identities=24%  Similarity=0.296  Sum_probs=49.9

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccce--eeeeeccccCCceeEEEEeeecCceee------------cc
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC--ALAMLGYAEEDQTTVLELAYSYGVTEY------------TK  219 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~~~~~~------------~~  219 (291)
                      |+|+.+.|+|++++.++|.+.|||.+......+..+.  .+.+++  +   . .|||....+..+.            ..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~--~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG--D---G-YLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S--S---S-EEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC--C---c-eEEEEEeCCcccccccccceechhhcC
Confidence            6899999999999999998889999887665544222  344443  2   2 6777653221111            13


Q ss_pred             CcceeEEEEEecchHHHHHHHHHHHHHhCCE
Q 022840          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGK  250 (291)
Q Consensus       220 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~  250 (291)
                      +.|+.++++.++|+++..+++    ++.|+.
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l----~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARL----RAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHH----HTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHH----HhcCCC
Confidence            568899999999999999999    999975

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.95  E-value=0.026  Score=41.00  Aligned_cols=99  Identities=21%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             CCccccHHHHHHhcCCeeeee-ccCc------ccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchH
Q 022840          162 GDLGRSIKFYEKALGMKLLRT-IDSP------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  234 (291)
                      .+.++|.+||.++||-..... ...+      .+++....+..+    +..+-.....  .....+++ ..+++.++| .
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~~~-~sl~i~~~~-~   82 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFGNN-ISLCIECDD-E   82 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS----TT-EEEEEEESS-H
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCCCc-EEEEEEcCC-H
Confidence            688999999999999432221 1111      112222222221    2223222222  12223344 568888888 6


Q ss_pred             HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      +..++++.+|.+.|-         +.  .++..++|..|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG~---------~~--~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGGQ---------WF--SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTTE---------TC--CEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCCC---------cc--ceeEEEEeCCCCEEEeC
Confidence            667777777676664         22  37899999999999986

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.86  E-value=0.0023  Score=44.55  Aligned_cols=93  Identities=18%  Similarity=0.205  Sum_probs=43.4

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec--
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--  231 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~--  231 (291)
                      +..+.++|+| +++..||.++||-..-         ..+.+....+++    +.+       +....=++..+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~G~D----L~~-------~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQGPD----LTI-------ENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE---CC----GSS--------TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeeccCCc----ccc-------CCCcEEeeEEEEEEecCc
Confidence            5678999999 8899999998873321         233444422211    110       0001127788999998  


Q ss_pred             -chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          232 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 -d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                       |+.++.+.+    ++.  .+.-++      ..+++.+.||++..|+|.
T Consensus        65 ~Dl~~L~~~l----e~~--~~fidK------k~k~l~~~Dps~IElWFe  101 (101)
T PF14507_consen   65 FDLAALKSHL----EEQ--EFFIDK------KEKFLVTSDPSQIELWFE  101 (101)
T ss_dssp             --HHHHHHHT----TTS---EE--T------T-SEEEEE-TTS-EEEEE
T ss_pred             ccHHHHHHHh----ccc--ceEecC------CceEEEEECCcceEEEeC
Confidence             455555555    663  333332      257899999999999873

>PF15067 FAM124: FAM124 family

Probab=96.65  E-value=0.021  Score=45.89  Aligned_cols=104  Identities=14%  Similarity=0.163  Sum_probs=62.3

Q ss_pred             eEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEecc-CCCCcceEEEEeec-CCCCcccCCCCceEEEE
Q 022840           23 RFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF-GPEQSYFVVELTYN-YGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        23 ~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~~~~-~~~~~~~~~~g~~~i~~   98 (291)
                      .+--++++|+  |.+.+.+||+-+|+-+.......      ..++.+ ...+..+.+.+..- .+..+  ......-+.|
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~------FC~F~lys~~~~~iQlsLK~lp~~~~p--~p~esavLqF  199 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKED------FCFFTLYSQPGLDIQLSLKQLPPGMSP--EPTESAVLQF  199 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCC------cEEEEEecCCCeEEEEEeccCCCCCCc--ccccceEEEE
Confidence            5667899999  99999999999999987654332      333332 23333444444332 11111  1123346899


Q ss_pred             EECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEE
Q 022840           99 ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel  144 (291)
                      .|.|+.+++--|-.--.++       ..++   --..|||||.|-|
T Consensus       200 ~V~~igqLvpLLPnpc~PI-------S~~r---WqT~D~DGNkILL  235 (236)
T PF15067_consen  200 RVEDIGQLVPLLPNPCSPI-------SETR---WQTEDYDGNKILL  235 (236)
T ss_pred             EecchhhhcccCCCCcccc-------cCCc---ceeeCCCCCEecc
Confidence            9999988765543222221       1111   1379999999854

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.52  E-value=0.19  Score=36.50  Aligned_cols=96  Identities=20%  Similarity=0.385  Sum_probs=52.2

Q ss_pred             CCHHHHHHHHHHhcCCEEe-eEeecCC------CCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC--
Q 022840           32 GDLDRTIKYYTECFGMELL-RKRDVPE------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED--  102 (291)
Q Consensus        32 ~D~~~~~~FY~~~lG~~~~-~~~~~~~------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d--  102 (291)
                      .|.++|.+||+++||-..+ .....++      +......+.+++    ..+......  .....+ ....+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g----~~lm~~D~~--~~~~~~-~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGG----QKLMASDGG--PDFPFG-NNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETT----EEEEEEEES--TS-----TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECC----eEEEEECCC--CCCCCC-CcEEEEEEcCCHH
Confidence            6899999999999985433 2222221      233344444431    122222221  111222 23577888887  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          103 -VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                       ++.++++|.+-|-         ++ . .+..+.|--|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~---------~~-~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ---------WF-S-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE---------TC-C-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC---------cc-c-eeEEEEeCCCCEEEeC
Confidence             5556777777764         22 3 3688999999999875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.92  E-value=0.15  Score=35.63  Aligned_cols=90  Identities=17%  Similarity=0.245  Sum_probs=39.8

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCC--c-ccCCCCceEEEE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--S-YDIGTGFGHLAI   98 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~-~~~~~g~~~i~~   98 (291)
                      ..+..+.|+|+| +++++||+++||-+.      +                 +.+.+.+..++.  . ....-++..+-|
T Consensus         4 F~~e~i~LNV~d-~~~~~fy~~~f~~~~------~-----------------~~l~f~ea~G~DL~~~~~~twDLe~Lkf   59 (101)
T PF14507_consen    4 FEFESIELNVPD-AKSQSFYQSIFGGQL------P-----------------FFLTFQEAQGPDLTIENNETWDLEMLKF   59 (101)
T ss_dssp             EEE-EEEEEE-T--T---S--H---HHH------T-----------------TTEEEEE---CCGSS-TTSBSSEEEEEE
T ss_pred             eEEEEEEEeCCC-hhHHHHHHhccccCC------C-----------------ceEEEeeccCCccccCCCcEEeeEEEEE
Confidence            357789999999 889999999886211      0                 011111111110  0 011115667889


Q ss_pred             EEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEE
Q 022840           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFE  143 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~ie  143 (291)
                      .|+   |+.++.++|.+.++-+.        ....+..+.||.+..+-
T Consensus        60 ~V~~~~Dl~~L~~~le~~~~fid--------Kk~k~l~~~Dps~IElW   99 (101)
T PF14507_consen   60 QVPKDFDLAALKSHLEEQEFFID--------KKEKFLVTSDPSQIELW   99 (101)
T ss_dssp             EES-S--HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EEE
T ss_pred             EecCcccHHHHHHHhcccceEec--------CCceEEEEECCcceEEE
Confidence            998   57788888887444321        12224668999996554

>PF15067 FAM124: FAM124 family

Probab=94.09  E-value=0.49  Score=38.24  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=60.8

Q ss_pred             CCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeee-cCceeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS-YGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~~~~~~~~g~~hi~~  228 (291)
                      ..+.-+++.|+  |.+.+.+||+-+|+-++.....+    +. +|.=+.......++.|-.. .+..+  ....-..+.|
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~----FC-~F~lys~~~~~iQlsLK~lp~~~~p--~p~esavLqF  199 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQKED----FC-FFTLYSQPGLDIQLSLKQLPPGMSP--EPTESAVLQF  199 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCC----cE-EEEEecCCCeEEEEEeccCCCCCCc--ccccceEEEE
Confidence            45777889998  99999999999999887544322    22 2222223323333333222 22211  1223367899


Q ss_pred             EecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEE
Q 022840          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTV  277 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~ie  277 (291)
                      .|.|+-.++.-|     -+..        .|- +...+-..|||||.|=
T Consensus       200 ~V~~igqLvpLL-----Pnpc--------~PI-S~~rWqT~D~DGNkIL  234 (236)
T PF15067_consen  200 RVEDIGQLVPLL-----PNPC--------SPI-SETRWQTEDYDGNKIL  234 (236)
T ss_pred             EecchhhhcccC-----CCCc--------ccc-cCCcceeeCCCCCEec
Confidence            999976665555     1111        111 2234778999999874

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.12  E-value=9.2  Score=28.62  Aligned_cols=43  Identities=16%  Similarity=0.150  Sum_probs=32.5

Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       226 i~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +.+.++| .+..++++..+.++|.+           ...+.++.|-.|..|+|+-
T Consensus        81 ~~v~~~~-q~E~Drlwnal~~~g~e-----------~~~cgW~kDKfGVSWQi~p  123 (151)
T COG3865          81 FQVACDD-QEEIDRLWNALSDNGGE-----------AEACGWLKDKFGVSWQIVP  123 (151)
T ss_pred             EEEEcCC-HHHHHHHHHHHhccCcc-----------hhcceeEecccCcEEEEcH
Confidence            4445566 77788887777888862           1357899999999999975

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=81.28  E-value=23  Score=27.87  Aligned_cols=86  Identities=14%  Similarity=0.159  Sum_probs=43.6

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCC-----CCcceEEEEeecCCCCcccCCCCceE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP-----EQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      -..++||++.|++.+.+.++-+..+..-..-.... =++..++.+.+..     +..--.+|++++..  ..-+-.|.-|
T Consensus        32 ~~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~-INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~--K~Yp~eGWEH  108 (185)
T PF06185_consen   32 QYEIDHIALRVNSNETAERWKQALLQCGELLSENM-INGRPICLFKLNQPLQFGGWSIDCVELPYPKD--KRYPQEGWEH  108 (185)
T ss_dssp             T-EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEE-ETTEEEEEEEEEEEEEETTEEEEEEEEE---S--S--SS-EEEE
T ss_pred             ccCCcEEEEecCCHHHHHHHHHHHHHhChhhhhce-eCCeeEEEEEcCCchhcCCeeEEEEEeCCCCC--CCCCCCCceE
Confidence            46789999999999999999999886643332222 1223333332211     01112356665433  2224458999


Q ss_pred             EEEEECC-HHHHHHH
Q 022840           96 LAIATED-VYKMVEN  109 (291)
Q Consensus        96 i~~~v~d-~~~~~~~  109 (291)
                      |-|.++. .+...++
T Consensus       109 IE~Vip~~~~~~~~~  123 (185)
T PF06185_consen  109 IEFVIPSDAQTLLEQ  123 (185)
T ss_dssp             EEEE--S-GGGHHHH
T ss_pred             EEEEecCCHHHHHHH
Confidence            9999964 3333333

; PDB: 1K4N_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		1e-36
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-27
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		1e-30
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		8e-20
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		3e-23
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		6e-12
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-10
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		1e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		6e-09
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		1e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-09
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-08

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 91/124 (73%)
Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118
Query: 274 WKTVLVDNED 283
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           YGVTSY     +GH+AI  EDV ++V ++R     +  E       +   AFV DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYY 121
Query: 142 FELIQ 146
            EL+ 
Sbjct: 122 IELLN 126

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           +   M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--ITSFVDP 271
           VT Y    AY  +AI  +DV           +EL   + +   PI   +    +   VDP
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAFVVDP 117
Query: 272 DGWKTVLVDNEDFLKELQSE 291
           DG+   L++ +  +++ +++
Sbjct: 118 DGYYIELLNEKTMMEKAEAD 137

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T ++Y +  GM++LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
             +FV ELTYNYGV  Y +G  F  + +A+    + V N R       +   PL  +   
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASS---QAVSNAR-------KLEWPLTEVAEG 135
Query: 131 FAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
               + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +  +  
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ-- 193
Query: 190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST--------DDVYKSAE--- 238
              A+LGYA  D    LEL    G  ++    A+ ++A S         +D+ K      
Sbjct: 194 --RALLGYA--DNQCKLELQGVKGGVDHAA--AFGRIAFSCPQKELPDLEDLMKRENQKI 247
Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
           +  LV+ +  GK T Q          +    DPDG +   V +E F
Sbjct: 248 LTPLVSLDTPGKATVQ----------VVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 32/158 (20%)
Query: 17  PKKDKRRFL--HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF------- 67
           P    + FL    + R+ D  +++ +YT   G+ LL+K D P  K+S  FL +       
Sbjct: 23  PDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIP 82
Query: 68  --GPEQSYF------VVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENI 110
               E++ +       +ELT+N+G       SY  G     GFGH+ IA  DVY   +  
Sbjct: 83  KDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 111 RAKGGNVTREP--GPLKGMTTHFAFVKDPDGYIFELIQ 146
              G    ++P  G +KG+    AF++DPDGY  E++ 
Sbjct: 143 EELGVKFVKKPDDGKMKGL----AFIQDPDGYWIEILN 176

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 48/194 (24%)
Query: 120 EPGPLK-GMT--THFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G+T  T F+   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 177 MKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVTE----- 216
           + LL+ +D P +K +L  L Y +++               +   LEL +++G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GPIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 165
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 166 DPDGYWIEILNPNK 179

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY------------ 73
             + RV D  +++ +YT   GM L++K D P  K+S  FL +  +               
Sbjct: 33  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 92
Query: 74  ---FVVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    ++P
Sbjct: 93  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 152
Query: 122 --GPLKGMTTHFAFVKDPDGYIFELIQ 146
             G +KG+    AF++DPDGY  E++ 
Sbjct: 153 DDGKMKGL----AFIQDPDGYWIEILN 175

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 201
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 202 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 146
Query: 250 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 282
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 147 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY------------ 73
             + RV D  +++ +YT   GM L++K D P  K+S  FL +  +               
Sbjct: 37  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 96
Query: 74  ---FVVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    ++P
Sbjct: 97  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 156
Query: 122 --GPLKGMTTHFAFVKDPDGYIFELIQ 146
             G +KG+    AF++DPDGY  E++ 
Sbjct: 157 DDGKMKGL----AFIQDPDGYWIEILN 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 201
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 94
Query: 202 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 95  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 150
Query: 250 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 282
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 151 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 182

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY-------------- 73
           + RV D  +++ +YT   GM L++K D P  K+S  FL +  +                 
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 74  -FVVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTREP-- 121
              +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    ++P  
Sbjct: 95  KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD 154
Query: 122 GPLKGMTTHFAFVKDPDGYIFELIQ 146
           G +KG+    AF++DPDGY  +++ 
Sbjct: 155 GKMKGL----AFIQDPDGYWIQILN 175

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 201
           L + MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 202 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 146
Query: 250 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 282
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 147 KFVKKPDDGKMKGL-----AFIQDPDGYWIQILNPNK 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	5e-60
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-34
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	2e-58
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	7e-36
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-42
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-28
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-36
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	8e-18
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-32
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	8e-17
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	1e-31
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	1e-14
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-30
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-14
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-28
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	8e-11
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-06
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-28
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	7e-16
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	7e-28
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-15
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-24
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-12
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-23
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-10
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-23
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-10
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-22
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-09
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	8e-21
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-09
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	7e-18
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	6e-13
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-17
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-06
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-17
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-14
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-16
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	5e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-15
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-04
3huh_A	152	Virulence protein STM3117; structural genomics, ny	5e-15
3huh_A	152	Virulence protein STM3117; structural genomics, ny	5e-06
3ghj_A	141	Putative integron gene cassette protein; integron	2e-14
3ghj_A	141	Putative integron gene cassette protein; integron	2e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-14
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-06
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-14
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	4e-05
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-14
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-05
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	1e-13
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	5e-06
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-13
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	8e-13
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	4e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-12
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	3e-08
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-12
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	4e-09
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-12
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-04
1nki_A	135	Probable fosfomycin resistance protein; potassium	3e-12
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-04
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	7e-12
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	9e-12
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-06
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-11
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-11
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	1e-11
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	3e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-11
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-08
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-11
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	6e-11
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-04
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	8e-11
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	8e-11
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-10
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	6e-05
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-10
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	4e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-10
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-04
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	4e-10
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	6e-10
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	6e-10
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-07
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	8e-10
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	3e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	3e-05
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	7e-09
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	2e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-06
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-08
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	5e-08
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	7e-07
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-07
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	9e-07
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-06
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-06
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-06
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-06
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	4e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	2e-05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	3e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  186 bits (475), Expect = 5e-60
 Identities = 69/143 (48%), Positives = 87/143 (60%), Gaps = 5/143 (3%)

Query: 21  KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            RR LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
           NYGVTSY     +GH+AI  EDV ++V ++R     +  E       +   AFV DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGY 120

Query: 141 IFELIQRGPTPEPLCQVMLRVGD 163
             EL+      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  120 bits (304), Expect = 2e-34
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
             M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
            Y    AY  +AI  +DV +    +    ++    I  +          +   VDPDG+ 
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYY 121

Query: 276 TVLVDNEDFLKELQSE 291
             L++ +  +++ +++
Sbjct: 122 IELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  182 bits (464), Expect = 2e-58
 Identities = 70/132 (53%), Positives = 92/132 (69%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  124 bits (313), Expect = 7e-36
 Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 6/134 (4%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
             MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDGW 274
           +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I  FV DPDG+
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIA-FVEDPDGY 119

Query: 275 KTVLVDNEDFLKEL 288
           K  L++ +D  + L
Sbjct: 120 KIELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  143 bits (361), Expect = 2e-42
 Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)

Query: 1   MAEASPAAA---NAELLEW-----PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRK 52
           MAE  PA++   +           P          + R+ D  +++ +YT   G+ LL+K
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 53  RDVPEEKYSNAFLGFGPEQSY---------------FVVELTYNYGV-----TSYDIG-- 90
            D P  K+S  FL +  +                    +ELT+N+G       SY  G  
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNS 120

Query: 91  --TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG 148
              GFGH+ IA  DVY   +     G    ++P    G     AF++DPDGY  E++   
Sbjct: 121 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPN 178

Query: 149 PTPEPL 154
                +
Sbjct: 179 KIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  105 bits (264), Expect = 4e-28
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 43/195 (22%)

Query: 120 EPGPLKGMTTH---FAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P     T    F+   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 177 MKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVTE----- 216
           + LL+ +D P +K +L  L Y +++               +   LEL +++G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DP 271
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P        K  +F+ DP
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAFIQDP 167

Query: 272 DGWKTVLVDNEDFLK 286
           DG+   +++      
Sbjct: 168 DGYWIEILNPNKIAT 182

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  125 bits (316), Expect = 5e-36
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +  H    V  +   + +Y     ++LL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHLAIATEDVYKMVENIRAKGGNV-TREPGPLKGMTTHFAFV--KDP 137
            +  +    G G  H+AI  + + + ++ ++  G  +   EP P        AF+  +  
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 138 DGYIFELIQRGPTPEPL 154
            G ++E  ++    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 77.9 bits (192), Expect = 8e-18
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            + + V  +   + FY  +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 216 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDP 271
           ++ +  G     +AI    + +  + V    +E G ++     P+PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMI-NDEPVPGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  116 bits (292), Expect = 1e-32
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 5/130 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  H    V DL++   +Y    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV--KD 136
             +  +   +   G  H+ I  +++   V +++ K      E   +        F+  KD
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 137 PDGYIFELIQ 146
             G + EL Q
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 74.4 bits (183), Expect = 8e-17
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 11/124 (8%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            V + V DL ++  FY+  LG ++   +  PE   ++  +         +  L     + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV--- 269
            +    K      + I  D++  +   +    ++   +   +     G + K   F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEE-VKIGAHGKPVIFLHPK 122

Query: 270 DPDG 273
           D  G
Sbjct: 123 DCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  113 bits (284), Expect = 1e-31
 Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ----SYFVVE 77
           +   H    V D D++ ++Y    G E++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAF 133
             Y              G  HLA   EDV    + + A G  +  E       T    AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 134 VKDPDGYIFELIQ 146
             DPDG   EL +
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 68.6 bits (168), Expect = 1e-14
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 12/124 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGY----AEEDQTTVLELAYSY 212
           V L V D  +S +FY   LG +++R    P+       L       E     + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 213 GVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                +          +A   +DV  S + +      LG ++            K+  F 
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 270 DPDG 273
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  110 bits (277), Expect = 1e-30
 Identities = 31/126 (24%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H      +   T  +Y E  G E+LR+   PE+      L  G  Q   +      
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQF 62

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAFVKDPDGY 140
               SY    G  HLA   E + +++  +  +G  +  EP  +   T     F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 141 IFELIQ 146
             EL +
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 67.8 bits (166), Expect = 1e-14
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V +   +   +  FY + LG ++LR    PE       L      +  +           
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQFPARPS 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
           Y +      +A   + + +    +     E G  I  +P  +     K  +F  DPDG
Sbjct: 68  YPEALGLRHLAFKVEHIEEVIAFL----NEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  109 bits (273), Expect = 2e-28
 Identities = 50/255 (19%), Positives = 74/255 (29%), Gaps = 36/255 (14%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTSYD 88
             D     K+YT  FG        VP     YS A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 89  IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG 148
           +   +    IA +DV  +V+ +   GG V      +       +F+ DP G    L Q  
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQAN 151

Query: 149 P--------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE 200
                        L    L       ++ FYE  +G+       +      +   G AE 
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 201 DQTTVLELAYSYGVTEYTKGN--AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 258
                       G  E        +  V  + DD   +A          GG++  +P  I
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIAEPADI 256

Query: 259 PGLNTKITSFVDPDG 273
           P    +     DP G
Sbjct: 257 PS-VGRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 60.3 bits (146), Expect = 8e-11
 Identities = 23/136 (16%), Positives = 38/136 (27%), Gaps = 14/136 (10%)

Query: 16  WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFV 75
               +    +         D  + +Y    G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV----- 211

Query: 76  VELTYNYGVTSYDIGTGFGH--LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF 133
                  G     +     H  +  A +D         A GG V  EP  +  +   FA 
Sbjct: 212 ------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAV 264

Query: 134 VKDPDGYIFELIQRGP 149
           + DP G IF +++  P
Sbjct: 265 LSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 22/115 (19%), Positives = 35/115 (30%), Gaps = 10/115 (8%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYT 218
           L+  D   + KFY    G         P      +M   A  +   V  +A         
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSM---ATLNGEAVAAIAPMPPGAPEG 93

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               +    I+ DDV    + V       GG++      I     +++   DP G
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  104 bits (261), Expect = 5e-28
 Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 14/133 (10%)

Query: 23  RFLHAVYR--VGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
           + L  + R  V DL+  +++Y E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G                 + + K    +   G  + R P  +         V+  DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGS 111

Query: 141 IFELIQRGPTPEP 153
           + E ++       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 72.2 bits (177), Expect = 7e-16
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
             L V DL  +++FYE+ L   +    + P+    LA +        T+L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEE 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
             K     Q     D + K    +    +E G +I R P  +P    +  +    DG   
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVI 113

Query: 277 VLVD 280
             V+
Sbjct: 114 EYVE 117

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  103 bits (259), Expect = 7e-28
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 10/131 (7%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +  H  Y V ++D  +K +     +E          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH-FAFVKD 136
           G  S        G+   H+    ED+ K +E +   G  + ++      +     AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 137 PDGYIFELIQR 147
            D  + EL+++
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 70.9 bits (174), Expect = 1e-15
 Identities = 16/123 (13%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +   V ++  ++K +++   ++    +     K  +  +          +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDS 66

Query: 217 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-D 270
                  KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+  
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 271 PDG 273
            D 
Sbjct: 123 TDI 125

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 94.8 bits (235), Expect = 3e-24
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 5/127 (3%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R       V D  +   +YT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
            VT +    +  G    + A +D+    E + A G   T+EP  +  +    A + D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCG 143

Query: 140 YIFELIQ 146
            + +L+Q
Sbjct: 144 NLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 62.1 bits (150), Expect = 4e-12
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           +    + V D  ++  FY   LG  +   +     +    +   A +    +LE +    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 214 VTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVD 270
           VT + +      +   + + DD+    E +      LG + T++P  +           D
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDD 140

Query: 271 PDG 273
             G
Sbjct: 141 TCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 92.7 bits (230), Expect = 1e-23
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +  H      +L++  ++Y   FG       +   + +++ FL F       ++  T   
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVT 62

Query: 83  GVTSYDIGTGFGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
           G  +     G+ H+AI+    E V ++ E +R  G  +  EP    G   + + V DP+G
Sbjct: 63  G-KTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEG 120

Query: 140 YIFELI 145
              E+ 
Sbjct: 121 NRIEIT 126

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 56.5 bits (136), Expect = 2e-10
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 9/120 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L   +L +  +FY    G       ++         L + +      LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---ARLEIMSRTDVTG 63

Query: 217 YTKGNA--YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
            T G    +A +AIST       E+   + ++ G  I     P    +    S V DP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKL-RQDGFAIAG--EPRMTGDGYYESVVLDPEG 120

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 92.6 bits (230), Expect = 2e-23
 Identities = 27/140 (19%), Positives = 42/140 (30%), Gaps = 12/140 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--------KYSNAFLGFGPEQSY 73
           R+  H    V D+  +  +Y    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATEDVY--KMVENIRAKGGNVTREPGPLKGMTTHF 131
           F                T   HLA   +     + V  I      +    GP+   T   
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRG 135

Query: 132 AFVKDPDGYIFELIQRGPTP 151
            +  DPDG++ E+       
Sbjct: 136 VYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 26/125 (20%), Positives = 39/125 (31%), Gaps = 12/125 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALA---MLGYAEEDQTTVLELAYSYG 213
           + L V D+  S  FY   LG+  L   + P     L     +        T+L+L     
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 214 VTE-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 268
           ++               +A   D       V  +   E    I    GP+     +   F
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVI--GENKIAIA--HGPVTRPTGRGVYF 138

Query: 269 VDPDG 273
            DPDG
Sbjct: 139 YDPDG 143

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 88.2 bits (218), Expect = 8e-22
 Identities = 20/133 (15%), Positives = 45/133 (33%), Gaps = 16/133 (12%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ----SYFVVELTY 80
           +       D++ +  ++ +  G E+  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK-------GMTTHFAF 133
             G   + +G+G  +      D+  + + +     +        K         T     
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFM 121

Query: 134 VKDPDGYIFELIQ 146
           V+ PDGY+F   Q
Sbjct: 122 VQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 52.7 bits (126), Expect = 7e-09
 Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 8/121 (6%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--DQTTVLELAYSYGVT 215
            L   D+  S  F+   LG ++    + P+ +     L   +   +        +  G  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 216 EYTKGNAYAQVAISTDDVYKS-AEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPD 272
           E+  G+          D+      V       +   +  +             F    PD
Sbjct: 68  EFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 273 G 273
           G
Sbjct: 127 G 127

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 85.7 bits (212), Expect = 8e-21
 Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 22/144 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV-----------PEEKYSNAFLGFGPE 70
            R  +    V  LD  I ++ E  G+ L  + +V             +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 68

Query: 71  QSYFVVELTYNYGVTSYDI-------GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGP 123
            S   +EL+      +            G+  +    ED+ +MV  +   G  +  E   
Sbjct: 69  HS--RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 124 LKGMTTHFAFVKDPDGYIFELIQR 147
            +  +    +++  +G +  L + 
Sbjct: 127 YEN-SYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 26/135 (19%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS-----------PELKCALAMLGYAEEDQTTV 205
           V + V  L  +I F+E  +G+ L    +                  +AM+     D  + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT--PDGHSR 71

Query: 206 LEL-AYSYGVTEYTKGNA------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 258
           +EL  +    T      A      Y +V  + +D+ +    +     + G ++  +    
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQY 127

Query: 259 PGLNTKITSFVDPDG 273
              + ++      +G
Sbjct: 128 EN-SYRLCYIRGVEG 141

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 77.6 bits (191), Expect = 7e-18
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 5/118 (4%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG 90
             D DR   +Y + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG 148
           T    + +  E +   +E I + GG       P+  M    A+  D +G +  L +  
Sbjct: 90  TTPV-VTVDVESIESALERIESLGGKTVTGRTPVGNMGF-AAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 64.2 bits (156), Expect = 6e-13
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 9/124 (7%)

Query: 150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA 209
               +    +   D  R+  FY  A G  +    + P++  ++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 210 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
            + G+ +  +      V +  + +  + E +    + LGGK      P+  +      F 
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFT 132

Query: 270 DPDG 273
           D +G
Sbjct: 133 DSEG 136

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 77.1 bits (190), Expect = 1e-17
 Identities = 21/134 (15%), Positives = 37/134 (27%), Gaps = 14/134 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE---- 77
              +       DLD    +Y + FG+E++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHLAI---ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV 134
                         G GH         +V +      A    V        G  ++  ++
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNG--SYSVYI 119

Query: 135 KDPDGYIFELIQRG 148
           +DP G   E+ +  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 18/119 (15%), Positives = 32/119 (26%), Gaps = 8/119 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV 214
             L   DL  +  FY    G++++  +       KC   ML   +  ++     A +   
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQES---SRADANNP 68

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                           DD  +  E      + L   +           +      DP G
Sbjct: 69  IPRHGAVGQGHFCFYADDKAEVDEWKTRF-EALEIPVE--HYHRWPNGSYSVYIRDPAG 124

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 75.3 bits (185), Expect = 4e-17
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 8/121 (6%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
             G LD  I++Y E   ++ + +       Y     G       + +E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD--YHLEFTQYEGGSTAPV 74

Query: 90  GTGFGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ 146
                 L        ++  +   ++  G        P          ++DPDG+    + 
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDPDGWRIVFMN 132

Query: 147 R 147
            
Sbjct: 133 S 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 68.4 bits (167), Expect = 2e-14
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 6/123 (4%)

Query: 160 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK 219
             G L   I+FYE+ L +K +             M G         LE     G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGL--PHADYHLEFTQYEGGSTAPV 74

Query: 220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 279
            +  + +     +  + A + + + + +G +        P  +    +  DPDGW+ V +
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFM 131

Query: 280 DNE 282
           +++
Sbjct: 132 NSK 134

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 73.3 bits (180), Expect = 2e-16
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 12/123 (9%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
           +     VG  +    +Y E  GME + K +   +K    +   G ++ +  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
                     H A     + +  + +  +G  V  +      +     +V DP G   E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFGNRIEF 121

Query: 145 IQR 147
           ++ 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 44.1 bits (104), Expect = 5e-06
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
           QV   VG    +  FY + +GM+ +   +  + +         +E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +       A  A     + +  + +     + G ++       P          DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQEL----IKQGIEVIDDH-ARPD--VIRFYVSDPFG 116

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 70.1 bits (171), Expect = 5e-15
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 8/127 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  H V  V D+  TI++Y E  G   +  +       +   L FG ++     +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA--FVKDPDG 139
               S           I +  +  +V  I   G ++   P    G T      +++DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 140 YIFELIQ 146
            + E+ Q
Sbjct: 136 NLIEISQ 142

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 44.6 bits (105), Expect = 5e-06
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           ++L V D+  +I+FYE+ LG   +      + + AL             +E         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQKINLHQQEMEFEPKASRPT 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
               +     +   +DV            + G  I   P    G   +I S    DPDG
Sbjct: 84  PGSADLCFITSTPINDVVSEI-------LQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 17/127 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV-ELTY 80
           +       +V +L+++ ++YTE  G E          ++   FL         V+ E   
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRW--NFLWVSGRAGMVVLQEEKE 82

Query: 81  NYGVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
           N+            H +  +   ++  + + + +KG +V   P   + M     +  DP+
Sbjct: 83  NWQQQ---------HFSFRVEKSEIEPLKKALESKGVSV-HGPVNQEWMQAVSLYFADPN 132

Query: 139 GYIFELI 145
           G+  E  
Sbjct: 133 GHALEFT 139

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
           V ++V +L +S +FY + LG +      +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSA 60

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 67.6 bits (165), Expect = 2e-14
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 8/120 (6%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGV 84
           H  + V DL+R  +     F    +   D  +       F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
              +         I   D  +  E +   G ++ R P P         +  D D ++FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDM-RPPRPRVEGEGRSIYFYDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +   V DL R  +  E     + +    S   + +L+   +        + +A   G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVY--ASDTEQFSLSREKFFLIGD---IWVAIMQGEKL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +   +    I   D  + AE V     +LG  +      + G   +   F D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 67.2 bits (164), Expect = 5e-14
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 12/130 (9%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
              H    V  L+ +I ++    G                    +   ++Y V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREP-GPLKGMTTHFA-FVK 135
             T       TG  HLA      E V ++ + ++ +G  +  E   P  G   H+A F +
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCE 134

Query: 136 DPDGYIFELI 145
           DP+    E++
Sbjct: 135 DPNRIKVEIV 144

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 6/119 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V + V  L  SI F++  LG        S     +            T           +
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GPIPGLNTKITSFV-DPDG 273
            T  N  A  A S + V +  + +    +E G  I  +   P  G       F  DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 66.3 bits (162), Expect = 7e-14
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DLD + ++YTE    + L +     +  S A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 86  SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             +   G  HL+ +     D+  + E +   G   T      +         +D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDADNIAL 122

Query: 143 ELIQRGP 149
           E +    
Sbjct: 123 EAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 6/117 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L V DL  S ++Y + L  K L          + A           + E         
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTT--SFAHGVLPGGLSIVLREHDGGGTDLF 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                    ++ S + +     +   +  + G   T            I +F D D 
Sbjct: 67  DETRPGLDHLSFSVESMTDLDVLEERL-AKAGAAFT---PTQELPFGWILAFRDADN 119

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 65.1 bits (159), Expect = 1e-13
 Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 19/125 (15%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
              H    V D+    ++  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDNDG-FILTLMKGK 54

Query: 83  GVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
            V          H+       E V K+ + ++  G     EP        +  +V+ P G
Sbjct: 55  EVQ----YPKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPK--HAHAYTFYVEAPGG 106

Query: 140 YIFEL 144
           +  E+
Sbjct: 107 FTIEV 111

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           + L V D+  + +F EK  G+    T  +              ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
           Y K         S + V K  + +    +E G  +     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRL----KEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 65.6 bits (160), Expect = 2e-13
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 17/127 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H    V DL +++ ++ E  G+ L  + +      + A+L  G       V L+Y+
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLW----VCLSYD 52

Query: 82  YG---VTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
                V   +         +A ED   + + +   G  + ++            +  DPD
Sbjct: 53  EARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPD 108

Query: 139 GYIFELI 145
           G+  EL 
Sbjct: 109 GHKLELH 115

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
           + L V DL +S+ F+ + LG+ L    ++
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 66.4 bits (162), Expect = 8e-13
 Identities = 38/283 (13%), Positives = 77/283 (27%), Gaps = 64/283 (22%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H   RV D+ + +++Y E  G+       +  +     +L    E   F + L       
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLR------ 58

Query: 86  SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
                 G   +       + + ++  ++ A G  V + P             + P G+ F
Sbjct: 59  -EADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 143 ELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           EL                        +G         ++   +L  +   + K LG  L 
Sbjct: 118 ELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLA 177

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELA--------YSYGVTEYTKGNAYAQVAISTDD 232
             +           L  + +                  S+ +              + +D
Sbjct: 178 EQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLE-------------TWED 224

Query: 233 VYKSAEVVNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGW 274
           + ++A+++          I   P          I  F DP G 
Sbjct: 225 LLRAADLI----SMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            RF HA+    +L  T   +T+  G  L  +           FL    +         ++
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--------AHD 200

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVKD 136
                +       H++      ED+ +  + I     ++   P    L        +  D
Sbjct: 201 VAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGK--TIYFFD 258

Query: 137 PDGYIFEL 144
           P G   E+
Sbjct: 259 PSGNRNEV 266

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 63.5 bits (154), Expect = 1e-12
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD-VPEEKYSNAFLGFGPEQSYFVVELTY 80
           ++       +GDL+ + ++Y E FG   + +   +   + +   L     Q+   ++   
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQN---LQEDV 60

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
              VTS        H   A  +V  ++E + A GG + R             +V DPDG+
Sbjct: 61  GVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGH 119

Query: 141 IFEL 144
           I+E+
Sbjct: 120 IWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVT 215
           + L +GDL  S +FY +  G   +         +    +L            L    GV 
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQ-----NLQEDVGVA 63

Query: 216 EYTKGNAY--AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             ++  +   A    +  +V    E +       GG++ R     P    +     DPDG
Sbjct: 64  VTSRPGSMALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHGGLRGY-VADPDG 118

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 63.0 bits (153), Expect = 1e-12
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 13/146 (8%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RF++ +  V D++R+  +Y +  G+++L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
              + +  G     L     DV    ++I A    +             F    DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 142 FELIQRGPTPEPLCQVMLRVGDLGRS 167
            E+       E L Q    +   G S
Sbjct: 122 IEVG------ESLSQSGENLYFQGGS 141

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 53.4 bits (128), Expect = 4e-09
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSY 212
               +  V D+ RS  FY   LG+K+L    S    +   A+     E ++    +  + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIH----EGRSLEETIWRTS 64

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
              +   G     +     DV  + + +         ++            ++  F DPD
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDI-----APHVELIHPLERQAW-GQRVFRFYDPD 118

Query: 273 G 273
           G
Sbjct: 119 G 119

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 62.4 bits (151), Expect = 2e-12
 Identities = 17/132 (12%), Positives = 33/132 (25%), Gaps = 11/132 (8%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
             ++     H      DLD    +Y    G +L R+            +         V 
Sbjct: 3   AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVC 54

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP---GPLKGMTTHFAF 133
            L+  +          FG      +    + +  + +G     +               F
Sbjct: 55  HLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF 114

Query: 134 VKDPDGYIFELI 145
           + DP   + E  
Sbjct: 115 LIDPSNNLLEFK 126

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 38.2 bits (88), Expect = 8e-04
 Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 9/117 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           + +   DL  +  FY   LG KL R       +  L   G        V  L+  +    
Sbjct: 13  LAIPARDLDEAYDFYVTKLGCKLAR---RYPDRITLDFFGD-----QLVCHLSDRWDREV 64

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                 +              ++           ++R+   +   +      +DP  
Sbjct: 65  SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF-LIDPSN 120

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 61.7 bits (150), Expect = 3e-12
 Identities = 26/125 (20%), Positives = 37/125 (29%), Gaps = 18/125 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H    V DL  +I +Y +  G  L  + D        A+L  G         L  +
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLW------LCLS 50

Query: 82  YGVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
                      + H A  IA  D  +    +RA G                  +  DPDG
Sbjct: 51  REPQYGGPAADYTHYAFGIAAADFARFAAQLRAHG----VREWKQNRSEGDSFYFLDPDG 106

Query: 140 YIFEL 144
           +  E 
Sbjct: 107 HRLEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
           + L V DL  SI FY   LG +L    D 
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 60.7 bits (147), Expect = 7e-12
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 10/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H V  V D+  T  +Y +  GM+ +              L FG ++     +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHLA-IATEDVYKMVENIRAKGGNVTREPGPLKGMT--THFAFVKDPD 138
           +   + ++  G   L  I    +   ++++  +G  +   P    G        + +DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 139 GYIFEL 144
           G + E+
Sbjct: 122 GNLIEV 127

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 60.6 bits (147), Expect = 9e-12
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGV 84
           H    V DL++T  +    F  E +              F           + +    G 
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------LWICIMEGD 60

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
           +  +         I +E+V +  E I+A G  + +   P         +  D D ++FEL
Sbjct: 61  SLQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           + L V DL ++  F +     + +    S +   +L+   +        L +    G + 
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIY--SSGDKTFSLSKEKFFLIAG---LWICIMEGDSL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +   +    I +++V +  E +    + LG ++ +   P      +   F D D 
Sbjct: 63  QERTYNHIAFQIQSEEVDEYTERI----KALGVEM-KPERPRVQGEGRSIYFYDFDN 114

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 62.8 bits (152), Expect = 1e-11
 Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 32/184 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
                      +LDR + +YT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQF------- 71

Query: 82  YGVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLK---GMTTHFAFVKD 136
               + D    F H+A  IA     +    +   G  +T              +  +V+D
Sbjct: 72  --RAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVED 129

Query: 137 PDGYIFELIQRGPTPEP------------LCQVMLRVGDLGRSIKFYEKALGMKLLRTID 184
           P G I ELI R                  + ++ +   D+ ++    ++A     L  I+
Sbjct: 130 PSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE 189

Query: 185 SPEL 188
              L
Sbjct: 190 PAGL 193

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 37/264 (14%), Positives = 76/264 (28%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           +    V DL ++ ++Y +  G+ +  + +      +  +L    E  +  + L    G  
Sbjct: 20  YMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR--QGPI 71

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI 145
           +      +     +  +V       +  G    R              V+DP G+ +E  
Sbjct: 72  AAVAAFAYR--VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC 190
                                  L        D+ R   + E  LG ++   I   +   
Sbjct: 130 YETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVT 188

Query: 191 ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +   +    T L       +      +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKQTVHDTALTGGNGPRM------HHVAFATHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGPIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPDG 
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDGH 264

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 60.5 bits (146), Expect = 1e-11
 Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR  H V  V  +  T  +Y++  GME++  ++          L FG +Q + + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHLA-IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA--FVKDPD 138
           +   +     G   +  I    + +M+++++A    +   P P  G        + +DPD
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138

Query: 139 GYIFELI 145
             + E+ 
Sbjct: 139 RNLIEVS 145

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +++ V  +  +  FY K LGM+++   +          L + ++                
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
           +    +     I+   + +  + +    +     I   P P  G    I S  F DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 60.1 bits (145), Expect = 2e-11
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 14/137 (10%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL--GFGPEQSYFVVELTY 80
              H  Y   D D   KYY E FG   L + + PE+      +       +    V++  
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 68

Query: 81  NYGVTS--------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG-MTTHF 131
                S        ++   G  H+A   +D+  +   +R +G  +  +  P  G      
Sbjct: 69  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRI 127

Query: 132 AFV--KDPDGYIFELIQ 146
            F+  K   G + EL Q
Sbjct: 128 NFMHPKSGKGVLIELTQ 144

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 59.6 bits (144), Expect = 2e-11
 Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 12/132 (9%)

Query: 19  KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFV 75
           K+     +      D+     +Y + FG + +     P         + +GF   ++Y +
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYEL 63

Query: 76  VELTYNYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFA 132
           ++L         +       L       E V K+V    A G  + + P          A
Sbjct: 64  MQLAQFS-----ETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQ-A 117

Query: 133 FVKDPDGYIFEL 144
            + DP+  +F +
Sbjct: 118 VLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 50.7 bits (121), Expect = 3e-08
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 14/122 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYG 213
           V +   D+     FY++  G + + +I SP    L    + +G+   +     EL     
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGF---NAHEAYELMQLAQ 68

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQ--ELGGKITRQPGPIPGLNTKITSFVDP 271
            +E +       +    D       V  LV      G  + + P      +      +DP
Sbjct: 69  FSETSGI--KFLLNFDVDTK---EAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDP 122

Query: 272 DG 273
           + 
Sbjct: 123 ER 124

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R + A     +  R   +Y +  GM +                   P +++  V      
Sbjct: 7   RRVVANIATPEPARAQAFYGDILGMPVAMDHGWI------VTHA-SPLEAHAQVSFAREG 59

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           G      GT    L+I  ++  ++   I   G  +   P           F++DP G + 
Sbjct: 60  GS-----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRL-FLRDPFGKLI 113

Query: 143 ELIQRG 148
            ++   
Sbjct: 114 NILSHA 119

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 61.2 bits (148), Expect = 6e-11
 Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 36/178 (20%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
            A         T+ ++T+  GM +  +         + +L    +   + +++T      
Sbjct: 14  RAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT--EAPE 65

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI 145
           +            + E + +  +++     + T       G    F + + PDG+  +L+
Sbjct: 66  AGMGHAAMR--TSSPEALERRAKSLTDGNVDGTWSEDQF-GYGKTFEY-QSPDGHNLQLL 121

Query: 146 ------------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
                                    +G   + +  + L   D+      +E+ LG + 
Sbjct: 122 WEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRT 179

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 20/128 (15%), Positives = 31/128 (24%), Gaps = 14/128 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +R  H      D+      +    G     +R V       A++                
Sbjct: 152 KRIDHLNLMSSDVTAVKDSFERHLGFR-TTERVVDGNVEIGAWMSSNLLG------HEVA 204

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVKD 136
                        HLA      +     VE  R     +   P    +      F +V +
Sbjct: 205 CMRDMTGGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQ--FLYVFE 262

Query: 137 PDGYIFEL 144
           P G   EL
Sbjct: 263 PGGNRIEL 270

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 60.8 bits (147), Expect = 8e-11
 Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           +A   V DL ++  +Y +  G+ +  + +      +  +L    E  +  + LT   G  
Sbjct: 20  YAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT--KGPV 71

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI 145
           +      F       EDV K     +  G    R              V+DP G+ +E  
Sbjct: 72  AALKAMAFR--VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC 190
                                  L        D+ R  K+ E  LG ++   I   E   
Sbjct: 130 FETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTT 188

Query: 191 ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +             A + G     + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKGTVHD----TALTGG--NGPRLHHVAFSTHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGPIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPD  
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDNH 264

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 60.3 bits (146), Expect = 1e-10
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 39/184 (21%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  HA  RV +L+  I +Y    G+          +     +     E+ +    +   
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYIIR-- 59

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREP-GPLKGMTTHFAFVKDP 137
                     G             + K+  +++A G   TR P G +        F + P
Sbjct: 60  -----EADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 138 DGYIFELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKAL 175
            G++ EL                       + G  P  L   +L   ++    K + + L
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVL 173

Query: 176 GMKL 179
           G  L
Sbjct: 174 GFYL 177

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 20/129 (15%), Positives = 36/129 (27%), Gaps = 16/129 (12%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMEL-LRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            +  H +    ++    K +TE  G  L  R      +     +L    +         +
Sbjct: 150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKV--------H 201

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVK 135
           +     Y       H +      E V +  + +     NV   P    +        +  
Sbjct: 202 DIAFVEYPEKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGC--TIYAW 259

Query: 136 DPDGYIFEL 144
           DP G  FE 
Sbjct: 260 DPSGNRFET 268

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 14/129 (10%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
              D DR + +    FG  LL ++        +A L  G      +V  T      S   
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF-----AFVKDPDGYIFEL 144
           G     + +   DV +      A G ++ +                   V+D +G+++E 
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPL------QDKPWGLRQYLVRDLEGHLWEF 119

Query: 145 IQRGPTPEP 153
            +      P
Sbjct: 120 TRHLRDVPP 128

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 8/117 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L   D  R++ +  +  G +LL    +       A L         ++          
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
              G+   QV +   DV +            G  I +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEG 114

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 58.7 bits (142), Expect = 4e-10
 Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 31/171 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTYNYGV 84
           +  Y V D D    +Y + +G+E + +        +NA+    G ++ + V        +
Sbjct: 11  YVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQ-------L 57

Query: 85  TSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF-VKDPDGY 140
              D       +A+A     DV  +  ++ A G  V  EP  L      + F    PDG 
Sbjct: 58  RRAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGL 116

Query: 141 IFEL-----------IQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +FE+           + R    P  +  ++L   +    +KF+   LG K+
Sbjct: 117 LFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 39.5 bits (92), Expect = 7e-04
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 22/128 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            +  H V    +    +K++T+  G            K S+    F      F+   + +
Sbjct: 140 VKISHIVLHSPNHQDMVKFFTDVLGF-----------KVSDWLGDFM----CFLRCNSAH 184

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVKD 136
           + +          H+A      +D+ +    ++ KG ++   PG       T  F++   
Sbjct: 185 HRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNT--FSYFVT 242

Query: 137 PDGYIFEL 144
           P G++ E 
Sbjct: 243 PGGFVTEY 250

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 29/147 (19%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGF 67
           R  +     V D++ +++ Y E FG+E  +                   + +   AF   
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL 77

Query: 68  GPEQSYFVVELTYNYGVTSY------DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
           GP Q    +EL       S         G G  H+A   +D+ + VE +  KG  V ++ 
Sbjct: 78  GPLQ----LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK- 132

Query: 122 GPLKGMTTHFAFV--KDPDGYIFELIQ 146
           G  +G    +A++        + EL++
Sbjct: 133 GDFEG--GRYAYIDTLRALKVMIELLE 157

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 58.0 bits (140), Expect = 6e-10
 Identities = 26/179 (14%), Positives = 48/179 (26%), Gaps = 42/179 (23%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTYNYGV 84
           +  + V D+     + T+  G+      D      +              V +       
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQ------- 53

Query: 85  TSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPD 138
                                + +M + ++  G  VT     L   +G+T    F  DP 
Sbjct: 54  ---GEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFA-DPF 109

Query: 139 GYIFELI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           G   E+                         + L   +  V D  +++ FY   LG +L
Sbjct: 110 GLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQL 168

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 58.1 bits (140), Expect = 6e-10
 Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 36/188 (19%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY--G 83
           H      + +    +Y    G+  + K  V ++  S   L +G +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPL 91

Query: 84  VTSYDIGTG-FGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFA----FVK 135
           V     GT     + +     + ++   E         +        MTT+        +
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHS-------EMTTYANRPALQFE 144

Query: 136 DPDGYIFELIQRGPTPEPLCQ------------------VMLRVGDLGRSIKFYEKALGM 177
           D +G    L+          +                  V L V  L +      +  G 
Sbjct: 145 DAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGY 204

Query: 178 KLLRTIDS 185
             +   D 
Sbjct: 205 TEVSRNDQ 212

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 20/136 (14%)

Query: 21  KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            +        V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF---- 133
           +        G    HLAI      ++    E ++ +G + +       G+   F F    
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKNDAELAYWEEQVKQRGFHSS-------GIIDRFYFKSLY 284

Query: 134 VKDPDGYIFELIQRGP 149
            ++ +G +FE+   GP
Sbjct: 285 FRESNGILFEIATDGP 300

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 58.0 bits (139), Expect = 8e-10
 Identities = 37/288 (12%), Positives = 77/288 (26%), Gaps = 53/288 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             F H      D       ++   G  L  + D+     ++A L        F+    Y 
Sbjct: 30  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 89

Query: 82  YGVTSYDI-----------------GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPL 124
           +G  +                    G     +A+   D         A G      P  L
Sbjct: 90  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 149

Query: 125 K-----------GMTTHFAFVKDPDGYI-------FELIQRGPTPEP----LCQVMLRVG 162
                       G      +V  PDG         FE +      +        ++  V 
Sbjct: 150 GRGFRLAEVELYGDVVLR-YVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVP 208

Query: 163 DLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGVT- 215
           +L  +  ++    G        + ++        ++ +   +E     + E  +      
Sbjct: 209 ELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRS 268

Query: 216 ------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGP 257
                 ++  G     +A+++DDV ++   +   +   G +    P  
Sbjct: 269 QIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTS 316

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 53.4 bits (128), Expect = 3e-09
 Identities = 19/124 (15%), Positives = 29/124 (23%), Gaps = 10/124 (8%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
                      L   + +Y    G +    +     +   A              L    
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHNG------VEFSLYSIQ 58

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
                        L     D+ K V+ +    G       P        A V DPDG+  
Sbjct: 59  NPQRS--QIPSLQLGFQITDLEKTVQELVKIPG-AMCILDPTDMPDGKKAIVLDPDGHSI 115

Query: 143 ELIQ 146
           EL +
Sbjct: 116 ELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 14/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            + +    L   + FY   +G +   +              +          L YS    
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDK------GSEVHRAVHNGVEFSL-YSIQNP 60

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +        Q+     D+    + V  + +  G      P  +P     I   +DPDG
Sbjct: 61  Q-RSQIPSLQLGFQITDL---EKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 52.5 bits (126), Expect = 7e-09
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRD----VPEEKYSNAFLGFGPEQSYFVVEL 78
           R       V D+ +++++Y +  G+E+  + D              L +   +   V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVE--TVRSY 60

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
              +   +             T  V K    +   G     +P         +A VKDPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPD 119

Query: 139 GYIFELIQRGP 149
           G + +L    P
Sbjct: 120 GNVVDLFAPLP 130

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 54.1 bits (129), Expect = 2e-08
 Identities = 45/271 (16%), Positives = 88/271 (32%), Gaps = 49/271 (18%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
            K ++ RFL      + VG+  +   +Y    G E L  R +               +  
Sbjct: 2   AKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYN-----YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--G 126
           FV+    N      G      G G   +A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKF 121

Query: 127 MTTHFAFVKDPDGYIFELIQRG-----------------PTPEPLCQVMLRV-------- 161
               FA ++        L+++                  P    L +  L +        
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQ 181

Query: 162 --GDLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYG 213
              ++  + ++Y K L      ++D  ++        ++ +  Y E  +  + E A    
Sbjct: 182 PDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKK 241

Query: 214 VT------EYTKGNAYAQVAISTDDVYKSAE 238
            +      +Y  G     +A+ T+D+  +  
Sbjct: 242 KSQIQEYVDYNGGAGVQHIALKTEDIITAIR 272

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 17/126 (13%), Positives = 35/126 (27%), Gaps = 14/126 (11%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYN 81
                   V ++ +           +     D   +    +  L     Q++ V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
            G+           + I  EDV +  + +   G  V   P      T     V+ P G +
Sbjct: 63  SGII----------IHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESL-LVQGPAGLV 111

Query: 142 FELIQR 147
            +  + 
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE-EDQTTVLELAYSY 212
           L Q+ + V ++ +     E  L  K              A  G+A+    +  L L+ ++
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNH 54

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
            V      +    + I  +DV ++ + +     ELG K+   P       T+      P 
Sbjct: 55  LVPLENFQSG-IIIHIEVEDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPA 108

Query: 273 G 273
           G
Sbjct: 109 G 109

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 52.7 bits (126), Expect = 4e-08
 Identities = 38/277 (13%), Positives = 68/277 (24%), Gaps = 41/277 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R   +      D+    +Y  +  GM                +L      +  VV     
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVE-----GKGAPEGALYLRMDDFPARLVVV---- 54

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDG 139
            G     +  G+       E + ++   +  +G                       DP G
Sbjct: 55  PGEHDRLLEAGWE--CANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSG 112

Query: 140 YIFELI-------QRGPTPEP---------LCQVMLRVGDLGRSIKFYEKALGMKLLRTI 183
              E+        +R  +P           +  V+L   D   ++ FY   LG +L  ++
Sbjct: 113 NCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSM 172

Query: 184 DSPELKCALAMLGYAE-----EDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 238
             P         G                LA+    T  +            DDV    +
Sbjct: 173 RLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTS-SGIVHLMVEVEQADDVGLCLD 231

Query: 239 VVNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGW 274
                       ++   G  +  L         P G+
Sbjct: 232 RA----LRRKVPMSATLGRHVNDLMLSFY-MKTPGGF 263

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 51.9 bits (124), Expect = 5e-08
 Identities = 40/288 (13%), Positives = 73/288 (25%), Gaps = 59/288 (20%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           +  + V D+     + T+  G+             +  +          V       G  
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLMA-----AGSAGDAALYRADQRAWRIAVQP-----GEL 56

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDGYIFE 143
                 G          + +M + +R  G   TR    L           ++DP G   E
Sbjct: 57  DDLAYAGLE--VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLE 114

Query: 144 LI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL---LRT 182
           +                         + +   +  V D  +++ FY + LG  L   +  
Sbjct: 115 IYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDI 174

Query: 183 IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNL 242
              PE       L            +A +       + + +   A + DDV  + + +  
Sbjct: 175 QMGPETSVPAHFLHC----NGRHHTIALAAFPIP-KRIHHFMLQANTIDDVGYAFDRL-- 227

Query: 243 VTQELGGKITRQPGPI---PG--LNTKITSF--VDPDGWKTVLVDNED 283
                        G I    G   N +  SF    P     V      
Sbjct: 228 ----------DAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP 265

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 50.9 bits (121), Expect = 1e-07
 Identities = 21/179 (11%), Positives = 47/179 (26%), Gaps = 23/179 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-AFLGFGPEQSYFVVELTYNYGV 84
           H    VG       +Y    G+ L+++    ++  +   + G    +   ++      G 
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 85  TSYDIGTGFG---HLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
               IG G        +    +    + +      V        G    +    DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFN--VPYTKIERFGE--QYVEFDDPHGLH 126

Query: 142 FELIQRGPTPEPLCQ---------------VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
            E+++R                          L      ++    E  +G++ +     
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD 185

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 48.9 bits (116), Expect = 7e-07
 Identities = 29/187 (15%), Positives = 47/187 (25%), Gaps = 36/187 (19%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
           P    + F  A       D+T        G+E + K                 +    + 
Sbjct: 147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVID 200

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAF 133
                 G      GT   H+A    D          I + G  VT        +     F
Sbjct: 201 LKLTPIGRGQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT-------PVRDRNYF 252

Query: 134 ----VKDPDGYIFELIQRGP---TPEPLCQVMLRVGDLGRSIK---FYE--KALGMKLLR 181
                ++    +FE+    P     E           +G  +     YE  +    + L 
Sbjct: 253 NAIYFREHGEILFEIATDPPGFAHDET-------QETMGEKLMLPVQYEPHRTQIEQGLL 305

Query: 182 TIDSPEL 188
             +  EL
Sbjct: 306 PFEVREL 312

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 38/274 (13%), Positives = 75/274 (27%), Gaps = 47/274 (17%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           +    V D D    + T+  G+++     + E +    +L         VV     +   
Sbjct: 12  YMGISVKDPDAWKSFATDMLGLQV-----LDEGEKDRFYLRMDYWHHRIVVH----HNGQ 62

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV--KDPDGYIFE 143
                 G+        +   + + +   G  +                +  +DP G   E
Sbjct: 63  DDLEYLGWR--VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTE 120

Query: 144 LI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTID 184
           +                    +     + L   ++R  D+  + KFY   LG +      
Sbjct: 121 IFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSL-LGFRGDVEYR 179

Query: 185 SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVT 244
            P      A L +   +      +A+        + N         +D+  + +      
Sbjct: 180 IPLPNGMTAELSFMHCN-ARDHSIAFGAM-PAAKRLNHLMLEYTHMEDLGYTHQQF---- 233

Query: 245 QELGGKITRQPG--PIPGLNTKITSF--VDPDGW 274
            +    I  Q G       N K  +F    P GW
Sbjct: 234 VKNEIDIALQLGIHA----NDKALTFYGATPSGW 263

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 48.4 bits (115), Expect = 9e-07
 Identities = 38/279 (13%), Positives = 79/279 (28%), Gaps = 57/279 (20%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           +    V +LD    Y     GM++     V + +    +L         V+         
Sbjct: 9   YLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMDRWHHRIVLH-------- 55

Query: 86  SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVK--DPDGY 140
             D      ++        ++ ++ E ++  G                   VK  DP G 
Sbjct: 56  -ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGN 114

Query: 141 IFELI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL-- 179
             E+                    +     + L  +++R  D+  + +FY          
Sbjct: 115 PTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGLEGAVE 174

Query: 180 LRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
            +             +   +   +    LA+  G     + N         DD+  + ++
Sbjct: 175 YKFALPNGAVGTPVFMHCNDRHHS----LAFGVG-PMDKRINHLMIEYTHLDDLGYAHDL 229

Query: 240 VNLVTQELGGKITRQPG--PIPGLNTKITSF--VDPDGW 274
           V    ++    +T Q G       N +  +F   +P GW
Sbjct: 230 V----RQQKIDVTLQIGKHS----NDEALTFYCANPSGW 260

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 48.4 bits (114), Expect = 1e-06
 Identities = 35/277 (12%), Positives = 74/277 (26%), Gaps = 60/277 (21%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +RF H  +  GD     + ++   GM    K D+      +A          F+    Y+
Sbjct: 24  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 83

Query: 82  YGVTSYDI-----------------------GTGFGHLAIATEDVYKMVENIRAKGGNVT 118
             +++ +I                       G G   +AI  ED         A G   +
Sbjct: 84  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 143

Query: 119 REP------------GPLKGMTTHFAFVKDPDGYI------------FELIQRGPTPEPL 154
             P                 +   +   K  D                           L
Sbjct: 144 SPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRL 203

Query: 155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLEL 208
              +  V +LG ++ +     G        + ++        +  +    E     + E 
Sbjct: 204 DHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEP 263

Query: 209 AYSYGVT-------EYTKGNAYAQVAISTDDVYKSAE 238
            +            E+ +G     +A+ ++D++++  
Sbjct: 264 VHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLR 300

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 17/127 (13%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
           +     + D+   +  + +  G EL  +        + A+L         + E       
Sbjct: 9   ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIP 62

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF-----AFVKDPDG 139
                G     + I   D+  +   +     N+  +   ++ +           V+ PDG
Sbjct: 63  D----GIARVAICIDVSDIDSLHTKLSPALENLPAD--QVEPLKNMPYGQREFQVRMPDG 116

Query: 140 YIFELIQ 146
                  
Sbjct: 117 DWLNFTA 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 15/118 (12%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLL-RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            L + D+  ++  +   LG +L  R  +   L+ +   L   EE    ++          
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPARKIIP--------- 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDG 273
              G A   + I   D+      ++   + L          +P G   +      PDG
Sbjct: 63  --DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG--QREFQVRMPDG 116

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 14/129 (10%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY 87
           VY   D+D+T+K++ E  G          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 88  DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP-----GPLKGMTTHFAFVKDPDGYI- 141
                     +  E +  + + ++  G +   +      G           +   DG I 
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG------ARECSITTTDGCIL 139

Query: 142 --FELIQRG 148
             FE IQ G
Sbjct: 140 RFFESIQEG 148

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 15/129 (11%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
                +  V +   + ++Y    G++        E   + +            + L   +
Sbjct: 25  HPDFTILYVDNPPASTQFYKALLGVD------PVESSPTFSLFVLANG---MKLGLWSRH 75

Query: 83  GVT-SYDIGTGFGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
            V     +  G G LA        V +     +A G  + ++P  ++   T      DPD
Sbjct: 76  TVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT--FTAADPD 133

Query: 139 GYIFELIQR 147
            +   +   
Sbjct: 134 SHRLRVYAF 142

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
             ++ V +  ++ ++Y      + +      E   + A            + L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 86  -SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
                  G   L+      E V ++      K  ++ + P  +     +     DPD + 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHR 117

Query: 142 FELIQRGPTPEPL 154
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 44.5 bits (105), Expect = 4e-06
 Identities = 21/130 (16%), Positives = 35/130 (26%), Gaps = 20/130 (15%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
                  D D T  +Y    G  ++ +            L  G     F       +   
Sbjct: 6   TPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHP 51

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF------AFVKDPDG 139
             D    +    +  +D+ +     ++ G   T    P              A + DPDG
Sbjct: 52  GLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

Query: 140 YIFELIQRGP 149
            +  LIQ   
Sbjct: 112 TLLRLIQNEL 121

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 19/139 (13%), Positives = 33/139 (23%), Gaps = 17/139 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-------AFLGFGPEQSYFVVEL 78
             +     +   + +Y   FG         P+ K          + L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH---FAFVK 135
           +     T+   G+G     + T+D    V      G                      V 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVT----EAEVELGFKGKVT 143

Query: 136 DPDGYIFELIQRG--PTPE 152
           DP G  +   ++    T E
Sbjct: 144 DPFGVTWIFAEKKTVITDE 162

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 18/125 (14%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
             +  V +++R+  +Y   F  E +          +  ++ F        +   ++ G  
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFV--------TPRYVAFPSSGD--ALFAIWSGGEE 65

Query: 86  SYDIGTGFGHLAIATED------VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
                  F  + I          ++      ++    V +EP            + DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDG 123

Query: 140 YIFEL 144
           +I  +
Sbjct: 124 HIIRV 128

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 37/216 (17%), Positives = 66/216 (30%), Gaps = 63/216 (29%)

Query: 13  LLE-WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV----PEEKYSNAFLGF 67
           L+E  PK +    + ++Y   +L   ++          L +  V      + + +  L  
Sbjct: 416 LVEKQPK-ESTISIPSIYL--ELKVKLENEYA------LHRSIVDHYNIPKTFDSDDLIP 466

Query: 68  GPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA--TEDV---------YKMVEN-IRAKGG 115
                YF     Y++      IG    HL      E +         ++ +E  IR    
Sbjct: 467 PYLDQYF-----YSH------IGH---HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDST 512

Query: 116 NVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKAL 175
                 G +        F K    YI +     P  E L      V  +   + F  K  
Sbjct: 513 AWN-ASGSILNTLQQLKFYKP---YICD---NDPKYERL------VNAI---LDFLPKI- 555

Query: 176 GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS 211
              L+ +  +  L+ AL        +   + E A+ 
Sbjct: 556 EENLICSKYTDLLRIAL------MAEDEAIFEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 42/277 (15%), Positives = 76/277 (27%), Gaps = 101/277 (36%)

Query: 14  LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           +   + + RR L +           K Y  C    LL   +V   K  NAF         
Sbjct: 227 IHSIQAELRRLLKS-----------KPYENC----LLVLLNVQNAKAWNAFNL----SCK 267

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA- 132
            ++  T    VT +        L+ AT     +  +                 +T     
Sbjct: 268 ILL-TTRFKQVTDF--------LSAATTTHISLDHH--------------SMTLTPDEVK 304

Query: 133 --FVKDPDGYIFELIQRGPTPEPLCQVM-LRVGDLGRSIK-------FYEKALGMKLLRT 182
              +K  D    +L      P  +      R+  +  SI+        ++     KL   
Sbjct: 305 SLLLKYLDCRPQDL------PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 183 IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV--------- 233
           I+S     +L +L  AE  +                    + ++++              
Sbjct: 359 IES-----SLNVLEPAEYRK-------------------MFDRLSVFPPSAHIPTILLSL 394

Query: 234 ---YKSAEVVNLVTQELGGK--ITRQPGP----IPGL 261
                    V +V  +L     + +QP      IP +
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 40/263 (15%), Positives = 74/263 (28%), Gaps = 46/263 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +     V+ VG+  +   YY+  FGM+L+            A        + FV+     
Sbjct: 21  KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 80

Query: 82  YGVTSYDI--------GTGFGHLAIATEDVYKMVENIRAKGGNVTREP--GPLKGMTTHF 131
                           G G   LAI   D           G     EP     +  T   
Sbjct: 81  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 140

Query: 132 AFVKDPDGYIFELIQRG--------------PTPEPLCQVMLRV----------GDLGRS 167
           A +         L+ R               P  EP      +           G +   
Sbjct: 141 AAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEW 200

Query: 168 IKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGVT------ 215
           + FY K +G   ++     ++        +  +     + +  + E A +   +      
Sbjct: 201 VGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL 260

Query: 216 EYTKGNAYAQVAISTDDVYKSAE 238
           E+  G     +A++T D+ ++  
Sbjct: 261 EFYGGAGVQHIALNTGDIVETVR 283

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	100.0
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	100.0
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	100.0
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	100.0
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	100.0
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	100.0
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	100.0
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.97
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.96
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.94
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.94
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.87
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.84
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.83
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.82
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.82
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.82
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.81
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.8
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.8
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.8
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.8
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.79
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.78
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.78
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.78
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.77
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.77
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.76
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.76
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.76
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.76
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.76
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.76
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.76
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.75
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.74
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.74
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.74
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.74
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.74
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.73
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.73
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.73
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.73
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.72
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.72
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.72
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.72
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.72
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.72
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.72
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.71
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.71
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.7
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.7
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.7
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.7
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.7
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.69
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.69
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.69
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.68
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.68
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.68
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.67
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.67
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.67
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.67
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.66
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.66
3ghj_A	141	Putative integron gene cassette protein; integron	99.66
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.66
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.66
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.66
2i7r_A	118	Conserved domain protein; structural genomics cons	99.66
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.66
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.65
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.65
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.64
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.64
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.64
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.64
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.64
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.64
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.64
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.63
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.63
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.62
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.62
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.62
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.62
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.61
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.61
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.61
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.61
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.61
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.61
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.6
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.59
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.58
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.58
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.56
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.56
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.54
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.54
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.54
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.53
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.52
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.51
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.49
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.49
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.49
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.49
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.48
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.48
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.43
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.41
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.39
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.38
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.34
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.32
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.31
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.27
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.24
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.17
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.14
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.08
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.07
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.07
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.06
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.0
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.73
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.66
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.23
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.04
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.51
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.1
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	94.0
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	90.31
3ghx_A	179	Adenylate cyclase CYAB; CYTH domain, antiparallel	81.19

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=3.6e-35  Score=253.40  Aligned_cols=247  Identities=32%  Similarity=0.563  Sum_probs=189.9

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC-----------CCCeeEEEeccCCCCcceEEEEeecCCCC
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELTYNYGVT   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~   85 (291)
                      ..|++++++||+|.|+|++++++||+++|||++..+....           ++.+..+++.+++......+++....+..
T Consensus        21 ~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           21 QSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             eecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC
Confidence            3467899999999999999999999999999998776654           34566778777655556678877755544


Q ss_pred             cccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC-CCCCceEEEeeeCCc
Q 022840           86 SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP-TPEPLCQVMLRVGDL  164 (291)
Q Consensus        86 ~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~-~~~~~~~v~l~v~D~  164 (291)
                      .+..+.|+.||+|.|+|+   .++++++|+++...+    ++   ++||+||||+.|||++... .+.++.|+.|.|+|+
T Consensus       101 ~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~~---~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl  170 (330)
T 3zi1_A          101 DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----EG---VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDL  170 (330)
T ss_dssp             CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----TT---EEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCH
T ss_pred             ccccCCCeeEEEEECchH---HHHHHHcCCceeccC----Cc---eEEEECCCCCEEEEEecCCCCCCceeEEEEECCCH
Confidence            555667899999999997   678888999876543    22   4789999999999999763 567899999999999


Q ss_pred             cccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec--chHHHHHHHHH
Q 022840          165 GRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNL  242 (291)
Q Consensus       165 ~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~--d~~~~~~~l~~  242 (291)
                      +++.+||+++|||++.......+    ..++.+++.  ...+++.....  +...+.++.|++|.|+  |++++++++  
T Consensus       171 ~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl--  240 (330)
T 3zi1_A          171 QKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM--  240 (330)
T ss_dssp             HHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH--
T ss_pred             HHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH--
Confidence            99999999999999887654322    344554443  45566654332  1223467889999996  567777777  


Q ss_pred             HHHHhCCEeecCCccc--CC-CCceEEEEECCCCceEEEecchhhh
Q 022840          243 VTQELGGKITRQPGPI--PG-LNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       243 ~~~~~G~~~~~~p~~~--~~-~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                        +++|+++..+|...  ++ .+.+++||+||+|+.|||++.....
T Consensus       241 --~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          241 --KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             --HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             --HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence              99999988877542  21 1358899999999999999987765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=1.6e-33  Score=244.29  Aligned_cols=241  Identities=13%  Similarity=0.140  Sum_probs=177.8

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      +.+.+++|+||.|.|+|++++++||+++|||++..+..   +   ..++..........+.+....       ..++.|+
T Consensus         5 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~~-------~~g~~~~   71 (339)
T 3lm4_A            5 ARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q---SVYLRGYEDPYPWSLKITEAP-------EAGMGHA   71 (339)
T ss_dssp             GGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T---EEEEECTTCSSSCSEEEEECS-------SCEEEEE
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C---EEEEEecCCCCceEEEEeeCC-------CCCcceE
Confidence            34578999999999999999999999999999876522   1   344543222112223333321       2368999


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC------------------------
Q 022840           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP------------------------  149 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~------------------------  149 (291)
                      +|.|+|   +++++++|+++|+++...+. ..++.. .++|+||+||.|||+....                        
T Consensus        72 af~v~~~~dld~~~~~l~~~G~~~~~~~~-~~~~~~-~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  149 (339)
T 3lm4_A           72 AMRTSSPEALERRAKSLTDGNVDGTWSED-QFGYGK-TFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGI  149 (339)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEECC-STTBCC-EEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSS
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeccC-CCCceE-EEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCC
Confidence            999987   89999999999999876654 333333 4789999999999986521                        


Q ss_pred             CCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++..... .++.....|+..+..  +..+.+.....    ....+++|++|.
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~  222 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFF  222 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEE
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEE
Confidence            23459999999999999999999999999887654 333345667765543  34555554211    124578999999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |+|   ++++.++|    +++|+++..+|.++...+.+++||+||+|+.|||+...+
T Consensus       223 v~d~~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          223 YGTGQHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             CCCHHHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             eCCHHHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            999   55566666    999999998888766545688999999999999986443

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=2.9e-33  Score=241.21  Aligned_cols=237  Identities=19%  Similarity=0.215  Sum_probs=176.8

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      +++++++++||.|.|+|++++++||+++|||++....   ++   ..++..........+.+...       ...+..|+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~---~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~   77 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---EN---TIYLRSLEEFIHHNLVLRQG-------PIAAVAAF   77 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS---EEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---CC---EEEEEecCCCCcEEEEEEEC-------CCCCeeEE
Confidence            5578999999999999999999999999999987643   11   44555322221223334332       12367899


Q ss_pred             EEEE---CCHHHHHHHHHHcCCeeecCCc-cCCCCceEEEEEECCCCcEEEEEEcCCC---------------CCCceEE
Q 022840           97 AIAT---EDVYKMVENIRAKGGNVTREPG-PLKGMTTHFAFVKDPDGYIFELIQRGPT---------------PEPLCQV  157 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~DP~G~~iel~~~~~~---------------~~~~~~v  157 (291)
                      +|.|   +|+++++++|+++|+++...+. ..+++.. .++|+||+|+.|||++....               +.++.|+
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  156 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD-SVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHF  156 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCS-EEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcce-EEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeE
Confidence            9999   7899999999999999877665 3334334 47899999999999976421               3458999


Q ss_pred             EeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHH--
Q 022840          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK--  235 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~--  235 (291)
                      .|.|+|++++.+|| ++|||++.......++.....|+..+..  +..+.+...       .+++++|++|.|+|+++  
T Consensus       157 ~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~  226 (323)
T 1f1u_A          157 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATHEKHNII  226 (323)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHH
T ss_pred             EEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECCCHHHHH
Confidence            99999999999999 9999998876544444344556665432  334544321       12488999999999888  


Q ss_pred             -HHHHHHHHHHHhCC--EeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          236 -SAEVVNLVTQELGG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 -~~~~l~~~~~~~G~--~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                       +.++|    +++|+  ++..+|.++...+++++||+||+|+.||+...
T Consensus       227 ~~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          227 QICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             HHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence             66666    99999  88877777665567889999999999999763

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=7.9e-33  Score=237.06  Aligned_cols=240  Identities=15%  Similarity=0.142  Sum_probs=172.9

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEecc-CCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF-GPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      |.+++|+||.|.|+|++++++||+++|||++..+..  .+   ..++.. +... ...+.+....       ..+..|++
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~-~~~l~l~~~~-------~~~~~h~a   70 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERD-HSCYIIREAD-------TAGIDFFG   70 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCB-SCSEEEEECS-------SCEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCC-ceEEEEEeCC-------CCceeEEE
Confidence            347899999999999999999999999999876532  11   344443 3212 1233333321       23678999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeecCCcc-CCCCceEEEEEECCCCcEEEEEEcCC----------------------CC
Q 022840           98 IATED---VYKMVENIRAKGGNVTREPGP-LKGMTTHFAFVKDPDGYIFELIQRGP----------------------TP  151 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~~DP~G~~iel~~~~~----------------------~~  151 (291)
                      |.|+|   +++++++|+++|+++...+.. ..++. ..+||+||+||.|||++...                      .+
T Consensus        71 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  149 (309)
T 3hpy_A           71 FKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETG-ERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAP  149 (309)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBC-CEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCC
T ss_pred             EEECCHHHHHHHHHHHHhCCCceeeccCCccCCCe-eEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccc
Confidence            99986   999999999999997765543 23333 35889999999999997542                      12


Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-cceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++........ +.....|+..++.  ...+.+...      +...+++|++|.|
T Consensus       150 ~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v  221 (309)
T 3hpy_A          150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLL  221 (309)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEEC
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEEC
Confidence            458999999999999999999999999876653322 2235566665443  233443331      1234689999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +|++++.+.+ ++|+++|+++..+|.++...+.+++||+||+|+.|||...
T Consensus       222 ~d~~~v~~~~-~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          222 ESWEQVLRAG-DIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             SSHHHHHHHH-HHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             CCHHHHHHHH-HHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            9866544333 4449999999888877666557889999999999999865

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=1.3e-32  Score=239.78  Aligned_cols=241  Identities=20%  Similarity=0.186  Sum_probs=180.8

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      +...|++|.||.|.|+|++++++||+++|||+++.+...      .++|..........+.+...       ...++.|+
T Consensus        11 P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~~------~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~   77 (365)
T 4ghg_A           11 PAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDEN------QIYLRSFEEFIHHNLVLTKG-------PVAALKAM   77 (365)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcCC------EEEEEeCCCCcceEEEeccC-------CCCCcceE
Confidence            346799999999999999999999999999998765321      55665543333333444332       12378899


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC---------------CCCCceEEE
Q 022840           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP---------------TPEPLCQVM  158 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~---------------~~~~~~~v~  158 (291)
                      +|.|.+   ++++.++|+++|+.+...+.....+....++|.||+|+.|||+....               .+.++.|+.
T Consensus        78 a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~  157 (365)
T 4ghg_A           78 AFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFN  157 (365)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEE
Confidence            999965   78899999999998765544332222234789999999999986532               235699999


Q ss_pred             eeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHHH
Q 022840          159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~  238 (291)
                      +.|+|++++..||+. |||++++......+.....|+.+...  ++.+.+..       ...++++|++|.|+|++++..
T Consensus       158 L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~  227 (365)
T 4ghg_A          158 QVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTG-------GNGPRLHHVAFSTHEKHNIIQ  227 (365)
T ss_dssp             EEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECSSHHHHHH
T ss_pred             EeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeec-------CCCCceeEEEEecCCHHHHHH
Confidence            999999999999965 99999887766666566778886654  33444432       124589999999999877766


Q ss_pred             HHHHHHHHhCCE--eecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          239 VVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       239 ~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .. +++.++|+.  +..+|+++...+..++||+||+|++||+...
T Consensus       228 ~~-d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          228 IC-DKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             HH-HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             HH-HHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            55 666888884  6678888877677899999999999998654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=1.4e-32  Score=237.24  Aligned_cols=247  Identities=11%  Similarity=0.061  Sum_probs=170.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-CCeeEEEeccCCCCcceEEEEeecCCCCcccCC-CCceEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG-TGFGHL   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~i   96 (291)
                      |++++|+||+|.|+|++++.+||+++|||+++.+....+ .+...+++....+.....+++...........+ .++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            578999999999999999999999999999987654332 222334444322222345666553332222222 357899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC---------------CCCceEEEe
Q 022840           97 AIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT---------------PEPLCQVML  159 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~---------------~~~~~~v~l  159 (291)
                      +|.|+  |+++++++|+++|+++..  . ..++. ..+||+|||||.|||++..+.               ...|.||+|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~-~~~g~-~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--I-ERFGE-QYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--E-EETTE-EEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--e-ccCCc-EEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999998764  2 22333 358999999999999987531               134899999


Q ss_pred             eeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceee-ccCcceeEEEEEecchHHHHH
Q 022840          160 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       160 ~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~~~v~d~~~~~~  238 (291)
                      .|+|++++.+||+++|||++..+...    . .. +..++.  +..+.+....+.... .+..+++|+||.|+|.+++ .
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~~~~~~----~-~~-~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l-~  230 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERVGKEGD----F-VR-YRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQ-L  230 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEEEEETT----E-EE-EECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHH-H
T ss_pred             EECCHHHHHHHHHHHhCCEEeeccCC----E-EE-EEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHH-H
Confidence            99999999999999999998865321    1 22 222222  344555543322211 2234689999999984332 2


Q ss_pred             HHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      ++.++|+++|+++.. +..+..  .+++||+||+|+.|||...
T Consensus       231 ~~~~~L~~~G~~~~~-~~~r~~--~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          231 DWQRYIASHGYGVTP-VRDRNY--FNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             HHHHHHHHTTCCCCC-CEECSS--SEEEEEECTTSCEEEEEES
T ss_pred             HHHHHHHHCCCCccc-cccCCc--EEEEEEECCCCcEEEEEeC
Confidence            333444999998643 333222  4789999999999999875

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=4.2e-32  Score=232.59  Aligned_cols=233  Identities=21%  Similarity=0.288  Sum_probs=175.7

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +++++|.|+.|.|+|++++++||+++|||++.....    .  ..++..+.......+.+....       ..+..|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----N--NAWFKAQGADEHHVVQLRRAD-------ENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEECTTSCCSCSEEEEECS-------SCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----C--eEEEEECCCCCCEEEEEEECC-------CCCeeEEEE
Confidence            678999999999999999999999999999876431    1  455554331012234444321       236789999


Q ss_pred             EE---CCHHHHHHHHHHcCCeeecCCcc--CCCCceEEEEEECCCCcEEEEEEcCC------------CCCCceEEEeee
Q 022840           99 AT---EDVYKMVENIRAKGGNVTREPGP--LKGMTTHFAFVKDPDGYIFELIQRGP------------TPEPLCQVMLRV  161 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~DP~G~~iel~~~~~------------~~~~~~~v~l~v  161 (291)
                      .|   +|+++++++|+++|+++...+..  .+++.. .++|+||+|+.|||++...            .+.++.|+.|.|
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  149 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGY-GFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHS  149 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCE-EEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCce-EEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEec
Confidence            99   78999999999999998777654  444444 3789999999999998653            235689999999


Q ss_pred             CCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHH---HH
Q 022840          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS---AE  238 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~---~~  238 (291)
                      +|++++.+||+++|||++..+...     ...|+..+..  +..+.+...       . .|++|++|.|+|++++   .+
T Consensus       150 ~D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~~--~~~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~  214 (310)
T 3b59_A          150 PNHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNSA--HHRIAILPG-------P-PCLNHVAYDMLSVDDMMRGAH  214 (310)
T ss_dssp             TTHHHHHHHHHHTSCCEEEEEETT-----TEEEEESSSB--SCSEEEEES-------S-SEEEEEEEECSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCCC--cceEEEECC-------C-CceEEEEEEcCCHHHHHHHHH
Confidence            999999999999999998865421     2345554332  344554431       1 5789999999997777   56


Q ss_pred             HHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +|    +++|+++..+|.+++...++++||+||+|+.|||.+....
T Consensus       215 ~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  256 (310)
T 3b59_A          215 RL----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEE  256 (310)
T ss_dssp             HH----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCB
T ss_pred             HH----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccE
Confidence            66    9999999988887665556899999999999999886543

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=4.9e-32  Score=231.88  Aligned_cols=238  Identities=17%  Similarity=0.238  Sum_probs=169.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      .++++++||.|.|+|++++++||+++|||++.....  .+   ..++..+.....+.+.+...       ...+..|++|
T Consensus         3 ~~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f   70 (307)
T 1mpy_A            3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QG---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGF   70 (307)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TS---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CC---cEEEEecCCCCceEEEEccC-------CCCCcceEEE
Confidence            368999999999999999999999999999876432  11   24555433212222333221       1236789999


Q ss_pred             EE---CCHHHHHHHHHHcCCeeecCCc-cCCCCceEEEEEECCCCcEEEEEEcCC----------------------CCC
Q 022840           99 AT---EDVYKMVENIRAKGGNVTREPG-PLKGMTTHFAFVKDPDGYIFELIQRGP----------------------TPE  152 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~DP~G~~iel~~~~~----------------------~~~  152 (291)
                      .|   +|+++++++|+++|+++...+. ..+++.. .++|+||+|+.|||++...                      ...
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGR-RVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAV  149 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCC-EEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceE-EEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcC
Confidence            99   8899999999999999876664 2333333 4789999999999998531                      123


Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcc-eeEEEEEec
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA-YAQVAISTD  231 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g-~~hi~~~v~  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++........+.....|+..+..  +..+.+...       ...| ++|++|.|+
T Consensus       150 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~-------~~~g~~~hi~f~v~  220 (307)
T 1mpy_A          150 RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH-------PEKGRLHHVSFHLE  220 (307)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC-------SSSSEEEEEEEECS
T ss_pred             ceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC-------CCCCcceEEEEEcC
Confidence            489999999999999999999999998765432222112234443322  223444321       1234 799999999


Q ss_pred             c---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      |   +++++++|    +++|+++..+|...+...++.+||+||+|+.|||++..
T Consensus       221 d~~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  270 (307)
T 1mpy_A          221 TWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  270 (307)
T ss_dssp             CHHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecc
Confidence            5   45555666    99999998888765543467899999999999999864

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=100.00  E-value=6.1e-32  Score=230.56  Aligned_cols=236  Identities=11%  Similarity=0.132  Sum_probs=169.4

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEee-EeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLR-KRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      |++++|+||.|.|+|++++++||+++|||++.. ..   .+   ..++..+....  .+.+...       ...+..|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~~~--~l~l~~~-------~~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDFPA--RLVVVPG-------EHDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSSSC--SEEEEEC-------SSCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCCcE--EEEEecC-------CCCCcceEE
Confidence            568999999999999999999999999999865 32   11   34555443222  2333332       123678999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeecCCccC---CCCceEEEEEECCCCcEEEEEEc-CCC---------------CCCce
Q 022840           98 IATED---VYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPDGYIFELIQR-GPT---------------PEPLC  155 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~DP~G~~iel~~~-~~~---------------~~~~~  155 (291)
                      |.|++   +++++++|+++|+++...+...   +++.. .++|+||+||.|||++. ...               +.++.
T Consensus        66 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~  144 (300)
T 2zyq_A           66 WECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDE-MIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMG  144 (300)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceE-EEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccC
Confidence            99975   8899999999999976655431   23333 47899999999999987 211               24589


Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCc--------cc-ceeeeeeccccCCceeEEEEeeecCceeeccCcceeEE
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      |+.|.|+|++++.+||+++|||++.......        ++ .....|+..++.  +..+.+...      +...|++|+
T Consensus       145 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~g~~h~  216 (300)
T 2zyq_A          145 HVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPM------PTSSGIVHL  216 (300)
T ss_dssp             EEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESS------CCSSSEEEE
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecC------CCCCCceEE
Confidence            9999999999999999999999987543211        11 123445543322  233444331      124578999


Q ss_pred             EEEecchHHH---HHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          227 AISTDDVYKS---AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       227 ~~~v~d~~~~---~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +|.|+|++++   +++|    +++|+++..+|...+...++++||+||+|+.|||++..
T Consensus       217 af~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          217 MVEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EEEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            9999996654   5666    99999999888766554478899999999999998754

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=100.00  E-value=1.1e-31  Score=228.19  Aligned_cols=236  Identities=14%  Similarity=0.132  Sum_probs=168.9

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++++||+++|||++.....  .    ..++..+.....  +.+...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~--l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRAWR--IAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCS--EEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCceEE--EEEccC-------CCCCccEEEEEE
Confidence            7899999999999999999999999999876531  1    344554432222  323221       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCcc---CCCCceEEEEEECCCCcEEEEEEcCCC------------------CCCceE
Q 022840          101 E---DVYKMVENIRAKGGNVTREPGP---LKGMTTHFAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~DP~G~~iel~~~~~~------------------~~~~~~  156 (291)
                      +   |+++++++|+++|+++...+..   .+++.. +++|+||+||.|||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMG-LLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGH  145 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceE-EEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccce
Confidence            8   8999999999999998766543   123333 47899999999999986421                  135899


Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCc--cc-ceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      +.|.|+|++++.+||+++|||++.......  ++ .....|+..+..  +..+.+...      +...+++|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~  217 (292)
T 1kw3_B          146 FVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTI  217 (292)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSH
T ss_pred             EEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            999999999999999999999987543211  11 123345554322  233444321      1135789999999987


Q ss_pred             HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCc-eEEEecch
Q 022840          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~-~iel~~~~  282 (291)
                      +++.+.+ ++|+ +|+++..+|..++....+++||+||+|+ .|||....
T Consensus       218 ~~v~~~~-~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          218 DDVGYAF-DRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HHHHHHH-HHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHHHH-HHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            6654433 3348 9999988887766544678899999999 99998864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=100.00  E-value=4.7e-31  Score=228.77  Aligned_cols=247  Identities=12%  Similarity=0.060  Sum_probs=168.7

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-CCeeEEEeccCCCCcceEEEEeecCCCCc-ccCCCCceEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLA   97 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~g~~~i~   97 (291)
                      ++++|+||.|.|+|++++++||+++|||++.......+ ......++..+.......+.+........ .....+..|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            48999999999999999999999999999876542111 11122333322112234555554322211 11234678999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC------------------CCCceE
Q 022840           98 IATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~------------------~~~~~~  156 (291)
                      |.|+   |+++++++|+++|+++..++.  .+|. .++||+|||||.|||++....                  ..++.|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~--~~G~-~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT--YANR-PALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE--ETTE-EEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc--cCCc-EEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   699999999999999876544  2444 458899999999999987531                  235889


Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec---ch
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD---DV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~---d~  233 (291)
                      +.|.|+|++++.+||+++|||++..+..  +  + ..+....+......+.+.. ..........+++|++|.|+   |+
T Consensus       184 v~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~--~-~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~hiaf~v~~~~dv  257 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTEIFGYTEVSRND--Q--E-AIFQSIKGEAFGEIVVKYL-DGPTEKPGRGSIHHLAIRVKNDAEL  257 (338)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS--S--E-EEEESSTTCSTTCEEEEEC-CSSBCBCCBTCEEEEEEEESSHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEeecC--C--e-EEEEecCCCCceEEEEecc-CCCCCCCCCCceEEEEEEeCCHHHH
Confidence            9999999999999999999999876543  1  2 2222210111012233322 11111112346899999998   67


Q ss_pred             HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      ++++++|    +++|+++. +|....  +.+.+||+||+|+.|||++..
T Consensus       258 ~~~~~~l----~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          258 AYWEEQV----KQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHHH----HHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHH----HHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC
Confidence            7777887    99999985 555442  468899999999999999853

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.1e-31  Score=224.05  Aligned_cols=242  Identities=17%  Similarity=0.153  Sum_probs=168.7

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ..+.|+.|.|+|++++++||+++|||++...... .+......+..+. .  ....+....... ........+++|.|+
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~-~~~~~~~~~~~~g-~--~~~~l~~~~~~~-~~~~~~~~~~~~~v~  105 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVP-GGGGVYSMATLNG-E--AVAAIAPMPPGA-PEGMPPIWNTYIAVD  105 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETT-E--EEEEEEECCSCC----CCCEEEEEEECS
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCC-CCccCEEEEEeCC-e--eeEeeccCCCCC-CCCCCCcEEEEEEeC
Confidence            3799999999999999999999999998654321 1100122333221 1  122222221111 112234578999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC--------CCCCceEEEeeeCCccccHHHHHH
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP--------TPEPLCQVMLRVGDLGRSIKFYEK  173 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~--------~~~~~~~v~l~v~D~~~~~~Fy~~  173 (291)
                      |+++++++|+++|+++..++...++.. .+++|+||+||.|+|++...        .+.++.|+.|.|+|++++.+||++
T Consensus       106 d~d~~~~~l~~~G~~~~~~p~~~~~~g-~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~~  184 (282)
T 3oxh_A          106 DVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYEA  184 (282)
T ss_dssp             CHHHHHTTTTTTTCEEEEEEEEETTTE-EEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCEEEECCEecCCCe-EEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHHH
Confidence            999999999999999887777665433 35889999999999998763        356799999999999999999999


Q ss_pred             hcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeec
Q 022840          174 ALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR  253 (291)
Q Consensus       174 ~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~  253 (291)
                      +|||++..........+..  +..++   .....+... .   ....++.+|++|.|+|++++++++    +++|+++..
T Consensus       185 vlG~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~-~---~~~~~~~~~~~~~v~dvd~~~~~~----~~~G~~~~~  251 (282)
T 3oxh_A          185 VVGLTHSSMEIAAGQNYRV--LKAGD---AEVGGCMEP-P---MPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIA  251 (282)
T ss_dssp             HHCCEEEEC-------CEE--EEETT---EEEEEEECC-S---STTCCSEEEEEEECSCHHHHHHHH----HHTTCEEEE
T ss_pred             HhCCeeeeccCCCCcceEE--EEcCC---ccEeeecCC-C---CCCCCCeEEEEEEeCCHHHHHHHH----HHcCCEEec
Confidence            9999987543122222322  33222   111222111 1   122346689999999999999999    999999999


Q ss_pred             CCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          254 QPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       254 ~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      +|...++ +++++|++||+||.|||++..+
T Consensus       252 ~p~~~~~-~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          252 EPADIPS-VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEEETT-TEEEEEEECTTSCEEEEEEEC-
T ss_pred             CCeEcCC-CeEEEEEECCCCCEEEEEecCC
Confidence            8887765 5789999999999999998643

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=100.00  E-value=4.4e-31  Score=224.95  Aligned_cols=236  Identities=16%  Similarity=0.168  Sum_probs=172.3

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++++||+++|||++.....  .    ..++..+....  .+.+...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~~--~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRAW--RIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSC--SEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCcE--EEEEecC-------CCCCccEEEEEe
Confidence            6899999999999999999999999999876532  1    34555443222  2333321       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccC---CCCceEEEEEECCCCcEEEEEEcCCC------------------CCCceE
Q 022840          101 E---DVYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~DP~G~~iel~~~~~~------------------~~~~~~  156 (291)
                      +   |+++++++|+++|+++...+...   .++.. +++|+||+||.|||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTG-LITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGH  145 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSE-EEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCcee-EEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccce
Confidence            8   99999999999999877655421   13333 58899999999999986521                  146899


Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCc--c-cceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP--E-LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      +.|.|+|++++.+||+++|||++.......  + ......|+..++.  +..+.+...      +...+++|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~l~~~------~~~~~~~hiaf~v~d~  217 (297)
T 1lgt_A          146 FVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER--HHTLAIAAF------PLPKRIHHFMLEVASL  217 (297)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------CCSSSEEEEEEEBSCH
T ss_pred             EEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC--cceEEEEcC------CCCCCceEEEEeCCCH
Confidence            999999999999999999999987542211  1 0123345543322  234454431      1246789999999998


Q ss_pred             HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +++.+.+ ++ +++|+++..+|.+.+....+++||+||+|+.|||++..
T Consensus       218 ~~~~~~~-~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          218 DDVGFAF-DR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             HHHHHHH-HH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHH-HH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            8776665 66 88999999888777654456799999999999999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=100.00  E-value=1.7e-31  Score=228.40  Aligned_cols=237  Identities=13%  Similarity=0.163  Sum_probs=168.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.+++++||.|.|+|++++++||+++|||++....   ...  ..++..+.....  +.+....       ..+..|++|
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~---~~~--~~~~~~~~~~~~--l~l~~~~-------~~~~~~~~f   67 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG---EDD--RIYLRMDRWHHR--IVLHADG-------SDDLAYIGW   67 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS---CTT--EEEEECSSBSCS--EEEECSS-------CCEEEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc---CCC--eEEEEeCCCeEE--EEEEECC-------CCCeEEEEE
Confidence            34799999999999999999999999999987511   111  345555432222  4343221       236789999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCcEEEEEEc-CC------------------CCCCc
Q 022840           99 ATE---DVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQR-GP------------------TPEPL  154 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DP~G~~iel~~~-~~------------------~~~~~  154 (291)
                      .|+   |+++++++|+++|+++...|...  ..+....++|+||+||.|||++. ..                  .+.++
T Consensus        68 ~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (305)
T 2wl9_A           68 RVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGL  147 (305)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCS
T ss_pred             EECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCcee
Confidence            997   69999999999999987665432  12233457899999999999876 21                  12368


Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCc--cc-ceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++.......  ++ .....|+..+..  +..+.+...      +...+++|++|.|+
T Consensus       148 ~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~  218 (305)
T 2wl9_A          148 GHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYT  218 (305)
T ss_dssp             CEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEES
T ss_pred             eeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcC
Confidence            99999999999999999 99999986542211  11 123445554332  223433321      12367899999999


Q ss_pred             chH---HHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          232 DVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d~~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      |++   +++++|    +++|+++..+|..++..+.+++||+||+|+.|||+...
T Consensus       219 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          219 HLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            844   444555    99999998888776654467899999999999998854

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=100.00  E-value=1.7e-31  Score=227.99  Aligned_cols=241  Identities=13%  Similarity=0.092  Sum_probs=168.3

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      +|++++++||.|.|+|++++++||+++|||++.....  . .  ..++..+.....  +.+...       ...+..|++
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~   69 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K-D--RFYLRMDYWHHR--IVVHHN-------GQDDLEYLG   69 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S-S--EEEEESSSBSCS--EEEESS-------CCSEEEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C-c--ceEEEeCCCceE--EEEecC-------CCCCeeEEE
Confidence            4779999999999999999999999999999875321  1 1  345554322222  333321       123678999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCcEEEEEEcCC----C---------------CCC
Q 022840           98 IATE---DVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRGP----T---------------PEP  153 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~DP~G~~iel~~~~~----~---------------~~~  153 (291)
                      |.|.   |+++++++|+++|+++...+...+  .+....++|+||+||.|||++...    .               +.+
T Consensus        70 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (302)
T 2ehz_A           70 WRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQG  149 (302)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGC
T ss_pred             EEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCc
Confidence            9995   699999999999999776654322  122335789999999999997521    1               127


Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCc--cc-ceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      +.|+.|.|+|++++.+|| ++|||++.......  .+ .....|+..++.  ...+.+...      +...+++|++|.|
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v  220 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAM------PAAKRLNHLMLEY  220 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSC------CCSSSEEEEEEEE
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecC------CCCCceeEEEEEc
Confidence            899999999999999999 99999976432211  11 123445554322  223333221      1235789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +|++++.+.+ ++++++|+++..+|.+.+..+.+++||+||+|+.|||+...
T Consensus       221 ~d~~~v~~~~-~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          221 THMEDLGYTH-QQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             SSHHHHHHHH-HHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CCHHHHHHHH-HHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            9876544322 33499999999888776554567899999999999998753

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.97  E-value=5.7e-29  Score=217.17  Aligned_cols=252  Identities=18%  Similarity=0.230  Sum_probs=178.7

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc------ccCCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~------~~~~~g   92 (291)
                      |.+++++||.+.|+|++++.+||++.|||+++.+....++  ....+..+  .  ..+.+.....+..      ..++.+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g--~--~~l~l~~~~~~~~~~~~~~~~~g~g   74 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG--Q--VTLVLTEPTSDRHPAAAYLQTHGDG   74 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET--T--EEEEEEEESSTTSHHHHHHHHHSSE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC--C--EEEEEeCCCCCCCHHHHHHHhcCCe
Confidence            5689999999999999999999999999999876543332  23344433  2  3344443211111      124668


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC-------------------C---
Q 022840           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP-------------------T---  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~-------------------~---  150 (291)
                      +.|++|+|+|+++++++|+++|+++..+|.....|...++.|++|+|..++|++...                   .   
T Consensus        75 ~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~  154 (357)
T 2r5v_A           75 VADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDV  154 (357)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTC
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCC
Confidence            999999999999999999999999877665433344345779999999999998521                   0   


Q ss_pred             -CCCceEEEeeeC--CccccHHHHHHhcCCeeeeecc--CcccceeeeeeccccCCceeEEEEeeecCc---ee------
Q 022840          151 -PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTID--SPELKCALAMLGYAEEDQTTVLELAYSYGV---TE------  216 (291)
Q Consensus       151 -~~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~------  216 (291)
                       ..++.|+++.|+  |++++.+||+++|||++.....  .+.......++..+.  ....|+|......   .+      
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHHH
Confidence             124899999999  9999999999999999875431  112223444555332  3466777664321   10      


Q ss_pred             eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccC---C-----CC--------ceEEEEECCCCceEEEec
Q 022840          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP---G-----LN--------TKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       217 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~---~-----~~--------~~~~~~~DP~G~~iel~~  280 (291)
                      ...++|++||+|.|+|+++++++|    +++|+++...|....   .     .+        ..++|++||+|++|||.+
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t  308 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFT  308 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEB
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEc
Confidence            113579999999999999999999    999999888763210   0     00        137999999999999988


Q ss_pred             ch
Q 022840          281 NE  282 (291)
Q Consensus       281 ~~  282 (291)
                      .+
T Consensus       309 ~~  310 (357)
T 2r5v_A          309 AS  310 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.96  E-value=1.5e-27  Score=209.49  Aligned_cols=255  Identities=17%  Similarity=0.222  Sum_probs=178.2

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC--CeeEEEeccCCCCcceEEEEeecCCCCc--------
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS--------   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~~~~--------   86 (291)
                      ..|.+++++||.|.|+|++++.+||+++|||+++.+.....+  ......+..+    ...+++.....+..        
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~   91 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLAD   91 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHH
Confidence            347899999999999999999999999999999876432111  2344555543    23455554311111        


Q ss_pred             --ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCcEEEEEEcC-------C------
Q 022840           87 --YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG-------P------  149 (291)
Q Consensus        87 --~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DP~G~~iel~~~~-------~------  149 (291)
                        ..++.++.|++|+|+|+++++++|+++|+++..+|...  ..|...++.|++|+|+.++|++..       +      
T Consensus        92 ~~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~  171 (381)
T 1t47_A           92 HVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAA  171 (381)
T ss_dssp             HHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECC
T ss_pred             HHHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccc
Confidence              12367899999999999999999999999988776542  222333577899999999999752       0      


Q ss_pred             C---------CCCceEEEeeeC--CccccHHHHHHhcCCeeeeecc-----CcccceeeeeeccccCCceeEEEEeeec-
Q 022840          150 T---------PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTID-----SPELKCALAMLGYAEEDQTTVLELAYSY-  212 (291)
Q Consensus       150 ~---------~~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~-  212 (291)
                      .         ..+++|++++|+  |++++.+||+++|||++....+     .+.......++..+  .....|+|..+. 
T Consensus       172 ~~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~--~g~v~i~l~~~~~  249 (381)
T 1t47_A          172 PIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPAL  249 (381)
T ss_dssp             CSSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECC
T ss_pred             ccccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECC--CCcEEEEEecCCc
Confidence            0         124899999999  9999999999999999876532     12222334444422  234567776643 


Q ss_pred             -Ccee-------eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCC--------CC--------ceEEEE
Q 022840          213 -GVTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG--------LN--------TKITSF  268 (291)
Q Consensus       213 -~~~~-------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--------~~--------~~~~~~  268 (291)
                       ....       ...+.|++||+|.|+|+.+++++|    +++|+++...|...-.        .+        ..+++-
T Consensus       250 ~~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d  325 (381)
T 1t47_A          250 AKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILAD  325 (381)
T ss_dssp             SSSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEE
T ss_pred             CCCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEe
Confidence             1111       124679999999999999999999    9999999887753211        00        124677


Q ss_pred             ECCCCceEEEecc
Q 022840          269 VDPDGWKTVLVDN  281 (291)
Q Consensus       269 ~DP~G~~iel~~~  281 (291)
                      +||+|..+++...
T Consensus       326 ~d~~g~llqift~  338 (381)
T 1t47_A          326 RDEDGYLLQIFTK  338 (381)
T ss_dssp             ECSSCEEEEEEBC
T ss_pred             eCCCCeEEEEecc
Confidence            8888877777653

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.94  E-value=1.3e-25  Score=195.80  Aligned_cols=229  Identities=17%  Similarity=0.278  Sum_probs=168.4

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCC--eeEEEeccCCCCcceEEEEeecCCCCc-------c
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK--YSNAFLGFGPEQSYFVVELTYNYGVTS-------Y   87 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~~~~~~~~~~-------~   87 (291)
                      +++.+++++||+|.|+|++++.+||++.|||+++.....+.+.  ...+.+..+    ...+++..+..+..       .
T Consensus         5 ~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~   80 (393)
T 3isq_A            5 ERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLV   80 (393)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHH
T ss_pred             CCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHH
Confidence            4577999999999999999999999999999998765433221  224445543    23455554322211       1


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEEEcCC-----------C----
Q 022840           88 DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGP-----------T----  150 (291)
Q Consensus        88 ~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~~~~~-----------~----  150 (291)
                      .+|.|++||||+|+|+++++++++++|+++..+|....+  |...++.+++|+|+.+.|++...           .    
T Consensus        81 ~hG~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~  160 (393)
T 3isq_A           81 KHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMD  160 (393)
T ss_dssp             HHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCC
T ss_pred             hcCCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccccccc
Confidence            256789999999999999999999999998888765533  33345668999999999998520           0    


Q ss_pred             ------C----CCceEEEeeeCC--ccccHHHHHHhcCCeeeeecc-----CcccceeeeeeccccCCceeEEEEeeecC
Q 022840          151 ------P----EPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTID-----SPELKCALAMLGYAEEDQTTVLELAYSYG  213 (291)
Q Consensus       151 ------~----~~~~~v~l~v~D--~~~~~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  213 (291)
                            +    .+|+|++++|.|  ++++.+||+++|||++....+     .+....+..++..  ++....|+|.++..
T Consensus       161 ~~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~--~~g~v~i~L~ep~~  238 (393)
T 3isq_A          161 PLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVAN--YEESIKMPINEPAP  238 (393)
T ss_dssp             TTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEEC--TTSSCEEEEEEEEC
T ss_pred             ccccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEEC--CCCCEEEEEecCCC
Confidence                  1    238999999998  999999999999999876543     1112334444442  33467788877543


Q ss_pred             --ce-e------eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCC
Q 022840          214 --VT-E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       214 --~~-~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                        .. +      ...+.|++||||.|+|+.+++++|    +++|++++..|
T Consensus       239 ~~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P  285 (393)
T 3isq_A          239 GKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVP  285 (393)
T ss_dssp             CSBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCC
Confidence              11 1      124789999999999999999999    99999999877

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.94  E-value=2.3e-25  Score=197.25  Aligned_cols=231  Identities=18%  Similarity=0.241  Sum_probs=161.2

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC--CCeeEEEeccCCCCcceEEEEeecCCCC----------
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGVT----------   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~~~----------   85 (291)
                      +|.+++++||.|.|+|++++.+||++.|||+++.....+.  ..+..++++.+  .  ..+.+.....+.          
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g--~--~~l~L~~~~~~~~~~~~~~~~~   95 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--D--LRFLFTAPYSPSLSAGEIKPTT   95 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--T--EEEEEEEECCGGGTTTCCGGGC
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC--C--EEEEEecCCCCccccccccccc
Confidence            3557899999999999999999999999999887644321  23345555533  2  344444331110          


Q ss_pred             ---------c------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           86 ---------S------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        86 ---------~------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                               .      ..++.|+.||||+|+|+++++++|+++|+++..+|....+. .....+++|+|+.++|++....
T Consensus        96 ~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~-~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A           96 TASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             CCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCc-eEEEEEEcCCCcEEEEEecCCC
Confidence                     0      12456899999999999999999999999988777654332 3345677888888887764211


Q ss_pred             -------------------------CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-----cceeeeeeccccC
Q 022840          151 -------------------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEE  200 (291)
Q Consensus       151 -------------------------~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~  200 (291)
                                               ..+++|++++|+|++++.+||+++|||++..+....+     .+....++..+  
T Consensus       175 ~~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~--  252 (424)
T 1sqd_A          175 DTEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN--  252 (424)
T ss_dssp             ------CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT--
T ss_pred             CCCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcC--
Confidence                                     1248999999999999999999999999887654322     12333344432  


Q ss_pred             CceeEEEEeeecC---ce----ee---ccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCC
Q 022840          201 DQTTVLELAYSYG---VT----EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       201 ~~~~~l~l~~~~~---~~----~~---~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      .....|+|.++..   ..    .+   ..+.|++||||.|+|+.+++++|.+++..+|++++..|
T Consensus       253 ~g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          253 DEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             TSCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             CCcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            2356777776531   11    11   24679999999999999999999333333899999875

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=1.1e-24  Score=192.55  Aligned_cols=227  Identities=15%  Similarity=0.176  Sum_probs=160.2

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC--CCeeEEEeccCCCCcceEEEEeecCCCC----------
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGVT----------   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~~~----------   85 (291)
                      ++.+++++||.|.|+|++++.+||++.|||+++.+...+.  .....+++..+  .  ..+++.......          
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G--~--~~l~L~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--S--LSFLFTAPYAHGADAATAALPS  101 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEECCSSCCGGGCSSTT
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC--C--EEEEEecCCCCccccccccccc
Confidence            3567999999999999999999999999999887654322  13455556544  2  334444332110          


Q ss_pred             ---c------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC------
Q 022840           86 ---S------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT------  150 (291)
Q Consensus        86 ---~------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~------  150 (291)
                         .      ..++.|+.||+|+|+|+++++++++++|+++..+|....++ ..+..+++|+|..+.|++....      
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~~~~~~~~f  180 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAAGEPF  180 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGGGSSS
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccCCCCCCccc
Confidence               0      12456899999999999999999999999987766543222 2235567777777777664310      


Q ss_pred             ----------------CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCccc-----ceeeeeeccccCCceeEEEEe
Q 022840          151 ----------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTTVLELA  209 (291)
Q Consensus       151 ----------------~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~  209 (291)
                                      ..+|+|++++|+|++++.+||+++|||++.++....+.     +....++..+  .....|+|.
T Consensus       181 ~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~--~g~i~l~l~  258 (418)
T 1sp8_A          181 LPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN--SENVLLPLN  258 (418)
T ss_dssp             STTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS--SSCCEEEEE
T ss_pred             CCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcC--CCcEEEEEe
Confidence                            12489999999999999999999999998876533221     2233445432  235667776


Q ss_pred             eecC---ce-e------eccCcceeEEEEEecchHHHHHHHHHHHHH----hCCEeecCC
Q 022840          210 YSYG---VT-E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  255 (291)
Q Consensus       210 ~~~~---~~-~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~----~G~~~~~~p  255 (291)
                      .+..   .. .      ...++|++||||.|+|+++++++|    ++    +|+++...|
T Consensus       259 e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          259 EPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             EECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence            6531   11 1      124779999999999999999999    98    799999876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=4.5e-25  Score=192.32  Aligned_cols=250  Identities=15%  Similarity=0.110  Sum_probs=169.0

Q ss_pred             hhccCCCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc----c
Q 022840           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----Y   87 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~----~   87 (291)
                      +++.++ |.+++++||.+.|+|++++.+|| +.|||+++.+....    ....+..+  .  ..+.+........    .
T Consensus         2 ~~~~~~-~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g--~--~~l~l~~~~~~~~~~~~~   71 (357)
T 1cjx_A            2 DLYENP-MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG--E--INLILNNEPNSIASYFAA   71 (357)
T ss_dssp             --CCCT-TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET--T--EEEEEECCSSSHHHHHHH
T ss_pred             ccccCC-cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC--C--EEEEEECCCCchhhhhhh
Confidence            455544 88999999999999999999999 78999998754321    23444433  2  3344443222110    1


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC-----------------
Q 022840           88 DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT-----------------  150 (291)
Q Consensus        88 ~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~-----------------  150 (291)
                      .++.++.+++|+|+|+++++++++++|+++...+..  .|......+++|+|..++|++....                 
T Consensus        72 ~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~  149 (357)
T 1cjx_A           72 EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVER  149 (357)
T ss_dssp             HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCS
T ss_pred             hcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCcccc
Confidence            256789999999999999999999999987665532  2222235678888888888765311                 


Q ss_pred             -C-----CCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCcc--cce--eeeeeccccCCceeEEEEeee-cCcee-
Q 022840          151 -P-----EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKC--ALAMLGYAEEDQTTVLELAYS-YGVTE-  216 (291)
Q Consensus       151 -~-----~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~~~~~-  216 (291)
                       +     .+++|+++.|+  |++++.+||+++|||++.......+  ...  ...+...    ....|+|..+ ..... 
T Consensus       150 ~~~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~~~~  225 (357)
T 1cjx_A          150 NPVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKGAGQ  225 (357)
T ss_dssp             SCCTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTCCSH
T ss_pred             CCCCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCCCCh
Confidence             1     23789999999  9999999999999999876543221  111  2233332    2466777665 22111 


Q ss_pred             ------eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeec-CCcc-------cCCCCc---------eEEEEEC---
Q 022840          217 ------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPGP-------IPGLNT---------KITSFVD---  270 (291)
Q Consensus       217 ------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~-~p~~-------~~~~~~---------~~~~~~D---  270 (291)
                            ...+.|++||+|.|+|+++++++|    +++|+++.. .|..       ..+..+         .+++-+|   
T Consensus       226 ~~~~~~~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~  301 (357)
T 1cjx_A          226 IEEFLMQFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVE  301 (357)
T ss_dssp             HHHHHHHHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEET
T ss_pred             HHHhHHhcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCC
Confidence                  124678999999999999999999    999999987 5511       011111         1366677   


Q ss_pred             -CCCceEEEecc
Q 022840          271 -PDGWKTVLVDN  281 (291)
Q Consensus       271 -P~G~~iel~~~  281 (291)
                       |+|+.++|...
T Consensus       302 ~~~g~llqift~  313 (357)
T 1cjx_A          302 GDKRLLLQIFSE  313 (357)
T ss_dssp             TEEEEEEEEEBC
T ss_pred             CCCCeEEEEecc
Confidence             77888777654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.87  E-value=1.6e-20  Score=140.36  Aligned_cols=128  Identities=54%  Similarity=0.972  Sum_probs=98.5

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      |+++|+.|.|+|++++.+||+++|||++......+++.+..+++..++......+++...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            58999999999999999999999999998765544455566777765432234566654333323334557889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      |+++++++|+++|+++..++...++|...+++|+||+||.|||++..+
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            999999999999999887777777665445789999999999998764

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.86  E-value=3.1e-21  Score=148.25  Aligned_cols=127  Identities=17%  Similarity=0.135  Sum_probs=90.9

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-----ccCCCCc
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-----YDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-----~~~~~g~   93 (291)
                      +..|||.|++|.|+|+++|++||+++|||++..+....+  .+...+..........+..........     ...+.+.
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            456799999999999999999999999999876544433  223333322222233333322221111     1123477


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           94 GHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      .|++|.|+|+++++++|+++|+++..+|...++|.  ++||+|||||.|||+|...
T Consensus       100 ~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~--~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCE--EEEEECSSSCEEEEEEC--
T ss_pred             eEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeE--EEEEECCCCCEEEEEEECC
Confidence            89999999999999999999999988888877763  4789999999999998653

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.84  E-value=4.3e-20  Score=137.56  Aligned_cols=123  Identities=25%  Similarity=0.315  Sum_probs=93.7

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEee-------cCCCC---ccc
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY-------NYGVT---SYD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~-------~~~~~---~~~   88 (291)
                      |++++++||+|.|+|++++++||+++|||++......++.....+++..++    ..+++..       .....   ...
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCC
Confidence            578999999999999999999999999999987665555544456666542    2455554       11111   111


Q ss_pred             -CCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           89 -IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        89 -~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                       .+.+..|++|.|+|+++++++|+++|+++...+....+|.. +++|+||+||.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCE-EEEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceE-EEEEECCCCCEEEEeC
Confidence             44578899999999999999999999998776666565544 4889999999999985

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=1.2e-19  Score=137.49  Aligned_cols=126  Identities=52%  Similarity=0.896  Sum_probs=93.5

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      +|++++++|+.|.|+|++++.+||+++|||++......+++.+...++..++......+++...........+.+..|++
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~   82 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIA   82 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEE
Confidence            46789999999999999999999999999999775543334455677776542123456666543322233455789999


Q ss_pred             EEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |.|+|+++++++|+++|+++..+     +|...++||+||+||.|||++..
T Consensus        83 f~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           83 IGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999999999997654     34444458999999999999753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.84  E-value=2.1e-19  Score=133.89  Aligned_cols=126  Identities=16%  Similarity=0.198  Sum_probs=94.6

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .+|+++++||.|.|+|++++.+||+++|||++.......++ ...+.+..+  .....+.+.............+..|++
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~--~~~~~l~l~~~~~~~~~~~~~~~~~~~   84 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPP--GAQTQVALGLPSWYEDGRKPGGYTGIS   84 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECT--TCSCEEEEECGGGCSSCCCSCEEEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECC--CCceEEEEecCcccccccCCCCeEEEE
Confidence            46889999999999999999999999999999876443222 233444432  223445555433211112234678999


Q ss_pred             EEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|+++..++...++|.. +++|+||+|+.|||++.
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPWGQR-ATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTTSCE-EEEEECTTCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCCCCE-EEEEECCCCCEEEEEeC
Confidence            99999999999999999999888888887764 48899999999999873

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.83  E-value=1.2e-19  Score=135.52  Aligned_cols=128  Identities=47%  Similarity=0.829  Sum_probs=97.7

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+...+++.+.+.++..++...+..+++....+..+...+.++.|++|.|+|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   81 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCC
Confidence            68999999999999999999999999876654333445566666554333567777664443333345688899999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      ++++++++    +++|+++..+|...+.+..+++||+||+|+.|||++..+.
T Consensus        82 ~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           82 AAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             HHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            99999999    9999999988776665334689999999999999997654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.83  E-value=1.8e-19  Score=134.12  Aligned_cols=124  Identities=23%  Similarity=0.327  Sum_probs=91.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcc-------cCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-------DIGT   91 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-------~~~~   91 (291)
                      +|+++|+|++|.|+|++++.+||+++|||++......++.+...+++..++    ..+++.........       ..+.
T Consensus         1 sm~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3rmu_A            1 SMLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN----TKMELLHPLGLDSPIAGFLQKNKAG   76 (134)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS----SEEEEEEECSTTCTTHHHHHHCTTC
T ss_pred             CccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC----EEEEEEecCCCCchhhhhhhccCCC
Confidence            378999999999999999999999999999876554444455677777643    23444433221111       2345


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeecCCcc-CCCCceEEEEE--ECCCCcEEEEEEc
Q 022840           92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGP-LKGMTTHFAFV--KDPDGYIFELIQR  147 (291)
Q Consensus        92 g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~--~DP~G~~iel~~~  147 (291)
                      +..|++|.|+|+++++++|+++|+++..++.. ..+|.. +.++  +||+||.|||++.
T Consensus        77 g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           77 GMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP-VIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSE-EEEECSCSSCCSCEEEEEC
T ss_pred             CceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCce-EEEEecCCCCcEEEEEEcC
Confidence            78999999999999999999999997665333 334443 3555  8999999999873

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.82  E-value=1.9e-19  Score=148.68  Aligned_cols=146  Identities=16%  Similarity=0.212  Sum_probs=110.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..+++|+||+|.|+|++++++||+++|||++..+..      ..+++..++    ..+.+.....     .+.+..|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCCCeeEEEE
Confidence            357899999999999999999999999999876432      145666542    3344444321     1336889999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeecC-Ccc----CCCCceEEEEEECCCCcEEEEEEcCCC------------CCCceEEEe
Q 022840           99 ATE--DVYKMVENIRAKGGNVTRE-PGP----LKGMTTHFAFVKDPDGYIFELIQRGPT------------PEPLCQVML  159 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~-~~~----~~~g~~~~~~~~DP~G~~iel~~~~~~------------~~~~~~v~l  159 (291)
                      .|+  ++++++++|+++ +++..+ +..    ..++.. .+||+|||||.+||++....            +.++.||.|
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~-~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L  164 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAY-SCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINI  164 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEE-EEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEE
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeE-EEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEE
Confidence            995  599999999999 887542 221    234444 58999999999999987642            235899999


Q ss_pred             eeCCccccHHHHHHhcCCeeeee
Q 022840          160 RVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       160 ~v~D~~~~~~Fy~~~lG~~~~~~  182 (291)
                      .|+|++++.+|| ++|||+...+
T Consensus       165 ~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          165 TTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             ECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EeCCHHHHHHHH-HHcCCCcccC
Confidence            999999999999 9999998765

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.82  E-value=2.2e-19  Score=132.70  Aligned_cols=120  Identities=22%  Similarity=0.324  Sum_probs=93.0

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC--CcccCCCCceEEEEE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSYDIGTGFGHLAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~~~~~~g~~~i~~~   99 (291)
                      |+++||+|.|+|++++++||+++|||++......++.++..+++..++   ...+++......  .+...+.|..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            689999999999999999999999999876544434455677777643   244555544322  222245678999999


Q ss_pred             ECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          100 TED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      |+|   +++++++|+++|+++..+|...++|.. .++|+||+||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYY-ESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCCcE-EEEEECCCCCEEEEe
Confidence            999   889999999999998887777666654 478999999999996

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.82  E-value=1.5e-19  Score=133.30  Aligned_cols=123  Identities=23%  Similarity=0.314  Sum_probs=90.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC--C-cccCCCCceE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--T-SYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~-~~~~~~g~~~   95 (291)
                      ||+++++|+.|.|+|++++.+||+++|||++......++......++..++.    .+++......  . ....+.+..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceE
Confidence            6889999999999999999999999999998765333222223344554432    4555542211  1 1123457889


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      ++|.|+|+++++++|+++|+++...+....+|.. ++||+||+||.|||++
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKK-MTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCE-EEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCcE-EEEEECCCCCEEEeeC
Confidence            9999999999999999999998766554555544 4789999999999975

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.82  E-value=1.8e-19  Score=134.39  Aligned_cols=123  Identities=21%  Similarity=0.216  Sum_probs=91.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEe-ecCCCCeeEEEeccCCCCcceEEEEeecCCCCcc-----cCCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKR-DVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-----DIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-----~~~~g   92 (291)
                      .|+++++||+|.|+|++++++||+ +|||++.... ..+..+....++..+    ...+++.........     ..+.|
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCc
Confidence            478999999999999999999999 9999986542 223344566677653    234666553322111     11567


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeecCCcc--CCCCceEEEEEECCCCcEEEEEEc
Q 022840           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGP--LKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +.|++|.|+|+++++++|+++|+++..+|..  ..+|.. ++|++|||||.|||+|.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~-~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRK-VAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEE-EEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCce-EEEEECCCceEEEEecC
Confidence            8899999999999999999999998765432  234443 58999999999999974

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.81  E-value=1.1e-19  Score=139.44  Aligned_cols=126  Identities=17%  Similarity=0.140  Sum_probs=91.3

Q ss_pred             CCCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-----eccCcce
Q 022840          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-----YTKGNAY  223 (291)
Q Consensus       149 ~~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~g~  223 (291)
                      ....+|.|+.|.|+|++++++||+++|||++..+.+..+.  +...+..........+.+.....+..     ...+.|.
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            3457899999999999999999999999998765443332  33333322322233333322221111     1123577


Q ss_pred             eEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      .|++|.|+|+++++++|    +++|+++..+|...++  ++.+||+|||||.|||+|..
T Consensus       100 ~~l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             CSEEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             eEEEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            89999999999999999    9999999999887766  68999999999999999964

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.81  E-value=5e-19  Score=136.71  Aligned_cols=127  Identities=20%  Similarity=0.404  Sum_probs=96.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-c-----cCCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-Y-----DIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~-----~~~~g   92 (291)
                      +++++|+||+|.|+|++++++||+++|||++......++.+....++..++    ..+++........ .     ..+.|
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCC
Confidence            357899999999999999999999999999987655445556677777542    3455555432211 1     23568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeecC-CccCCCCceEEEEE--ECCCCcEEEEEEcCCC
Q 022840           93 FGHLAIATEDVYKMVENIRAKGGNVTRE-PGPLKGMTTHFAFV--KDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~DP~G~~iel~~~~~~  150 (291)
                      +.|++|.|+|+++++++|+++|+++..+ +....+|.. ++|+  +||+|+.|||++..+.
T Consensus        80 ~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~-~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCE-EEEBCGGGTTTCCEEEEECCCC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcE-EEEEeccCCCeEEEEEEecCCc
Confidence            8999999999999999999999998766 554444544 3566  4999999999998754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.80  E-value=1.4e-18  Score=137.21  Aligned_cols=149  Identities=32%  Similarity=0.553  Sum_probs=102.2

Q ss_pred             CCcCCCCCCchhhccC--------CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCC--
Q 022840            1 MAEASPAAANAELLEW--------PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE--   70 (291)
Q Consensus         1 ~~~~~~~~~~~~~~~~--------~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~--   70 (291)
                      ||++.++++.......        +.+.+++++|+.|.|+|++++++||+++|||++......+...+..+++..++.  
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~   80 (184)
T 2za0_A            1 MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKND   80 (184)
T ss_dssp             ---CCCCCCCCCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGG
T ss_pred             CCCCCcccCCcchhhhhcccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEeccccccc
Confidence            7788777765443222        233578999999999999999999999999998765443333455556654320  


Q ss_pred             -------------CcceEEEEeecCCC----C-ccc----CCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCc
Q 022840           71 -------------QSYFVVELTYNYGV----T-SYD----IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT  128 (291)
Q Consensus        71 -------------~~~~~l~~~~~~~~----~-~~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~  128 (291)
                                   .....+++......    . .+.    ...+..|++|.|+|+++++++|+++|+++..++...+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~  160 (184)
T 2za0_A           81 IPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG  160 (184)
T ss_dssp             SCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT
T ss_pred             CCcccchheeeecCCCceEEEEecCCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCcee
Confidence                         01245555543211    0 111    1247789999999999999999999999887776554443


Q ss_pred             eEEEEEECCCCcEEEEEEcCCCC
Q 022840          129 THFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       129 ~~~~~~~DP~G~~iel~~~~~~~  151 (291)
                        ++||+||+||.|||++....|
T Consensus       161 --~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          161 --LAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             --CEEEECTTCCEEEEECTTTGG
T ss_pred             --EEEEECCCCCEEEEEecCccc
Confidence              478999999999999876543

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.80  E-value=1.4e-18  Score=130.23  Aligned_cols=124  Identities=19%  Similarity=0.256  Sum_probs=91.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC--Ccc-cCCCCceE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSY-DIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~~-~~~~g~~~   95 (291)
                      ||+++|+||.|.|+|++++++||+++|||++.......++.+..+++. +    ...+++......  ... ..+.+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcce
Confidence            678999999999999999999999999999876554332234445554 2    234555543321  111 23457789


Q ss_pred             EEEEE---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           96 LAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        96 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      ++|.|   +|+++++++|+++|+++.. +...++|  ..+||+||+||.|||++..+.
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g--~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFG--WILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTE--EEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCc--eEEEEECCCCCEEEEEEcCCC
Confidence            99999   8899999999999999763 4444555  357899999999999987653

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.80  E-value=3.5e-18  Score=130.38  Aligned_cols=126  Identities=17%  Similarity=0.238  Sum_probs=92.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeec-----------CCCCeeEEEeccCCCCcceEEEEeec--CCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV-----------PEEKYSNAFLGFGPEQSYFVVELTYN--YGVT   85 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~l~~~~~--~~~~   85 (291)
                      +++++++|+.|.|+|++++.+||++ |||++......           ++.....+++..+++.  ..+++...  ....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~--~~l~l~~~~~~~~~   83 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH--SRIELSRFLTPPTI   83 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSS--CEEEEEEEEESCCC
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCC--cEEEEEEecCCCCc
Confidence            5689999999999999999999999 99998765332           1123456667654322  23444331  1111


Q ss_pred             -----cccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           86 -----SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        86 -----~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                           ....+.|+.|++|.|+|+++++++|+++|+++..++...++|.. ++||+||+|+.|||++..
T Consensus        84 ~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           84 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceE-EEEEECCCCCEEEEEecc
Confidence                 11234467899999999999999999999998877766566544 478999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.80  E-value=2.8e-18  Score=135.71  Aligned_cols=127  Identities=33%  Similarity=0.594  Sum_probs=98.0

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCc---------------ceEEEEeecCCC
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS---------------YFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~l~~~~~~~~   84 (291)
                      ...+|+||+|.|+|++++++||+++|||++........+.+..+++..+....               ...+++......
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            46899999999999999999999999999988766666677788887644211               234666432211


Q ss_pred             -----CcccC----CCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           85 -----TSYDI----GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 -----~~~~~----~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                           ..+..    ..++.|++|.|+|+++++++|+++|+++..++....++.  ++||+||+||.|||++..
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGG
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEcc
Confidence                 11112    237889999999999999999999999888776655544  478999999999999864

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.79  E-value=2.2e-18  Score=130.79  Aligned_cols=129  Identities=23%  Similarity=0.334  Sum_probs=95.0

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCC--CcceEEEEeecCCCCc------ccCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE--QSYFVVELTYNYGVTS------YDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~------~~~~   90 (291)
                      .|+++++||.|.|+|++++++||+++|||++......++.+...+++..++.  .....+++........      ...+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            5789999999999999999999999999999776544444455677776532  1124566655332211      1233


Q ss_pred             --CCceEEEEEECCHHHHHHHHHHcCCeee-cCCccCCCCceEEEEE--ECCCCcEEEEEEcC
Q 022840           91 --TGFGHLAIATEDVYKMVENIRAKGGNVT-REPGPLKGMTTHFAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        91 --~g~~~i~~~v~d~~~~~~~l~~~G~~~~-~~~~~~~~g~~~~~~~--~DP~G~~iel~~~~  148 (291)
                        .+..|++|.|+|+++++++|+++|+++. ..|....+|.. +.|+  +||+|+.|||++.+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~-~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-INFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCE-EEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceE-EEEEeecCCCcEEEEEEecC
Confidence              5788999999999999999999999977 44554455544 3556  99999999999865

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=3.9e-18  Score=130.27  Aligned_cols=124  Identities=23%  Similarity=0.325  Sum_probs=88.3

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC---CcccCCCCc
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGF   93 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~---~~~~~~~g~   93 (291)
                      ..|++.+|+||.|.|+|++++++||+++|||++....   + .  ..++..++    ..+.+......   .......+.
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~   86 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-N--RKALIFGA----QKINLHQQEMEFEPKASRPTPGS   86 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-T--EEEEEETT----EEEEEEETTBCCSSCCSSCCTTC
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-C--eEEEEeCC----eEEEEeccCCcCCCcCcCCCCCc
Confidence            3467899999999999999999999999999987652   1 1  45555542    23444432211   122244578


Q ss_pred             eEEEEEEC-CHHHHHHHHHHcCCeeecCCccCCCCc--eEEEEEECCCCcEEEEEEcCCC
Q 022840           94 GHLAIATE-DVYKMVENIRAKGGNVTREPGPLKGMT--THFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        94 ~~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      .|++|.+. |+++++++|+++|+++..+|...+++.  ...+||+|||||.|||.+..+.
T Consensus        87 ~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           87 ADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             CEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             cEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            89999997 999999999999999877665444322  2457899999999999987643

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.78  E-value=9.6e-19  Score=134.76  Aligned_cols=127  Identities=22%  Similarity=0.323  Sum_probs=94.4

Q ss_pred             ccCCCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC--------------CCCeeEEEeccCCCCcceEEEEe
Q 022840           14 LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGFGPEQSYFVVELT   79 (291)
Q Consensus        14 ~~~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~l~~~   79 (291)
                      +..+.+++++|+||+|.|+|++++++||+++|||++......+              +......++..+    ...+++.
T Consensus        10 ~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~   85 (159)
T 3gm5_A           10 MSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELI   85 (159)
T ss_dssp             CCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEE
T ss_pred             ccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEE
Confidence            3445678999999999999999999999999999876543322              134556667654    2456666


Q ss_pred             ecCCCCc-c-----cCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCC--CcEEEEEEc
Q 022840           80 YNYGVTS-Y-----DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD--GYIFELIQR  147 (291)
Q Consensus        80 ~~~~~~~-~-----~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~--G~~iel~~~  147 (291)
                      ....... .     ..+.|+.||||.|+|+++++++|+++|+++...+. . +| ..++||.|||  |+.|||++.
T Consensus        86 ~~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~-~g-~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           86 EPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F-EG-GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             EECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E-TT-EEEEEESCHHHHSSEEEEEEE
T ss_pred             EECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c-CC-eeEEEEeccccCcEEEEEEec
Confidence            5432221 1     13668999999999999999999999999765542 2 23 3468999999  999999985

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.78  E-value=4.6e-18  Score=126.48  Aligned_cols=122  Identities=19%  Similarity=0.312  Sum_probs=90.3

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC---CCcccCCCCce
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGTGFG   94 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~~~~g~~   94 (291)
                      .|++.+++|+.|.|+|++++++||+++|||++....   . .  ..++..+.    ..+.+.....   ........+..
T Consensus         5 ~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   74 (133)
T 3ey7_A            5 LMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-G--RIALEFGH----QKINLHQLGNEFEPKAQNVRVGSA   74 (133)
T ss_dssp             CCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-T--EEEEEETT----EEEEEEETTSCCSSCCTTCCTTCC
T ss_pred             EeEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-C--eEEEEcCC----EEEEEEcCCCCccccCCCCCCCcc
Confidence            367899999999999999999999999999987652   1 1  44555442    2344443221   11122455789


Q ss_pred             EEEEEECC-HHHHHHHHHHcCCeeecCCccCCCC--ceEEEEEECCCCcEEEEEEcCC
Q 022840           95 HLAIATED-VYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      |++|.|+| +++++++|+++|+++..+|...+++  ...+++|+||+||.|||++..+
T Consensus        75 ~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           75 DLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99999997 9999999999999987766544432  2245889999999999998753

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.78  E-value=2.3e-18  Score=136.25  Aligned_cols=129  Identities=29%  Similarity=0.536  Sum_probs=100.1

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCc---------------eeEEEEeeecCce
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ---------------TTVLELAYSYGVT  215 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+.....+.+.+.+++.++...               ...++|....+..
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  111 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  111 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGG
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCC
Confidence            3579999999999999999999999999987765555567777777554311               3567776544321


Q ss_pred             -----eecc----CcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          216 -----EYTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 -----~~~~----~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                           ++..    ..|++|++|.|+|+++++++|    +++|+++...|...++  ++++||+||+|+.|||++.....
T Consensus       112 ~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  184 (187)
T 3vw9_A          112 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  184 (187)
T ss_dssp             GCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSG
T ss_pred             CCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccccc
Confidence                 1111    238899999999999999999    9999999988865444  45789999999999999976654

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.77  E-value=3.4e-18  Score=130.78  Aligned_cols=126  Identities=17%  Similarity=0.169  Sum_probs=93.2

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeec--------CCCCeeEEEeccCCCCcceEEEEeecCCCC---
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV--------PEEKYSNAFLGFGPEQSYFVVELTYNYGVT---   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~---   85 (291)
                      +.+++++|+||+|.|+|++++++||+++|||++......        ..+  ...++..++   ...+++.......   
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~l~l~~~~~~~~~~   87 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPD---GTILDLFGEPELSPPD   87 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTT---SCEEEEEECTTCCCSS
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCC---CCEEEEEecCCCCcCC
Confidence            446789999999999999999999999999998752211        112  245565543   2345555433211   


Q ss_pred             --cccCCCCceEEEEEEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           86 --SYDIGTGFGHLAIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 --~~~~~~g~~~i~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                        ......+..|++|.|+  |+++++++|+++|+++..++....+|.  .+||+||+||.|||++.+.
T Consensus        88 ~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           88 PNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGR--GVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             SSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCE--EEEEECTTSCEEEEEECCC
T ss_pred             CCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCcc--EEEEECCCCCEEEEEecCC
Confidence              1123457899999998  999999999999999877777666654  5889999999999998764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=1e-17  Score=126.46  Aligned_cols=116  Identities=19%  Similarity=0.267  Sum_probs=85.0

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .|++.+|+||.|.|+|++++++||+++|||++.....  +..  ..++..+.  ....+.+....      ...+..|++
T Consensus        23 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~--~~~~l~l~~~~------~~~~~~h~~   90 (141)
T 3ghj_A           23 PMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSG--RAGMVVLQEEK------ENWQQQHFS   90 (141)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETT--TTEEEEEEECC------SSCCCCEEE
T ss_pred             ceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecC--CCcEEEEeccC------CCCCCceEE
Confidence            3578999999999999999999999999999876542  222  44555443  23456665542      123678999


Q ss_pred             EEEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           98 IATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |.|+  |+++++++|+++|+++.. +....++....+||+|||||.|||+.
T Consensus        91 ~~v~~~dld~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           91 FRVEKSEIEPLKKALESKGVSVHG-PVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEECGGGHHHHHHHHHHTTCCCEE-EEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEeHHHHHHHHHHHHHCCCeEeC-CcccCCCCceEEEEECCCCCEEEEEE
Confidence            9997  999999999999999873 33333333345889999999999985

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.77  E-value=4.6e-18  Score=125.51  Aligned_cols=120  Identities=20%  Similarity=0.232  Sum_probs=92.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee--eccCcceeEEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~  229 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+...+...+...++..++   +..++|.......+  ...+.|+.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            478999999999999999999999999876644334445666666543   46777766543322  2245678999999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      |+|   ++++++++    +++|+++..+|...+. +.+.+||+||+|+.|||+
T Consensus        79 v~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKL----RQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHH----HHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   77888888    9999999988776544 457899999999999996

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.76  E-value=4.2e-18  Score=126.65  Aligned_cols=121  Identities=18%  Similarity=0.266  Sum_probs=90.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-e------ccCccee
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-Y------TKGNAYA  224 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~------~~~~g~~  224 (291)
                      .++.|+.+.|+|++++.+||+++|||++..+...++......++..+    +..+++....+... .      ....|+.
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            46899999999999999999999999987654433334556666654    34566655433211 1      2346889


Q ss_pred             EEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEE--ECCCCceEEEec
Q 022840          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVD  280 (291)
Q Consensus       225 hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~DP~G~~iel~~  280 (291)
                      |++|.|+|+++++++|    +++|+++..++......+.+..++  +||+|+.|||+|
T Consensus        80 hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           80 HICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            9999999999999999    999999887755444434556666  899999999997

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.76  E-value=1.1e-17  Score=126.60  Aligned_cols=124  Identities=41%  Similarity=0.667  Sum_probs=93.0

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+...+++.+...++..++...+..++|.........+.+.+++|++|.|+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~   86 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   86 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeC
Confidence            57899999999999999999999999987654333344555666654322246777776544322334568899999999


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      |+++++++|    +++|+++..+     .+...++||+||+|+.|||++..+.
T Consensus        87 d~~~~~~~l----~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~~~  130 (144)
T 2c21_A           87 DVKELVADM----RKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEKTM  130 (144)
T ss_dssp             CHHHHHHHH----HHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHHHH
T ss_pred             CHHHHHHHH----HHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcCch
Confidence            999999999    9999998764     2122345999999999999986543

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.76  E-value=1.4e-17  Score=125.18  Aligned_cols=118  Identities=19%  Similarity=0.307  Sum_probs=84.6

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCee---EEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS---NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++......  ..+.   ..++..+  .  ..+.+......    +..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g--~--~~l~l~~~~~~----~~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG--D--IWVAIMQGEKL----AERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET--T--EEEEEEECCCC----SSCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC--C--EEEEEEeCCCC----CCCCeeEE
Confidence            688999999999999999999999999998764321  1111   0144433  1  24555543211    13478899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|.|+  |+++++++|+++|+++..++...+++.. .+||+||+||.|||++.+
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeE-EEEEECCCCCEEEEEeCC
Confidence            99999  9999999999999998766555544444 488999999999999754

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.76  E-value=2.8e-17  Score=131.20  Aligned_cols=209  Identities=12%  Similarity=0.053  Sum_probs=132.8

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE---EEE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL---AIA   99 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i---~~~   99 (291)
                      -..+++|.|+|++++.+||+++|||++..+...      .+.++.+.....+.|+..+....   ....|..|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~~------~a~lg~~~~~~~L~lEEsp~~~~---~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEESA------FLSLGDQTGLEKLVLEEAPSMRT---RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCEEEEEEECCTTTC---BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccCc------EEEeecCCCcceEEEEeCCCccc---ccccccceeeeEEEE
Confidence            356799999999999999999999999876543      67777543333333443322222   233466666   699


Q ss_pred             ECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC----------------------CCCceEE
Q 022840          100 TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT----------------------PEPLCQV  157 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~----------------------~~~~~~v  157 (291)
                      |++.+++-.-|.. +..+.. ......|.  .+|+.||+||.|||+...+.                      ...+ |+
T Consensus        81 vp~~~el~~lL~~-~~~~~~-~~~gdhgy--A~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I  155 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHR-LYKGQNGY--AFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SM  155 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSE-EEECSSSE--EEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EE
T ss_pred             cCCHHHHHHHHhc-cccccc-ccccCCcE--EEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EE
Confidence            9998776555444 554321 01112332  47899999999999976421                      1237 99


Q ss_pred             EeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHH
Q 022840          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  237 (291)
                      .|+|+|..++  ||.+ +|+.           ..+.|....+.+..           .+....-|+..+.|.|+  +..+
T Consensus       156 ~LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~a~G~dl~-----------~~~~~t~gLe~l~~~v~--~~dl  208 (244)
T 3e0r_A          156 ELHLPTDIES--FLES-SEIG-----------ASLDFIPAQGQDLT-----------VDNTVTWDLSMLKFLVN--ELDI  208 (244)
T ss_dssp             EEEECTTCCC--SCCH-HHHT-----------TTEEEEECCCTTTT-----------CCTTSBSSEEEEEEEES--SCCH
T ss_pred             EEEcCchHHH--Hhhc-cCCc-----------ccEEEEcccCCCCC-----------CCCCCccCceEEEEEeC--HHHH
Confidence            9999999999  9976 4441           23455553221110           01112348888888883  4444


Q ss_pred             HHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          238 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +.+..+|++.|..+..        ...++.+.||+|+.|+|++
T Consensus       209 ~~l~~~L~~~g~~idk--------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          209 ASLRQKFESTEYFIPK--------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHHHHTTTSCEECCT--------TCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHhCCceEcc--------cCCEEEEECCCCCEEEEEE
Confidence            4444444888764322        2468999999999999975

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.76  E-value=1.5e-17  Score=121.43  Aligned_cols=115  Identities=16%  Similarity=0.128  Sum_probs=83.6

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +|++.|+.|.|+|++++.+||+++|||++....  +  .  ..++..++  ..  +.+...........+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~--~~~~~~~~--~~--l~l~~~~~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAN--D--G--FAQFTIGS--HC--LMLSQNHLVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEE--T--T--EEEEEETT--EE--EEEESSCSSSCCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeC--C--C--EEEEEeCC--eE--EEEEcCCCCCcccCCCe-EEEEEEE
Confidence            478999999999999999999999999986432  1  1  34455432  22  22322111111122334 4899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +|+++++++|+++|+++..+|...++|... ++|+||+||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccEE-EEEECCCccEEEEEec
Confidence            999999999999999987777777776554 7899999999999874

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.76  E-value=1e-17  Score=124.48  Aligned_cols=120  Identities=23%  Similarity=0.292  Sum_probs=90.2

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEee-------ecCcee---ec-cC
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAY-------SYGVTE---YT-KG  220 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-------~~~~~~---~~-~~  220 (291)
                      .++.|+.+.|+|++++.+||+++|||++..+...++......++..+    ...+++..       ......   .+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            46899999999999999999999999988665433332334455543    34666666       222111   12 45


Q ss_pred             cceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 ~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      .|+.|++|.|+|++++.+++    +++|+++...|...++ +.+.+||+||+|+.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            68899999999999999999    9999998876655343 4688999999999999986

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.76  E-value=2.6e-17  Score=121.52  Aligned_cols=118  Identities=16%  Similarity=0.200  Sum_probs=86.6

Q ss_pred             CCceeEEEEEEEe--CCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           19 KDKRRFLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v--~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ||+.+++||.|.|  +|++++.+||+++|||++........ .....++..++    ..+.+......    ...+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELK-KRGGCWFKCGN----QEIHIGVEQNF----NPAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGG-GGCCEEEEETT----EEEEEEECTTC----CCCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCccccc-CCCceEEEeCC----EEEEEEecCCC----CCCCceEE
Confidence            6789999999999  89999999999999999875432110 01134555542    23444443211    12367899


Q ss_pred             EEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|.|+|+++++++|+++|+++..++.  .+|.. .++|+||+||.|||++..
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~--~~g~~-~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHA--RPDVI-RFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECS--STTEE-EEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCC--CCCee-EEEEECCCCCEEEEEeCC
Confidence            99999999999999999999876662  23433 478999999999999853

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.76  E-value=4.2e-18  Score=126.97  Aligned_cols=121  Identities=16%  Similarity=0.167  Sum_probs=90.1

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeec-cCcccceeeeeeccccCCceeEEEEeeecCcee-ec----cCcceeE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI-DSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YT----KGNAYAQ  225 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~----~~~g~~h  225 (291)
                      .++.|+++.|+|++++.+||+ +|||++..+. ..+..+....++..+    +..++|....+... ..    .+.|++|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            579999999999999999999 9999986542 112223455566543    46677776443211 10    1578899


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCEeecCCccc-CCCCceEEEEECCCCceEEEecc
Q 022840          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       226 i~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~-~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      ++|.|+|+++++++|    +++|+++...|... ...+.+++|++||+|+.|||+|+
T Consensus        81 iaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHH----HHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999    99999998765332 12245889999999999999984

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.75  E-value=2.7e-17  Score=122.52  Aligned_cols=119  Identities=20%  Similarity=0.274  Sum_probs=86.4

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCee---EEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS---NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      |+++++|+.|.|+|++++.+||+++|||++.....  ...+.   ..++..+    ...+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEE
Confidence            68899999999999999999999999999875422  11110   1144433    234555543211    24578899


Q ss_pred             EEEE--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           97 AIAT--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +|.|  +|+++++++|+++|+++..++...+++.. .++|+||+||.|||++...
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGR-SIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCC-EEEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCee-EEEEECCCCCEEEEEcCCh
Confidence            9999  49999999999999998877665544444 4889999999999998653

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.75  E-value=2.1e-17  Score=122.91  Aligned_cols=122  Identities=20%  Similarity=0.279  Sum_probs=91.4

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+....++ .....+..++  ....+.+.............+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEe
Confidence            45799999999999999999999999998876432221 2333343222  24556665533211112235778999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +|++++++++    +++|+++..+|...++ +.+.+||+||+|+.|||+|
T Consensus        88 ~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           88 RDIDEAYKTL----TERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             SCHHHHHHHH----HHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEE
T ss_pred             CCHHHHHHHH----HHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEe
Confidence            9999999999    9999999988887776 3489999999999999987

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.74  E-value=2.1e-17  Score=125.99  Aligned_cols=120  Identities=22%  Similarity=0.311  Sum_probs=89.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC-----CcccCCCCc
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-----TSYDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-----~~~~~~~g~   93 (291)
                      ||+++++|+.|.|+|++++++||+++|||++....    +  ...++..+  .  ..+.+......     .+...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMN--G--FVLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECS--S--SEEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcC--C--EEEEEEeccccccccCCCCCCCCCe
Confidence            67889999999999999999999999999986542    1  14555543  2  23455442210     011124567


Q ss_pred             eEEEEEE---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           94 GHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      .|++|.|   +|+++++++|+++|+++..++...++|.. .++|+||+||.|||++.+.
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSE-EEEEECTTCCEEEEEECTT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCE-EEEEECCCCCEEEEEeCCC
Confidence            8999999   89999999999999998877777666654 4889999999999998753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.74  E-value=5.1e-17  Score=122.13  Aligned_cols=127  Identities=14%  Similarity=0.254  Sum_probs=89.8

Q ss_pred             CCCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceE
Q 022840           16 WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      +++ |...+.||+|.|+|++++++||+++|||++...... .+.+..+++..+..  ...+++...........+.+..|
T Consensus         5 ~~~-m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~h   80 (139)
T 1twu_A            5 FSS-FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSL   80 (139)
T ss_dssp             CSS-CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCE
T ss_pred             CCC-CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccE
Confidence            555 556778999999999999999999999998765432 23345667765432  33455554333222334557789


Q ss_pred             EEEEECCH---HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           96 LAIATEDV---YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~---~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++|.|+|+   ++++++|+++|+++...........+  .||+|||||.|||++..
T Consensus        81 i~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           81 LVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             EEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            99999999   99999999999998732221111122  26999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.74  E-value=5.1e-17  Score=121.02  Aligned_cols=117  Identities=15%  Similarity=0.062  Sum_probs=87.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      .++++++||.|.|+|++++++||+++|||++.....    .  ...+..++   ...+.+....... .....+..|++|
T Consensus         9 ~~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~   78 (132)
T 3sk2_A            9 GPTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----R--YVAFPSSG---DALFAIWSGGEEP-VAEIPRFSEIGI   78 (132)
T ss_dssp             CCCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----S--EEEEECST---TCEEEEESSSCCC-CTTSCCCEEEEE
T ss_pred             CCcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----C--EEEEEcCC---CcEEEEEeCCCCC-cCCCCCcceEEE
Confidence            346799999999999999999999999999865422    1  33343222   2345454433111 123346789999


Q ss_pred             EECC---HHHHHHHHHH---cCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           99 ATED---VYKMVENIRA---KGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~---~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      .|+|   +++++++|++   +|+++..+|...++| + .++|+|||||.|||.+.
T Consensus        79 ~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g-~-~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           79 MLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG-R-TFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             EESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE-E-EEEEECTTCCEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce-E-EEEEECCCCCEEEEEeC
Confidence            9986   9999999999   999988887777776 4 48899999999999874

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.74  E-value=4e-17  Score=121.01  Aligned_cols=120  Identities=15%  Similarity=0.129  Sum_probs=82.0

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |...|+||.|.|+|++++++||++ |||++..... ..+.  ..++...+ .  ..+.+......  .....+..+++|.
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~--~~~~~~~~-~--~~l~l~~~~~~--~~~~~~~~~l~f~   73 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS--EVHRAVHN-G--VEFSLYSIQNP--QRSQIPSLQLGFQ   73 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEET-T--EEEEEEECCCC--SSCCCCSEEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC--EEEEEeCC-C--eEEEEEECCCC--cCCCCCceEEEEE
Confidence            567899999999999999999999 9999865411 1112  33333111 2  23444332211  1222345689999


Q ss_pred             ECCHHHHHHHHHHcCCe-eecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840          100 TEDVYKMVENIRAKGGN-VTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~-~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      |+|+++++++|+++|++ +..+|...++|..  ++|+|||||.|+|.+.++.
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~--~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE--EEEECTTCCEEEEEC----
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE--EEEECCCCCEEEEEEeccc
Confidence            99999999999999999 8777777777654  7899999999999987643

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.74  E-value=2.2e-17  Score=120.60  Aligned_cols=115  Identities=17%  Similarity=0.185  Sum_probs=85.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.+.++ |+.|.|+|++++.+||+++|||++...    .+  ...++..+. .....+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMD----HG--WIVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEE----CS--SEEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEec----CC--EEEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEE
Confidence            567888 999999999999999999999998653    11  133344321 1123444443211     1235679999


Q ss_pred             EECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           99 ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      .|+|+++++++|+++|+++..++...++|.. +++|+||+||.|||++.
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCCccE-EEEEECCCCCEEEEEec
Confidence            9999999999999999998777777666644 48899999999999875

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.74  E-value=1.6e-16  Score=118.71  Aligned_cols=113  Identities=21%  Similarity=0.307  Sum_probs=85.4

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |+++++||.|.|+|++++.+||+++|||++.....  .    ..++..+.    ..+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEE
Confidence            68999999999999999999999999999876431  1    34555432    23445443211  1233467899999


Q ss_pred             EC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |+  |+++++++|+++|+++..++..  ++ . .++|+||+||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~~-~-~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--EG-D-SFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--SS-C-EEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--Ce-E-EEEEECCCCCEEEEEECC
Confidence            97  9999999999999998776543  33 3 478999999999999764

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.73  E-value=1.2e-17  Score=129.01  Aligned_cols=125  Identities=18%  Similarity=0.286  Sum_probs=94.8

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee------eccCccee
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYA  224 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~  224 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+...++......++..+    +..++|........      ...+.|+.
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            457999999999999999999999999988765444444566666643    45677766443221      12357899


Q ss_pred             EEEEEecchHHHHHHHHHHHHHhCCEeecC-CcccCCCCceEEEE--ECCCCceEEEecchhh
Q 022840          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVDNEDF  284 (291)
Q Consensus       225 hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~DP~G~~iel~~~~~~  284 (291)
                      |++|.|+|+++++++|    +++|+++..+ |...++ +.+++|+  +||+|+.|||+++.+.
T Consensus        82 Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEV----KENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEEEEECCHHHHHHHH----HHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999    9999999877 443332 3466777  4999999999997653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.73  E-value=3.9e-17  Score=124.24  Aligned_cols=120  Identities=11%  Similarity=0.041  Sum_probs=84.6

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-ccCCCCceEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~g~~~i~~   98 (291)
                      |+++++||.|.|+|++++++||+++|||++.....    .  ..++..++   ...+.+........ .....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTT---SCEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCC---CcEEEEecCCcCCccccCCCCeEEEEE
Confidence            57899999999999999999999999999875421    1  44555422   23455543322111 122345689999


Q ss_pred             EECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      .|+|   +++++++|+++|+++..++...++| . .++|+||+||.|||++..+.
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G-~-~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG-Y-TFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE-E-EEEEECTTCCEEEEEEEC--
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC-c-EEEEECCCCCEEEEEEcChh
Confidence            9987   9999999999999988888777776 3 48899999999999987643

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.73  E-value=3.6e-17  Score=123.81  Aligned_cols=120  Identities=14%  Similarity=0.207  Sum_probs=86.4

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |+++++. +.|.|+|++++++||+++|||++..+...+........++  .      +.+...... . ....+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--~------~~l~~~~~~-~-~~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS--T------ILLIAGSEE-A-LKPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET--T------EEEEESCHH-H-HGGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec--c------EEEecCCcc-c-CCCCcceEEEE
Confidence            3467777 9999999999999999999999876543333333333332  1      222222111 1 11124589999


Q ss_pred             EECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCC
Q 022840           99 ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~  151 (291)
                      .|+|+++++++|+++|+++..++...++| + .++|+||+||.|||++..+.+
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G-~-~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTG-R-NMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTE-E-EEEEECTTSCEEEEEEECC--
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCc-e-EEEEECCCCCEEEEEEcCCcc
Confidence            99999999999999999988887777776 3 478999999999999987543

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.73  E-value=7.4e-17  Score=122.50  Aligned_cols=119  Identities=23%  Similarity=0.320  Sum_probs=84.9

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC---CCcccCCCCce
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGTGFG   94 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~~~~g~~   94 (291)
                      .|++.+|+||.|.|+|++++++||+++|||++....   + .  ..++..++  .  .+.+.....   +.......|..
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~g~--~--~l~l~~~~~~~~~~~~~~~~g~~   91 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-D--RKALCFGD--Q--KFNLHEVGKEFEPKAAHPVPGSL   91 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-T--EEEEEETT--E--EEEEEETTSCCSSCCSSCCTTCC
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-C--ceEEEECC--c--EEEEEEcCCCcCcccCCCCCCCc
Confidence            367899999999999999999999999999987432   1 1  33455442  2  233333211   11123445778


Q ss_pred             EEEEEEC-CHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEEE
Q 022840           95 HLAIATE-DVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        95 ~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~~  146 (291)
                      |++|.+. |+++++++|+++|+++...|....+  |....+||+|||||.|||.+
T Consensus        92 ~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           92 DICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             eEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9999886 9999999999999997755544322  22235789999999999986

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.73  E-value=2.3e-16  Score=118.81  Aligned_cols=115  Identities=20%  Similarity=0.343  Sum_probs=85.7

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCC-cccCCCCceEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-SYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~i~~   98 (291)
                      |+++++||.|.|+|++++.+||+++|||++.....  .    ..++..+.    ..+.+....... ......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD----LWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT----EEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC----EEEEEEECCCCCCCCCCCCCceEEEE
Confidence            68899999999999999999999999999876432  1    34555432    234444432111 1123447889999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+  |+++++++|+++|+++..++..  + .. .++|+||+||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~--~-~~-~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS--E-GA-SFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS--S-SE-EEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC--c-ee-EEEEECCCCCEEEEEECc
Confidence            996  9999999999999998776542  3 33 478999999999999864

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.72  E-value=5.5e-17  Score=127.94  Aligned_cols=130  Identities=28%  Similarity=0.543  Sum_probs=96.5

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccC---------------CceeEEEEeeecCce
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE---------------DQTTVLELAYSYGVT  215 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+....+..+.++++..++.               ..+..|+|....+..
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            45799999999999999999999999998765433333455566654321               024567776543211


Q ss_pred             -----eec----cCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhh
Q 022840          216 -----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -----~~~----~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                           .+.    ...|+.|++|.|+|+++++++|    +++|+++..+|...++  ++.+||+||+|+.|||++.....+
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  182 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIAT  182 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGGG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcccc
Confidence                 011    1257899999999999999999    9999999888765443  568999999999999999876543

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.72  E-value=1.8e-17  Score=127.61  Aligned_cols=120  Identities=16%  Similarity=0.194  Sum_probs=92.1

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc--------------ccceeeeeeccccCCceeEEEEeeecCcee
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------------ELKCALAMLGYAEEDQTTVLELAYSYGVTE  216 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      ..++.|+++.|+|++++.+||+++|||++..+...+              .....+.++..+    ...++|........
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCC
Confidence            356999999999999999999999999976543222              123455666543    46788876543221


Q ss_pred             -e-----ccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCC--CceEEEecc
Q 022840          217 -Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD--GWKTVLVDN  281 (291)
Q Consensus       217 -~-----~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~--G~~iel~~~  281 (291)
                       +     ..+.|++|++|.|+|+++++++|    +++|+++...+. ..  +.+++|++|||  |+.|||+|+
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGD-FE--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEE-ET--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeeccc-cC--CeeEEEEeccccCcEEEEEEec
Confidence             1     13668999999999999999999    999999977653 22  47899999999  999999985

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.72  E-value=9.2e-17  Score=120.55  Aligned_cols=120  Identities=18%  Similarity=0.155  Sum_probs=87.3

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecC------CCCcccCCCCc
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY------GVTSYDIGTGF   93 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~------~~~~~~~~~g~   93 (291)
                      |++++.|+.|.|+|++++++||++ |||++.....  ...  ...+..+ +.  ..+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~-~~--~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLD-GG--IRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECT-TS--CEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcC-CC--eEEEEecCccchhhCcccCCCCCCCe
Confidence            568999999999999999999998 9998864321  111  3334331 12  334444321      11111234577


Q ss_pred             eEEEEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           94 GHLAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|++|.|+   |+++++++|+++|+++..++...++|.+ +++|+||+||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcE-EEEEECCCCCEEEEEeCC
Confidence            89999999   9999999999999998877777777644 488999999999999877

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.72  E-value=9.8e-17  Score=121.43  Aligned_cols=118  Identities=15%  Similarity=0.183  Sum_probs=87.5

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcc-cCCCCceEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-DIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-~~~~g~~~i~~   98 (291)
                      .++++.|+.|.|+|++++.+||+++|||++....  +.    ..++..++   ...+.+.......+. ..+.+..|++|
T Consensus        22 ~m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~----~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f   92 (144)
T 2kjz_A           22 HMTHPDFTILYVDNPPASTQFYKALLGVDPVESS--PT----FSLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAF   92 (144)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--TT----EEEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEE
T ss_pred             ccCceeEEEEEeCCHHHHHHHHHHccCCEeccCC--CC----eEEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEE
Confidence            3459999999999999999999999999987543  11    34454432   234555443322221 22357889999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+   |+++++++|+++|+++..++...++| . .++|+||+||.|||++..
T Consensus        93 ~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           93 RVENDAQVDETFAGWKASGVAMLQQPAKMEFG-Y-TFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCCSCCEEETTE-E-EEEECCTTCCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEecCceecCCc-e-EEEEECCCCCEEEEEecC
Confidence            997   58999999999999988777776665 3 478999999999999753

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.72  E-value=6.5e-17  Score=118.96  Aligned_cols=119  Identities=21%  Similarity=0.281  Sum_probs=86.1

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-cceeeeeeccccCCceeEEEEeeecCcee---eccCcceeEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~  227 (291)
                      .++.|+.+.|+|++++.+||+++|||++.......+ +.+. .++..++    ..++|........   .+.+.|..|++
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLGS----QELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecCC----eEEEEEeccCCCCCCCCCCCccceEEE
Confidence            468999999999999999999999999875432222 2222 2233332    2667665332111   12345888999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      |.|+|++++++++    +++|+++...|...++ +.+.+|++||+|+.|||+|
T Consensus        79 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFL----NEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHH----HHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999999    9999998766543333 4588999999999999986

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.72  E-value=7.5e-17  Score=120.69  Aligned_cols=119  Identities=20%  Similarity=0.187  Sum_probs=89.1

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--ee-ccCcceeEEEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EY-TKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~-~~~~g~~hi~~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+....++.+...++. +    +..+.|....+..  ++ ....|..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            57899999999999999999999999876654333334445454 2    4567776643321  11 234688999999


Q ss_pred             e---cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          230 T---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |   +|+++++++|    +++|+++. .|...+.  ++.+||+||+|+.|||++..+
T Consensus        80 v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERL----AKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHH----HHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHH----HHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9   8888888888    99999986 4444444  489999999999999998643

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.72  E-value=2.6e-16  Score=115.89  Aligned_cols=114  Identities=10%  Similarity=0.035  Sum_probs=85.5

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ||..+..|+.|.|+|++++.+||+++|||++...    ...  ..++..+  .  ..+.+......    ...+..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~----~~~--~~~~~~~--~--~~l~l~~~~~~----~~~~~~~~~~   66 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV----EDD--FAGVVRD--D--VTLFISAVQDQ----VVPDNTQAWV   66 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE----CSS--EEEEEET--T--EEEEEEECSCT----TTGGGCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEec----CCC--EEEEEEC--C--EEEEEEcCCCC----CCCCceEEEE
Confidence            5667789999999999999999999999998764    122  3445433  2  23444433221    1123469999


Q ss_pred             EECCHHHHHHHHHHc------CC--eeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATEDVYKMVENIRAK------GG--NVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+|+++++++|+++      |+  ++..++...++| . .++|+||+||.|||.+..
T Consensus        67 ~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           67 WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEEC-
T ss_pred             EECCHHHHHHHHHHhcccccCCccccccCCceecCCC-C-EEEEECCCCCEEEEEEec
Confidence            999999999999999      99  888788777776 4 488999999999999864

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.71  E-value=4.1e-16  Score=116.78  Aligned_cols=119  Identities=18%  Similarity=0.195  Sum_probs=86.1

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC-C-cccCCCCceEEEEEECC
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-T-SYDIGTGFGHLAIATED  102 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~-~~~~~~g~~~i~~~v~d  102 (291)
                      ..+.|.|+|++++++||+++|||++......+ +......+..+.  .  .+.+...... . ....+.+..|++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--G--IVMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--S--EEEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--e--EEEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            57899999999999999999999998654433 333345555432  2  3444332111 1 11122233499999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++..++...++|.+ +++|+||+||.|+|++...
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPWGLR-QYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTEE-EEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHHcCCeeccCccccCCCcE-EEEEECCCCCEEEEEEEcC
Confidence            999999999999998888877777655 4889999999999998754

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.70  E-value=5.3e-16  Score=117.94  Aligned_cols=116  Identities=19%  Similarity=0.259  Sum_probs=84.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcce--------EEEEeecCCCCcccCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYF--------VVELTYNYGVTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~l~~~~~~~~~~~~~~   90 (291)
                      .|..++.|+.|.|+|++++++||+++|||++...   ++..  ..++..++....+        ...+....      ..
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~~   89 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMD--YSMVTTGPVGESGMPDEPGYINGGMMQRG------EV   89 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTT--EEEEECSCBCTTSSBCSSSCBCEEEEESS------SS
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCC--EEEEEeCCcceeecccCCcccccceeecC------CC
Confidence            4668999999999999999999999999998752   1222  4455544322111        11111110      11


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeecCCccCC-CCceEEEEEECCCCcEEEEEEcC
Q 022840           91 TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK-GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .+ .|++|.|+|+++++++|+++|+++..++...+ +|  .+++|+||+||.|||++..
T Consensus        90 ~g-~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           90 TT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNMG--FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CS-CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECTTSCEEEEEEEC
T ss_pred             Ce-EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE--EEEEEECCCCCEEEEEecC
Confidence            34 49999999999999999999999887776665 34  3588999999999999865

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.70  E-value=6.9e-16  Score=115.15  Aligned_cols=117  Identities=16%  Similarity=0.200  Sum_probs=82.3

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      .++|+||.|.|+|++++++||+++|||++.....    .  ...+..+.  ..+.+.+..... .+  ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g--~~~~l~~~~~~~-~~--~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG--DQLVCHLSDRWD-RE--VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT--EEEEEEECSCSC-SS--CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC--CEEEEEEcCccc-cc--CCCCCCeEEEEE
Confidence            5789999999999999999999999999865422    1  33444321  223333322111 11  234578999998


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccC---CCCceEEEEEECCCCcEEEEEEcC
Q 022840          101 E---DVYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .   |+++++++|+++|+++..+|...   ..+....+||+||+||.|||.+..
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            5   59999999999999987666543   122233588999999999999764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.70  E-value=1.3e-16  Score=120.77  Aligned_cols=127  Identities=17%  Similarity=0.211  Sum_probs=91.1

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccC--CceeEEEEeeecCce-e-----eccC--
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--DQTTVLELAYSYGVT-E-----YTKG--  220 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~-~-----~~~~--  220 (291)
                      ..++.|+.+.|+|++++.+||+++|||++..+...++......++..++.  ..+..|+|....... +     ...+  
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   86 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   86 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCC
Confidence            35789999999999999999999999998765432222334556664431  123567777644321 1     1123  


Q ss_pred             cceeEEEEEecchHHHHHHHHHHHHHhCCEee-cCCcccCCCCceEEEE--ECCCCceEEEecch
Q 022840          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKIT-RQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       221 ~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~-~~p~~~~~~~~~~~~~--~DP~G~~iel~~~~  282 (291)
                      .|++|++|.|+|+++++++|    +++|+++. .+|...++ +.+.+|+  +||+|+.|||++.+
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence            68899999999999999999    99999988 34543233 3456667  99999999999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.70  E-value=1.2e-16  Score=122.04  Aligned_cols=122  Identities=21%  Similarity=0.233  Sum_probs=90.6

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc--------ccceeeeeeccccCCceeEEEEeeecCcee-----e
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------ELKCALAMLGYAEEDQTTVLELAYSYGVTE-----Y  217 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~  217 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......+        .+  ...++..++   +..++|.......+     .
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPD---GTILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTT---SCEEEEEECTTCCCSSSSTT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCC---CCEEEEEecCCCCcCCCCCC
Confidence            357999999999999999999999999987632211        12  223444332   35667665433211     1


Q ss_pred             ccCcceeEEEEEec--chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          218 TKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       218 ~~~~g~~hi~~~v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      ....+..|++|.|+  |+++++++|    +++|+++..+|...++  ++.+||+||+|+.|||++.+.
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            13458899999998  999999999    9999999888876655  579999999999999998653

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.70  E-value=9.2e-17  Score=123.80  Aligned_cols=119  Identities=18%  Similarity=0.217  Sum_probs=86.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC--------CcccCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--------TSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--------~~~~~~   90 (291)
                      |++.+++||+|.|+|++++++||+++|||++......     ...++..+.    ..+.+......        .....+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCC
Confidence            5679999999999999999999999999998765332     244555432    22333321110        111123


Q ss_pred             CCceEEEEEE---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           91 TGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~g~~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|..|++|.|   +|+++++++|+++|+++..++.. +++.. .++|+||+||.|||++.+
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g~~-~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNGSY-SVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTSCE-EEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCCcE-EEEEECCCCCEEEEEeCC
Confidence            4678999999   89999999999999997644432 33444 488999999999999976

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.70  E-value=3e-16  Score=119.53  Aligned_cols=123  Identities=15%  Similarity=0.211  Sum_probs=90.7

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccC-----------cccceeeeeeccccCCceeEEEEeeec--Cce---
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDS-----------PELKCALAMLGYAEEDQTTVLELAYSY--GVT---  215 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~---  215 (291)
                      .++.|+.+.|+|++++.+||++ |||++..+...           +.......++..++  .+..++|....  ...   
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEEecCCCCcccc
Confidence            4689999999999999999999 99998754321           11223455565432  23566665432  111   


Q ss_pred             --eeccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          216 --EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       216 --~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                        ....+.|++|++|.|+|+++++++|    +++|+++..+|...++ +.+.+||+||+|+.|||++..
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEEC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEecc
Confidence              0123457889999999999999999    9999999888766553 468899999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.69  E-value=7.4e-16  Score=116.85  Aligned_cols=120  Identities=17%  Similarity=0.321  Sum_probs=86.8

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHH---HHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCC---CCccc-C
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYY---TECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYD-I   89 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY---~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~-~   89 (291)
                      ..++++++.|+.|.|+|++++++||   +++|||++.....  .+   ..|+. +  .  ..+.+.....   ..+.. .
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~---~~~~~-g--~--~~l~l~~~~~~~~~~~~~~~   83 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG---KSYKH-G--K--TYLVFVQTEDRFQTPTFHRK   83 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE---EEEEE-T--T--EEEEEEECCGGGSCSCCCTT
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC---ceEec-C--C--eEEEEEEcCCCccccccccc
Confidence            3478899999999999999999999   9999999876532  11   23444 3  2  3455554322   11111 2


Q ss_pred             CCCceEEEEEEC---CHHHHHHHHHHcCCeeec-CCccCCCC-ceEEEEEECCCCcEEEEEE
Q 022840           90 GTGFGHLAIATE---DVYKMVENIRAKGGNVTR-EPGPLKGM-TTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 ~~g~~~i~~~v~---d~~~~~~~l~~~G~~~~~-~~~~~~~g-~~~~~~~~DP~G~~iel~~  146 (291)
                      ..+..|++|.|+   |+++++++|+++|+++.. .|....++ ....+||+||+||.|||++
T Consensus        84 ~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           84 RTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             SSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             CCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            346789999999   999999999999999876 35444332 1224789999999999985

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.69  E-value=1.3e-16  Score=118.62  Aligned_cols=119  Identities=23%  Similarity=0.259  Sum_probs=88.3

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc---eeeccCcceeEEE
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~  227 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.....      ...++..+    +..+.+......   ......+|..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            3578999999999999999999999999876531      12233332    345555443221   1112356889999


Q ss_pred             EEecc-hHHHHHHHHHHHHHhCCEeecCCcccCCCC--ceEEEEECCCCceEEEecchh
Q 022840          228 ISTDD-VYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~d-~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |.|+| ++++.++|    +++|+++..+|...++..  .+.+|++||+|+.|||++..+
T Consensus        78 ~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 99999999    999999988775544422  278999999999999999753

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.69  E-value=4.9e-16  Score=116.99  Aligned_cols=117  Identities=15%  Similarity=0.112  Sum_probs=83.0

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeec-----CC-CCc-ccCCCCceE
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN-----YG-VTS-YDIGTGFGH   95 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-----~~-~~~-~~~~~g~~~   95 (291)
                      ++.|+.|.|+|++++++||+++|||++......  ..  ..++..+  .  ..+.+...     .. ... ...+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~--~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PI--FRGLDTG--K--SCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TT--EEEEECS--S--SEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cc--eEEeecC--C--EEEEEcCccccccccccccCCCCCCe-EE
Confidence            999999999999999999999999998643211  11  3334432  2  22333221     00 011 112334 49


Q ss_pred             EEEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           96 LAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      ++|.|+   |+++++++|+++|+++..+|...++|.. .++|+||+||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccE-EEEEECCCCCEEEEEEccc
Confidence            999999   5999999999999998877777666644 4889999999999998654

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.69  E-value=2.2e-16  Score=120.11  Aligned_cols=124  Identities=15%  Similarity=0.083  Sum_probs=84.3

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceee-ccCcceeEEEEEe
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+    .+  .++..++   +..+.+.......+. ....+..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~--~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TF--AMFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SE--EEEECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CE--EEEEcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            468999999999999999999999999876532    12  2333221   355666443322111 1234668999999


Q ss_pred             cc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhhhhc
Q 022840          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~  290 (291)
                      +|   +++++++|    +++|+++..+|...+.  ++.+||+||+|+.|||++..+-..+.-|
T Consensus        76 ~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~a~~~~~  132 (148)
T 3rhe_A           76 NSNEMVDEIHRQW----SDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKRTAENLYF  132 (148)
T ss_dssp             SCHHHHHHHHHHH----HHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC--------
T ss_pred             CCHHHHHHHHHHH----HhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcChhHhhhhc
Confidence            87   77777777    9999999988887776  4889999999999999997766555444

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.68  E-value=3.5e-16  Score=115.95  Aligned_cols=118  Identities=15%  Similarity=0.213  Sum_probs=80.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      ..|.|+.|.|+|++++.+||++ |||++...... .+.+...... +    +..+.+....+  ......+..|++|.|+
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~~~~~~~-~----~~~l~l~~~~~--~~~~~~~~~~l~f~v~   75 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSEVHRAVH-N----GVEFSLYSIQN--PQRSQIPSLQLGFQIT   75 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE-T----TEEEEEEECCC--CSSCCCCSEEEEEEES
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCEEEEEeC-C----CeEEEEEECCC--CcCCCCCceEEEEEeC
Confidence            3589999999999999999999 99998754221 1122222111 1    34455533221  1122335578999999


Q ss_pred             chHHHHHHHHHHHHHhCCE-eecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          232 DVYKSAEVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      |++++++++    +++|++ +..+|...++ +.+ ++|+|||||.|||.+.+..
T Consensus        76 dvd~~~~~l----~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           76 DLEKTVQEL----VKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             CHHHHHHHH----TTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC----
T ss_pred             CHHHHHHHH----HHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEeccc
Confidence            999999999    999999 8888876665 344 9999999999999997654

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.68  E-value=6.6e-16  Score=115.64  Aligned_cols=120  Identities=16%  Similarity=0.097  Sum_probs=87.3

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--eeccCcceeEEEEEec
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTD  231 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hi~~~v~  231 (291)
                      ...+.|.|+|++++.+||+++|||++..+...+ +......+..+    +..+.+.......  ....+.+++|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            457899999999999999999999988665433 33333444433    2445554322111  1112234349999999


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |++++++++    +++|+++..+|...++ +.+.++|+||+|+.|||++..+
T Consensus        78 dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           78 DVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC-
T ss_pred             CHHHHHHHH----HHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcC
Confidence            999999999    9999999988877665 4589999999999999998643

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.68  E-value=7.3e-16  Score=111.36  Aligned_cols=108  Identities=19%  Similarity=0.255  Sum_probs=80.0

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE-
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT-  100 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v-  100 (291)
                      ++++|+.|.|+|++++.+||+++|||++.....   .  ...++..++   ...+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            589999999999999999999999999875421   1  245555432   234555543221    124678999999 


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          101 --EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       101 --~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                        +|+++++++|+++|+++.. |... +  ...++|+||+||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCC-C--cEEEEEECCCCcEEEEe
Confidence              8899999999999999754 4332 2  23578999999999986

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.67  E-value=6.7e-16  Score=114.91  Aligned_cols=115  Identities=11%  Similarity=0.049  Sum_probs=86.0

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....+    .+..  +..++   +..+.+....... ....++..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST---TCEEEEESSSCCC-CTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEEe
Confidence            3679999999999999999999999999875532    1222  22111   3456665433211 12345778999999


Q ss_pred             cc---hHHHHHHHHHHHHH---hCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          231 DD---VYKSAEVVNLVTQE---LGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~---~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +|   ++++++++    ++   +|+++..+|...+.  ++.+||+||+||.|||.+.
T Consensus        81 ~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            86   88888888    99   99999988877765  4899999999999999874

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.67  E-value=1.7e-15  Score=113.04  Aligned_cols=119  Identities=12%  Similarity=0.119  Sum_probs=82.5

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +.-.+..|.|+|++++++||+++|||++.....  .    ..++..+    ...+.+...........+.+..|++|.|+
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~   75 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N----YAYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVS   75 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T----EEEEEET----TEEEEEEECCCC---------EEEEEECS
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C----eEEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeC
Confidence            445678999999999999999999999876532  1    4555543    23455554332211112224479999999


Q ss_pred             CHHHHHHHHHHcC----CeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCC
Q 022840          102 DVYKMVENIRAKG----GNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       102 d~~~~~~~l~~~G----~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~  151 (291)
                      |+++++++|+++|    +++..++...++|.+ .++|+|||||.|||.+....+
T Consensus        76 dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           76 DIDSLHTKLSPALENLPADQVEPLKNMPYGQR-EFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGEEEEEECTTSEE-EEEEECTTSCEEEEEEECCTT
T ss_pred             CHHHHHHHHHhcCCccCCccccCCcccCCCcE-EEEEECCCCCEEEEEEccccc
Confidence            9999999999655    455666667777655 478999999999999887543

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.67  E-value=4.5e-16  Score=118.69  Aligned_cols=120  Identities=18%  Similarity=0.210  Sum_probs=86.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc---eeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~~  228 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+..      ...++..+    +..+.+......   .......|..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            468999999999999999999999999886621      12333433    245555442221   11223457899999


Q ss_pred             Eec-chHHHHHHHHHHHHHhCCEeecCCcccCCCC--ceEEEEECCCCceEEEecchhhh
Q 022840          229 STD-DVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       229 ~v~-d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                      .+. |+++++++|    +++|+++..+|...++..  .+.+||+||+|+.|||++..+..
T Consensus        92 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  147 (152)
T 3huh_A           92 ITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEGH  147 (152)
T ss_dssp             EESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC----
T ss_pred             EecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccCc
Confidence            987 999999999    999999988776544432  37899999999999999976543

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.67  E-value=9.3e-16  Score=112.56  Aligned_cols=113  Identities=13%  Similarity=0.038  Sum_probs=83.6

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ||..+..++.|.|+|++++.+||+++|||++...    ...  ..++..+  .  ..+.+...... +   ..+..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~----~~~--~~~~~~~--~--~~l~l~~~~~~-~---~~~~~~~~~   66 (122)
T 1qto_A            1 MVKFLGAVPVLTAVDVPANVSFWVDTLGFEKDFG----DRD--FAGVRRG--D--IRLHISRTEHQ-I---VADNTSAWI   66 (122)
T ss_dssp             CCCCCCCCCEEEESSHHHHHHHHHHTTCCEEEEE----CSS--EEEEEET--T--EEEEEEECSCH-H---HHTTCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHhccCcEEeeC----CCC--EEEEEEC--C--EEEEEEcCCCC-C---CCCceEEEE
Confidence            4444556899999999999999999999998754    122  4445543  2  33444432211 1   113369999


Q ss_pred             EECCHHHHHHHHHHc------CC--eeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           99 ATEDVYKMVENIRAK------GG--NVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      .|+|+++++++|+++      |+  ++..++...++| + .++|+||+||.|+|.+.
T Consensus        67 ~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           67 EVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAG-R-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             EESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-E-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHhhccccccCccccccCCCcCCCCC-c-EEEEECCCCCEEEEecC
Confidence            999999999999999      99  887777777776 4 47899999999999874

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.66  E-value=4.7e-16  Score=116.82  Aligned_cols=120  Identities=18%  Similarity=0.284  Sum_probs=84.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      .+.++.+.|+|++++.+||+++|||++..+... .+.+...+++.++.  ...+++....+..+...+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            467888999999999999999999998765322 22345566664432  345676654433233345577899999999


Q ss_pred             h---HHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          233 V---YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ~---~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +   ++++++|    +++|+++..++.......+  .||+||+|+.|||+++
T Consensus        88 ~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           88 AVELAAITSKL----KHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             HHHHHHHHHHH----HHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESS
T ss_pred             cchHHHHHHHH----HHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEc
Confidence            8   8888888    9999998733221111113  3799999999999986

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.66  E-value=3.6e-15  Score=109.98  Aligned_cols=112  Identities=20%  Similarity=0.257  Sum_probs=83.2

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC
Q 022840           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d  102 (291)
                      ...++.|.|+|++++++||++ |||++...    ...  ..++..+    ...+.+......   ....+..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DAG--WMILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSS--EEEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCC--EEEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECC
Confidence            347899999999999999998 99998754    122  4445543    223445433221   112366899999999


Q ss_pred             HHHHHHHHHHcCCee-------ecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          103 VYKMVENIRAKGGNV-------TREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~-------~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++       ..+|...++|.+ .++|+||+||.|||++...
T Consensus        69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGT-MAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSE-EEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHCCCccccccCccccCCcccCcccE-EEEEECCCCCEEEEecchh
Confidence            999999999999984       566666677655 4789999999999998764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.66  E-value=8.1e-16  Score=115.90  Aligned_cols=112  Identities=15%  Similarity=0.218  Sum_probs=84.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+...  ...  .++..++  .+..+.+....      ...+..|++|.|+
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~--~~~~~~~--~~~~l~l~~~~------~~~~~~h~~~~v~   94 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA--RRW--NFLWVSG--RAGMVVLQEEK------ENWQQQHFSFRVE   94 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT--TTE--EEEEETT--TTEEEEEEECC------SSCCCCEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC--CcE--EEEEecC--CCcEEEEeccC------CCCCCceEEEEEe
Confidence            5699999999999999999999999998776422  112  3333322  24667776531      2346789999997


Q ss_pred             --chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                        |+++++++|    +++|+++. .|...+..+++.+||+||+|+.|||++
T Consensus        95 ~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           95 KSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             GGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence              899999999    99999988 444444434689999999999999985

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.66  E-value=5.1e-16  Score=117.43  Aligned_cols=110  Identities=24%  Similarity=0.302  Sum_probs=82.9

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHH
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~  236 (291)
                      +.|.|+|++++.+||+++|||++..+...++..+.+.+.+      .  +.+......  .....+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~~--~~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSEE--ALKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCHH--HHGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCcc--cCCCCcceEEEEEeCCHHHH
Confidence            8899999999999999999999876654333333443333      1  333332211  11223558999999999999


Q ss_pred             HHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          237 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +++|    +++|+++..+|...++  ++.+||+||+|+.|||++..
T Consensus        80 ~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           80 KTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             HHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEEC
T ss_pred             HHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcC
Confidence            9999    9999999988877766  58899999999999999954

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.66  E-value=6.9e-16  Score=113.79  Aligned_cols=115  Identities=12%  Similarity=0.140  Sum_probs=85.1

Q ss_pred             CCceEEEeee--CCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          152 EPLCQVMLRV--GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~~v~l~v--~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      .++.|+.+.|  +|++++.+||+++|||++..+.....+ ....++..+    +..+.+......    ...+..|++|.
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~----~~~l~l~~~~~~----~~~~~~~~~f~   79 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCG----NQEIHIGVEQNF----NPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEET----TEEEEEEECTTC----CCCSSSCEEEE
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeC----CEEEEEEecCCC----CCCCceEEEEE
Confidence            3689999999  899999999999999998764321100 112334433    245666543221    13577999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      |+|++++++++    +++|+++..+|. .+  +.+.+||+||+|+.|||+++.
T Consensus        80 v~d~~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQEL----IKQGIEVIDDHA-RP--DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHH----HHTTCCCEEECS-ST--TEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHH----HHcCCCccCCCC-CC--CeeEEEEECCCCCEEEEEeCC
Confidence            99999999999    999999887773 22  478899999999999999853

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=4e-16  Score=117.35  Aligned_cols=118  Identities=16%  Similarity=0.147  Sum_probs=84.9

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEe-----e--c-CCCCcccCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELT-----Y--N-YGVTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-----~--~-~~~~~~~~~   90 (291)
                      +.+++++|+.|.|+|++++.+||+++|||++....  +  .  ...+..     .+.+...     .  . ........+
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~--~~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~   72 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--S--FVLFET-----GFAIHEGRSLEETIWRTSSDAQEAYG   72 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--S--EEEETT-----SCEEEEHHHHHHHHHSCCC--CCCSC
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--C--cEEEec-----cceeccCchhhhhccccCCccccccC
Confidence            45789999999999999999999999999987532  1  1  233331     1223210     0  0 111112234


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           91 TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        91 ~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      .+..|++|.|+|+++++++|++ |+++..++...++|.. .++|+||+||.|||++..+
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQR-VFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCE-EEEEECTTCCEEEEEECC-
T ss_pred             CCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCE-EEEEECCCCCEEEEEecch
Confidence            5778999999999999999999 9998877777777644 4789999999999998764

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.66  E-value=6.2e-16  Score=112.70  Aligned_cols=114  Identities=19%  Similarity=0.098  Sum_probs=82.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.+.|+|++++.+||+++|||++....+    .+  ..+..++    ..+.+...........+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~----~~l~l~~~~~~~~~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC----eEEEEEcCCCCCcccCCCe-EEEEEEEC
Confidence            468999999999999999999999999864321    12  2333322    2333322111111112334 58999999


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      |+++++++|    +++|+++..+|...++ +.+.++++||+|+.|||++.
T Consensus        73 d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           73 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            999999999    9999999888876665 45889999999999999874

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.66  E-value=1.1e-15  Score=113.70  Aligned_cols=116  Identities=16%  Similarity=0.241  Sum_probs=84.7

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceee---eeeccccCCceeEEEEeeecCceeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCAL---AMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  228 (291)
                      .++.|+.+.|+|++++.+||+++|||++....+  +..+..   .++..+    +..+.+......    ...+..|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~   72 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAF   72 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEE
Confidence            468999999999999999999999999875432  111110   133322    345666543221    1457899999


Q ss_pred             Ee--cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          229 ST--DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       229 ~v--~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      .|  +|++++++++    +++|+++..+|...++ +++.+||+||+|+.|||++..
T Consensus        73 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence            99  4899999999    9999999888765444 468899999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.65  E-value=1.4e-15  Score=114.25  Aligned_cols=115  Identities=19%  Similarity=0.239  Sum_probs=83.5

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceee---eeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCAL---AMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      ++.|+.+.|+|++++.+||+++|||++..+...  ..+..   .++..+    +..+.+......    ...+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~----~~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKL----AERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCC----SSCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCC----CCCCeeEEEEE
Confidence            589999999999999999999999998765321  11110   033322    346666543211    14578999999


Q ss_pred             ec--chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          230 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      |+  |++++++++    +++|+++..+|...++ +++.+||+||+|+.|||++.+
T Consensus        74 v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHH----HHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCC
Confidence            99  999999999    9999999877655443 468899999999999999954

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.65  E-value=4.4e-16  Score=119.98  Aligned_cols=120  Identities=13%  Similarity=0.169  Sum_probs=87.2

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc--------eeeccCcc
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV--------TEYTKGNA  222 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~g  222 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+...     ...++..+    ...+.+......        .+...+.|
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCC----CEEEEEEecCCccCccccCCCCcCCCcc
Confidence            36799999999999999999999999998765432     22334432    234444332111        11123457


Q ss_pred             eeEEEEEe---cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          223 YAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       223 ~~hi~~~v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                      +.|++|.|   +|+++++++|    +++|+++..++.. ++ +++.+||+||+|+.|||++++.+.
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~-~~-g~~~~~~~DPdG~~iel~~~~~~~  136 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRW-PN-GSYSVYIRDPAGNSVEVGEGKLWG  136 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEEC-TT-SCEEEEEECTTCCEEEEEEGGGGT
T ss_pred             eeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccc-cC-CcEEEEEECCCCCEEEEEeCCCCC
Confidence            89999999   8888888888    9999998755432 22 478999999999999999987654

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.64  E-value=4.1e-15  Score=128.51  Aligned_cols=124  Identities=15%  Similarity=0.117  Sum_probs=93.3

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .+.+.+|+||+|.|+|++++.+||+++|||++..... +++.....|+..+.....  +.+.....    ....++.|++
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~--l~~~~~~~----~~~~~~~Hia  220 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHE--VACMRDMT----GGHGKLHHLA  220 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCS--EEEEECTT----SCCSEEEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceE--EEEeccCC----CCCCceeEEE
Confidence            4578999999999999999999999999999877644 333345667776543333  33443211    1223689999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |.|+|   +++++++|+++|+++...|.....+...++||+||+||.|||+...
T Consensus       221 f~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          221 FFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            99999   8888999999999987776654444455689999999999998654

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.64  E-value=9.9e-16  Score=115.86  Aligned_cols=116  Identities=16%  Similarity=0.136  Sum_probs=85.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceee-ccCcceeEEEEEe
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+.+    .+  .++..++   +..+.|.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----TF--SLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TE--EEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----Ce--EEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            478999999999999999999999999876531    12  2333222   345666543222121 2235789999999


Q ss_pred             c---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          231 D---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +   |+++++++|    +++|+++..+|...++  ++.+||+||+|+.|||+++.
T Consensus        95 ~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            7   467777777    9999999888877655  58899999999999999853

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.64  E-value=1.5e-15  Score=115.46  Aligned_cols=119  Identities=20%  Similarity=0.223  Sum_probs=78.5

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeec------CC-CCcccCCCC
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN------YG-VTSYDIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~------~~-~~~~~~~~g   92 (291)
                      +..||.||+|.|+|++++++||++ ||+........  ..  ..++.... .  ..+.+...      .. ......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~--~~--~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTD--ES--CACMVVSE-Q--AFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCB--TT--EEEEEEET-T--EEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecC--Cc--eeEEeecC-c--ceEeeeccccccccccccCCCCCCCC
Confidence            467899999999999999999998 56655433222  22  22222211 1  11222211      01 111112334


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           93 FGHLAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        93 ~~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ..|++|.|+   +++++++++.++|+.+..+|...+++  ..+||+|||||.|||+...
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~--~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFM--YGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSE--EEEEEECTTCCEEEEEEEC
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCE--EEEEEEcCCCCEEEEEEEC
Confidence            569999995   58889999999999999888876654  3488999999999998754

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.64  E-value=1.7e-15  Score=110.44  Aligned_cols=111  Identities=15%  Similarity=0.159  Sum_probs=82.7

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      .+ |+.+.|+|++++.+||+++|||++....    + . ..++..++ .....+.+.....     ..++..|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~-~-~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMDH----G-W-IVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S-S-EEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C-E-EEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEEEECC
Confidence            45 9999999999999999999999987531    1 1 22233221 1134455443211     23466899999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      ++++++++    +++|+++..+|...++ +.+.+|++||+|+.|||+++
T Consensus        75 ~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH----HHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            99999999    9999999888776664 35899999999999999975

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.64  E-value=5.2e-15  Score=112.14  Aligned_cols=120  Identities=20%  Similarity=0.203  Sum_probs=88.0

Q ss_pred             CCCCCCceEEEeeeCCccccHHHH---HHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecC---ceeec-cC
Q 022840          148 GPTPEPLCQVMLRVGDLGRSIKFY---EKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG---VTEYT-KG  220 (291)
Q Consensus       148 ~~~~~~~~~v~l~v~D~~~~~~Fy---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~~  220 (291)
                      .....++.|+.|.|+|++++.+||   +++|||++..+...  +  . .|+. +    +..+.|.....   ..+.. ..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~--~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~   84 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G--K-SYKH-G----KTYLVFVQTEDRFQTPTFHRKR   84 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E--E-EEEE-T----TEEEEEEECCGGGSCSCCCTTS
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C--c-eEec-C----CeEEEEEEcCCCcccccccccC
Confidence            345678999999999999999999   99999998765432  1  1 2333 2    34677765432   11111 23


Q ss_pred             cceeEEEEEec---chHHHHHHHHHHHHHhCCEeec-CCcccCC-CCceEEEEECCCCceEEEecc
Q 022840          221 NAYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGPIPG-LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       221 ~g~~hi~~~v~---d~~~~~~~l~~~~~~~G~~~~~-~p~~~~~-~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .|+.|++|.|+   |+++++++|    +++|+++.. +|...+. .+.+.+||+||+|+.|||+++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CCceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            57899999999   888888888    999999887 3544332 246789999999999999863

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.64  E-value=1e-15  Score=116.51  Aligned_cols=118  Identities=19%  Similarity=0.227  Sum_probs=88.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce-----eeccCcceeEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-----EYTKGNAYAQV  226 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~g~~hi  226 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+.    +  ...++..+    +..+.|.......     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            46899999999999999999999999987653    1  12334432    3456665532110     11114577899


Q ss_pred             EEEe---cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          227 AIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 ~~~v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +|.|   +|+++++++|    +++|+++..+|...+. +.+.+||+||+|+.|||++.+.+
T Consensus        74 ~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERL----VAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             EEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTTS
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCCc
Confidence            9999   8899999998    9999999888876654 35899999999999999987654

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.64  E-value=3.2e-15  Score=110.02  Aligned_cols=109  Identities=14%  Similarity=0.073  Sum_probs=83.0

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      ..|+.|.|+|++++.+||+++|||++....  .  .+  ..+..+    +..+.+......    ...+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFVE--D--DF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC--S--SE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEecC--C--CE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            468999999999999999999999987651  1  12  233322    345555543221    123447999999999


Q ss_pred             HHHHHHHHHHHHHh------CC--EeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          234 YKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +++.+++    +++      |+  ++..+|...++  ++.+|++||+|+.|||.+..
T Consensus        72 ~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEW----SEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHH----TTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHH----HHhcccccCCccccccCCceecCC--CCEEEEECCCCCEEEEEEec
Confidence            9999999    999      99  88888877765  38999999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.63  E-value=6.8e-15  Score=111.26  Aligned_cols=116  Identities=15%  Similarity=0.235  Sum_probs=78.3

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecC---C-----CCcccCCCCceEE
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY---G-----VTSYDIGTGFGHL   96 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~---~-----~~~~~~~~g~~~i   96 (291)
                      ..+.|.|+|++++++||+++|||++.......  .  ..++..+  .  ..+.+....   .     ......+.++. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~--~~~l~~g--~--~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE--E--FVYLTLD--G--VDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--T--EEEEEET--T--EEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC--C--EEEEEcC--C--eEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            56899999999999999999999987532221  2  3455543  2  233343321   1     00112234555 9


Q ss_pred             EEEECCHHHHHHHHHH-cCCeeecCCcc-------CCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           97 AIATEDVYKMVENIRA-KGGNVTREPGP-------LKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~-~G~~~~~~~~~-------~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      +|.|+|+++++++|++ +|+++..++..       ..++.. .++|+|||||.|||++....
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~-~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQK-QFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEE-EEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcce-EEEEECCCCCEEEEEEcCCC
Confidence            9999999999999999 99998776654       233333 47799999999999987643

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.63  E-value=1.5e-14  Score=123.36  Aligned_cols=123  Identities=15%  Similarity=0.149  Sum_probs=90.7

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-CCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+.+++|+||+|.|+|++++.+||+++|||++........ +.....|+..++....  +.+....      ...++.|+
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~Hi  217 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHD--IAFVEYP------EKGKLHHC  217 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCS--EEEEECS------STTEEEEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCcee--EEEecCC------CCCceeEE
Confidence            3678999999999999999999999999999876544332 2345667766543322  2222221      12358999


Q ss_pred             EEEECCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIATEDVY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|.|+|++   +++++|+++|+++...|.....+...++||+||+||.|||....
T Consensus       218 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          218 SFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            99998866   46789999999987766655444455689999999999998764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.63  E-value=2.6e-15  Score=108.38  Aligned_cols=108  Identities=19%  Similarity=0.194  Sum_probs=80.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe-
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v-  230 (291)
                      .++.|+.+.|+|++++.+||+++|||++.....   .  ...++..++   +..+.+......    ..++..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            468999999999999999999999999875421   1  234444332   355666553221    135789999999 


Q ss_pred             --cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          231 --DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 --~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                        +|++++.+++    +++|+++. .|.. .+  ++.+|++||+|+.|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEE-C---CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcC-CC--cEEEEEECCCCcEEEEe
Confidence              7888888888    99999975 4543 33  68999999999999986

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.62  E-value=5.5e-15  Score=111.17  Aligned_cols=114  Identities=24%  Similarity=0.306  Sum_probs=85.0

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee-eccCcceeEEEEEe
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+...      ..++..+    +..+.|.......+ .....+..|++|.|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecCC------cEEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            4689999999999999999999999998765321      1234432    24466654322111 12345789999999


Q ss_pred             c--chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      +  |++++++++    +++|+++..+|..    +++.+||+||+|+.|||++...
T Consensus        73 ~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           73 AEEDFEPLSQRL----EQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECCH
T ss_pred             CHHHHHHHHHHH----HHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECch
Confidence            6  888888888    9999998876532    4689999999999999998654

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.62  E-value=6.7e-15  Score=109.86  Aligned_cols=111  Identities=25%  Similarity=0.266  Sum_probs=83.9

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec-
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++.....  +    ..++..+    +..+.+......  .....+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            57899999999999999999999999876532  1    1234432    345666543221  123457789999997 


Q ss_pred             -chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          232 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 -d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                       |++++.+++    +++|+++..++..    +++.+|++||+|+.|||++...
T Consensus        72 ~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           72 ADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence             888888888    9999999876642    3689999999999999998654

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.62  E-value=1.6e-14  Score=122.94  Aligned_cols=145  Identities=19%  Similarity=0.257  Sum_probs=96.8

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCC-ceEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTG-FGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g-~~~i   96 (291)
                      .+++++++||.|.|+|++++++||+++|||++........+.....|+..+.....  +.+...       ...| ..|+
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~-------~~~g~~~hi  215 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIHH-------PEKGRLHHV  215 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEEC-------SSSSEEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCcee--EEEecC-------CCCCcceEE
Confidence            46789999999999999999999999999998765432222122345554332222  223221       1224 7899


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC--CCCCceEEEeeeCCccccHHHH
Q 022840           97 AIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP--TPEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~--~~~~~~~v~l~v~D~~~~~~Fy  171 (291)
                      +|.|+   |+++++++|+++|+++..+|...+.+....+||+||+||.|||++...  .|.. ..+.....++.+...||
T Consensus       216 ~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~-~~~~w~~~~~~~~~~~~  294 (307)
T 1mpy_A          216 SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDH-KPVTWTTDQLGKAIFYH  294 (307)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTS-CCEEEEGGGHHHHHCTT
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCC-CCeEeecccccccceec
Confidence            99999   577788999999999876665544332335799999999999998652  2221 12333445555555555


Q ss_pred             H
Q 022840          172 E  172 (291)
Q Consensus       172 ~  172 (291)
                      .
T Consensus       295 ~  295 (307)
T 1mpy_A          295 D  295 (307)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.62  E-value=3.2e-15  Score=112.05  Aligned_cols=118  Identities=18%  Similarity=0.141  Sum_probs=86.4

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecC-----c-eeeccCcceeE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG-----V-TEYTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~-~~~~~~~g~~h  225 (291)
                      .++.|+.|.|+|++++.+||++ |||++..+..  ...+  ..+..++   +..+.+.....     + .....+.+..|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPH--TEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   74 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSE--EEEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCce--EEEEcCC---CeEEEEecCccchhhCcccCCCCCCCeEE
Confidence            4689999999999999999998 9999875432  1112  2222211   34566654211     0 01123457799


Q ss_pred             EEEEec---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 i~~~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      ++|.|+   |+++++++|    +++|+++..+|...++ +.+.+||+||+|+.|||++..
T Consensus        75 l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           75 IAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            999999   899998888    9999999888876665 358899999999999999866

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.61  E-value=7.2e-15  Score=111.55  Aligned_cols=119  Identities=17%  Similarity=0.148  Sum_probs=80.4

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccC--C------
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI--G------   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~--~------   90 (291)
                      .+++++.|+.|.|+|++++.+||+++|||++.......+ .+.  ++  +.     .+.+...........  +      
T Consensus        17 ~~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~--~~--g~-----~l~l~~~~~~~~~~~~~~~~~~~g   86 (148)
T 3bt3_A           17 GYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFG--DY--GC-----VFDYPSEVAVAHLTPFRGFHLFKG   86 (148)
T ss_dssp             SCEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCE--EE--EE-----EESSCTTTTSCC--CCCSEEEEES
T ss_pred             CceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Ccc--EE--cc-----EEEEeccCCCcccccccccceeec
Confidence            458899999999999999999999999999854211112 122  22  21     133311111100000  0      


Q ss_pred             -CCceEEEE-EECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           91 -TGFGHLAI-ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 -~g~~~i~~-~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                       ....+.+| .|+|+++++++|+++|+++..+|...++|.. .++|+||+||.|+|++..
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGAR-ECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEE-EEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccE-EEEEECCCCCEEEEeeec
Confidence             11122255 9999999999999999998888877777644 488999999999999854

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.61  E-value=2.4e-15  Score=129.37  Aligned_cols=118  Identities=26%  Similarity=0.484  Sum_probs=93.6

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc-----------ccceeeeeeccccCCceeEEEEeeecCceeecc
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      ..++.|+.|.|+|++++++||+++|||++..+....           ++++.+.++.++.......++|..+.+..++..
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~  104 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKL  104 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCB
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcccc
Confidence            357999999999999999999999999987665433           345567777766555577888887665545556


Q ss_pred             CcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       220 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +.|+.|++|.|+|+   .+++    +++|+++...|       .+.+||+||||+.|||++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~-------~~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNA----RKLEWPLTEVA-------EGVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHH----HHHTCCCEEEE-------TTEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHH----HHcCCceeccC-------CceEEEECCCCCEEEEEecC
Confidence            77999999999986   5566    88999987654       23799999999999999965

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.61  E-value=1.9e-14  Score=123.47  Aligned_cols=121  Identities=20%  Similarity=0.243  Sum_probs=90.0

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .+.+++|+|++|.|+|++++.+|| ++|||++.......++.....|+..+.....  +.+...       .+.+++|++
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~--~~~~~~-------~~~~~~Hia  216 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHD--TALTGG-------NGPRMHHVA  216 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCS--EEEEES-------SBSEEEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCccc--EEEeCC-------CCCCceEEE
Confidence            467899999999999999999999 9999998765544444345666665433222  333321       123789999


Q ss_pred             EEECCHHH---HHHHHHHcCC--eeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           98 IATEDVYK---MVENIRAKGG--NVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~--~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |.|+|+++   ++++|+++|+  ++...+.....+...++||+||+||.||++...
T Consensus       217 f~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          217 FATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999998   9999999999  877555444333444689999999999998754

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.61  E-value=7.2e-15  Score=111.61  Aligned_cols=114  Identities=16%  Similarity=0.253  Sum_probs=82.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCc--------eeEEEEeeecCceeeccCcce
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ--------TTVLELAYSYGVTEYTKGNAY  223 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~l~~~~~~~~~~~~~g~  223 (291)
                      .++.|+.|.|+|++++.+||+++|||++... .  +..+  .++..++...        .....+...      ...++ 
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~--~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~~g-   91 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-P--DMDY--SMVTTGPVGESGMPDEPGYINGGMMQR------GEVTT-   91 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-T--TTTE--EEEECSCBCTTSSBCSSSCBCEEEEES------SSSCS-
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC-C--CCCE--EEEEeCCcceeecccCCcccccceeec------CCCCe-
Confidence            5799999999999999999999999998763 1  1222  2333222110        111222111      01135 


Q ss_pred             eEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      .|++|.|+|+++++++|    +++|+++..+|...++. ++.+||+||+|+.|||++..
T Consensus        92 ~~l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            49999999999999999    99999998888766632 58999999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.61  E-value=3.3e-15  Score=109.58  Aligned_cols=109  Identities=15%  Similarity=0.072  Sum_probs=82.1

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      ..++.|.|+|++++.+||+++|||++....   +   ...++..+    +..+.+......   + ..+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~---~~~~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGD---R---DFAGVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEEC---S---SEEEEEET----TEEEEEEECSCH---H-HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCC---C---CEEEEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECCH
Confidence            357889999999999999999999987541   1   12333432    345666543221   1 12337999999999


Q ss_pred             HHHHHHHHHHHHHh------CC--EeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          234 YKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +++++++    +++      |+  ++..+|...++  ++.++++||+|+.|||.+++
T Consensus        72 d~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  122 (122)
T 1qto_A           72 DALHEEW----ARAVSTDYADTSGPAMTPVGESPA--GREFAVRDPAGNCVHFTAGE  122 (122)
T ss_dssp             HHHHHHH----TTTSCSCTTCTTSCEECCCEEETT--EEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHH----HhhccccccCccccccCCCcCCCC--CcEEEEECCCCCEEEEecCC
Confidence            9999999    999      99  88888877665  48899999999999999863

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.61  E-value=8.9e-15  Score=109.05  Aligned_cols=120  Identities=15%  Similarity=0.079  Sum_probs=82.6

Q ss_pred             CCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++.....      ....+...+    ..+.+....... .+...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g----~~~~l~~~~~~~-~~~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFG----DQLVCHLSDRWD-REVSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT----EEEEEEECSCSC-SSCCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeC----CEEEEEEcCccc-ccCCCCCCeEEEE
Confidence            45789999999999999999999999999865422      122233211    123333321110 0123466899998


Q ss_pred             ec---chHHHHHHHHHHHHHhCCEeecCCccc---CCCCceEEEEECCCCceEEEecchhh
Q 022840          230 TD---DVYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       230 v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~---~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +.   |++++.++|    +++|+++..+|...   ...+.+.+||+||+|+.|||.+..+.
T Consensus        75 ~~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           75 FRDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             EcChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            85   477777777    99999998777653   12234789999999999999986543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.61  E-value=3.9e-15  Score=111.06  Aligned_cols=120  Identities=15%  Similarity=0.130  Sum_probs=81.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      .-.+..|.|+|++++.+||+++|||++..+.+.      ..++..+    +..+.+.........+...+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHSN------YAYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEETT------EEEEEET----TEEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCCC------eEEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            345678999999999999999999998765321      2334432    356666554332211222344799999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      ++++++++..+-.+.|+++..+|...++ +.+.++|+||+|+.|||.+...
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEccc
Confidence            9999999922111445567777766665 4589999999999999998654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.60  E-value=1.6e-14  Score=109.77  Aligned_cols=117  Identities=24%  Similarity=0.248  Sum_probs=75.7

Q ss_pred             CCCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeec-------CceeeccCcc
Q 022840          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-------GVTEYTKGNA  222 (291)
Q Consensus       150 ~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-------~~~~~~~~~g  222 (291)
                      ...++.||.|.|+|++++.+||++ +|+..........  .......  .   ...+.+....       .......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES--CACMVVS--E---QAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT--EEEEEEE--T---TEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc--eeEEeec--C---cceEeeeccccccccccccCCCCCCCC
Confidence            357899999999999999999988 5555443332221  1111111  1   1222221111       0001112335


Q ss_pred             eeEEEEEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       223 ~~hi~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ..|++|.|.+   ++++++++    .+.|+++..+|...++  ++.+||+|||||.|||+.
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~----~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTA----LGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHH----HHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             eeEEEEEeccHHHHHHHHHHH----HhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            5799999965   45555555    9999999999987655  789999999999999984

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.60  E-value=1.3e-14  Score=107.00  Aligned_cols=112  Identities=21%  Similarity=0.261  Sum_probs=83.3

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecch
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  233 (291)
                      ..++.+.|+|++++.+||++ |||++..+.    .  ...++..+    +..+.+....+.   ....+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD----A--GWMILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC----S--SEEEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC----C--CEEEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            46789999999999999998 999987551    1  22334432    345666543321   1234678999999999


Q ss_pred             HHHHHHHHHHHHHhCCEe-------ecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          234 YKSAEVVNLVTQELGGKI-------TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~-------~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +++++++    +++|+++       ..+|...++ +.+.++++||+|+.|||++....
T Consensus        70 ~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           70 AEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHHHHH----HHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhh
Confidence            9999999    9999994       666666554 45899999999999999997653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.60  E-value=7.6e-15  Score=110.40  Aligned_cols=117  Identities=17%  Similarity=0.169  Sum_probs=82.3

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeee-----cC--ceeeccCcceeE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS-----YG--VTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~--~~~~~~~~g~~h  225 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+...+  .+  .++..+    +..+.+...     ..  ..+...+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IF--RGLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TE--EEEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ce--EEeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            7899999999999999999999999986543211  12  223322    233433221     00  001112345 59


Q ss_pred             EEEEec---chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 i~~~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      ++|.|+   |+++++++|    +++|+++..+|...++ +.+.+||+||+|+.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            999999   588888888    9999999888876654 4789999999999999998543

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.59  E-value=7.3e-15  Score=111.39  Aligned_cols=115  Identities=17%  Similarity=0.210  Sum_probs=81.9

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc---eeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~~  228 (291)
                      .++.|+.|.|+|++++.+||+++|||++......    .  ..+..+    ...+.+......   ......+|..|++|
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~----~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~g~~~~~~   95 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKED----R--KALCFG----DQKFNLHEVGKEFEPKAAHPVPGSLDICL   95 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT----E--EEEEET----TEEEEEEETTSCCSSCCSSCCTTCCEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecCCC----c--eEEEEC----CcEEEEEEcCCCcCcccCCCCCCCceEEE
Confidence            5689999999999999999999999998754321    1  223332    234544432111   11123457788999


Q ss_pred             Eec-chHHHHHHHHHHHHHhCCEeecCCcccCCCC--ceEEEEECCCCceEEEec
Q 022840          229 STD-DVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~-d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DP~G~~iel~~  280 (291)
                      .+. |+++++++|    +++|+++..+|...++..  .+.+||+||||+.|||++
T Consensus        96 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           96 ITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             ECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            886 999999999    999999887665433322  357999999999999986

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.58  E-value=3.5e-14  Score=120.52  Aligned_cols=122  Identities=16%  Similarity=0.257  Sum_probs=87.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC--------C-CeeEEEeccCCCCcceEEEEeecCCCCcccC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE--------E-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDI   89 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~--------~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~   89 (291)
                      ..+++++||.|.|+|++++++||+++|||++......+.        + .....|+..+.....  +.+....      .
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~  209 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHS--LAFLPMP------T  209 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCS--EEEESSC------C
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccE--EEEecCC------C
Confidence            457899999999999999999999999999875432221        1 234556655432222  3333211      1


Q ss_pred             CCCceEEEEEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           90 GTGFGHLAIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 ~~g~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ..+..|++|.|+|+++   ++++|+++|+++..+|...+.+...++||+||+||.|||+...
T Consensus       210 ~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          210 SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            3467899999998655   5999999999987766554444344589999999999999754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.58  E-value=4.5e-14  Score=120.48  Aligned_cols=116  Identities=16%  Similarity=0.297  Sum_probs=88.2

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ..++++|+||+|.|+|++++.+||+++|||++.....  +   ...|+..+.....  +.+...       . .|+.|++
T Consensus       136 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~~~~--l~l~~~-------~-~g~~hi~  200 (310)
T 3b59_A          136 EGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSAHHR--IAILPG-------P-PCLNHVA  200 (310)
T ss_dssp             CCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSBSCS--EEEEES-------S-SEEEEEE
T ss_pred             CCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCCcce--EEEECC-------C-CceEEEE
Confidence            3578999999999999999999999999999875431  1   2566665433322  333332       1 4789999


Q ss_pred             EEECCHHHH---HHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           98 IATEDVYKM---VENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |.|+|++++   +++|+++|+++...+.....+...++||+||+||.||+.+..
T Consensus       201 f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          201 YDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence            999997776   999999999987666554444444689999999999999865

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.56  E-value=5.1e-14  Score=119.00  Aligned_cols=121  Identities=18%  Similarity=0.218  Sum_probs=86.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC--CC-CeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      +.+++|+|+.|.|+|++++++||+++|||++......+  .+ .....|+..+.....  +.+....      ...+.+|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~h  209 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHH  209 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcce--EEEecCC------CCCceEE
Confidence            56799999999999999999999999999987543221  11 123456655432222  3333211      1247899


Q ss_pred             EEEEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCc-EEEEEEcC
Q 022840           96 LAIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~-~iel~~~~  148 (291)
                      ++|.|+|+++   ++++|+ +|+++..+|...+.+...++||+||+|| .|||....
T Consensus       210 iaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          210 FMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999998664   677999 9999877766555544445799999999 99999764

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.56  E-value=5.5e-15  Score=111.07  Aligned_cols=115  Identities=16%  Similarity=0.191  Sum_probs=82.7

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEE-----eee---cCceeeccCcc
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLEL-----AYS---YGVTEYTKGNA  222 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~~---~~~~~~~~~~g  222 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....+  .  + + .+..     +..+..     ...   ....+...+.+
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~-~-~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~   74 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S--F-V-LFET-----GFAIHEGRSLEETIWRTSSDAQEAYGRR   74 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S--E-E-EETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCS
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C--c-E-EEec-----cceeccCchhhhhccccCCccccccCCC
Confidence            3678999999999999999999999999875431  1  1 1 2221     122221     010   01111223457


Q ss_pred             eeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       223 ~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      ..|++|.|+|++++++++    ++ |+++..+|...++ +.+.+|++||+|+.|||++..
T Consensus        75 ~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             SCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC
T ss_pred             ceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecc
Confidence            789999999999999999    99 9999888877665 458999999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.55  E-value=1.8e-13  Score=117.80  Aligned_cols=121  Identities=16%  Similarity=0.130  Sum_probs=83.9

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCC-CceEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT-GFGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~-g~~~i   96 (291)
                      ...+.+|+||+|.|+|++++.+||+++|||++.....   +   ...+..+.....  +.+...........+. +++|+
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~---~---~~~~~~g~~~~~--l~l~~~~~~~~~~~g~g~~~Hi  219 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG---D---FVRYRSAGDIGN--VIDLKLTPIGRGQMGAGTVHHI  219 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET---T---EEEEECSSSSSC--EEEEESSCCCBCBCSBTEEEEE
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC---C---EEEEEeCCCCcE--EEEEeCCCCCcCCCCCcceEEE
Confidence            3578999999999999999999999999999976532   1   223333322223  3333332222222333 48899


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      ||.|+|   ++++.++|+++|+.+.. .....+  ...+||+||+|++|||....+
T Consensus       220 Af~v~d~~~l~~~~~~L~~~G~~~~~-~~~r~~--~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          220 AWRANDDEDQLDWQRYIASHGYGVTP-VRDRNY--FNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCCC-CEECSS--SEEEEEECTTSCEEEEEESCS
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCCccc-cccCCc--EEEEEEECCCCcEEEEEeCCC
Confidence            999998   66789999999998543 222222  234899999999999998753

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.54  E-value=4.9e-14  Score=119.94  Aligned_cols=121  Identities=14%  Similarity=0.229  Sum_probs=85.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC--CC-CeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      ..+++|+||.|.|+|++++.+|| ++|||++......+  ++ .....|+..+.....  +.+...      ....+..|
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~h  212 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINH  212 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceE--EEEecC------CCCCCceE
Confidence            35789999999999999999999 99999986432111  11 123455554432222  222221      11247899


Q ss_pred             EEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           96 LAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++|.|+|   +++++++|+++|+++...|.....+...++||+||+||.|||+...
T Consensus       213 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          213 LMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999998   6678889999999987666555444444579999999999999764

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.54  E-value=5.3e-14  Score=106.29  Aligned_cols=117  Identities=16%  Similarity=0.085  Sum_probs=79.6

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecC--------ceeeccCcceeEE
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG--------VTEYTKGNAYAQV  226 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--------~~~~~~~~g~~hi  226 (291)
                      ..+.|.|+|++++.+||+++|||++......  ..+  .++..+    +..+.|....+        ....+.+.|+. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EEF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GTE--EEEEET----TEEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CCE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            4588999999999999999999998743221  112  334432    23455543211        00112234655 9


Q ss_pred             EEEecchHHHHHHHHHHHHH-hCCEeecCCccc------CCCCceEEEEECCCCceEEEecchhh
Q 022840          227 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~-~G~~~~~~p~~~------~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      +|.|+|+++++++|    ++ +|+++..+|...      ...+++.++|+||||+.|||++....
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCCC
Confidence            99999999999999    99 999998877641      22245789999999999999986543

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.54  E-value=1.1e-13  Score=117.30  Aligned_cols=121  Identities=16%  Similarity=0.216  Sum_probs=87.2

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC--CC-CeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      ..+++++|+.|.|+|++++++||+++|||++......+  .+ .....|+..+.....  +.+...  +    ...+..|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~l~~~--~----~~~~~~h  209 (297)
T 1lgt_A          138 TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHT--LAIAAF--P----LPKRIHH  209 (297)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC--C----CSSSEEE
T ss_pred             cCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcce--EEEEcC--C----CCCCceE
Confidence            35789999999999999999999999999987542211  11 123456654332222  333322  1    1347889


Q ss_pred             EEEEECCHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           96 LAIATEDVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++|.|+|++++.   ++ +++|+++..+|...+++...++||+||+||.|||++..
T Consensus       210 iaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          210 FMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            999999988776   88 99999988777666555554589999999999999764

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.53  E-value=2.5e-13  Score=117.23  Aligned_cols=121  Identities=19%  Similarity=0.198  Sum_probs=83.8

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCc-ceEEEEeecCCCCcccCCCCceEE
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS-YFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+++++++||+|.|+|++++++||+++|||++.....    .  ..++..++... ...+.+.. ..........++.|+
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~hi  247 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q--EAIFQSIKGEAFGEIVVKYL-DGPTEKPGRGSIHHL  247 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S--EEEEESSTTCSTTCEEEEEC-CSSBCBCCBTCEEEE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----C--eEEEEecCCCCceEEEEecc-CCCCCCCCCCceEEE
Confidence            4678999999999999999999999999999876432    1  23333321111 12233322 111111112357899


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|.|+   |+++++++|+++|+++. ++... ++ ...+||+||+||.|||++..
T Consensus       248 af~v~~~~dv~~~~~~l~~~G~~~~-~~~~~-~~-~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          248 AIRVKNDAELAYWEEQVKQRGFHSS-GIIDR-FY-FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCC-CCEEC-SS-EEEEEEECTTCCEEEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCcee-eeeec-Cc-eEEEEEECCCCCEEEEEEcC
Confidence            99998   69999999999999985 44443 23 33588999999999999764

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.52  E-value=1.1e-13  Score=117.48  Aligned_cols=120  Identities=13%  Similarity=0.201  Sum_probs=84.2

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC--CC-CeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ..++++|+.|.|+|++++++|| ++|||++......+  ++ .....|+..+.....  +.+...  .    ...+..|+
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~--~----~~~~~~hi  216 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHS--IAFGAM--P----AAKRLNHL  216 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCS--EEECSC--C----CSSSEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcE--EEEecC--C----CCCceeEE
Confidence            4579999999999999999999 99999876432211  22 234556655432222  222211  1    12467899


Q ss_pred             EEEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           97 AIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +|.|+|+++   ++++|+++|+++..+|.....+...++||+||+||.|||+...
T Consensus       217 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          217 MLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            999998764   6779999999987766655544444589999999999999753

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.51  E-value=3.5e-13  Score=113.32  Aligned_cols=119  Identities=18%  Similarity=0.260  Sum_probs=83.7

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      ...+.|+.|.|+|++++++||+++|||++......+...  ...+..+..  .+ ..+....    .....+..+++|.|
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~--~~~~~~~~~--~~-~~~~~~~----~~~~~~~~~~~~~v  232 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQN--YRVLKAGDA--EV-GGCMEPP----MPGVPNHWHVYFAV  232 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTE--EE-EEEECCS----STTCCSEEEEEEEC
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcc--eEEEEcCCc--cE-eeecCCC----CCCCCCeEEEEEEe
Confidence            467999999999999999999999999986532111122  233333221  11 1121111    11223557899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +|+++++++|+++|+++..+|...+++.+ +++|+||+||.|+|++..+
T Consensus       233 ~dvd~~~~~~~~~G~~~~~~p~~~~~~~~-~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          233 DDADATAAKAAAAGGQVIAEPADIPSVGR-FAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTTEE-EEEEECTTSCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHcCCEEecCCeEcCCCeE-EEEEECCCCCEEEEEecCC
Confidence            99999999999999999888877776544 5889999999999998754

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.49  E-value=3.2e-13  Score=117.43  Aligned_cols=130  Identities=18%  Similarity=0.308  Sum_probs=91.4

Q ss_pred             CCCCceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEee--cCCCCeeEEEeccCCCCcceEEEEeecCCC--Cc----
Q 022840           17 PKKDKRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRD--VPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TS----   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~----   86 (291)
                      ..+++++|+||++.|+  |++++.+||+++|||++.....  .+.......++..++.  ...|++......  ..    
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g--~~~l~l~~~~~~~~~~~~~~  229 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASG--AVTLTLIEPDRNADPGQIDE  229 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTS--CCEEEEEEECTTSBCCHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCC--CEEEEEeeecCCCCCchhHH
Confidence            3467899999999999  9999999999999999875432  1222334566664332  334555543321  11    


Q ss_pred             c---cCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCC---------CCc-------eEEEEEECCCCcEEEEEEc
Q 022840           87 Y---DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK---------GMT-------THFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        87 ~---~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~---------~g~-------~~~~~~~DP~G~~iel~~~  147 (291)
                      +   ..+.|++||||.|+|+++++++|+++|+++...|....         .+.       ..++|++||+|++++|+..
T Consensus       230 ~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          230 FLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            1   13568999999999999999999999999776653210         000       0147899999999999975


Q ss_pred             C
Q 022840          148 G  148 (291)
Q Consensus       148 ~  148 (291)
                      +
T Consensus       310 ~  310 (357)
T 2r5v_A          310 S  310 (357)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.49  E-value=2.2e-12  Score=97.93  Aligned_cols=123  Identities=15%  Similarity=0.179  Sum_probs=82.1

Q ss_pred             ceeEEEEEEEeC-CHHHHHHHHHHhcCCEEeeEeecCC------------CCeeEEEeccCCCCcceEEEEeecCCCCcc
Q 022840           21 KRRFLHAVYRVG-DLDRTIKYYTECFGMELLRKRDVPE------------EKYSNAFLGFGPEQSYFVVELTYNYGVTSY   87 (291)
Q Consensus        21 ~~~i~hv~l~v~-D~~~~~~FY~~~lG~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   87 (291)
                      .+++ +..|.|. |+++|++||+++||+++.......+            +......+..+  ..  .+.+.........
T Consensus         2 ~m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~--~~--~l~~~d~~~~~~~   76 (149)
T 1u6l_A            2 SLQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG--SF--ALMASDNHPAYPY   76 (149)
T ss_dssp             CCEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET--TE--EEEEEECCTTSCC
T ss_pred             cceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC--CE--EEEEEcCCCccCC
Confidence            3554 4889999 9999999999999999875422111            22223334433  21  2222222111011


Q ss_pred             cCCCCceEEEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCC
Q 022840           88 DIGTGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        88 ~~~~g~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~  151 (291)
                      ....| .+++|.|+|   +++++++|+ +|.++..++...+||.+ +++|+||+|+.|+|.+.....
T Consensus        77 ~~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r-~~~v~Dp~G~~w~l~~~~~~~  140 (149)
T 1u6l_A           77 EGIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQDRE  140 (149)
T ss_dssp             CCCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESCC--
T ss_pred             CCCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccc-eEEEECCCCCEEEEEEecccC
Confidence            11223 589999998   789999985 89999999999898765 478999999999999876543

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.49  E-value=9.1e-14  Score=105.38  Aligned_cols=115  Identities=16%  Similarity=0.140  Sum_probs=77.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeee-ccCcccceeeeeeccccCCceeEEEEeeecCceeecc--C-------c
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRT-IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK--G-------N  221 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~--~-------~  221 (291)
                      .++.|+.|.|+|++++.+||+++|||++... ...++  ...  ++      . .+.+.......+...  +       +
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~--~g------~-~l~l~~~~~~~~~~~~~~~~~~~g~~   88 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD--YG------C-VFDYPSEVAVAHLTPFRGFHLFKGEP   88 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE--EE------E-EESSCTTTTSCC--CCCSEEEEESCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE--Ec------c-EEEEeccCCCcccccccccceeeccC
Confidence            4689999999999999999999999998531 11122  122  11      1 133311111000000  1       1


Q ss_pred             ceeEEEE-EecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          222 AYAQVAI-STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       222 g~~hi~~-~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +.++.+| .|+|++++++++    +++|+++..+|...++ +.+.+||+||+|+.|||.+..
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence            1122255 999999999999    9999999888877664 458899999999999999853

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.49  E-value=2.3e-13  Score=105.29  Aligned_cols=119  Identities=16%  Similarity=0.158  Sum_probs=78.2

Q ss_pred             ceEEEeeeCC--ccccHHHHHHhcCCeeeeec-------cCcccceeeeeeccccCCceeEEEEeeecCc--eeecc--C
Q 022840          154 LCQVMLRVGD--LGRSIKFYEKALGMKLLRTI-------DSPELKCALAMLGYAEEDQTTVLELAYSYGV--TEYTK--G  220 (291)
Q Consensus       154 ~~~v~l~v~D--~~~~~~Fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~~~--~  220 (291)
                      -.+..|.|.|  ++++++||+++|||++....       ....+.+....+..+    +..+.+......  .+...  +
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCC
Confidence            4678899999  99999999999999987543       111122222223322    223444332111  01111  2


Q ss_pred             cceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCccc--CCCCceEEEEECCCCceEEEecchhh
Q 022840          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       221 ~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      .+ .|++|.|+|+++++++|    +++|++ ..+|...  ++  +++++|+||+|+.|+|++....
T Consensus       101 ~g-~~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~~  158 (166)
T 1xy7_A          101 SG-VTFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKTV  158 (166)
T ss_dssp             CC-CEEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC----
T ss_pred             Cc-EEEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecCC
Confidence            33 58999999999999999    999999 8888776  65  7899999999999999986543

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.48  E-value=8.5e-13  Score=102.05  Aligned_cols=119  Identities=16%  Similarity=0.129  Sum_probs=78.6

Q ss_pred             eeEEEEEEEeCC--HHHHHHHHHHhcCCEEeeEe-------ecCCCCeeEEEeccCCCCcceEEEEeecCCC-C-cccC-
Q 022840           22 RRFLHAVYRVGD--LDRTIKYYTECFGMELLRKR-------DVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-T-SYDI-   89 (291)
Q Consensus        22 ~~i~hv~l~v~D--~~~~~~FY~~~lG~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~-~~~~-   89 (291)
                      ..-.++.|.|+|  ++++++||+++|||++....       ....+......+..+.  .  .+.+...... . +... 
T Consensus        23 ~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g--~--~l~l~~~~~~~~~~~~~~   98 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--S--SFVVCDVSSLPGFSTAKS   98 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--E--EEEEEEGGGSTTCCCCCT
T ss_pred             CceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC--e--EEEEeCCCcccCCccccC
Confidence            445789999999  99999999999999987532       1111222233344432  1  2333322111 0 1111 


Q ss_pred             -CCCceEEEEEECCHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCcEEEEEEcC
Q 022840           90 -GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 -~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                       +.+ .+++|.|+|+++++++|+++|++ ..++...  ++ .+ +++|+||+||.|+|++..
T Consensus        99 ~~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r-~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A           99 EGSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GF-KGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             TSCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TE-EEEEECTTSCEEEEEC--
T ss_pred             CCCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cE-EEEEECCCCCEEEEEeec
Confidence             223 48999999999999999999999 8888877  66 44 588999999999999765

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.48  E-value=3.1e-13  Score=117.52  Aligned_cols=117  Identities=21%  Similarity=0.140  Sum_probs=83.3

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .+|.||.|.|+|++++.+||+++|||++..+.+      ...++...+......+.+..       ...+++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~-------~~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTK-------GPVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEecc-------CCCCCcceEEEEeC
Confidence            368999999999999999999999999887632      12334433333344555533       12458899999998


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      + .+.++++.++|+++|+++...+.......++.++|+||+|+.|||+...
T Consensus        83 s-~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~  132 (365)
T 4ghg_A           83 T-PEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFET  132 (365)
T ss_dssp             S-HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             C-HHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEe
Confidence            6 3333444445599999987766543333467899999999999998643

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.43  E-value=1.4e-11  Score=91.97  Aligned_cols=118  Identities=16%  Similarity=0.247  Sum_probs=80.5

Q ss_pred             eeEEEEEEEeC--CHHHHHHHHHHhc-CCEEeeEeecCC------CCeeEEEeccCCCCcceEEEEeecCCCCcccCCCC
Q 022840           22 RRFLHAVYRVG--DLDRTIKYYTECF-GMELLRKRDVPE------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTG   92 (291)
Q Consensus        22 ~~i~hv~l~v~--D~~~~~~FY~~~l-G~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g   92 (291)
                      +++. +.|.+.  |++++++||+++| |+++.......+      +......+..+.  ..+.+ ......+ .... ..
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g--~~~~~-~~~~~~~-~~~~-~~   78 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--QSVHC-IDSHVRH-AFDF-TP   78 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--EEEEE-EEESSCC-SCCC-CT
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC--EEEEE-ECCCCCC-CCCC-CC
Confidence            4555 778887  9999999999999 999864212111      233333344432  12211 1111011 1111 12


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           93 FGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      ...++|.|+|   +++++++|+ +|.++..++...++|.+ +++++||+|+.|+|...
T Consensus        79 ~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~-~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           79 AFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             TEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcce-EEEEECCCCCEEEEEec
Confidence            3578999999   999999999 99999999999998865 47899999999999863

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.41  E-value=9.6e-12  Score=105.14  Aligned_cols=169  Identities=13%  Similarity=0.083  Sum_probs=103.3

Q ss_pred             CceEEEEEECC-HHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCcEEEEEEcC---CCCCCceEEEeeeCCcc
Q 022840           92 GFGHLAIATED-VYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG---PTPEPLCQVMLRVGDLG  165 (291)
Q Consensus        92 g~~~i~~~v~d-~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DP~G~~iel~~~~---~~~~~~~~v~l~v~D~~  165 (291)
                      ++..|.+.|.. =..+..-+++.|..........  ..|.         +-..+++....   ..+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            56667777732 2234555677888754321110  1111         11233333322   12223467889999999


Q ss_pred             ccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec-chHHHHHHHHHHH
Q 022840          166 RSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLVT  244 (291)
Q Consensus       166 ~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~-d~~~~~~~l~~~~  244 (291)
                      ++.+||+++|||++......+ +.+.  .+..++......+.+...    +...+.+..+++|.|+ |++++++++    
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~dvd~~~~~~----  264 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAAV----PGPGPVEPVRLHLDAAGTADSLHRRA----  264 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEEC----CCSSCCCCCEEEEEEESCHHHHHHHH----
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCccccccccccC----CCcCCCCceEEEEEcCccHHHHHHHH----
Confidence            999999999999987433222 2222  333332111122222111    1011223468999999 999999999    


Q ss_pred             HHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          245 QELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       245 ~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .++|+++..+|...++ +.+.++|+||+||.|+|.++
T Consensus       265 ~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          265 VDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            9999999988877664 46899999999999999874

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.39  E-value=2.2e-11  Score=102.97  Aligned_cols=121  Identities=12%  Similarity=0.001  Sum_probs=83.3

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      .......++.+.|+|++++++||+++|||++......+ +  ....+..+.......+.+.....    ..+....+++|
T Consensus       179 ~~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  251 (301)
T 2zw5_A          179 PLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-P--EFAEAALTPWSAGPRFRLAAVPG----PGPVEPVRLHL  251 (301)
T ss_dssp             SCEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-E--EEEEEESSSSSSSSEEEEEECCC----SSCCCCCEEEE
T ss_pred             hcccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-c--cEEEEEcCCCccccccccccCCC----cCCCCceEEEE
Confidence            34445578899999999999999999999987433221 1  12344443311101122211110    11113457999


Q ss_pred             EEC-CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           99 ATE-DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~-d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      .|+ |+++++++|+++|+++..+|...++|.. +++|+|||||.|+|.+.
T Consensus       252 ~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          252 DAAGTADSLHRRAVDAGARVDGPPVRRPWGRS-EFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EcCccHHHHHHHHHHcCCccccCcccCCCcce-EEEEECCCCCEEEeeCC
Confidence            998 9999999999999999888888777755 47899999999999874

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.38  E-value=2.8e-12  Score=105.68  Aligned_cols=113  Identities=15%  Similarity=0.257  Sum_probs=80.6

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..++.||.+.|+|++++.+||+++|||++..+..      ..+++..+    ...+.+.....     .+.++.|++|.|
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g----~~~l~l~~~~~-----~~~~~~hiaf~V   88 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG----VSQIQFRAAAD-----GTKPFYHIAINI   88 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEET----TEEEEEEECCT-----TCCCCCEEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeC----CEEEEEEECCC-----CCCCeeEEEEEe
Confidence            4679999999999999999999999999876532      12344433    24555544221     234689999998


Q ss_pred             cc--hHHHHHHHHHHHHHhCCEeecC-Ccc---cCCCCceEEEEECCCCceEEEecchh
Q 022840          231 DD--VYKSAEVVNLVTQELGGKITRQ-PGP---IPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d--~~~~~~~l~~~~~~~G~~~~~~-p~~---~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      ++  ++++.++|    +++ +++..+ +..   ....+.+.+||+||||+.|||++.+.
T Consensus        89 ~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           89 AANHFQEGKAWL----SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             CTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             cHHHHHHHHHHH----Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            64  66666666    999 887653 221   12335789999999999999999654

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.34  E-value=1.7e-11  Score=92.95  Aligned_cols=116  Identities=16%  Similarity=0.125  Sum_probs=75.8

Q ss_pred             EEEeeeC-CccccHHHHHHhcCCeeeeeccCc----------c--cceeeeeeccccCCceeEEEEeeecCceeeccCcc
Q 022840          156 QVMLRVG-DLGRSIKFYEKALGMKLLRTIDSP----------E--LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA  222 (291)
Q Consensus       156 ~v~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g  222 (291)
                      ...|.|. |.+++++||+++||+++.......          +  +......+..+    +..+-+.........+...|
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            4678888 999999999999999987542110          0  21111122222    22333332211101112234


Q ss_pred             eeEEEEEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       223 ~~hi~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                       .+++|.|+|   +++++++|    + +|+++..+|...++ +.++++++||+|+.|+|++..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEec
Confidence             689999998   55666666    6 79999999988876 458899999999999999853

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.32  E-value=3.5e-11  Score=89.71  Aligned_cols=114  Identities=16%  Similarity=0.131  Sum_probs=76.0

Q ss_pred             EEeeeC--CccccHHHHHHhc-CCeeeee--ccC----cccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEE
Q 022840          157 VMLRVG--DLGRSIKFYEKAL-GMKLLRT--IDS----PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~--D~~~~~~Fy~~~l-G~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  227 (291)
                      ..|.+.  |.+++.+||+++| |+++...  ...    +++.+....+..+    +..+-+...........+++ +.++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~----g~~~~~~~~~~~~~~~~~~~-~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFTPA-FSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCCTT-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC----CEEEEEECCCCCCCCCCCCc-eEEE
Confidence            567886  9999999999999 9998642  211    1122222222322    12232222210011111233 6799


Q ss_pred             EEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      |.|+|   ++++++++    . +|+++..+|...++ +.++++++||+|+.|+|...
T Consensus        84 ~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEAL----S-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHH----H-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCEEecccccCCC-cceEEEEECCCCCEEEEEec
Confidence            99999   88888888    9 99999999988877 46899999999999999873

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.31  E-value=7e-11  Score=88.28  Aligned_cols=120  Identities=13%  Similarity=0.141  Sum_probs=80.4

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhc-CCEEeeEeecC------CCCeeEEEeccCCCCcceEEEEeecCCCCcccCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECF-GMELLRKRDVP------EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~   91 (291)
                      |+++++...-+.+.|.++|++||+++| |+++.......      ++......+.+++  ..  +.... ..+. . .. 
T Consensus         1 M~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~--~~--~m~~d-~~~~-~-~~-   72 (139)
T 1tsj_A            1 MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG--QV--FMAID-ANSG-T-EL-   72 (139)
T ss_dssp             CCCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT--EE--EEEEC-----------
T ss_pred             CCCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC--EE--EEEEC-CCCC-C-Cc-
Confidence            345666666555669999999999999 99987432221      1233344454432  11  11111 1111 1 11 


Q ss_pred             CceEEEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           92 GFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        92 g~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      . ..+++.|+|   +++++++|+ +|+++..++...+||.+. .+|+||+|+.|+|.....
T Consensus        73 ~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~-g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           73 P-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREF-AWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEE-EEEECTTSCEEEEEECC-
T ss_pred             e-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceE-EEEECCCCCEEEEeeccc
Confidence            2 468899987   788899998 799999999999998764 889999999999997653

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.27  E-value=2.5e-11  Score=106.29  Aligned_cols=125  Identities=17%  Similarity=0.229  Sum_probs=90.7

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCccc--ceeeeeeccccCCceeEEEEeeecCcee----------ec
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVTE----------YT  218 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  218 (291)
                      ..++.||.+.|+|++++.+||+++|||++..+.....+  ......++.+    ...++|..+..+..          ..
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHh
Confidence            36799999999999999999999999998875322111  1234444432    35677765422111          11


Q ss_pred             cCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccC-CC-CceEEEEECCCCceEEEecchh
Q 022840          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP-GL-NTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       219 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~-~~-~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      .++|+.|++|.|+|++++++++    +++|+++..+|.... .. ..+.+.++||+|+.++|+++..
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~  158 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  158 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCC
Confidence            2578999999999999999999    999999998775421 11 1257889999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.24  E-value=6.1e-10  Score=85.70  Aligned_cols=123  Identities=16%  Similarity=0.094  Sum_probs=85.0

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC--------------CCCeeEEEeccCCCCcceEEEEeecCCC
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGFGPEQSYFVVELTYNYGV   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~l~~~~~~~~   84 (291)
                      ||++.-....|.++|.++|.+||+++||++++......              ++....+.|.++.  .  .|.+....+.
T Consensus        21 ~mmm~~i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g--~--~lm~~D~~g~   96 (172)
T 3l20_A           21 MFYMTALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLG--V--KVLCSDSFGR   96 (172)
T ss_dssp             CCCCCEEEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETT--E--EEEEEECTTC
T ss_pred             eEecCcEEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECC--E--EEEEECCCCC
Confidence            34554467778888999999999999999977543321              2334555566542  2  2333332121


Q ss_pred             CcccCCCCceEEEEEE--------CCHHHHHHHHHHcC-CeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           85 TSYDIGTGFGHLAIAT--------EDVYKMVENIRAKG-GNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 ~~~~~~~g~~~i~~~v--------~d~~~~~~~l~~~G-~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                       ....+ ....+++.+        +|+++++++|.++| +++..++...+||.+. .+|+||+|+.|.|...+
T Consensus        97 -~~~~~-~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~-g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           97 -ADKIN-NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKM-GVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -CCCCC-SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEE-EEEECTTSCEEEEEEEC
T ss_pred             -CCCCC-CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEE-EEEECCCCCEEEEEeCC
Confidence             11122 223566666        58999999999999 7999999999998764 78999999999998654

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.22  E-value=9.4e-11  Score=101.78  Aligned_cols=129  Identities=12%  Similarity=0.123  Sum_probs=85.6

Q ss_pred             CCCceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeecCC--CCeeEEEeccCCCCcceEEEEeec-CCC-Cc-----
Q 022840           18 KKDKRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYN-YGV-TS-----   86 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~-~~~-~~-----   86 (291)
                      ...+++|+||++.|+  |++++.+||+++|||++........  .+....++....+  ...+++... ... ..     
T Consensus       153 ~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g--~~~i~L~~~~~~~~~~~~~~~  230 (357)
T 1cjx_A          153 GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDG--MIRIPLNEESSKGAGQIEEFL  230 (357)
T ss_dssp             TTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTS--SCEEEEEEECTTCCSHHHHHH
T ss_pred             CCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCC--CEEEEEeeecCCCCChHHHhH
Confidence            357899999999999  9999999999999999876543222  1111222222222  234555544 211 11     


Q ss_pred             -ccCCCCceEEEEEECCHHHHHHHHHHcCCeeec-CCcc---------CCCCce-------EEEEEEC----CCCcEEEE
Q 022840           87 -YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTR-EPGP---------LKGMTT-------HFAFVKD----PDGYIFEL  144 (291)
Q Consensus        87 -~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~-~~~~---------~~~g~~-------~~~~~~D----P~G~~iel  144 (291)
                       ...+.|++||||.|+|+++++++|+++|+++.. .|..         ...+..       ..++-+|    |+|++++|
T Consensus       231 ~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqi  310 (357)
T 1cjx_A          231 MQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQI  310 (357)
T ss_dssp             HHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEE
T ss_pred             HhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEE
Confidence             114568999999999999999999999999876 5411         111111       0245577    88888888


Q ss_pred             EEcC
Q 022840          145 IQRG  148 (291)
Q Consensus       145 ~~~~  148 (291)
                      +..+
T Consensus       311 ft~~  314 (357)
T 1cjx_A          311 FSET  314 (357)
T ss_dssp             EBCC
T ss_pred             eccC
Confidence            8654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.17  E-value=1.3e-10  Score=102.88  Aligned_cols=124  Identities=15%  Similarity=0.104  Sum_probs=89.3

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCccc--ceeeeeeccccCCceeEEEEeeecCce--------------
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVT--------------  215 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------  215 (291)
                      .++.||.+.|+|++++.+||++.|||++..+.....+  .+..+.+..+    ...+.|..+..+.              
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCccccccccccccccc
Confidence            3589999999999999999999999998766432211  2333444422    4566666542211              


Q ss_pred             -----e------eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          216 -----E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 -----~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                           .      ...+.|+.|++|.|+|++++++++    +++|+++...|....+ ..+...+++|+|+.++|+++...
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                 0      123468999999999999999999    9999999988865432 24567778888888888876543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.14  E-value=8.6e-10  Score=96.14  Aligned_cols=104  Identities=20%  Similarity=0.269  Sum_probs=75.2

Q ss_pred             CCCCceeEEEEEEEeCC--HHHHHHHHHHhcCCEEeeEee---c--CCCCeeEEEeccCCCCcceEEEEeecCC--CCc-
Q 022840           17 PKKDKRRFLHAVYRVGD--LDRTIKYYTECFGMELLRKRD---V--PEEKYSNAFLGFGPEQSYFVVELTYNYG--VTS-   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D--~~~~~~FY~~~lG~~~~~~~~---~--~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~-   86 (291)
                      +...+.+|+||++.|+|  ++++.+||+++|||+......   .  +..+.+...+....+  .+.|++..+..  ..+ 
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g--~v~i~L~ep~~~~~~s~  244 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEE--SIKMPINEPAPGKKKSQ  244 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTS--SCEEEEEEEECCSBCCH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCC--CEEEEEecCCCCCCCCH
Confidence            44578999999999998  999999999999999876532   1  112344445543332  34555554432  111 


Q ss_pred             ------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCc
Q 022840           87 ------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        87 ------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                            ...|.|++||||.|+|+.+++++|+++|+++...|.
T Consensus       245 I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          245 IQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             HHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             HHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence                  124789999999999999999999999999876553

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.08  E-value=1.4e-09  Score=81.18  Aligned_cols=115  Identities=10%  Similarity=0.072  Sum_probs=71.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhc-CCeeeeeccCc------ccceeeeeeccccCCceeEEEEeeecCceeeccCcceeE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKAL-GMKLLRTIDSP------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h  225 (291)
                      ++...-+.+.|.+++.+||+++| |+++.......      ++.+....+..+    +..+-+... .+ ..  +.. ..
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~----~~~~m~~d~-~~-~~--~~~-~s   75 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDA-NS-GT--ELP-IS   75 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC-----------C-CC
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC----CEEEEEECC-CC-CC--Cce-EE
Confidence            34444444459999999999999 99986432111      122222223322    112211111 11 01  112 56


Q ss_pred             EEEEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          226 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 i~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      +++.|+|   +++++++|    . .|+++..+|...++ +.++.+++||+|+.|+|....
T Consensus        76 l~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           76 LFVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             EEEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHH----h-CCCEEeecccccCC-CceEEEEECCCCCEEEEeecc
Confidence            8888987   45555555    7 79999999998887 568999999999999998743

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.07  E-value=6.7e-09  Score=77.24  Aligned_cols=114  Identities=13%  Similarity=0.203  Sum_probs=77.7

Q ss_pred             EEEEEeC-CHHHHHHHHHHhcC-CEEeeEeec------CCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           26 HAVYRVG-DLDRTIKYYTECFG-MELLRKRDV------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        26 hv~l~v~-D~~~~~~FY~~~lG-~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ...|.++ |.+++.+||+++|| .++......      .++......|.++.  .  .+.+...........+ ....++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g--~--~lm~~d~~~~~~~~~~-~~~~l~   86 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNG--Q--EFMCIDSYVNHNFTFT-PAMSLY   86 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETT--E--EEEEEECSSCCSCCCC-TTSCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECC--E--EEEEEcCCCCCCCCCC-CCEEEE
Confidence            4556667 89999999999999 566432211      23445556666542  2  2333321111111122 235689


Q ss_pred             EEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      +.|+|   +++++++|. +|.++..++...+||.+ +.+++||+|+.|.|..
T Consensus        87 l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~-~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           87 VTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKK-FGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEE
T ss_pred             EEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcE-EEEEECCCCCEEEEEe
Confidence            99999   999999995 68899999999999876 4889999999999875

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.07  E-value=1.8e-09  Score=95.31  Aligned_cols=103  Identities=21%  Similarity=0.325  Sum_probs=74.6

Q ss_pred             CCCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-----CCeeEEEeccCCCCcceEEEEeecCC---CCc--
Q 022840           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----EKYSNAFLGFGPEQSYFVVELTYNYG---VTS--   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~--   86 (291)
                      +...+.+|+||++.|+|++++.+||+++|||++......++     .+....++.....  .+.|++..+..   ...  
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~i~l~l~e~~~~~~~~s~i  270 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQI  270 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCC--cEEEEEeecccccCCCcch
Confidence            34568999999999999999999999999999887653322     1344556654333  34555555421   111  


Q ss_pred             --c---cCCCCceEEEEEECCHHHHHHHHHH----cCCeeecCC
Q 022840           87 --Y---DIGTGFGHLAIATEDVYKMVENIRA----KGGNVTREP  121 (291)
Q Consensus        87 --~---~~~~g~~~i~~~v~d~~~~~~~l~~----~G~~~~~~~  121 (291)
                        +   ..|.|++||||.|+|+++++++|++    +|+++...|
T Consensus       271 ~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          271 QTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence              1   2467999999999999999999999    799876543

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.06  E-value=1.7e-09  Score=80.51  Aligned_cols=114  Identities=16%  Similarity=0.137  Sum_probs=73.9

Q ss_pred             EEeeeC-CccccHHHHHHhcC-Ceeeee--cc----CcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEE
Q 022840          157 VMLRVG-DLGRSIKFYEKALG-MKLLRT--ID----SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       157 v~l~v~-D~~~~~~Fy~~~lG-~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  228 (291)
                      ..|.+. |.+++.+||+++|| .++...  ..    ...+++.-..+..+    +..+-+....+......+++ ..+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~~~-~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFTPA-MSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCCTT-SCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCCCC-EEEEE
Confidence            446666 89999999999999 565432  11    12233333333332    23343333221111222233 57999


Q ss_pred             Eecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          229 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .|+|   +++++++|    . .|+++..+|...++ +.++.+++||+|+.|+|.-.
T Consensus        88 ~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKL----A-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHH----H-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEeC
Confidence            9999   66666666    6 58899999998887 46899999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.00  E-value=6.6e-09  Score=79.91  Aligned_cols=116  Identities=15%  Similarity=0.120  Sum_probs=76.1

Q ss_pred             eEEEeeeCCccccHHHHHHhcCCeeeeeccCc--------------ccceeeeeeccccCCceeEEEEeeecCceeeccC
Q 022840          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKG  220 (291)
Q Consensus       155 ~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  220 (291)
                      ....|.+.|.+++++||+++||+++..+....              .+++.-..+..+    +..|-+....+. +...+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCC
Confidence            34557778999999999999999976543220              233333333332    233444332222 12223


Q ss_pred             cceeEEEEEe--------cchHHHHHHHHHHHHHhC-CEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          221 NAYAQVAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       221 ~g~~hi~~~v--------~d~~~~~~~l~~~~~~~G-~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      ++ ..+++.+        +|+++++++|    .+.| .++..+|...++ +.++.+++||+|+.|+|...
T Consensus       102 ~~-~sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          102 NG-ISLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             SS-EEEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEE
T ss_pred             Cc-EEEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeC
Confidence            34 3456666        4666666666    9999 699999988877 56889999999999999764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.73  E-value=1.3e-07  Score=75.70  Aligned_cols=113  Identities=19%  Similarity=0.171  Sum_probs=74.1

Q ss_pred             ceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEE---EEEe
Q 022840          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV---AIST  230 (291)
Q Consensus       154 ~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi---~~~v  230 (291)
                      .....|+|.|.++..+||+++|||++.....      ....++..+.  ...+.|-+.+... .....|.-|+   ++-|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~-~~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMR-TRKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTT-CBCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCcc-cccccccceeeeEEEEc
Confidence            3467899999999999999999999876532      3445553332  2334443422221 1234577777   5999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      ++ .+.+..+    ..++.++...   ..+.+++.+|+.||+|+.||+....+
T Consensus        82 p~-~~el~~l----L~~~~~~~~~---~~gdhgyA~yl~dPEGn~ieiyae~d  126 (244)
T 3e0r_A           82 EN-PLEIEGI----LSKTDSIHRL---YKGQNGYAFEIFSPEDDLILIHAEDD  126 (244)
T ss_dssp             SS-HHHHHHH----HTTCSCCSEE---EECSSSEEEEEECTTCCEEEEECCSC
T ss_pred             CC-HHHHHHH----Hhcccccccc---cccCCcEEEEEECCCCCeEEEEEcCC
Confidence            99 5556656    4556554321   12335788999999999999987544

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.66  E-value=2.1e-06  Score=70.93  Aligned_cols=159  Identities=13%  Similarity=0.126  Sum_probs=99.2

Q ss_pred             hhccCCCCCceeEEEEEEEeCCHHHHHHHHHHhcC-----CEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC--
Q 022840           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFG-----MELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--   84 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~D~~~~~~FY~~~lG-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--   84 (291)
                      .+..+...|+.+|+|+++.|++++        .||     |++.....-+..+.....+.++    ...||+....+.  
T Consensus        13 ~~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd----g~YLElIai~~~~~   80 (274)
T 3p8a_A           13 GLVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN----ENYIELLDVENNEK   80 (274)
T ss_dssp             --------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS----SSEEEEEEESCHHH
T ss_pred             ccccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC----CEEEEEEeecCccc
Confidence            344444568999999999999884        467     8876654444444555555553    346777653321  


Q ss_pred             ---------C--cc-------cCCCCceEEEEEECCHHHHHHHHHHcCCeeecC---CccCCCCce---EEEEEECCC--
Q 022840           85 ---------T--SY-------DIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE---PGPLKGMTT---HFAFVKDPD--  138 (291)
Q Consensus        85 ---------~--~~-------~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~---~~~~~~g~~---~~~~~~DP~--  138 (291)
                               .  .+       ..+.|+.+++++|+|+++..++|.++|+.+..+   ....++|..   ..++..|+.  
T Consensus        81 ~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~  160 (274)
T 3p8a_A           81 LKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDD  160 (274)
T ss_dssp             HHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCC
T ss_pred             ccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCcc
Confidence                     0  11       245689999999999999999999999864321   122344432   234456654  


Q ss_pred             CcEE-EEEEcC-----------CCC---CCceEEEeeeCCccccHHHHHHhcCCeeeee
Q 022840          139 GYIF-ELIQRG-----------PTP---EPLCQVMLRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       139 G~~i-el~~~~-----------~~~---~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~  182 (291)
                      +..+ -|++..           ..|   ..|..+.+.+.|++++.+.|.++||......
T Consensus       161 ~~~~PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          161 EIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SSCCCEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCCccEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            2212 223321           122   3488999999999999999999999997654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.23  E-value=2e-05  Score=59.75  Aligned_cols=131  Identities=14%  Similarity=0.148  Sum_probs=85.4

Q ss_pred             EEEEEeC-CHHHHHHHHHHhc-CCEEeeEeec-------CCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEE
Q 022840           26 HAVYRVG-DLDRTIKYYTECF-GMELLRKRDV-------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        26 hv~l~v~-D~~~~~~FY~~~l-G~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ...|..+ |.+++.+||+++| |.++......       +++......|.+++  ..  +.+... .+ ..... ....+
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g--~~--~m~~d~-~p-~~~~~-~~~sl   80 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IP--CLGLNG-GP-AFRHS-EAFSF   80 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--EE--EEEEEC-CT-TCCCC-TTEEE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC--EE--EEEECC-CC-CcCCC-CceEE
Confidence            4556666 9999999999999 9988743221       12445556666542  12  222221 11 11122 22368


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCCCCceEEEeeeCCccccHHHHHH
Q 022840           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEK  173 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~D~~~~~~Fy~~  173 (291)
                      ++.++|   +++++++|.++|.++.      .     +..++||.|+.|.|....      ..-.+.-.|.+++.+.+..
T Consensus        81 ~v~~~d~~e~d~~~~~L~~~Gg~v~------~-----~G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~a  143 (163)
T 1u69_A           81 QVATDDQAETDRLWNAIVDNGGEES------A-----CGWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEA  143 (163)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCEEC------S-----TTEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCEEE------E-----EEEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHH
Confidence            888887   7778899998898875      1     236999999999998422      1112344688999999999


Q ss_pred             hcCCeee
Q 022840          174 ALGMKLL  180 (291)
Q Consensus       174 ~lG~~~~  180 (291)
                      .|+++-.
T Consensus       144 m~~m~k~  150 (163)
T 1u69_A          144 MMTMGRI  150 (163)
T ss_dssp             HTTCSSC
T ss_pred             HHCCcce
Confidence            9998744

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.04  E-value=6.4e-05  Score=57.01  Aligned_cols=106  Identities=13%  Similarity=0.078  Sum_probs=63.5

Q ss_pred             EEeeeC-CccccHHHHHHhc-CCeeeee--ccC----c-ccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEE
Q 022840          157 VMLRVG-DLGRSIKFYEKAL-GMKLLRT--IDS----P-ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~-D~~~~~~Fy~~~l-G~~~~~~--~~~----~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  227 (291)
                      ..|.+. |.+++.+||+++| |.++...  ...    + ++++....+..+    +..+-+... .+ ..+..++ ..+.
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~----g~~~m~~d~-~p-~~~~~~~-~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNG-GP-AFRHSEA-FSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEEC-CT-TCCCCTT-EEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC----CEEEEEECC-CC-CcCCCCc-eEEE
Confidence            446666 9999999999999 9887642  211    1 233333333332    223333221 11 1222334 3688


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +.|+| .+..++++++|.+.|.++.           ++..++||.|+.|.|..+
T Consensus        82 v~~~d-~~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           82 VATDD-QAETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             EEESS-HHHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEH
T ss_pred             EEeCC-HHHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeE
Confidence            88887 3444444455487898876           234799999999999864

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.51  E-value=0.00045  Score=65.59  Aligned_cols=123  Identities=15%  Similarity=0.176  Sum_probs=76.1

Q ss_pred             CCceeEEEEEEEeC---CHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC-----------
Q 022840           19 KDKRRFLHAVYRVG---DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-----------   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~---D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-----------   84 (291)
                      +.+.+...+.+...   -.+++..||++.|++.....   .+......+|.  +......+.+......           
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (941)
T 3opy_B            5 SLFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKN---SNQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNI   79 (941)
T ss_dssp             CCSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSS---CSCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHH
T ss_pred             ceecceeEEEEEeCCHHHHHHHHHHHHhhccceeccc---cCCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHH
Confidence            45667777777664   57899999999999977542   22222244443  2233444554432100           


Q ss_pred             -------CcccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           85 -------TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        85 -------~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                             .......-..|++|.+.|++++.++|.+.+.++...|.+...  . .+|+.||+||.|+|.+...
T Consensus        80 ~~~~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~--~-e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           80 RNLTRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP--F-EVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             HCCC----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC--E-EECCSSCCEEEECC-CCSS
T ss_pred             hhhhcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC--c-eEEeECCCCCEEEEeccCC
Confidence                   001121223499999999999999999999987666554332  3 3788999999999998763

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.10  E-value=0.0009  Score=63.59  Aligned_cols=110  Identities=18%  Similarity=0.269  Sum_probs=67.9

Q ss_pred             eeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--------------------eecc
Q 022840          160 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--------------------EYTK  219 (291)
Q Consensus       160 ~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------------~~~~  219 (291)
                      ...-++++.+||++.+++......   +...-...+.  ..+...++++.......                    .+..
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~   93 (941)
T 3opy_B           19 NISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRS   93 (941)
T ss_dssp             C-CC-HHHHHHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCCC----------
T ss_pred             CHHHHHHHHHHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccccc
Confidence            345688999999999999765422   1111122232  23345666654331110                    1111


Q ss_pred             CcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       220 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                        -..|+.|.+.|++++.+.|    .+.+.++-..|...   +...+|..||.||.|+|.+.+-
T Consensus        94 --~~~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           94 --IQSNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             --CCCEEEEEESCHHHHHHHH----HTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCSS
T ss_pred             --cCceEEEEeCCHHHHHHHH----HhcCCccccCCCcC---CCceEEeECCCCCEEEEeccCC
Confidence              1139999999999999999    99988776655432   2457999999999999988654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=94.00  E-value=0.26  Score=40.41  Aligned_cols=84  Identities=11%  Similarity=0.075  Sum_probs=55.8

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcC-----CeeeeeccCcc-c-ceeeeeeccccCCceeEEEEeeecCce--------
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALG-----MKLLRTIDSPE-L-KCALAMLGYAEEDQTTVLELAYSYGVT--------  215 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG-----~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~l~~~~~~~--------  215 (291)
                      ...++|+.+.|.+++        .||     |.+......+. | .-.+..+.      +..|||+...+..        
T Consensus        22 ~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd------g~YLElIai~~~~~~~~~~~~   87 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN------ENYIELLDVENNEKLKKMAKT   87 (274)
T ss_dssp             CCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS------SSEEEEEEESCHHHHHHHTTS
T ss_pred             cccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC------CEEEEEEeecCcccccccccc
Confidence            456999999999874        356     87765432221 1 11344442      4577776533211        


Q ss_pred             --e----------eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEee
Q 022840          216 --E----------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       216 --~----------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~  252 (291)
                        +          ...++|+.++++.++|+++..+++    .+.|+...
T Consensus        88 ~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~  132 (274)
T 3p8a_A           88 IEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKL----QSEQVEVV  132 (274)
T ss_dssp             TGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHH----HTTTCEEE
T ss_pred             cCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHH----HHcCCCcC
Confidence              0          123569999999999999999999    99998754

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=90.31  E-value=3.4  Score=39.75  Aligned_cols=50  Identities=16%  Similarity=0.216  Sum_probs=35.4

Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           94 GHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ..+.|.+.|+.++.+.|.+..++  ..|.....  . .+|..||-||.+.+....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~-~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAE--IIPSKIDL--V-EFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCC--BCCCC--C--C-CEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccc--cCCCCCCc--e-eEEEecCCCCEEeeecCC
Confidence            46889999999999999987333  22222211  1 278999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-26
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-16
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-25
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-12
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-23
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	6e-11
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-16
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-16
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-12
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	5e-16
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-04
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	2e-15
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	0.001
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	8e-15
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	2e-06
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-14
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	5e-04
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	4e-14
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-04
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	6e-14
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	0.002
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	1e-13
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	3e-13
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	7e-13
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	2e-04
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-12
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-05
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	9e-11
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	2e-10
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	4e-04
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	6e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	6e-10
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	1e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.003
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	4e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-08
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.002
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	2e-08
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	2e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	3e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	3e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	0.002
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	8e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	0.003
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	1e-07
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	3e-07
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-06
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	3e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	8e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	6e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	1e-04
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	7e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 99.8 bits (247), Expect = 1e-26
 Identities = 70/132 (53%), Positives = 92/132 (69%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 72.0 bits (175), Expect = 2e-16
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 277 VLVDNEDFLKEL 288
            L++ +D  + L
Sbjct: 122 ELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 96.7 bits (239), Expect = 1e-25
 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 5/132 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           YGVTSY     +GH+AI  EDV ++V ++R     +  E           AFV DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYY 116

Query: 142 FELIQRGPTPEP 153
            EL+      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 61.2 bits (147), Expect = 2e-12
 Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           Y    AY  +AI  +DV +    +    ++    I  +          +   VDPDG+  
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDESG-----FMAFVVDPDGYYI 117

Query: 277 VLVDNEDFLKE 287
            L++ +  +++
Sbjct: 118 ELLNEKTMMEK 128

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.8 bits (224), Expect = 7e-23
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE----- 77
                + RV D  +++ +YT   GM L++K D P  K+S  FL +  +      +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 78  ----------LTYNYGVTSYD---------IGTGFGHLAIATEDVYKMVENIRAKGGNVT 118
                     LT+N+G    +            GFGH+ IA  DVY   +     G    
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 119 REPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP 151
           ++P    G     AF++DPDGY  E++      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 6e-11
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA---- 209
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++     +      
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 210 ----------------YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                  Y  GN+  +                   +ELG K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 254 QPGPIPGLNTKITSFVDPDGWKTVLV 279
           +P         +    DPDG+   ++
Sbjct: 144 KPDDGKM--KGLAFIQDPDGYWIEIL 167

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 1e-16
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 10/141 (7%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           PK ++ RFL      + VG+  +   +Y    G E L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--G 126
           FV+    N             G G   +A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKF 121

Query: 127 MTTHFAFVKDPDGYIFELIQR 147
               FA ++        L+++
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEK 142

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 71.5 bits (174), Expect = 3e-16
 Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 6/130 (4%)

Query: 23  RFLHAVYRV----GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVEL 78
            F  A  R+    G LD  I++Y E   ++ + +           F     +      + 
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQY 64

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
                       +          ++  +   ++  G        P          ++DPD
Sbjct: 65  EGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDPD 122

Query: 139 GYIFELIQRG 148
           G+    +   
Sbjct: 123 GWRIVFMNSK 132

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 61.5 bits (148), Expect = 2e-12
 Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 10/133 (7%)

Query: 154 LCQVMLRV----GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA 209
                +R+    G L   I+FYE+ L +K +           +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 210 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                      +       +  ++      +    + +G +      P         +  
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKL----KHMGYQEVESENPYWSNGG--VTIE 119

Query: 270 DPDGWKTVLVDNE 282
           DPDGW+ V ++++
Sbjct: 120 DPDGWRIVFMNSK 132

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 72.2 bits (176), Expect = 5e-16
 Identities = 29/157 (18%), Positives = 46/157 (29%), Gaps = 27/157 (17%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           PK DK   +RF H  +  GD     + ++   GM    K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIG-----------------------TGFGHLAIATEDVYKMVENI 110
           F+    Y+  +++ +I                         G   +AI  ED        
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS 122

Query: 111 RAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR 147
            A G   +  P  L       A VK     +   +  
Sbjct: 123 VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 17/127 (13%), Positives = 30/127 (23%), Gaps = 27/127 (21%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +    GD     + +   LGM+     D        A       D   +    YS  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 217 -----------------------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                   + G     VAI  +D   +  +        G   + 
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSS 131

Query: 254 QPGPIPG 260
            P  +  
Sbjct: 132 PPIVLNE 138

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 70.7 bits (172), Expect = 2e-15
 Identities = 22/151 (14%), Positives = 38/151 (25%), Gaps = 21/151 (13%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           P+ D+     F H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHLAIATEDVYKMVENIRAKGGN 116
           F+    Y +G  +                    G     +A+   D         A G  
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 117 VTREPGPLKGMTTHFAFVKDPDGYIFELIQR 147
               P  L       A V+     +   +  
Sbjct: 124 PAFGPVDLGRGFR-LAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 18/117 (15%), Positives = 27/117 (23%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L   D   +   +   LG  L    D      A A L       + +    Y++G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVT-------------QELGGKITRQPGPIPG 260
            T        A +          V  V                 G +    P  +  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 68.1 bits (165), Expect = 8e-15
 Identities = 8/134 (5%), Positives = 27/134 (20%), Gaps = 2/134 (1%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H      + +    +Y    G+  ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
             +   +Y        + +       +            +               +D +G
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

Query: 140 YIFELIQRGPTPEP 153
               L+        
Sbjct: 125 LRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 44.6 bits (104), Expect = 2e-06
 Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 6/129 (4%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR--TIDSPELKCALAMLGYAEEDQTTVLELAYSYGV 214
           + +   +   +  FY+  LG++ ++            L          T +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
             Y   NA  ++ +                +       +        N     F D +G 
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEK----FDVKHSEMTTYANRPALQFEDAEGL 125

Query: 275 KTVLVDNED 283
           + VL+ +  
Sbjct: 126 RLVLLVSNG 134

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 67.0 bits (162), Expect = 2e-14
 Identities = 19/140 (13%), Positives = 39/140 (27%), Gaps = 16/140 (11%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRK--------RDVPEEKYSNAFLGFGPEQSYF 74
           R  +    V  LD  I ++ E       R         R                   + 
Sbjct: 9   RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS 68

Query: 75  VVELTYNYGVTS-------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM 127
            +EL+      +            G+  +    ED+ +MV  +   G  +  E    +  
Sbjct: 69  RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS 128

Query: 128 TTHFAFVKDPDGYIFELIQR 147
                +++  +G +  L + 
Sbjct: 129 Y-RLCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 37.7 bits (86), Expect = 5e-04
 Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 14/129 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC---------ALAMLGYAEEDQTTVLE 207
           V + V  L  +I F+E  +G+ L    +                + +      D  + +E
Sbjct: 13  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIE 71

Query: 208 LAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGPIPGLNTK 264
           L+                 A+    V  + E ++ +   L   G ++  +       + +
Sbjct: 72  LSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYR 130

Query: 265 ITSFVDPDG 273
           +      +G
Sbjct: 131 LCYIRGVEG 139

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 66.5 bits (161), Expect = 4e-14
 Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 12/157 (7%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RF HA+    +L  T   +T+  G  L  +                  Q   +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--------VAQFLSLSTKAHDV 56

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVEN---IRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
               +       H++   E    ++     I     ++   P           +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 140 YIFELIQRGPTPEPLCQ-VMLRVGDLGRSIKFYEKAL 175
              E+   G    P  + V      LG++I ++++ L
Sbjct: 117 NRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL 153

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 14/119 (11%), Positives = 31/119 (26%), Gaps = 13/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            ++   +L  +   + K LG  L   +                      L L+       
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDEN-----------GTRVAQFLSLSTKAHDVA 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
           +       ++   +  +    +++           +   GP     T   +  F DP G
Sbjct: 58  FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 66.0 bits (160), Expect = 6e-14
 Identities = 27/136 (19%), Positives = 38/136 (27%), Gaps = 10/136 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +     V+ VG+  +   YY+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--GMTTHF 131
                           G G   LAI   D           G     EP  LK    T   
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 132 AFVKDPDGYIFELIQR 147
           A +         L+ R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 21/138 (15%), Positives = 38/138 (27%), Gaps = 14/138 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V+  VG+  ++  +Y  A GM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 217 Y--------TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 268
                      G+    +AI   D   +         E G +   +P  +   +  +   
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLA 126

Query: 269 V--DPDGWKTVLVDNEDF 284
                   +  LVD   +
Sbjct: 127 AIATYGKTRHTLVDRTGY 144

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 65.0 bits (157), Expect = 1e-13
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 12/133 (9%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV--ELTYNYG 83
           H  Y   D D   KYY E FG   L + + PE+      +    + +  +   ++     
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 84  VTS--------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV- 134
             S        ++   G  H+A   +D+  +   +R +G  +  +   L        F+ 
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH 129

Query: 135 -KDPDGYIFELIQ 146
            K   G + EL Q
Sbjct: 130 PKSGKGVLIELTQ 142

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 63.9 bits (154), Expect = 3e-13
 Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 10/140 (7%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
           P  D  R  +    V DL ++ ++Y +  G+ +  + +                    V+
Sbjct: 10  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVL 65

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKD 136
                  V ++       +   +  +V       +  G    R              V+D
Sbjct: 66  RQGPIAAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVED 119

Query: 137 PDGYIFELIQRGPTPEPLCQ 156
           P G+ +E        E L Q
Sbjct: 120 PLGFPYEFFYETEHVERLTQ 139

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 62.7 bits (151), Expect = 7e-13
 Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 9/129 (6%)

Query: 18  KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE 77
            K   R  H   RV D+ + +++Y E  G+  + + D                       
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF-------- 53

Query: 78  LTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDP 137
            +              G   +  + + ++  ++ A G  V + P             + P
Sbjct: 54  -SLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAP 112

Query: 138 DGYIFELIQ 146
            G+ FEL  
Sbjct: 113 SGHHFELYA 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 13/117 (11%), Positives = 28/117 (23%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V LRV D+ ++++ Y + LG+  +                               + +  
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDR-------------DDQGRVYLKAWTEVDKFSLVL 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                              +   +       G  + + P        +   F  P G
Sbjct: 58  READEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 61.5 bits (148), Expect = 1e-12
 Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 8/124 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-AFLGFGPEQSYFVVELTY 80
               H  + V DL+R  +     F    +   D  +   S   F   G       + +  
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAI 56

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G    +         I   D  +  E +   G ++      ++G      +  D D +
Sbjct: 57  MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 MFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 17/117 (14%), Positives = 31/117 (26%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +   V DL R  +  E     + +    S   + +L+   +       V  +        
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVY--ASDTEQFSLSREKFFLIGDIWVAIMQGEKLAER 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                A+       D   +          +LG  +      + G    I  F D D 
Sbjct: 66  SYNHIAFKIDDADFDRYAERVG-------KLGLDMRPPRPRVEGEGRSIY-FYDDDN 114

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 56.4 bits (135), Expect = 9e-11
 Identities = 23/123 (18%), Positives = 35/123 (28%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H    V DL  +I +Y +  G  L             A+L  G       + L+  
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELGSLW----LCLSRE 52

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
                           IA  D  +    +RA G    ++            +  DPDG+ 
Sbjct: 53  PQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQN----RSEGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 9/124 (7%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  H      D+ R   Y  E  G  +       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH--FAFVKDPDGY 140
            +      T   H  I       + + + A   +   E GP +   ++  + ++ DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQ------ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 141 IFEL 144
             E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
                 D+ R   + E  LG ++   I   +     A +   +          +   +T 
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTV--------HDTALTG 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
                 +     + +          +    +  +I R PG     N      +DPDG 
Sbjct: 60  GNGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 54.3 bits (129), Expect = 6e-10
 Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 11/119 (9%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DL +++ ++ E  G+           +++        +    +        V 
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEARQYVP 59

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
             +         +A ED   + + +   G  + ++            +  DPDG+  EL
Sbjct: 60  PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR 181
           + L V DL +S+ F+ + LG+ L  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHA 32

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 54.2 bits (129), Expect = 6e-10
 Identities = 19/125 (15%), Positives = 32/125 (25%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R   +  + V D+     + T+  G+      D             G             
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------------NGDLFRIDSRAWRIA 50

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT--THFAFVKDPDG 139
                 D     G+       + +M + ++  G  VT     L      T      DP G
Sbjct: 51  VQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 53.1 bits (126), Expect = 1e-09
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 14/124 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR + A     +  R   +Y +  GM +           S          +         
Sbjct: 2   RR-VVANIATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAR-------- 52

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
                   GT    L+I  ++  ++   I   G  +   P   +       F++DP G +
Sbjct: 53  ----EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVT-EAWGVQRLFLRDPFGKL 107

Query: 142 FELI 145
             ++
Sbjct: 108 INIL 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 52.8 bits (125), Expect = 1e-09
 Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V D+    ++  + FG+     R                  +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVM---------RDNDGFILTLMKGKEV 56

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
            Y      G    + E V K+ + ++  G  V            +  +V+ P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLL 180
           + L V D+  + +F EK  G+   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCS 30

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 52.4 bits (125), Expect = 4e-09
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 12/131 (9%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +        V  LD+     TE FG   + + D        A       +++  + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
            G T         HLAI      ++    E ++ +G + +   G +        + ++ +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 139 GYIFELIQRGP 149
           G +FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 50.0 bits (118), Expect = 2e-08
 Identities = 15/122 (12%), Positives = 30/122 (24%), Gaps = 8/122 (6%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
              V    D+   ++++T+  G   +   D        A +       +           
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E             ++DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHF 117

Query: 145 IQ 146
           + 
Sbjct: 118 VA 119

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 14/116 (12%), Positives = 31/116 (26%), Gaps = 12/116 (10%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY 217
           +L   D+  +++F+   LG   +   D      A  +        + V +          
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDD----FAGVVRDDVTLFISAVQDQVVPDN--TQ 62

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                     +  +     +      +     +I  QP        +  +  DP G
Sbjct: 63  AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW------GREFALRDPAG 112

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.0 bits (118), Expect = 2e-08
 Identities = 19/125 (15%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  +  + V D+     + T+  G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDG 139
                 D     G        + +M + +R  G   TR    L           ++DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 10/110 (9%)

Query: 22  RRFLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELT 79
           +   H  + V  G +     +Y + F     R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                 +  I          G  H+A  T+D+ K  + ++  G      P
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP 113

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 49.3 bits (116), Expect = 3e-08
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 4/130 (3%)

Query: 23  RFLHAVYRVGDLDRTIKYYTEC-FGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R       V D+ +++++Y +    +          E   +  +    +    V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           +   +             T  V K    +   G     +P         +A VKDPDG +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWN-AVWGQRYAIVKDPDGNV 120

Query: 142 FELIQRGPTP 151
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 13/113 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD-----VPEEKYSNAFLGFGPEQSYFVV 76
            RF H V  V +L     Y+    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
            E  +     S       +  G G  H+A+A++DV + +  ++A+      E 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEF 120

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 10/91 (10%), Positives = 31/91 (34%), Gaps = 13/91 (14%)

Query: 161 VGDLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGV 214
           V +L  +  ++    G        + ++        ++ +   +E     + E  +    
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR 76

Query: 215 T-------EYTKGNAYAQVAISTDDVYKSAE 238
                   ++  G     +A+++DDV ++  
Sbjct: 77  RSQIQTFLDHHGGPGVQHMALASDDVLRTLR 107

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 47.9 bits (113), Expect = 8e-08
 Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 12/121 (9%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
                V ++ +           +            ++ F  F       ++   +   + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADYA--------NDGFAQFTIGSHCLMLSQNHLVPLE 56

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI 145
           ++  G     + I  EDV +  + +   G  V   P      T     V+ P G + +  
Sbjct: 57  NFQSGI---IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGT-ESLLVQGPAGLVLDFY 112

Query: 146 Q 146
           +
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
           Q+ + V ++ +     E  L  K              A  G+A+    +   +     + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNHLV 53

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                 +   + I  +DV ++ + +N +  ++    T          T+      P G
Sbjct: 54  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-----GTESLLVQGPAG 106

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.6 bits (112), Expect = 1e-07
 Identities = 17/126 (13%), Positives = 34/126 (26%), Gaps = 9/126 (7%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-------AFLGFGPEQSYFVVELTY 80
           +     +   + +Y   FG         P+ K          + L      S+ V +++ 
Sbjct: 12  LVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVSS 70

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G ++           + T+D    V      G          +        V DP G 
Sbjct: 71  LPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEA-EVELGFKGKVTDPFGV 129

Query: 141 IFELIQ 146
            +   +
Sbjct: 130 TWIFAE 135

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 46.5 bits (109), Expect = 3e-07
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 20/124 (16%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
              D D T  +Y    G  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH------FAFVKDPDGYIFE 143
              +    +  +D+ +     ++ G   T    P              A + DPDG +  
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 144 LIQR 147
           LIQ 
Sbjct: 115 LIQN 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 44.3 bits (103), Expect = 1e-06
 Identities = 16/130 (12%), Positives = 29/130 (22%), Gaps = 22/130 (16%)

Query: 23  RFLHA--VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
           +FL A  V    D+   + ++ +  G E                            ++  
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR--------------DFAGVRRGDIRL 48

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT------HFAFV 134
           +   T + I        I   D   + E           +                   V
Sbjct: 49  HISRTEHQIVADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAV 108

Query: 135 KDPDGYIFEL 144
           +DP G     
Sbjct: 109 RDPAGNCVHF 118

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYF------VVELT 79
             V   G ++  + +Y +  G   +++    +     + L               + E  
Sbjct: 12  GNVEL-GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 70

Query: 80  YNYGVT------SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                +       +  G G  H+A+ T D+ + V  +RA G      P
Sbjct: 71  LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 42.8 bits (100), Expect = 8e-06
 Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H V  V D  + + +YTE  G  L    D+     ++    F            +   + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF-----LHCNGRHHTIALA 67

Query: 86  SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           ++ I     H  +     +DV    + + A G   +   G      T   +   P   I
Sbjct: 68  AFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMI 125

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 15/108 (13%), Positives = 33/108 (30%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK------YSNAFLGFGPEQSYFVVELT 79
                  +++   ++Y +          D  +         S     +       + E  
Sbjct: 30  GNQPD-QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA 88

Query: 80  YNYGVT------SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                +       Y+ G G  H+A+ TED+   + ++R +G      P
Sbjct: 89  PGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 13/102 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS------YFVVEL- 78
           HAV  V +L   + Y     G     +    +   + + L      S        + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 79  ------TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKG 114
                 +       ++ G G  HLA+ +ED+++ +  +R + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 10/122 (8%)

Query: 32  GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT 91
           G+       Y +  G  L       +            ++      +  ++ + + D   
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP 71

Query: 92  GFGH---------LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
            + +         L + ++   + + N  A+GG+V    GP       F    D  G  +
Sbjct: 72  AYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGP-TFWAASFGMFTDRFGVAW 130

Query: 143 EL 144
            +
Sbjct: 131 MV 132

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 18/138 (13%), Positives = 34/138 (24%), Gaps = 11/138 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             F    +           + E  G        V   +  N  L +   +   ++    N
Sbjct: 8   MGFEFIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPN 60

Query: 82  YGVTSY--DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
              + +  + G     +A   +D  K        G            M  +   +K   G
Sbjct: 61  SIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGG 118

Query: 140 YIFELIQRGPTPEPLCQV 157
               LI R      +  +
Sbjct: 119 APLYLIDRFGEGSSIYDI 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.83
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.82
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.81
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.78
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.78
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.78
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.75
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.75
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.75
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.75
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.74
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.74
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.73
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.73
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.73
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.72
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.72
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.72
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.71
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.71
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.71
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.71
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.71
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.7
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.7
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.7
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.69
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.69
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.69
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.67
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.66
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.65
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.65
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.64
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.64
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.64
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.64
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.62
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.61
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.59
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.59
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.58
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.57
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.57
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.56
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.53
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.5
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.48
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.47
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.4
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.4
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.39
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.36
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.3
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.28
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.27
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.19
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.18
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.17
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.05
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.02
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.02
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.01
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.01
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.95
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.74
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.73
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.68
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.25
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.19
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.53
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.96

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.5e-19  Score=133.23  Aligned_cols=129  Identities=53%  Similarity=0.966  Sum_probs=96.5

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      |||.|++|.|+|++++.+||+++|||++...............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            78999999999999999999999999998776655555444444433323333333333333333345557889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      +++++.++++++|..+..+|...+++...++||+|||||.|||++..+.
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~  129 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCc
Confidence            9999999999999998888877777666668899999999999997643

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=5.5e-20  Score=132.18  Aligned_cols=114  Identities=16%  Similarity=0.110  Sum_probs=88.2

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      |+|+|+.|.|+|++++.+||+++||+++.....    +  ...+..+.    ..|.+...........+ ...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~--~~~~~~g~----~~l~l~~~~~~~~~~~~-~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQNHLVPLENFQ-SGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESSCSSSCCCCC-SCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----C--eEEEEEcC----ceeeeeecccCCCCCCC-cceEEEEEEC
Confidence            689999999999999999999999999765422    1  44565542    23444443332222222 3357999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      |+++++++|+++|+++..+|...++|.+. ++|+|||||.|||++.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~-~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEE-EEEECCCCCEEEEEEe
Confidence            99999999999999999999888888764 8899999999999975

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.82  E-value=2.6e-19  Score=134.51  Aligned_cols=127  Identities=16%  Similarity=0.240  Sum_probs=92.5

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC-----------CCCeeEEEeccCCCCcceEEEEe-ecCCCCc
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELT-YNYGVTS   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~l~~~-~~~~~~~   86 (291)
                      ..+++|+||+|.|+|++++.+||++ |||++..+....           .......++........+.+... .......
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4689999999999999999999998 999988764322           22345556654333333322221 1211111


Q ss_pred             ----ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           87 ----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        87 ----~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                          .....|+.|++|.|+|+++++++|+++|+++..+|....++.. .+|++||+|+.|||+|.
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeE-EEEEECCCCCEEEEEEc
Confidence                1133478899999999999999999999999888877666554 48999999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=1.3e-18  Score=130.00  Aligned_cols=128  Identities=9%  Similarity=0.070  Sum_probs=91.5

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC-CeeEEEeccCCCCcceEEEEeecCCCCcccCCC-CceEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT-GFGHLA   97 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~-g~~~i~   97 (291)
                      ++.+|+||+|.|+|++++.+||+++|||++..+....+. .....+++.........+.+.......+...+. +++|++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            589999999999999999999999999999876554332 233334443333444555555544333333333 579999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      |.|+|   ++++.++|++.|+.+.. +... ++.. .+||+|||||.|||++..+.
T Consensus        83 f~v~~~~~l~~~~~~l~~~gv~~~~-~~~~-~~~~-~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          83 LLVPSEDSLHYWKERFEKFDVKHSE-MTTY-ANRP-ALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECC-SEEE-TTEE-EEEEECTTCCEEEEEECTTC
T ss_pred             EecCCchhHHHHhhhhhccceeeeC-cccc-CCeE-EEEEECCCCCEEEEEEeCCC
Confidence            99988   77788999999998743 3333 3333 58999999999999987653

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=3.6e-19  Score=131.11  Aligned_cols=133  Identities=46%  Similarity=0.797  Sum_probs=94.8

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      +++.|+.|+|+|++++.+||+++|||++..+.......................................+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            47899999999999999999999999988765444433333333332222223333323222222334457889999999


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhhh
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~  288 (291)
                      +++...+++    +++|..+...|...+..+.+++|++||||+.|||+|..+..+++
T Consensus        81 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            999999999    99999999988877776778899999999999999998877664

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.78  E-value=1.5e-18  Score=129.51  Aligned_cols=129  Identities=22%  Similarity=0.300  Sum_probs=92.5

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEecc--CCCCcceEEEEeecCCCCc--------cc
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF--GPEQSYFVVELTYNYGVTS--------YD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~~~~~~~--------~~   88 (291)
                      .|+++|+||+|.|+|++++.+||+++||+++.........+....+...  ........+++........        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            5799999999999999999999999999998876665554443433321  1112234555554332211        12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeecC-CccCCCCceEEEEE--ECCCCcEEEEEEcC
Q 022840           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTRE-PGPLKGMTTHFAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        89 ~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~DP~G~~iel~~~~  148 (291)
                      ...|+.||||.|+|+++++++|+++|+++..+ +....+|... +|+  +||+|++|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~-~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRI-NFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEE-EEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEE-EEEeccCCCCeEEEEEECC
Confidence            34579999999999999999999999997654 4444455443 444  79999999999975

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.78  E-value=5.1e-18  Score=129.27  Aligned_cols=123  Identities=16%  Similarity=0.156  Sum_probs=92.0

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |..++++||+|.|+|++++++||+++|||++..+...........++..+.......  .....      ...+..|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVA--FIHHP------EKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEE--EEECS------SSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccc--ccccC------CCCccceeEE
Confidence            567899999999999999999999999999987766555555555555433222221  11111      1236889999


Q ss_pred             EECCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           99 ATEDVY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      .+.+++   +++++|+++|+++..+|.....+...++||+|||||.|||+....
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            998755   778999999999887777665555556899999999999997754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.78  E-value=4.5e-18  Score=124.69  Aligned_cols=119  Identities=18%  Similarity=0.243  Sum_probs=84.7

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC-CeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |+.+|+||+|.|+|++++.+||+++|||++......... .....++..+    ...+.+......    ...+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEKL----AERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCCC----SSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeecccccc----cccceeeeee
Confidence            789999999999999999999999999999876544322 2334444433    233444433221    2336789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      .++  |+++++++|+++|+++..++....++.. .+||+|||||+|||...
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEE-EEEEECCCCCEEEEEEC
Confidence            774  7999999999999998766555454444 48899999999999764

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=1.2e-17  Score=124.88  Aligned_cols=117  Identities=16%  Similarity=0.176  Sum_probs=86.6

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +.+++|+||.|.|+|++++++||+++|||++......      ..++........+.+.+...       ...++.|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN------TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC------ceeeecccccccceeecccc-------CCCCCceeeE
Confidence            4589999999999999999999999999999764321      33333222222222322222       2237889999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .+.   |++++.++|+++|+++...+.....|...++||+||+||.|||+...
T Consensus        79 ~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            996   68899999999999987776666655444588999999999998754

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.75  E-value=7.6e-18  Score=123.67  Aligned_cols=114  Identities=14%  Similarity=0.146  Sum_probs=85.5

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .|++|+||+|.|+|++++++||+++|||++..+...      ..+++.+.....+.  +...       ...++.|++|.
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~------~~~l~~~~~~~~l~--l~~~-------~~~~~~h~~f~   65 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIA--VQQG-------EVDDLAFAGYE   65 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSBSCSEE--EEEC-------TTCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCCc------ceEEeecCCceEEE--EecC-------CCCCceEEEEE
Confidence            378999999999999999999999999998765331      56777654443333  3322       12378899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TE---DVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |.   +++++.++|+++|+++...+....  .+...++||+||+||.||++..+
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            95   467889999999999877664432  12223578999999999998764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.6e-18  Score=127.74  Aligned_cols=134  Identities=18%  Similarity=0.245  Sum_probs=95.1

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-----ccCCCC
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-----YDIGTG   92 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-----~~~~~g   92 (291)
                      ...+++++||+|.|+|++++.+||+++|||+++.....+.+.....++.+......+.+..........     ...+.|
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            345899999999999999999999999999998776554433223333222223333332222211111     124678


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEEEcCCCC
Q 022840           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~~~~~~~  151 (291)
                      +.||||.|+|+++++++|+++|+++..+|....+  |...+++++.|+|+.++|+|+....
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            9999999999999999999999998888766533  3334577899999999999986543

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.75  E-value=1.9e-17  Score=127.02  Aligned_cols=121  Identities=19%  Similarity=0.207  Sum_probs=83.1

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..|++|+||+|.|+|++++.+||+++|||++..+..    .. ..+.......... +.+.............+++||+|
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ce-EEEEeccCccceE-EEeccccccccccCccccceEEE
Confidence            358999999999999999999999999999986532    12 3333322222222 22222222222222336889999


Q ss_pred             EECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      .|+|   +++++++|.+.|+++. ++....+  ...+||+|||||.|||....
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEECC
Confidence            9976   7788999999999864 3333322  33479999999999999764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.75  E-value=1e-17  Score=125.67  Aligned_cols=122  Identities=15%  Similarity=0.244  Sum_probs=89.6

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc-----------ccceeeeeeccccCCceeEEEEeeec---Ccee-
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----------ELKCALAMLGYAEEDQTTVLELAYSY---GVTE-  216 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~-  216 (291)
                      .++.|++|.|+|++++.+||++ |||++..+....           .......++...+.  ...+++....   +... 
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             CEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCcccc
Confidence            4689999999999999999998 999987654321           12234555554332  3444443321   1111 


Q ss_pred             ---eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                         .....|+.|++|.|+|+++++++|    +++|+++..+|...++ +.+.+|++||+|+.|||+|+
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence               112358899999999999999999    9999999988876554 46789999999999999985

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.75  E-value=4e-18  Score=122.26  Aligned_cols=113  Identities=19%  Similarity=0.109  Sum_probs=86.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++||+++....+    .+  ..+..+    ...+.+...........+.| .+++|.|+|
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g----~~~l~l~~~~~~~~~~~~~~-~~~~f~v~D   70 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG----SHCLMLSQNHLVPLENFQSG-IIIHIEVED   70 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET----TEEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc----CceeeeeecccCCCCCCCcc-eEEEEEECC
Confidence            58899999999999999999999999765432    12  233333    34555544333221122334 579999999


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +++.++++    +++|+++..+|...++ +.+.+||+|||||.|||.|.
T Consensus        71 ~d~~~~~l----~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          71 VDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHH----HhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEe
Confidence            99999999    9999999999988776 56899999999999999985

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4e-17  Score=125.95  Aligned_cols=128  Identities=28%  Similarity=0.513  Sum_probs=92.8

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCC-----------------cceEEEEeecC
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ-----------------SYFVVELTYNY   82 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~~l~~~~~~   82 (291)
                      ...+++|++|.|+|++++++||+++|||++......+.......+...+...                 ....+......
T Consensus        20 ~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (176)
T d1qipa_          20 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT   99 (176)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecc
Confidence            4567999999999999999999999999998877776666666665432211                 01111111111


Q ss_pred             ---CCCc----ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           83 ---GVTS----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        83 ---~~~~----~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                         ....    .....|+.|+++.++|+++++++|+++|+++..+|....+..  ++||+|||||.|||+|...
T Consensus       100 ~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~--~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         100 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTT--CEEEECTTCCEEEEECTTT
T ss_pred             ccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceE--EEEEECCCCCEEEEEeCCC
Confidence               0111    112347899999999999999999999999998876644433  3689999999999999764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.74  E-value=1.6e-17  Score=126.46  Aligned_cols=123  Identities=11%  Similarity=0.109  Sum_probs=89.5

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..+++||.|.|+|++++++||+++|||++.++...........+.........  .....      ....+++.|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIH------HPEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEE------CSSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccc--ccccc------cCCCCccceeEEEE
Confidence            35799999999999999999999999999877665555444555554332211  22111      12245789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecch
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~  282 (291)
                      .+++...+. .++|++.|+++..+|..+..+..+++||+|||||.|||....
T Consensus        75 ~~~~~~~~~-~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          75 ETWEDLLRA-ADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             SCHHHHHHH-HHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             eeehhhhhH-HHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            885543322 345599999999888877665568999999999999998653

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=1.6e-17  Score=127.18  Aligned_cols=131  Identities=21%  Similarity=0.233  Sum_probs=96.4

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCC------------C
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV------------T   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~------------~   85 (291)
                      .+.+.+++||+|.|+|++++.+||+++|||++..+...+.+......+.++.....+.+........            .
T Consensus         7 ~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   86 (167)
T d1sqda1           7 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   86 (167)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccccc
Confidence            4679999999999999999999999999999987765544333333333323333333322211000            0


Q ss_pred             c-----------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840           86 S-----------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ~-----------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +           ..++.|+.||||.|+|+++++++|+++|+++..+|....++.+ +++++++++..++|+++..
T Consensus        87 ~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~-~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          87 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEEEETTEEEEEEEECC
T ss_pred             ccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEE-EEEEEccCCcEEEEEecCC
Confidence            0           0135689999999999999999999999999999988877654 5789999999999999864

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.73  E-value=1.5e-17  Score=126.81  Aligned_cols=127  Identities=22%  Similarity=0.238  Sum_probs=94.9

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCC--CeeEEEeccCCCCcceEEEEeecCCCCc----------
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS----------   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~~~~----------   86 (291)
                      ..+++|+||+|.|+|++++.+||+++|||+++........  ....+.+..+  .  ..+++........          
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~--~--~~i~l~~~~~~~~~~~~~~~~~~   78 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--S--ARFVLTSVIKPATPWGHFLADHV   78 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC--C--EEEEEeccCCCCCccccccchhh
Confidence            5689999999999999999999999999999876544333  2334444433  2  3344444322111          


Q ss_pred             ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCcEEEEEEcCC
Q 022840           87 YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        87 ~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      ...+.|+.||||+|+|+++++++|+++|+++..+|....+  |...++++++|+|..++|++...
T Consensus        79 ~~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          79 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             hcCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            1246789999999999999999999999998888766543  33446789999999999998754

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.73  E-value=2e-17  Score=121.51  Aligned_cols=113  Identities=15%  Similarity=0.148  Sum_probs=85.4

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .|++|+||+|.|+|++++++||+++|||++..+...      .+++..+.....+.+  ...       ...++.|++|.
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~~------~~~l~~~~~~~~l~~--~~~-------~~~~~~h~~f~   65 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGD------AALYRADQRAWRIAV--QPG-------ELDDLAYAGLE   65 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSBSCSEEE--EEC-------TTCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceeccccc------eeeeeeeecceeeee--ecc-------CCCCceEEEEE
Confidence            378999999999999999999999999998765331      667776544433333  222       12378999999


Q ss_pred             EC---CHHHHHHHHHHcCCeeecCCccCC---CCceEEEEEECCCCcEEEEEEcC
Q 022840          100 TE---DVYKMVENIRAKGGNVTREPGPLK---GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      |.   |++++.++|+++|+++...+....   +... ++||+||+||.|||+..+
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMG-LLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTSCEEEEEECC
T ss_pred             eccHHHHHHHHHHHHHcCCCceecCccccccCCcce-EEEEECCCCCEEEEEECC
Confidence            95   478899999999999876665432   2222 478999999999999765

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.73  E-value=7.6e-17  Score=119.61  Aligned_cols=116  Identities=18%  Similarity=0.307  Sum_probs=83.1

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |+.+|+||+|.|+|++++++||+++|||++......      ..++..+.  ....+.+...... ......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------cccccccc--ccceeeccccccc-CCCcCCccceeeee
Confidence            789999999999999999999999999999765432      33444332  2333333322221 12233467788888


Q ss_pred             E--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 T--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +  +|+++++++|+++|+++...+.   ++.. .+||+|||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~---~~~~-~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK---SEGA-SFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC---SSSE-EEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC---CCce-EEEEECCCCCEEEEEECC
Confidence            8  6799999999999999865543   3333 478999999999997643

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=2.4e-17  Score=117.65  Aligned_cols=108  Identities=19%  Similarity=0.221  Sum_probs=77.7

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      |+|+||+|.|+|++++++||+++|||++..+...   .  .+++.. +.  ...+.+......    ...+..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~--~~~~~~-~~--~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---A--FAVMRD-ND--GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---T--EEEEEC-TT--CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---c--ceeeee-cc--eeeeeeeeeecc----cccccceeeeeec
Confidence            7899999999999999999999999998765432   1  333332 22  334444443222    2236789999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          102 D---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      |   +++++++|+++|+++..++.  .++ . .+||+|||||.|||+
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~--~~~-~-~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH--AHA-Y-TFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE--C-C-E-EEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC--Cce-E-EEEEECCCCCEEEEE
Confidence            7   67789999999998765433  222 2 478999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.72  E-value=5.8e-17  Score=120.83  Aligned_cols=128  Identities=14%  Similarity=0.152  Sum_probs=86.2

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-cceeeeeeccccCCceeEEEEeeecCcee-eccCcceeEEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~  229 (291)
                      ..|+||+|.|+|++++.+||+++||+++..+....+ ......+.+.........+.+.......+ .....++.|++|.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~   84 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLL   84 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEe
Confidence            468999999999999999999999999876643322 22333334433333445555544333322 2233468999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                      |+|.++ ++.+.+++++.|+.+. .+....  +.+.+||+||||+.|||++..+
T Consensus        85 v~~~~~-l~~~~~~l~~~gv~~~-~~~~~~--~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          85 VPSEDS-LHYWKERFEKFDVKHS-EMTTYA--NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             ESCHHH-HHHHHHHHHHTTCEEC-CSEEET--TEEEEEEECTTCCEEEEEECTT
T ss_pred             cCCchh-HHHHhhhhhccceeee-CccccC--CeEEEEEECCCCCEEEEEEeCC
Confidence            998333 2333344499999874 444443  3788999999999999998654

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=9.1e-17  Score=118.24  Aligned_cols=112  Identities=21%  Similarity=0.312  Sum_probs=79.3

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |+.+|+||+|.|+|++++++||+++||+++..+...      ..++..+.    ..+.........  ....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~--~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS----LWLCLSREPQYG--GPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT----EEEEEEECTTCC--CCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC----eEEEEeeecccc--ccccccccchhc
Confidence            789999999999999999999999999998765432      44454432    223333222111  122345666666


Q ss_pred             E--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840          100 T--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +  +|+++++++|+++|+++...+.   ++.. .+||+|||||.|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~---~~~~-~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNR---SEGD-SFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCC---SSSC-EEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCC---ccee-EEEEECCCCCEEEEEEC
Confidence            5  6899999999999998765432   2223 37899999999999754

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.72  E-value=7.1e-17  Score=119.32  Aligned_cols=119  Identities=15%  Similarity=0.268  Sum_probs=85.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC---
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED---  102 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d---  102 (291)
                      .|++.|+|++++++||+++|||++..+..... .+..+++...  ...+.+.+...........+.+..|++|.|+|   
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~d   88 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLP--HADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVE   88 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESS--SSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHH
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCC--CCceeeecccccccccccccccCceEEEEeCCHHH
Confidence            35555689999999999999999877654433 3556666654  33455666555444443444567899999876   


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++..++.+.. +.. .+||+||||+.|||+....
T Consensus        89 v~~~~~~l~~~G~~~~~~~~~~~-~~~-~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          89 LAAITSKLKHMGYQEVESENPYW-SNG-GVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HHHHHHHHHHTTCCEECCSSHHH-HSS-EEEEECTTCCEEEEESSCC
T ss_pred             HHHHHHHHHHCCCeEeCCCCCCC-Cce-EEEEECCCCCEEEEEcCCC
Confidence            78889999999999886655433 333 3789999999999996653

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=6.3e-17  Score=124.01  Aligned_cols=120  Identities=15%  Similarity=0.049  Sum_probs=82.0

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      ..++||.|.|+|++++.+||+++|||++..+.+.    ...+.... +.. ...+.+.........+...+++||+|.|+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----EAIFQSIK-GEA-FGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----EEEEESST-TCS-TTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----eEEEEecc-Ccc-ceEEEeccccccccccCccccceEEEEeC
Confidence            4589999999999999999999999999876432    22333332 222 22233333222222333457899999998


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      | .+.+.++..++++.|+++. ++..+.  .++++||+|||||.|||+..
T Consensus        85 ~-~~~l~~~~~~l~~~G~~~~-~~~~~~--~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          85 N-DAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             S-HHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEE
T ss_pred             C-hHHHHHHHHHHHhcCCCcc-ccccCC--CEEEEEEECCCCcEEEEEEC
Confidence            8 4444555566699999874 444433  36789999999999999864

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.71  E-value=6.7e-17  Score=120.64  Aligned_cols=117  Identities=19%  Similarity=0.253  Sum_probs=80.5

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .|++|+||.|.|+|++++++||+++|||++..+...  ..  ...... .......+.+....       ..+..|+++.
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~   71 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GR--VYLKAW-TEVDKFSLVLREAD-------EPGMDFMGFK   71 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SC--EEEECT-TCCBSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--Cc--cceecc-cccceeeccccccC-------cccceeeeee
Confidence            389999999999999999999999999998765322  11  222222 21222222222221       1244566666


Q ss_pred             E---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          100 T---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      +   +|+++++++|+++|+++...+.....+...++||+|||||.|||+...
T Consensus        72 ~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             ehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence            5   579999999999999987666554444434589999999999998754

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.71  E-value=5.8e-17  Score=124.51  Aligned_cols=132  Identities=16%  Similarity=0.142  Sum_probs=96.5

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCc-----------
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-----------   86 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-----------   86 (291)
                      +..+++++||+|.|+|++++++||+++|||+++.......+........++.....+.+..........           
T Consensus         8 ~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (172)
T d1sp8a1           8 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA   87 (172)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcc
Confidence            467999999999999999999999999999998765554432222222222223333332222111000           


Q ss_pred             ------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           87 ------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        87 ------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                            ..++.|+.||||.|+|+++++++|+++|+++..+|....+|.+ +++++.|.+..++|++....
T Consensus        88 ~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~-~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          88 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFR-LAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEE-EEEEEEETTEEEEEEECCTT
T ss_pred             hhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEE-EEEEECCCCcEEEEEecCCC
Confidence                  0146789999999999999999999999999999887777644 58899999999999998853

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=3.5e-16  Score=115.16  Aligned_cols=122  Identities=54%  Similarity=0.916  Sum_probs=87.7

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +||.||+|.|+|++++++||+++|||++.............................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            68999999999999999999999999998776655544444444333222222222222222333334456778999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++.++++++...++++...+    ++.. ++||+|||||.|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~----~g~~-~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED----ESGF-MAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC----SSSS-EEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC----CCcE-EEEEECCCCCEEEEEECC
Confidence            99999999999999876543    3333 588999999999999864

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7.8e-17  Score=124.32  Aligned_cols=127  Identities=28%  Similarity=0.476  Sum_probs=90.3

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCC-----------------ceeEEEEeeecCc-
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED-----------------QTTVLELAYSYGV-  214 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~l~~~~~~-  214 (291)
                      +++|++|+|+|++++.+||+++|||++..+......+..+.+...+...                 ....+........ 
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD  102 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccccc
Confidence            4899999999999999999999999987665544444444444422211                 0111111111100 


Q ss_pred             --ee----eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          215 --TE----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       215 --~~----~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                        ..    .....|+.|+++.++|++++.++|    +++|+++..+|...+.  .+.+|++||||+.|||+|+..+.
T Consensus       103 ~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~~  173 (176)
T d1qipa_         103 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  173 (176)
T ss_dssp             TTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             cCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCCC
Confidence              00    112348899999999999999999    9999999998866443  56789999999999999987654

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=4.6e-17  Score=115.66  Aligned_cols=110  Identities=16%  Similarity=0.156  Sum_probs=80.2

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEEC
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +++ +..|.|+|++++++||+++|||++......      ...+..+. . ...+...... .   ..+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~-~-~~~~~~~~~~-~---~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHGW------IVTHASPL-E-AHAQVSFARE-G---GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS------EEEEEEEE-E-EEEEEEEESS-S---BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeecccc------eeEecccc-c-cceeeecccc-c---CCCCceeEEEEEec
Confidence            455 688999999999999999999998754321      22232211 1 1112111111 1   12235568999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEE
Q 022840          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~  145 (291)
                      |+++++++|+++|+++..+|...++|.+. +|++||+||.|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~-~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEE-EEEECCCCCEEEeC
Confidence            99999999999999998888888888765 78999999999986

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.70  E-value=3.7e-17  Score=121.79  Aligned_cols=127  Identities=14%  Similarity=0.157  Sum_probs=88.7

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeec--cccCCceeEEEEeeecCcee--------eccCc
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLG--YAEEDQTTVLELAYSYGVTE--------YTKGN  221 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~~~~~~--------~~~~~  221 (291)
                      .+|+||++.|+|++++.+||+++||+.+.........+.......  .........+++........        .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            568999999999999999999999999876654333222221111  11223466777766443321        11346


Q ss_pred             ceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEE--ECCCCceEEEecch
Q 022840          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       222 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~DP~G~~iel~~~~  282 (291)
                      |++|++|.|+|+++.+++|    +++|+++..++......+.+.+|+  +||+|+.|||+|.+
T Consensus        86 g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            8999999999999999999    999999876553322223344445  79999999999964

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=1.8e-17  Score=122.67  Aligned_cols=123  Identities=18%  Similarity=0.325  Sum_probs=86.5

Q ss_pred             CceEEEee----eCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEE
Q 022840          153 PLCQVMLR----VGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~----v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  228 (291)
                      .+.|+.++    |+|++++.+||+++|||++..+..... .+.+.++..++  ....+.+....+..+...+.+..|++|
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEEE
Confidence            34555544    579999999999999999877654433 35566666443  345566666555443334456789999


Q ss_pred             Eecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          229 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      .|+|   +++++++|    +++|+++..++...  .+.+.+||+||||++|||+.....
T Consensus        82 ~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          82 YVPNAVELAAITSKL----KHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             ECCCHHHHHHHHHHH----HHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             EeCCHHHHHHHHHHH----HHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            9887   45555555    99999998765432  246789999999999999986543

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.69  E-value=1.1e-16  Score=114.02  Aligned_cols=111  Identities=17%  Similarity=0.158  Sum_probs=78.2

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .+|.|+.|.|+|++++.+||+++|||++..+...     ...+...+   .+..+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDN---DGFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECT---TCCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeec---ceeeeeeeeeecc----cccccceeeeeec
Confidence            4689999999999999999999999998765432     22333322   2455555443222    2457789999998


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      |.+ .++++.++++++|+++..+|.    .+++.+||+||||+.|||+
T Consensus        70 ~~~-~v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEE-QVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCCCCEE----C-CEEEEEEETTTEEEEEE
T ss_pred             ccc-chhhhhhhHHHcCCccccCCC----CceEEEEEECCCCCEEEEE
Confidence            833 333333555999999765543    2368899999999999985

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=1.4e-16  Score=122.71  Aligned_cols=120  Identities=18%  Similarity=0.169  Sum_probs=90.3

Q ss_pred             CCCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe
Q 022840          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  230 (291)
                      ..+|+||+|.|+|++++.+|| ++|||+++++.....+.....++.....  +..+.+..       ...++++|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~-------~~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTG-------GNGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceeccc-------ccCCCccceeEEe
Confidence            457999999999999999999 7899999887766666566777775433  34444433       1245889999999


Q ss_pred             cchHHHHHHHHHHHHHhCCE--eecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          231 DDVYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      .+++...+.+ ++++++|+.  ....|.++..++..++||+||||++|||...
T Consensus        73 ~~~~~v~~~~-~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQIC-DKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHH-HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHH-HHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            9866665544 555888885  4466777666566889999999999999763

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.69  E-value=2.2e-16  Score=116.25  Aligned_cols=127  Identities=40%  Similarity=0.668  Sum_probs=89.3

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+.......................................+..++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            47899999999999999999999999998776554443333333322222222222222222222223446688999999


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhhh
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~  287 (291)
                      ++....+.+    ...+.++...+.     +.+++||+|||||.|||++..+....
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~~  128 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMMEK  128 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCCCc
Confidence            999999999    999988776542     46889999999999999997766543

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=3.9e-16  Score=120.18  Aligned_cols=120  Identities=20%  Similarity=0.231  Sum_probs=86.4

Q ss_pred             CceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEE
Q 022840           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .++||+||+|.|+|++++++|| ++|||++........+....+++..+.....  +.+...       ...+.+|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~--l~~~~~-------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHD--TALTGG-------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCS--EEEEES-------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccc--eecccc-------cCCCccceeEE
Confidence            4789999999999999999999 5799999876665555555666665433332  333322       12378999999


Q ss_pred             ECCH---HHHHHHHHHcCCee--ecCCccCCCCceEEEEEECCCCcEEEEEEcCC
Q 022840          100 TEDV---YKMVENIRAKGGNV--TREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~d~---~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~  149 (291)
                      +.++   .++.++|+++|+..  ...|.....+...++||+|||||.|||+....
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            9764   45667899999853  33444444444556899999999999987653

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.69  E-value=1.1e-16  Score=116.77  Aligned_cols=118  Identities=19%  Similarity=0.150  Sum_probs=82.8

Q ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeec------CCCCcccCCCCceE
Q 022840           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN------YGVTSYDIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~------~~~~~~~~~~g~~~   95 (291)
                      .||+|++|.|+|++++++||++ |||.+.......  .  ...+..+. .  ..+.+...      ........+.+..|
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~--~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--P--HTEAVLDG-G--IRLAWDTVETVRSYDPEWQAPTGGHRFA   72 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--S--EEEEECGG-G--CEEEEEEHHHHHHHCTTCCCCCSSCSCE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--c--ceeeeccc-e--eeeeecccccccccCCCCCCCcccccee
Confidence            3789999999999999999987 899875433322  1  33333221 2  22333221      11111122335579


Q ss_pred             EEEEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840           96 LAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++|.|.+   +++++++|+++|+++..+|...++|.+. +||+|||||.|||++.-
T Consensus        73 l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~-~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          73 IAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEE-EEEECTTSCEEEEEEEC
T ss_pred             EeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEE-EEEECCCCCEEEEEecC
Confidence            9999986   6778999999999999999888887664 89999999999998753

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.67  E-value=2.1e-16  Score=118.11  Aligned_cols=117  Identities=20%  Similarity=0.192  Sum_probs=84.1

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .+|+|+.+.|+|++++.+||+++|||++..+...     ...+... +......+.+..       ...+++.|++|.+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~-------~~~~~~~h~~~~~~   81 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN-----TIYLRSL-EEFIHHNLVLRQ-------GPIAAVAAFAYRVK   81 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS-----EEEEECT-TCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC-----ceeeecc-cccccceeeccc-------cCCCCCceeeEeec
Confidence            4589999999999999999999999998876432     1222222 222233333322       12458899999997


Q ss_pred             c---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                      +   ++++.++|    +++|+++...+.....+.++++||+||+|+.|||....+..
T Consensus        82 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~  134 (146)
T d1f1ua1          82 SPAEVDAAEAYY----KELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHV  134 (146)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCC
T ss_pred             cchhHHHHHHHH----HHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecccc
Confidence            5   45555555    99999998888776665568899999999999998754443

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.66  E-value=5.7e-16  Score=116.86  Aligned_cols=119  Identities=14%  Similarity=0.112  Sum_probs=84.7

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc---ccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  228 (291)
                      ..|.|+.|.|+|++++.+||+++|||+++++...+   .......++.....  +..+....      .+..++++|++|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~------~~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAA------FPIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEEC------CSCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeecc------CCCCCceeEEEE
Confidence            46899999999999999999999999988764322   12234455554433  33333322      122458999999


Q ss_pred             EecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCc-eEEEec
Q 022840          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVD  280 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~-~iel~~  280 (291)
                      .|++++++.+.. ++|+++|+.+ ..|.++......++|++||+|+ .+|+.-
T Consensus        81 ~v~~~ddv~~~~-d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          81 QANTIDDVGYAF-DRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             EBSSHHHHHHHH-HHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             ECCCHHHHHHHH-HHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            999866655444 6669999865 5677776555789999999998 589854

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.65  E-value=6.2e-16  Score=113.02  Aligned_cols=116  Identities=18%  Similarity=0.213  Sum_probs=80.4

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCccc-ceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .|.|++|.|+|++++.+||+++|||++..+...... .....++..+    +..+.+.....    ....+..|++|.++
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeeccc
Confidence            489999999999999999999999998776543321 1223333322    34444443222    12456789999775


Q ss_pred             --chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                        |++++++++    +++|+++..++....+ +++.+||+|||||.|||...
T Consensus        76 ~~dv~~~~~~l----~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          76 DADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             GGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHHH----HHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEEC
Confidence              677777777    9999998776654333 46889999999999999764

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.65  E-value=1.3e-15  Score=107.99  Aligned_cols=107  Identities=14%  Similarity=0.094  Sum_probs=78.6

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHH
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  235 (291)
                      +..|.|+|++++.+||+++|||++....+.    + ..+.. +.  ....+..... .   ...+.+..|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~----~-~~~~~-~~--~~~~~~~~~~-~---~~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHGW----I-VTHAS-PL--EAHAQVSFAR-E---GGSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECSS----E-EEEEE-EE--EEEEEEEEES-S---SBTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecccc----e-eEecc-cc--ccceeeeccc-c---cCCCCceeEEEEEecCHHH
Confidence            577999999999999999999998765431    2 22222 11  1111111111 1   1123456799999999999


Q ss_pred             HHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      .++++    +++|+++..+|...++ +.+.+|++||+||.||++
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            99999    9999999999987776 568999999999999986

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.3e-16  Score=118.30  Aligned_cols=128  Identities=17%  Similarity=0.192  Sum_probs=92.5

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--e-----eccCcceeE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--E-----YTKGNAYAQ  225 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~g~~h  225 (291)
                      .++||++.|+|++++.+||+++|||++..+.....+......+....  ....+.+.......  +     ...+.|++|
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~h   88 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ--GKIVFVLCSALNPWNKEMGDHLVKHGDGVKD   88 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE--TTEEEEEEEESSTTCHHHHHHHHHHCSEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC--CcEEEEEEeccCCCCchhhhhhhhCCCeEEE
Confidence            48899999999999999999999999876654433322222222212  23455554433221  1     124679999


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCc--eEEEEECCCCceEEEecchhhhh
Q 022840          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNT--KITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       226 i~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~--~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                      ++|.|+|+++++++|    +++|+++..+|.......+  ++++++.|+|..++|+|+..+..
T Consensus        89 iaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g  147 (149)
T d1sqia1          89 IAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTG  147 (149)
T ss_dssp             EEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCS
T ss_pred             EEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcC
Confidence            999999999999999    9999999999876433233  46788999899999999887654

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.64  E-value=7.3e-16  Score=112.86  Aligned_cols=109  Identities=17%  Similarity=0.171  Sum_probs=79.7

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      .|.||.|.|+|++++.+||+++|||++..+..      ...+++.++.  +..+.+..       ...+++.|++|.|.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~-------~~~~~~~h~~f~v~~   68 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQ-------GEVDDLAFAGYEVAD   68 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEESS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEec-------CCCCCceEEEEEEcc
Confidence            48999999999999999999999999886532      2344554443  33444433       124588999999976


Q ss_pred             ---hHHHHHHHHHHHHHhCCEeecCCcccC--CCCceEEEEECCCCceEEEec
Q 022840          233 ---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DP~G~~iel~~  280 (291)
                         ++++.++|    +++|+++...|....  ....+.+||+||+||.||++-
T Consensus        69 ~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          69 AAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             HHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHH----HHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence               44445555    999999988875421  123578999999999999975

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.64  E-value=3.1e-16  Score=116.94  Aligned_cols=116  Identities=17%  Similarity=0.190  Sum_probs=79.5

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe-
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v-  230 (291)
                      .+|.||.|.|+|++++.+||+++|||++..+.....     .............+.+...       ..++..|+++.+ 
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~   73 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLREA-------DEPGMDFMGFKVV   73 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             cEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeecccccc-------Ccccceeeeeeeh
Confidence            368999999999999999999999999886643221     1111112222333333221       123555666655 


Q ss_pred             --cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchh
Q 022840          231 --DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 --~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~  283 (291)
                        +|++++.++|    +++|+++...|.....+.++.+||+||||+.|||+...+
T Consensus        74 ~~~dl~~~~~~L----~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          74 DEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             CHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             hHHHHHHHHHHH----HHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence              4566666666    999999887776554445689999999999999987544

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.64  E-value=8.1e-16  Score=112.76  Aligned_cols=114  Identities=16%  Similarity=0.116  Sum_probs=80.7

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      .+|.||.+.|+|++++.+||+++|||++..+..      ...++..++.  +..+.+..       ...+++.|++|.|.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~~~~-------~~~~~~~h~~f~v~   67 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR--AWRIAVQP-------GELDDLAYAGLEVD   67 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec--ceeeeeec-------cCCCCceEEEEEec
Confidence            468999999999999999999999999876542      2345555443  33344332       12458899999997


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCC--CCceEEEEECCCCceEEEecc
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +.++ ++++..+++++|+++...+.....  ...+.+||+||+||.|||+-.
T Consensus        68 ~~~d-l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          68 DAAA-LERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SHHH-HHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             cHHH-HHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            6332 233334459999999987754221  124679999999999999843

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.62  E-value=2.2e-15  Score=109.77  Aligned_cols=116  Identities=21%  Similarity=0.207  Sum_probs=79.3

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeec-----C-ceeeccCcceeEE
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-----G-VTEYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~-~~~~~~~~g~~hi  226 (291)
                      +|.|++|.|+|++++.+||++ |||.+........  +......  +   ...+.+....     . ........+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD--G---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG--G---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc--c---eeeeeecccccccccCCCCCCCccccceeE
Confidence            789999999999999999966 8998765443322  2221111  1   2333332211     1 1111122355799


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~~~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +|.|.+   ++++++++    +++|+++..+|...++ +.+.+|++|||||.|||.++
T Consensus        74 ~~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          74 AFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             EEECSSHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEE
T ss_pred             eeeeccchhhHHHHHHH----HhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEec
Confidence            999987   45556666    9999999999987765 56899999999999999874

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.61  E-value=1.5e-15  Score=115.41  Aligned_cols=126  Identities=17%  Similarity=0.231  Sum_probs=94.2

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccc--eeeeeeccccCCceeEEEEeeecCcee----------ecc
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK--CALAMLGYAEEDQTTVLELAYSYGVTE----------YTK  219 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~~  219 (291)
                      .+++||.+.|.|++++.+||+++|||++..+.......  .....++.+    ...+.+....+...          ...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhcC
Confidence            46899999999999999999999999988655433321  233444422    45566655433211          223


Q ss_pred             CcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCc--eEEEEECCCCceEEEecchhhh
Q 022840          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNT--KITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       220 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~--~~~~~~DP~G~~iel~~~~~~~  285 (291)
                      +.|+.|++|.|+|+++++++|    +++|+++..+|......++  +++++++|+|..++|+|+...+
T Consensus        82 g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~  145 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYD  145 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEEC
T ss_pred             CCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCC
Confidence            579999999999999999999    9999999999876433333  5688999999999999976543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=1.8e-15  Score=115.58  Aligned_cols=126  Identities=13%  Similarity=0.077  Sum_probs=89.5

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCce--------------e--
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--------------E--  216 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------~--  216 (291)
                      +++||++.|+|++++.+||+++|||++..+.....+............  ...+.+.......              +  
T Consensus        12 ~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~   89 (167)
T d1sqda1          12 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPSF   89 (167)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTTC
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEeccccccccccccccccccccccC
Confidence            689999999999999999999999998776544332222222211111  1222221111000              0  


Q ss_pred             ---------eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhh
Q 022840          217 ---------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       217 ---------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  285 (291)
                               ...++|+.||||.|+|+++++++|    .++|+++..+|....+ +.+.++++.+++..++|+++....
T Consensus        90 ~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1          90 DHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             CHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCCc
Confidence                     012469999999999999999999    9999999999987655 467889999999999999986543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.59  E-value=8.1e-15  Score=107.57  Aligned_cols=108  Identities=26%  Similarity=0.268  Sum_probs=75.0

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe--
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v--  230 (291)
                      .|+||+|.|+|++++.+||+++||+++..+.+.      ..++..+    ...+.........  ....+..|++|.+  
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~~--~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELG----SLWLCLSREPQYG--GPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEET----TEEEEEEECTTCC--CCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecC----CeEEEEeeecccc--ccccccccchhcccc
Confidence            589999999999999999999999998876432      1223322    2333333322221  1233455666555  


Q ss_pred             cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      +|++++.++|    +++|+++...+  .  ..++.+||+|||||.|||..
T Consensus        72 ~dl~~~~~~l----~~~G~~~~~~~--~--~~~~~~~f~DPdGn~iEl~~  113 (134)
T d1nkia_          72 ADFARFAAQL----RAHGVREWKQN--R--SEGDSFYFLDPDGHRLEAHV  113 (134)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECC--C--SSSCEEEEECTTCCEEEEES
T ss_pred             chHHHHHHHH----HHCCCcCccCC--C--cceeEEEEECCCCCEEEEEE
Confidence            6788877777    99999986543  2  23678999999999999976

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.58  E-value=1e-14  Score=107.88  Aligned_cols=113  Identities=23%  Similarity=0.300  Sum_probs=78.4

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEe-
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v-  230 (291)
                      ..++|+.|.|+|++++.+||+++|||++..+...      ..++..++  ....+.+...... ......+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------cccccccc--ccceeeccccccc-CCCcCCccceeeeech
Confidence            4589999999999999999999999998765322      22233222  1333333222211 122334667888887 


Q ss_pred             -cchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          231 -DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 -~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                       +|++++.++|    +++|+++...+.    ..++++||+||+||.|||...
T Consensus        74 ~~d~~~~~~~l----~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          74 EEDFEPLSQRL----EQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHHHHHHH----HHTTCCEEECCC----SSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHH----HHCCCeEeecCC----CCceEEEEECCCCCEEEEEEC
Confidence             5677777777    999999876543    247899999999999999764

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.57  E-value=1.6e-14  Score=108.76  Aligned_cols=119  Identities=19%  Similarity=0.195  Sum_probs=80.4

Q ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC---CCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ..+|+||+|.|+|++++.+||+++|||++......+   .......++..+.....  +.....+      ...+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~a~~~~~------~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccce--eeeccCC------CCCceeEEE
Confidence            468999999999999999999999999986543221   11223445554433322  2222211      123799999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCc-EEEEEEcC
Q 022840           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~-~iel~~~~  148 (291)
                      |+|++   +.+++++|+++|+.+. .+.....+...++|++||+|+ .+|+....
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            99976   5557899999998754 344433334446899999998 58987654

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.57  E-value=7.2e-15  Score=112.59  Aligned_cols=127  Identities=16%  Similarity=0.074  Sum_probs=91.6

Q ss_pred             CceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCc--e----------e----
Q 022840          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV--T----------E----  216 (291)
Q Consensus       153 ~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~----------~----  216 (291)
                      +++|+++.|+|++++.+||+++|||++..+.....+............  ...+.+......  .          +    
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--SLSFLFTAPYAHGADAATAALPSFSAAAAR   90 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--TEEEEEEEECCSSCCGGGCSSTTCCHHHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC--CeeeEEeeccCCCchhhhcccccCCcchhh
Confidence            689999999999999999999999998866544332222222211111  222333221110  0          0    


Q ss_pred             ---eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhhhh
Q 022840          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       217 ---~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~  286 (291)
                         ...+.|+.||+|.|+|++++++++    +++|+++..+|....+ +.++++++.|.+..++|+|+++...
T Consensus        91 ~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~~~  158 (172)
T d1sp8a1          91 RFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAA  158 (172)
T ss_dssp             HHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGG
T ss_pred             hhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCCCC
Confidence               113569999999999999999999    9999999999987655 4678999999999999999987654

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.56  E-value=5e-14  Score=101.18  Aligned_cols=106  Identities=21%  Similarity=0.285  Sum_probs=74.5

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022840           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||++ |||++.....    .  ..++..+  .  ..+.+.......+   .....++++.|+++++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~~~~~--~--~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----G--WMILQRG--D--LMLEFFAHPGLDP---LASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----S--EEEEEET--T--EEEEEEECTTCCG---GGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----c--eeeeecc--e--ecccccccccccc---CCCCcEEEEEECCHHHHH
Confidence            4999999999999998 9999876422    1  3333322  1  2233333222111   123457899999999999


Q ss_pred             HHHHHcCCeeec-------CCccCCCCceEEEEEECCCCcEEEEEEcC
Q 022840          108 ENIRAKGGNVTR-------EPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       108 ~~l~~~G~~~~~-------~~~~~~~g~~~~~~~~DP~G~~iel~~~~  148 (291)
                      ++++++|+.+..       ++...++|.+. +||+|||||+|+|+|..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~-~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEE-EEEECCCCCEEEEEEcc
Confidence            999999887643       45566677664 78999999999999863

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.53  E-value=1.8e-14  Score=107.32  Aligned_cols=121  Identities=12%  Similarity=0.061  Sum_probs=88.6

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCC--c--ccCCCCce
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--S--YDIGTGFG   94 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~--~~~~~g~~   94 (291)
                      +.+.+|+||.+.|+|++++.+||+. |||+.+.+....    ....++.+  ...  +.+.......  .  ..++.|++
T Consensus         5 ~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G--~i~--ll~~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           5 MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQG--EIN--LILNNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEET--TEE--EEEECCSSSHHHHHHHHHSSEEE
T ss_pred             CccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecC--cEE--EEecCCCCCHhHhHHhhCCCceE
Confidence            5699999999999999999999987 999998765432    24444433  333  3333222111  1  23788999


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCC
Q 022840           95 HLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~  150 (291)
                      ||||+|+|+++++++++++|++...++.. + +...+..+++|+|.++.|+++...
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~-~-g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTG-P-MELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCC-T-TCBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCC-C-CceeeeEEEcCCCCEEEEECcCCC
Confidence            99999999999999999999987665433 2 233346799999999999987654

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.50  E-value=2.5e-13  Score=97.56  Aligned_cols=105  Identities=12%  Similarity=0.049  Sum_probs=72.1

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022840           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++.....    .  ..++..+.    ..+.+.......    .....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~~~~~~----~~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----D--FAGVRRGD----IRLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEEETT----EEEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----c--eeEeeeee----eeeeeecccccc----ccceeEEEEeechhHHHH
Confidence            599999999999999999999876432    1  44555432    234444332211    113457999999999999


Q ss_pred             HHHHHcCCeeecCCcc-------CCCCceEEEEEECCCCcEEEEEEc
Q 022840          108 ENIRAKGGNVTREPGP-------LKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~-------~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +++++++......+..       ..++.+ .+||+|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGR-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEE-EEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeE-EEEEECCCCCEEEEEeC
Confidence            9999998764433211       123333 48899999999999764

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.48  E-value=1.1e-13  Score=101.41  Aligned_cols=116  Identities=13%  Similarity=0.116  Sum_probs=77.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-------CCeeEEEeccCCCCcceEEEEeec--C-CCCcccCCCCceE
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-------EKYSNAFLGFGPEQSYFVVELTYN--Y-GVTSYDIGTGFGH   95 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~l~~~~~--~-~~~~~~~~~g~~~   95 (291)
                      ++.+.+.|+++|.+||+++||+++..+...++       +......+.+++  ..  +.+...  . ............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--SS--FVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--EE--EEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECC--ee--eeccccccccccccCCCCCcceE
Confidence            45566679999999999999999876543222       122233444432  11  222221  1 1111112223358


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      |++.|+|+++++.++.++|+++..++...++|.+. ++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEE-EEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCcccccccCEE-EEEECCCCCEEEEeC
Confidence            99999999999999999999999999998888764 889999999999875

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.47  E-value=4.3e-13  Score=96.15  Aligned_cols=105  Identities=22%  Similarity=0.291  Sum_probs=73.3

Q ss_pred             EeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHH
Q 022840          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  237 (291)
                      .|.|+|++++.+||++ |||++......    .  ..+...    ...+.+.......   ......++.+.++|+++.+
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~~----~--~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDAG----W--MILQRG----DLMLEFFAHPGLD---PLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECSS----E--EEEEET----TEEEEEEECTTCC---GGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecCc----e--eeeecc----eeccccccccccc---cCCCCcEEEEEECCHHHHH
Confidence            4999999999999987 99998765321    1  122211    2333343322221   1234468999999999999


Q ss_pred             HHHHHHHHHhCCEeec-------CCcccCCCCceEEEEECCCCceEEEecc
Q 022840          238 EVVNLVTQELGGKITR-------QPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~-------~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +.+    ++.|+.+..       +|...++ +.+.+||+|||||+|||+|.
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          73 RQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             HHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEEC
T ss_pred             HHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEc
Confidence            999    887777644       4455554 56899999999999999985

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.40  E-value=7.2e-13  Score=97.02  Aligned_cols=115  Identities=12%  Similarity=0.106  Sum_probs=75.9

Q ss_pred             EEeeeCCccccHHHHHHhcCCeeeeeccCccc-------ceeeeeeccccCCceeEEEEeeec-C--ceeeccCcceeEE
Q 022840          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-------KCALAMLGYAEEDQTTVLELAYSY-G--VTEYTKGNAYAQV  226 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~l~~~~-~--~~~~~~~~g~~hi  226 (291)
                      +.+.|.|.++|.+||+++||+++..+....++       .+....+..+    +..+.+.... .  ..+.....+..++
T Consensus        11 l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (135)
T d1xy7a_          11 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVTF   86 (135)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceEE
Confidence            45667799999999999999998765543221       1112222222    1223222211 1  1111122233689


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ++.++|+++++.++    .++|+++..+|...++ +.+.++++||+|+.|+|.|
T Consensus        87 ~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          87 LLGTKDAEAAVAKA----VDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEECSCHHHHHHHH----HHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEeecCcceeEEEe----ecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            99999999999999    9999999999988777 4689999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.40  E-value=1.4e-12  Score=93.15  Aligned_cols=109  Identities=15%  Similarity=0.090  Sum_probs=73.3

Q ss_pred             EEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHH
Q 022840          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  235 (291)
                      ...|.|+|++++++||+++|||++..+.+.    +  ..+..+    ...+.+......    ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~--~~~~~~----~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD----F--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS----E--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC----e--eEEecc----cceeeccccccc----cCCCCceEEEeeccHHH
Confidence            345899999999999999999998876432    2  222322    234444332222    23455788899999888


Q ss_pred             HHHHHHHH----HHHhCCEeecCCcccCCCCceEEEEECCCCceEEEec
Q 022840          236 SAEVVNLV----TQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       236 ~~~~l~~~----~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~  280 (291)
                      ....+.+.    +...|.....++...++  ++.+||+|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            87777211    12344555556666555  689999999999999985

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.39  E-value=1.1e-12  Score=94.11  Aligned_cols=106  Identities=12%  Similarity=-0.002  Sum_probs=73.2

Q ss_pred             EeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecchHHHH
Q 022840          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  237 (291)
                      .|.|+|++++.+||+++|||++....+.    +  .++..+    +..+.+......    ...+..++.+.+.|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~~----~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDRD----F--AGVRRG----DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECSS----E--EEEEET----TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCCc----e--eEeeee----eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            4899999999999999999998755321    2  233322    345555443222    1234578999999999999


Q ss_pred             HHHHHHHHHhCCEeecCCcc------cCCCCceEEEEECCCCceEEEecc
Q 022840          238 EVVNLVTQELGGKITRQPGP------IPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~------~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +++    .+.+......+..      ....+++.+|++|||||+|||..-
T Consensus        76 ~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEW----ARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHH----HTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHH----HhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999    8877665433321      111236889999999999999763

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.36  E-value=9.1e-12  Score=88.78  Aligned_cols=106  Identities=9%  Similarity=0.005  Sum_probs=71.0

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECCHH
Q 022840           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d~~  104 (291)
                      .+..|.|+|++++++||+++|||++..+...      ..++..+.  ..  +.+.......    ..+..++.+.+.+++
T Consensus         6 ~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~------~~~~~~~~--~~--l~~~~~~~~~----~~~~~~~~~~~~~~~   71 (120)
T d1xrka_           6 AVPVLTARDVAEAVEFWTDRLGFSRVFVEDD------FAGVVRDD--VT--LFISAVQDQV----VPDNTQAWVWVRGLD   71 (120)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEECSS------EEEEEETT--EE--EEEEECSCTT----TGGGCEEEEEEECHH
T ss_pred             EEEEEEECCHHHHHHHHHHhhCCeEEEECCC------eeEEeccc--ce--eecccccccc----CCCCceEEEeeccHH
Confidence            3556999999999999999999998765321      34444332  22  3333222111    124467889999999


Q ss_pred             HHHHHHHHcCCe--------eecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840          105 KMVENIRAKGGN--------VTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       105 ~~~~~l~~~G~~--------~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      ...+++.++...        ...++...++| . .+||+|||||.|||+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          72 ELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHhhhHHhhhcccccccCceecCCE-E-EEEEECCCCCEEEEEE
Confidence            988887766544        33344444554 3 4789999999999985

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.30  E-value=9.3e-12  Score=96.90  Aligned_cols=98  Identities=16%  Similarity=0.167  Sum_probs=69.4

Q ss_pred             ceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeecCCCC--eeEEEeccCCCCcceEEEEeecCCCCc--------cc
Q 022840           21 KRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEEK--YSNAFLGFGPEQSYFVVELTYNYGVTS--------YD   88 (291)
Q Consensus        21 ~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~~~~~~~~~~--------~~   88 (291)
                      +++|+||++.|+  |++++..||+++|||+........+..  .....+.....  ...+.+........        ..
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~--~~~~~l~~~~~~~~sqi~~fl~~~   80 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDG--MIRIPLNEESSKGAGQIEEFLMQF   80 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTS--SCEEEEEEECTTCCSHHHHHHHHH
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeecccc--ccceecccCCCCCccHHHHHHHhc
Confidence            679999999998  999999999999999988766554432  22333333222  22333322221111        12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeecC
Q 022840           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTRE  120 (291)
Q Consensus        89 ~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~  120 (291)
                      .|.|++||||.|+|+.++.++|+++|+++...
T Consensus        81 ~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~  112 (203)
T d1cjxa2          81 NGEGIQHVAFLTDDLVKTWDALKKIGMRFMTA  112 (203)
T ss_dssp             TSSBCCEEEEEESCHHHHHHHHHHTTCCBCCC
T ss_pred             CCCCCceEEEEeCCHHHHHHHHHhcCCccccC
Confidence            56799999999999999999999999987654

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.1e-11  Score=94.95  Aligned_cols=107  Identities=18%  Similarity=0.236  Sum_probs=72.3

Q ss_pred             CCCCCceeEEEEEEEeCC--HHHHHHHHHHhcCCEEeeEeec-----CCCCeeEEEeccCCCCcceEEEEeecCCCCc--
Q 022840           16 WPKKDKRRFLHAVYRVGD--LDRTIKYYTECFGMELLRKRDV-----PEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--   86 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~D--~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~--   86 (291)
                      .+...+.+|+||++.|++  ++++..||+++|||+.......     +....+...+........+.+..........  
T Consensus        17 ~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi   96 (210)
T d1sqia2          17 LPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQI   96 (210)
T ss_dssp             SCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHH
T ss_pred             CCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHH
Confidence            345678999999999997  9999999999999987643221     1122344444443333333333322211111  


Q ss_pred             -----ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCc
Q 022840           87 -----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        87 -----~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                           ...|.|++||||.|+|+.+++++|+++|+++...|.
T Consensus        97 ~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          97 QEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence                 135789999999999999999999999999887664

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.27  E-value=1.1e-11  Score=91.96  Aligned_cols=118  Identities=14%  Similarity=0.082  Sum_probs=85.1

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee----eccCcceeEEE
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hi~  227 (291)
                      ..++||.+.|+|++++.+||++ |||+...+.....    ...++.+    ...+.+........    ...++|+.||+
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~G----~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQG----EINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEET----TEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEecC----cEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            3589999999999999999976 9999887654322    2223311    23333322211111    22578999999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecchhh
Q 022840          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       228 ~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~~~~  284 (291)
                      |.|+|++++++++    .++|++++..|... + ...+..++.|+|.++.|+++...
T Consensus        79 f~V~D~~~a~~~a----~~~Ga~~i~~~~~~-g-~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          79 FRVKDSQKAYNRA----LELGAQPIHIDTGP-M-ELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEESCHHHHHHHH----HHTTCCBCCCCCCT-T-CBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEeCCHHHHHHHH----HHCCCEEcccCCCC-C-ceeeeEEEcCCCCEEEEECcCCC
Confidence            9999999999999    99999988876542 2 24578899999999999997653

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.19  E-value=1.3e-10  Score=91.57  Aligned_cols=97  Identities=22%  Similarity=0.311  Sum_probs=66.7

Q ss_pred             CCCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecC-----CCCeeEEEeccCCCCcceEEEEeecC---CCCc---
Q 022840           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----EEKYSNAFLGFGPEQSYFVVELTYNY---GVTS---   86 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~l~~~~~~---~~~~---   86 (291)
                      ...+++|+||++.|+|++++.+||+++|||+........     ....+...+...++.  ..+.+....   ...+   
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~--v~~~l~E~~~~~~~~s~i~   81 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSEN--VLLPLNEPVHGTKRRSQIQ   81 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSC--CEEEEEEECCCSSSCCHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCc--cceeeeeecCCCCCccHHH
Confidence            356899999999999999999999999999987653322     123344444433333  333333321   1111   


Q ss_pred             ----ccCCCCceEEEEEECCHHHHHHHHHHcCCe
Q 022840           87 ----YDIGTGFGHLAIATEDVYKMVENIRAKGGN  116 (291)
Q Consensus        87 ----~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                          ...+.|++||||.|+|+.+++++|+++|+.
T Consensus        82 ~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          82 TFLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence                124679999999999999999999988754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.18  E-value=2.5e-11  Score=94.42  Aligned_cols=101  Identities=19%  Similarity=0.213  Sum_probs=71.3

Q ss_pred             CCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCcccceeeeeeccccCCceeEEEEeeecCcee--------eccCc
Q 022840          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--------YTKGN  221 (291)
Q Consensus       152 ~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--------~~~~~  221 (291)
                      .+|+||++.|+  |++++..||+++|||++....+..+....+........+....+.+..+.....        ...+.
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~   83 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGE   83 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSS
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCC
Confidence            36899999998  899999999999999988765433322222222222333345555544332211        22567


Q ss_pred             ceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCc
Q 022840          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       222 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      |++||||.|+|+.++++.|    +++|++++..|.
T Consensus        84 GiqHIAf~vdDI~aav~~L----~~~Gv~fL~~pp  114 (203)
T d1cjxa2          84 GIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPP  114 (203)
T ss_dssp             BCCEEEEEESCHHHHHHHH----HHTTCCBCCCCC
T ss_pred             CCceEEEEeCCHHHHHHHH----HhcCCccccCch
Confidence            9999999999999999999    999999988764

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.17  E-value=9.4e-11  Score=90.40  Aligned_cols=106  Identities=18%  Similarity=0.254  Sum_probs=73.2

Q ss_pred             CCceeEEEEEEEeC--CHHHHHHHHHHhcCCEEeeEeec-----CCCCeeEEEeccCCCCcceEEEEeecCCCCc-----
Q 022840           19 KDKRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDV-----PEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-----   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~--D~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-----   86 (291)
                      .+..+|+||++.|+  +++.+..||+++|||+.......     +........+........+.+.+.......+     
T Consensus         2 ~~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~F   81 (199)
T d1t47a2           2 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEY   81 (199)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHH
T ss_pred             CcceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhh
Confidence            45789999999998  99999999999999988654321     1223333334333333333333322221111     


Q ss_pred             --ccCCCCceEEEEEECCHHHHHHHHHHcCCeeecCCccC
Q 022840           87 --YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPL  124 (291)
Q Consensus        87 --~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~  124 (291)
                        ...|.|++||||.|+|+.++.++|+++|+++...|...
T Consensus        82 L~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~Y  121 (199)
T d1t47a2          82 LEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSY  121 (199)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGG
T ss_pred             hhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHH
Confidence              13567999999999999999999999999988776554

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.05  E-value=3.2e-10  Score=89.23  Aligned_cols=102  Identities=14%  Similarity=0.187  Sum_probs=69.0

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCc-----ccceeeeeeccccCCceeEEEEeeecCc---ee-------
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----ELKCALAMLGYAEEDQTTVLELAYSYGV---TE-------  216 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~-------  216 (291)
                      .+++||++.|+|++++..||+++|||+...+....     ........+..+  +....+.+.....+   ..       
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~--~g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN--SENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS--SSCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcC--CCccceeeeeecCCCCCccHHHHHHH
Confidence            46899999999999999999999999877654322     222333334322  33455555543221   11       


Q ss_pred             eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCC
Q 022840          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ...+.|++||||.|+|+.++++.|+++-.++|+++..+|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            124679999999999999999999444444577777766

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.02  E-value=9.7e-09  Score=74.63  Aligned_cols=113  Identities=17%  Similarity=0.134  Sum_probs=73.1

Q ss_pred             EEeC-CHHHHHHHHHHhcCCEEeeEeecCCC------------CeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceE
Q 022840           29 YRVG-DLDRTIKYYTECFGMELLRKRDVPEE------------KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        29 l~v~-D~~~~~~FY~~~lG~~~~~~~~~~~~------------~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~   95 (291)
                      |... |.++|.+||+++||+++.......+.            ......+.++.  .  .+.......... ....+..+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~--~~~~~d~~~~~~-~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--F--ALMASDNHPAYP-YEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--E--EEEEEECCTTSC-CCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcC--e--EEEecccCCccc-ccCCCcEE
Confidence            3344 99999999999999998765443331            11122233321  1  111111111111 12224567


Q ss_pred             EEEEECCHH--HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEc
Q 022840           96 LAIATEDVY--KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~--~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~  147 (291)
                      +++.+++.+  +.+.++.++|+++..++...+||.+ +.+|+||+|+.|.|...
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCCCcE-EEEEECCCCCEEEEEec
Confidence            888887655  4467777899999999999999876 48899999999998754

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.02  E-value=2.1e-09  Score=78.29  Aligned_cols=115  Identities=17%  Similarity=0.114  Sum_probs=69.8

Q ss_pred             eeeC-CccccHHHHHHhcCCeeeeeccCccc------------ceeeeeeccccCCceeEEEEeeecCceeeccCcceeE
Q 022840          159 LRVG-DLGRSIKFYEKALGMKLLRTIDSPEL------------KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ  225 (291)
Q Consensus       159 l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h  225 (291)
                      |... +.+++++||+++||+++.......+.            ++....+..+    +..+.+.......+... .+-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~~~~~-~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEG-IKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCC-CCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCcccccC-CCcEE
Confidence            3444 89999999999999998765432211            1111112211    12222222111111112 23366


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       226 i~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +++.+++.+ ..+.+.+. .++|+++..+|...++ +.++++|+||+|+.|+|...
T Consensus        83 ~~l~~~~~d-~~~~~~~~-l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKA-EAERLFNA-LAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHH-HHHHHHHH-HHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHH-HHHHHHhh-cccCceeecCccccCC-CcEEEEEECCCCCEEEEEec
Confidence            888887633 33344333 6789999999999888 46889999999999999754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.01  E-value=5.3e-10  Score=86.11  Aligned_cols=99  Identities=12%  Similarity=0.259  Sum_probs=69.8

Q ss_pred             CCceEEEeeeC--CccccHHHHHHhcCCeeeeeccCcc-----cceeeeeeccccCCceeEEEEeeecCce---------
Q 022840          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTTVLELAYSYGVT---------  215 (291)
Q Consensus       152 ~~~~~v~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~~---------  215 (291)
                      ..|+|+++.|+  +++++..||+++|||++......++     .......+.  ..+....+.+..+....         
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~--s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVA--DGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEE--CTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecc--ccccccceeecccCccccccchhhhh
Confidence            45899999998  9999999999999999776543222     111111222  22334445554322111         


Q ss_pred             eeccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCc
Q 022840          216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       216 ~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ....++|++||||.|+|+.++++++    +++|++++..|.
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p~  119 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPD  119 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCG
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCCh
Confidence            1235679999999999999999999    999999998883

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5.3e-10  Score=86.86  Aligned_cols=98  Identities=13%  Similarity=0.222  Sum_probs=67.9

Q ss_pred             CceEEEeeeCC--ccccHHHHHHhcCCeeeeeccCc-----ccceeeeeeccccCCceeEEEEeeecCce--e-------
Q 022840          153 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTIDSP-----ELKCALAMLGYAEEDQTTVLELAYSYGVT--E-------  216 (291)
Q Consensus       153 ~~~~v~l~v~D--~~~~~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-------  216 (291)
                      .|+||++.|++  ++++..||+++|||+.....+..     .+..+...+..  .+....+.+..+....  .       
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s--~~~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVAN--YEESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEEC--TTSCCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEe--cCccccccccccCCCCcccHHHHHHh
Confidence            58999999997  99999999999999876554321     11122222332  2234555554432211  1       


Q ss_pred             eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEeecCCc
Q 022840          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ...+.|++||||.|+||.+++++|    +++|++++..|.
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P~  137 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVPS  137 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCCH
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCCc
Confidence            235789999999999999999999    999999998883

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.95  E-value=4.1e-09  Score=82.98  Aligned_cols=96  Identities=22%  Similarity=0.347  Sum_probs=65.4

Q ss_pred             CCceeEEEEEEEeCCHHHHHHHHHHhcCCEEeeEeecCC-----CCeeEEEeccCCCCcceEEEEeecCCC---Cc----
Q 022840           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----EKYSNAFLGFGPEQSYFVVELTYNYGV---TS----   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~D~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~~~---~~----   86 (291)
                      ..+.+|+||++.|+|++++.+||+++||+.........+     ...+...+....+  .+.+.+.+...+   ..    
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g--~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CSEEEEEEECCC---CCHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCc--ccceeEEeecCCCCCcchHHH
Confidence            348999999999999999999999999998876543222     1223333333222  333444432111   11    


Q ss_pred             ---ccCCCCceEEEEEECCHHHHHHHHHHcCCe
Q 022840           87 ---YDIGTGFGHLAIATEDVYKMVENIRAKGGN  116 (291)
Q Consensus        87 ---~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                         ...|.|++||||.|+|+.+++++|+++|..
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence               135789999999999999999999997543

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.74  E-value=2.8e-08  Score=78.11  Aligned_cols=99  Identities=14%  Similarity=0.224  Sum_probs=66.4

Q ss_pred             CCceEEEeeeCCccccHHHHHHhcCCeeeeeccCcc-----cceeeeeeccccCCceeEEEEeeecCce---e-------
Q 022840          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTTVLELAYSYGVT---E-------  216 (291)
Q Consensus       152 ~~~~~v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~-------  216 (291)
                      .+|+||++.|+|++++.+||.++||+.........+     .......+.  ..+....+.+.+.....   .       
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~--s~~g~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLA--SNDEMVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEE--CTTSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeecccc--CCCcccceeEEeecCCCCCcchHHHHHh
Confidence            459999999999999999999999998776654322     111222222  22345556665432211   1       


Q ss_pred             eccCcceeEEEEEecchHHHHHHHHHHHHHhCCEee
Q 022840          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       217 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~~~  252 (291)
                      ...+.|++||||.|+||.+++++|+.+-..+|++++
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence            235789999999999999999999444334577766

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.73  E-value=8.9e-07  Score=63.60  Aligned_cols=115  Identities=15%  Similarity=0.186  Sum_probs=72.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeEee-------cCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEE
Q 022840           26 HAVYRVGDLDRTIKYYTECFGMELLRKRD-------VPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        26 hv~l~v~D~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ++.+.-.|.++|.+||+++||.+.+.+..       ..++.....-|.++.  ..  +.+...........+ ....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~--~~--i~~~d~~~~~~~~~~-~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--QS--VHCIDSHVRHAFDFT-PAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--EE--EEEEEESSCCSCCCC-TTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECC--EE--EEEecCCCCCCCCCC-CceEEEE
Confidence            45555569999999999999987654321       122334445555542  22  222222211111222 3356778


Q ss_pred             EECCHHHH--HHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           99 ATEDVYKM--VENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~--~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      .+++.++.  +.+..++|.++..++...++|.+ +..++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccce-EEEEECCCCCEEEEEc
Confidence            88765443  44455778899999999899876 4889999999999864

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.68  E-value=3.7e-07  Score=65.65  Aligned_cols=113  Identities=14%  Similarity=0.069  Sum_probs=67.5

Q ss_pred             eeeCCccccHHHHHHhcCCeeeeecc-------CcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEec
Q 022840          159 LRVGDLGRSIKFYEKALGMKLLRTID-------SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  231 (291)
                      +.-++.+++++||+++||.....+..       .+.+.+.-.-+..+    +..+-+.......+...+.+ ..+.+.++
T Consensus        12 f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~~~~-~s~~l~~~   86 (134)
T d1u7ia_          12 FQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFTPA-FSFFVDCE   86 (134)
T ss_dssp             EESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCCTT-EEEEEECC
T ss_pred             ECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCCCCc-eEEEEEec
Confidence            33347889999999999976543321       11222222222322    23333333222222222233 45777777


Q ss_pred             chHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEe
Q 022840          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~  279 (291)
                      + ++..+++.+. .+.|.++..++...++ +.++..++||.|+.|.|.
T Consensus        87 ~-~d~~~~~~~~-l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          87 S-NAQIERLAEA-LSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             C-HHHHHHHHHH-HHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEE
T ss_pred             c-HHHHHHHHHH-HhcCCEEecCcccccc-cceEEEEECCCCCEEEEE
Confidence            6 4444445444 5678899999988777 568899999999999986

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.25  E-value=2e-05  Score=55.83  Aligned_cols=110  Identities=15%  Similarity=0.154  Sum_probs=67.2

Q ss_pred             EEEEEeC-CHHHHHHHHHHhcCCEEeeEee-------cCCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEE
Q 022840           26 HAVYRVG-DLDRTIKYYTECFGMELLRKRD-------VPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        26 hv~l~v~-D~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ..-|..+ |.++|.+||+++||-..+....       ..++.....-|.+++  .  .+.+.......    + ....++
T Consensus         7 ~Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g--~--~~~~~d~~~~~----~-~~~s~~   77 (129)
T d1tsja_           7 TTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG--Q--VFMAIDANSGT----E-LPISLF   77 (129)
T ss_dssp             EEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT--E--EEEEEC------------CCCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECC--E--EEEeecCCCCC----C-CCEEEE
Confidence            3456665 9999999999999764433221       123344455565542  1  22222111111    0 123477


Q ss_pred             EEECCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEE
Q 022840           98 IATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~  146 (291)
                      +.+++.++   ++++| ++|.++..++...++|.+ +..+.||.|+.|.|..
T Consensus        78 v~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          78 VTVKDTIEMERLFNGL-KDEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             EECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEE
T ss_pred             eccCCHHHHHHHHHHh-ccCCEEecccccccccce-EEEEECCCCCEEEEeC
Confidence            78877665   44555 466788888888888766 4789999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.19  E-value=7.8e-06  Score=58.03  Aligned_cols=112  Identities=13%  Similarity=0.042  Sum_probs=65.0

Q ss_pred             EeeeC-CccccHHHHHHhcCCeeeeec-c------CcccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEE
Q 022840          158 MLRVG-DLGRSIKFYEKALGMKLLRTI-D------SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  229 (291)
                      .|.+. +.+++.+||+++||-..+.+. .      ..++++.-..+..+    +..+-+....+..    +.+ ..+.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~~----~~~-~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSGT----ELP-ISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC-----------C-CCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCCC----CCC-EEEEec
Confidence            45554 899999999999975433221 1      11222222222322    2333222211111    112 346777


Q ss_pred             ecchHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                      +++ .+..+++.++| +.|+++..++...++ +.++..++||.|+.|.|..+
T Consensus        80 ~~~-~~e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKD-TIEMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSS-HHHHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             cCC-HHHHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            777 44455554443 567799999888777 56789999999999999764

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.53  E-value=0.048  Score=38.95  Aligned_cols=102  Identities=11%  Similarity=-0.013  Sum_probs=57.4

Q ss_pred             eCCccccHHHHHHhcCC-eeeeec--cC-----cccceeeeeeccccCCceeEEEEeeecCceeeccCcceeEEEEEecc
Q 022840          161 VGDLGRSIKFYEKALGM-KLLRTI--DS-----PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       161 v~D~~~~~~Fy~~~lG~-~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  232 (291)
                      -.+.++|.+||.++||- .+....  +.     ..+++....+..+    +..+-....  ....+.+++ .++.+.++|
T Consensus        10 ~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD~--~~~~~~~~~-~sl~l~~d~   82 (156)
T d1u69a_          10 DSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNG--GPAFRHSEA-FSFQVATDD   82 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEEC--CTTCCCCTT-EEEEEEESS
T ss_pred             CCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeecC--CCCCCCCCC-eEEEEecCC
Confidence            36889999999999964 333221  11     1122222233322    222222221  112233445 568888888


Q ss_pred             hHHHHHHHHHHHHHhCCEeecCCcccCCCCceEEEEECCCCceEEEecc
Q 022840          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DP~G~~iel~~~  281 (291)
                       .+..+++++.|.+.| ++..     +.     ..++|+.|+.|.|+-+
T Consensus        83 -~eE~d~~f~~LsegG-~~~~-----~~-----G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          83 -QAETDRLWNAIVDNG-GEES-----AC-----GWCRDKWGISWQITPR  119 (156)
T ss_dssp             -HHHHHHHHHHHHHTT-CEEC-----ST-----TEEECTTSCEEEEEEH
T ss_pred             -HHHHHHHHHHHhccC-CCCC-----CC-----eEEECCCCCEEEeChH
Confidence             555667777767665 3322     22     3599999999999965

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.96  E-value=0.16  Score=36.13  Aligned_cols=124  Identities=13%  Similarity=0.105  Sum_probs=69.9

Q ss_pred             eCCHHHHHHHHHHhcCCEEeeEee-c-------CCCCeeEEEeccCCCCcceEEEEeecCCCCcccCCCCceEEEEEECC
Q 022840           31 VGDLDRTIKYYTECFGMELLRKRD-V-------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (291)
Q Consensus        31 v~D~~~~~~FY~~~lG~~~~~~~~-~-------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~i~~~v~d  102 (291)
                      -.|.++|.+||+++||-..+.... .       ..+......+.+++  .  .+.....  ...+..+. ..++++.++|
T Consensus        10 ~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g--~--~lm~sD~--~~~~~~~~-~~sl~l~~d~   82 (156)
T d1u69a_          10 DSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--I--PCLGLNG--GPAFRHSE-AFSFQVATDD   82 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--E--EEEEEEC--CTTCCCCT-TEEEEEEESS
T ss_pred             CCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC--e--EEEeecC--CCCCCCCC-CeEEEEecCC
Confidence            368999999999999654333211 1       12334455555542  1  2222221  11222222 3568888877


Q ss_pred             ---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCcEEEEEEcCCCCCCceEEEeeeCCccccHHHHHHhcCCe
Q 022840          103 ---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK  178 (291)
Q Consensus       103 ---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~D~~~~~~Fy~~~lG~~  178 (291)
                         ++.++++|.+.|-. .     .+.     ..+.|..|+.|.|+.+.      ..-.+...|.+++.+-++..|.+.
T Consensus        83 ~eE~d~~f~~LsegG~~-~-----~~~-----G~v~DkFGV~Wqi~~~~------~~~~~~~~~~~~~~~~~~a~~~m~  144 (156)
T d1u69a_          83 QAETDRLWNAIVDNGGE-E-----SAC-----GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAMMTMG  144 (156)
T ss_dssp             HHHHHHHHHHHHHTTCE-E-----CST-----TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHhccCCC-C-----CCC-----eEEECCCCCEEEeChHH------HHHHhcCCCHHHHHHHHHHHHcCc
Confidence               56677888776632 2     122     35999999999999542      111122345566666666666554