Citrus Sinensis ID: 022875
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 291 | ||||||
| 255554527 | 304 | inorganic pyrophosphatase, putative [Ric | 0.962 | 0.921 | 0.822 | 1e-134 | |
| 224103823 | 298 | predicted protein [Populus trichocarpa] | 0.996 | 0.973 | 0.809 | 1e-134 | |
| 363806832 | 288 | uncharacterized protein LOC100787109 [Gl | 0.979 | 0.989 | 0.792 | 1e-132 | |
| 224056325 | 296 | predicted protein [Populus trichocarpa] | 0.989 | 0.972 | 0.785 | 1e-131 | |
| 356549471 | 288 | PREDICTED: soluble inorganic pyrophospha | 0.979 | 0.989 | 0.785 | 1e-130 | |
| 449438258 | 296 | PREDICTED: soluble inorganic pyrophospha | 1.0 | 0.983 | 0.770 | 1e-130 | |
| 388505614 | 291 | unknown [Lotus japonicus] | 0.989 | 0.989 | 0.785 | 1e-130 | |
| 15242465 | 300 | soluble inorganic pyrophosphatase 1 [Ara | 0.958 | 0.93 | 0.787 | 1e-128 | |
| 21592878 | 300 | inorganic pyrophosphatase-like protein [ | 0.958 | 0.93 | 0.783 | 1e-128 | |
| 357446129 | 290 | Soluble inorganic pyrophosphatase [Medic | 0.979 | 0.982 | 0.764 | 1e-127 |
| >gi|255554527|ref|XP_002518302.1| inorganic pyrophosphatase, putative [Ricinus communis] gi|223542522|gb|EEF44062.1| inorganic pyrophosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/287 (82%), Positives = 253/287 (88%), Gaps = 7/287 (2%)
Query: 12 SCLLSKTPFALKHKSHITNLCF-GTKGVAF------PSKRLFSCRAIYNPQVQITEEGQP 64
SCLL K PF+L + ++CF G + V+ L++C AIYNP VQI EEGQP
Sbjct: 18 SCLLLKKPFSLSQNTRFNSICFNGKRQVSLFSSSSVKRSSLWTCTAIYNPDVQIREEGQP 77
Query: 65 ETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQD 124
ETLDYRVFF++NSGKKVSPWHDIPL LGDGVFNF+VEIP+ESSAKMEVATDE +TPIKQD
Sbjct: 78 ETLDYRVFFLDNSGKKVSPWHDIPLHLGDGVFNFIVEIPRESSAKMEVATDEQFTPIKQD 137
Query: 125 IKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEIL 184
KKGKLRYYPYNINWNYGL PQTWEDPS AN EVEGAFGDNDPVDVVEIGERR KIGE+L
Sbjct: 138 TKKGKLRYYPYNINWNYGLLPQTWEDPSLANHEVEGAFGDNDPVDVVEIGERRGKIGEVL 197
Query: 185 RVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIP 244
+VKPL ALAMIDEGELDWKIVAISLDDP+AALVNDVDDVEKHFPGTLTAIRDWFRDYKIP
Sbjct: 198 KVKPLGALAMIDEGELDWKIVAISLDDPRAALVNDVDDVEKHFPGTLTAIRDWFRDYKIP 257
Query: 245 DGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSLV 291
DGKPANKFGLGNKAA+KDYALKVITETNESWAKLVKRSI AGELSLV
Sbjct: 258 DGKPANKFGLGNKAANKDYALKVITETNESWAKLVKRSIPAGELSLV 304
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103823|ref|XP_002313207.1| predicted protein [Populus trichocarpa] gi|222849615|gb|EEE87162.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|363806832|ref|NP_001242545.1| uncharacterized protein LOC100787109 [Glycine max] gi|255640293|gb|ACU20436.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224056325|ref|XP_002298803.1| predicted protein [Populus trichocarpa] gi|118485996|gb|ABK94842.1| unknown [Populus trichocarpa] gi|222846061|gb|EEE83608.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356549471|ref|XP_003543117.1| PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449438258|ref|XP_004136906.1| PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Cucumis sativus] gi|449527824|ref|XP_004170909.1| PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|388505614|gb|AFK40873.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|15242465|ref|NP_196527.1| soluble inorganic pyrophosphatase 1 [Arabidopsis thaliana] gi|75264322|sp|Q9LXC9.1|IPYR1_ARATH RecName: Full=Soluble inorganic pyrophosphatase 1, chloroplastic; AltName: Full=Inorganic pyrophosphatase 1; AltName: Full=Pyrophosphate phospho-hydrolase 1; Short=PPase 1; Flags: Precursor gi|7671424|emb|CAB89365.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] gi|9758993|dbj|BAB09520.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] gi|12057177|emb|CAC19853.1| inorganic pyrophosphatase [Arabidopsis thaliana] gi|15028285|gb|AAK76619.1| putative inorganic pyrophosphatase [Arabidopsis thaliana] gi|19310711|gb|AAL85086.1| putative inorganic pyrophosphatase [Arabidopsis thaliana] gi|45331391|gb|AAS57950.1| chloroplast inorganic pyrophosphatase [Arabidopsis thaliana] gi|332004038|gb|AED91421.1| soluble inorganic pyrophosphatase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21592878|gb|AAM64828.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357446129|ref|XP_003593342.1| Soluble inorganic pyrophosphatase [Medicago truncatula] gi|217072492|gb|ACJ84606.1| unknown [Medicago truncatula] gi|355482390|gb|AES63593.1| Soluble inorganic pyrophosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 291 | ||||||
| TAIR|locus:2144766 | 300 | PPa6 "pyrophosphorylase 6" [Ar | 0.996 | 0.966 | 0.778 | 3e-124 | |
| UNIPROTKB|Q93Y52 | 280 | ppa1 "Soluble inorganic pyroph | 0.793 | 0.825 | 0.622 | 1.4e-78 | |
| UNIPROTKB|E1C6X1 | 332 | PPA2 "Uncharacterized protein" | 0.656 | 0.575 | 0.522 | 5.4e-65 | |
| UNIPROTKB|F1NT28 | 306 | PPA1 "Uncharacterized protein" | 0.793 | 0.754 | 0.502 | 1.1e-62 | |
| UNIPROTKB|F1PIJ6 | 284 | PPA1 "Uncharacterized protein" | 0.790 | 0.809 | 0.512 | 3.8e-62 | |
| UNIPROTKB|F1SUE3 | 289 | PPA1 "Uncharacterized protein" | 0.786 | 0.792 | 0.514 | 4.8e-62 | |
| UNIPROTKB|P37980 | 289 | PPA1 "Inorganic pyrophosphatas | 0.786 | 0.792 | 0.510 | 3.4e-61 | |
| UNIPROTKB|Q15181 | 289 | PPA1 "Inorganic pyrophosphatas | 0.790 | 0.795 | 0.514 | 4.3e-61 | |
| MGI|MGI:97831 | 289 | Ppa1 "pyrophosphatase (inorgan | 0.786 | 0.792 | 0.506 | 4.3e-61 | |
| RGD|1589773 | 331 | Ppa1 "pyrophosphatase (inorgan | 0.786 | 0.691 | 0.506 | 7.1e-61 |
| TAIR|locus:2144766 PPa6 "pyrophosphorylase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 228/293 (77%), Positives = 254/293 (86%)
Query: 1 MAAAKAISQTTSCLLSKTPFALKHKSH---ITNLCFGTKGVAFPSKRLFSCRAIYNPQVQ 57
+ AA A++QTTSC L+K F L K LCF + + SKR FSC AIYNPQV+
Sbjct: 7 LTAATAVTQTTSCFLAKQAFTLPAKKSCGGFGGLCFSRRALVLKSKRPFSCSAIYNPQVK 66
Query: 58 ITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDEL 117
+ EEG E+LDYRVFF++ SGKKVSPWHDIPL LGDGVFNF+VEIPKES AKMEVATDE
Sbjct: 67 VQEEGPAESLDYRVFFLDGSGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDED 126
Query: 118 YTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERR 177
+TPIKQD KKGKLRYYPYNINWNYGL PQTWEDPS ANSEVEG FGDNDPVDVVEIGE +
Sbjct: 127 FTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQ 186
Query: 178 RKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDW 237
RKIG+IL++KPL+ALAMIDEGELDWKIVAISLDDPKA LVNDV+DVEKHFPGTLTAIRDW
Sbjct: 187 RKIGDILKIKPLAALAMIDEGELDWKIVAISLDDPKAHLVNDVEDVEKHFPGTLTAIRDW 246
Query: 238 FRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSL 290
FRDYKIPDGKPAN+FGLG+K A+KDYALK+I ETNESWAKLVKRS++AG+LSL
Sbjct: 247 FRDYKIPDGKPANRFGLGDKPANKDYALKIIQETNESWAKLVKRSVDAGDLSL 299
|
|
| UNIPROTKB|Q93Y52 ppa1 "Soluble inorganic pyrophosphatase 1, chloroplastic" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C6X1 PPA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NT28 PPA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PIJ6 PPA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SUE3 PPA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P37980 PPA1 "Inorganic pyrophosphatase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q15181 PPA1 "Inorganic pyrophosphatase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:97831 Ppa1 "pyrophosphatase (inorganic) 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1589773 Ppa1 "pyrophosphatase (inorganic) 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 291 | |||
| PLN02707 | 267 | PLN02707, PLN02707, Soluble inorganic pyrophosphat | 0.0 | |
| cd00412 | 155 | cd00412, pyrophosphatase, Inorganic pyrophosphatas | 1e-63 | |
| pfam00719 | 156 | pfam00719, Pyrophosphatase, Inorganic pyrophosphat | 3e-59 | |
| COG0221 | 171 | COG0221, Ppa, Inorganic pyrophosphatase [Energy pr | 5e-39 | |
| PLN02373 | 188 | PLN02373, PLN02373, soluble inorganic pyrophosphat | 2e-20 | |
| PRK00642 | 205 | PRK00642, PRK00642, inorganic pyrophosphatase; Pro | 2e-14 | |
| PRK01250 | 176 | PRK01250, PRK01250, inorganic pyrophosphatase; Pro | 6e-13 | |
| PRK02230 | 184 | PRK02230, PRK02230, inorganic pyrophosphatase; Pro | 1e-09 |
| >gnl|CDD|178309 PLN02707, PLN02707, Soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
Score = 498 bits (1284), Expect = 0.0
Identities = 207/255 (81%), Positives = 220/255 (86%)
Query: 37 GVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVF 96
S+RLFSC + N + EEG+ ETLDYRVFF + SGKKVSPWHDIPL GDG F
Sbjct: 13 ARPPVSRRLFSCASAVNAAYAVEEEGEAETLDYRVFFSDGSGKKVSPWHDIPLHAGDGTF 72
Query: 97 NFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANS 156
NFVVEIPKE+SAKMEVATDE +TPIKQD KKGKLR YPYNINWNYGL PQTWEDP+ AN
Sbjct: 73 NFVVEIPKETSAKMEVATDEPFTPIKQDTKKGKLRDYPYNINWNYGLLPQTWEDPTHANP 132
Query: 157 EVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAAL 216
EVEGAFGDNDPVDVVEIGER KIGE+L+VKPL LAMIDEGELDWK+VAIS DDPKA+L
Sbjct: 133 EVEGAFGDNDPVDVVEIGERAAKIGEVLKVKPLGVLAMIDEGELDWKVVAISADDPKASL 192
Query: 217 VNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWA 276
VNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGL NK DKDYALKVI ETNE+WA
Sbjct: 193 VNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLDNKPMDKDYALKVIEETNEAWA 252
Query: 277 KLVKRSIEAGELSLV 291
KLVKRSI AGELSLV
Sbjct: 253 KLVKRSIPAGELSLV 267
|
Length = 267 |
| >gnl|CDD|238239 cd00412, pyrophosphatase, Inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >gnl|CDD|189686 pfam00719, Pyrophosphatase, Inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >gnl|CDD|223299 COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|178001 PLN02373, PLN02373, soluble inorganic pyrophosphatase | Back alignment and domain information |
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| >gnl|CDD|179080 PRK00642, PRK00642, inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179262 PRK01250, PRK01250, inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179388 PRK02230, PRK02230, inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 291 | |||
| PLN02707 | 267 | Soluble inorganic pyrophosphatase | 100.0 | |
| KOG1626 | 279 | consensus Inorganic pyrophosphatase/Nucleosome rem | 100.0 | |
| PRK00642 | 205 | inorganic pyrophosphatase; Provisional | 100.0 | |
| PLN02373 | 188 | soluble inorganic pyrophosphatase | 100.0 | |
| PRK01250 | 176 | inorganic pyrophosphatase; Provisional | 100.0 | |
| PF00719 | 156 | Pyrophosphatase: Inorganic pyrophosphatase; InterP | 100.0 | |
| PRK02230 | 184 | inorganic pyrophosphatase; Provisional | 100.0 | |
| cd00412 | 155 | pyrophosphatase Inorganic pyrophosphatase. These e | 100.0 | |
| COG0221 | 171 | Ppa Inorganic pyrophosphatase [Energy production a | 100.0 |
| >PLN02707 Soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-93 Score=657.56 Aligned_cols=252 Identities=82% Similarity=1.304 Sum_probs=246.0
Q ss_pred ecccccceeccccccceeEEEecCCCCcceEEEEEcCCCCccCCCCCCCCCCCCCeeEEEEEeCCCCCceEEEeccCCCC
Q 022875 40 FPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYT 119 (291)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~G~~~t~~~r~~~~~~~g~~~SpwHDIPl~~~~~~~n~VVEIPrgS~aKyEi~k~~~~n 119 (291)
..++|.++|.+++.+.|+++++|+++|++||+||++.+|+++|||||||++..+++|||||||||||++||||++++++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~G~~~t~~~r~~~~~~~g~~~spwHdIpl~~~~~~vn~VVEIPrgs~~KyEidk~~~~n 95 (267)
T PLN02707 16 PVSRRLFSCASAVNAAYAVEEEGEAETLDYRVFFSDGSGKKVSPWHDIPLHAGDGTFNFVVEIPKETSAKMEVATDEPFT 95 (267)
T ss_pred cccccceeehhhhccceeEEeecCCCCcceEEEEECCCCCccCchhcCCCCCCCCEEEEEEEECCCCceeEEECccCCCC
Confidence 35678999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred ceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCc
Q 022875 120 PIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGE 199 (291)
Q Consensus 120 pI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE 199 (291)
||+||+++|++|+||++|||||||||||||||++.+++.+|+.||||||||||||+.++.||+|++|||||+|+|||+||
T Consensus 96 pi~qD~~~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~~l~gDgDPLDVlvi~~~~~~pG~Vv~vR~IGvL~miDeGE 175 (267)
T PLN02707 96 PIKQDTKKGKLRDYPYNINWNYGLLPQTWEDPTHANPEVEGAFGDNDPVDVVEIGERAAKIGEVLKVKPLGVLAMIDEGE 175 (267)
T ss_pred CEEEeeecCceEECCCcCccccccccccccCcccccccccccCCCCCccEEEEecCCCcCCccEEEEEEeEEEEEEeCCC
Confidence 99999999999999999999999999999999999999778999999999999999999999999999999999999999
Q ss_pred cceEEEEEeCCCccccCCCCcccccccChhHHHHHHHHHHhccCCCCCcceEeecCCCCCCHHHHHHHHHHHHHHHHHHh
Q 022875 200 LDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 279 (291)
Q Consensus 200 ~DwKIIaV~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~YK~~eGK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~l~ 279 (291)
+|||||||+++||+|++|||++||++++||+|++|+|||++||.++||++|+||+++++.|+++|+++|++||++|++|+
T Consensus 176 ~D~KIIaV~~~Dp~~~~i~di~Dv~~~~pg~l~~I~~fF~~YK~~eGK~~n~~~~~~~~~~~~~A~~vI~e~~~~y~~l~ 255 (267)
T PLN02707 176 LDWKVVAISADDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLDNKPMDKDYALKVIEETNEAWAKLV 255 (267)
T ss_pred CCCEEEEEECCCCcccccCChhHhhhhhhhHHHHHHHHHHHhcCCCCCceeeccccCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCcccC
Q 022875 280 KRSIEAGELSLV 291 (291)
Q Consensus 280 ~~~~~~~~~~~~ 291 (291)
+|++++++|+++
T Consensus 256 ~~~~~~~~~~~~ 267 (267)
T PLN02707 256 KRSIPAGELSLV 267 (267)
T ss_pred ccCCCCCCcccC
Confidence 999999999875
|
|
| >KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK00642 inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >PLN02373 soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >PRK01250 inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3 | Back alignment and domain information |
|---|
| >PRK02230 inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >cd00412 pyrophosphatase Inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 291 | ||||
| 1m38_A | 287 | Structure Of Inorganic Pyrophosphatase Length = 287 | 7e-59 | ||
| 1wgi_A | 286 | Structure Of Inorganic Pyrophosphatase Length = 286 | 7e-59 | ||
| 1huk_A | 281 | Refined Structure Of Yeast Inorganic Pyrophosphatas | 8e-59 | ||
| 1huj_A | 281 | Refined Structure Of Yeast Inorganic Pyrophosphatas | 9e-59 | ||
| 8prk_A | 287 | The R78k And D117e Active Site Variants Of Saccharo | 2e-58 | ||
| 117e_A | 286 | The R78k And D117e Active Site Variants Of Saccharo | 2e-58 | ||
| 2ik6_A | 286 | Yeast Inorganic Pyrophosphatase Variant D120e With | 2e-58 | ||
| 2ik9_A | 286 | Yeast Inorganic Pyrophosphatase Variant D152e With | 2e-58 | ||
| 2ik2_A | 286 | Yeast Inorganic Pyrophosphatase Variant D115e With | 2e-58 | ||
| 2ik0_A | 286 | Yeast Inorganic Pyrophosphatase Variant E48d With M | 2e-58 | ||
| 2ik7_A | 286 | Yeast Inorganic Pyrophosphatase Variant D120n With | 2e-58 | ||
| 2ik1_A | 286 | Yeast Inorganic Pyrophosphatase Variant Y93f With M | 2e-58 | ||
| 1ypp_A | 286 | Acid Anhydride Hydrolase Length = 286 | 3e-58 | ||
| 1pyp_A | 285 | X-Ray Diffraction Study Of Inorganic Pyrophosphatas | 1e-55 | ||
| 3q46_A | 178 | Magnesium Activated Inorganic Pyrophosphatase From | 2e-12 | ||
| 3i98_A | 178 | X-Ray Crystallographic Structure Of Inorganic Pyrop | 3e-12 | ||
| 1ude_A | 195 | Crystal Structure Of The Inorganic Pyrophosphatase | 5e-12 | ||
| 1twl_A | 186 | Inorganic Pyrophosphatase From Pyrococcus Furiosus | 3e-11 | ||
| 3r6e_A | 178 | The Structure Of Thermococcus Thioreducens' Inorgan | 8e-11 | ||
| 1qez_A | 173 | Sulfolobus Acidocaldarius Inorganic Pyrophosphatase | 4e-10 | ||
| 2bqx_A | 173 | Inorganic Pyrophosphatase From The Pathogenic Bacte | 3e-09 | ||
| 3d63_A | 196 | Crystal Structure Of Inorganic Pyrophosphatase From | 1e-08 | ||
| 1ygz_A | 173 | Crystal Structure Of Inorganic Pyrophosphatase From | 6e-08 | ||
| 3lo0_A | 193 | Crystal Structure Of Inorganic Pyrophosphatase From | 8e-06 | ||
| 3fq3_A | 197 | Crystal Structure Of Inorganic Phosphatase From Bru | 9e-06 | ||
| 3ld3_A | 199 | Crystal Structure Of Inorganic Phosphatase From Ana | 5e-05 | ||
| 2uxs_A | 169 | 2.7a Crystal Structure Of Inorganic Pyrophosphatase | 9e-05 | ||
| 1sxv_A | 172 | 1.3a Crystal Structure Of Rv3628, Mycobacterium Tub | 1e-04 | ||
| 1wcf_A | 171 | 1.54 A Crystal Structure Of Rv3628, Mycobacterium T | 1e-04 | ||
| 3sw5_A | 180 | Crystal Structure Of Inorganic Pyrophosphatase From | 2e-04 |
| >pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 287 | Back alignment and structure |
|
| >pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 286 | Back alignment and structure |
| >pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 | Back alignment and structure |
| >pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 | Back alignment and structure |
| >pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 287 | Back alignment and structure |
| >pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 286 | Back alignment and structure |
| >pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|1YPP|A Chain A, Acid Anhydride Hydrolase Length = 286 | Back alignment and structure |
| >pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From Baker,S Yeast At The 3 Angstroms Resolution (Russian) Length = 285 | Back alignment and structure |
| >pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From Thermococcus Thioreducens Bound To Hydrolyzed Product At 0.99 Angstrom Resolution Length = 178 | Back alignment and structure |
| >pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic Pyrophosphatase At 298k From Archaeon Thermococcus Thioreducens Length = 178 | Back alignment and structure |
| >pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3 Length = 195 | Back alignment and structure |
| >pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus Pfu-264096-001 Length = 186 | Back alignment and structure |
| >pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic Pyrophosphatase Bound To Sulfate Length = 178 | Back alignment and structure |
| >pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An Archael Pyrophosphatase. Length = 173 | Back alignment and structure |
| >pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium Helicobacter Pylori-Kinetic And Structural Properties Length = 173 | Back alignment and structure |
| >pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Length = 196 | Back alignment and structure |
| >pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Helicobacter Pylori Length = 173 | Back alignment and structure |
| >pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Ehrlichia Chaffeensis Length = 193 | Back alignment and structure |
| >pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella Melitensis Length = 197 | Back alignment and structure |
| >pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma Phagocytophilum At 1.75a Resolution Length = 199 | Back alignment and structure |
| >pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase (rv3628) From Mycobacterium Tuberculosis At Ph 7.5 Length = 169 | Back alignment and structure |
| >pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0 Length = 172 | Back alignment and structure |
| >pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0 Length = 171 | Back alignment and structure |
| >pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Bartonella Henselae Length = 180 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 291 | |||
| 1e9g_A | 286 | Ppase, inorganic pyrophosphatase; pyrophosphate ph | 4e-96 | |
| 3q46_A | 178 | TT-ippase; inorganic pyrophosphatase, hydrolase; H | 1e-28 | |
| 1sxv_A | 172 | Inorganic pyrophosphatase; structural genomics, pp | 1e-25 | |
| 2prd_A | 174 | Pyrophosphate phosphohydrolase; 2.00A {Thermus the | 2e-25 | |
| 3gvf_A | 196 | Inorganic pyrophosphatase; structural genomics, hy | 4e-25 | |
| 2bqx_A | 173 | Inorganic pyrophosphatase; hydrolase; 1.90A {Helic | 6e-25 | |
| 3ld3_A | 199 | Inorganic pyrophosphatase; structural genomics, se | 2e-24 | |
| 1qez_A | 173 | Ppase, S-ppase, protein (inorganic pyrophosphatase | 6e-24 | |
| 3d53_A | 173 | Inorganic pyrophosphatase; seattle structural G ce | 1e-23 | |
| 2au7_A | 175 | Inorganic pyrophosphatase; hydrolase, mutant; 1.05 | 2e-23 | |
| 3fq3_A | 197 | Inorganic pyrophosphatase:bacterial/archaeal INOR | 4e-22 | |
| 3tr4_A | 178 | Inorganic pyrophosphatase; central intermediary me | 1e-21 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 7e-04 |
| >1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Length = 286 | Back alignment and structure |
|---|
Score = 284 bits (727), Expect = 4e-96
Identities = 114/243 (46%), Positives = 164/243 (67%), Gaps = 10/243 (4%)
Query: 57 QITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVAT 114
+ G TL+Y+V+ + GK VS +HDIPL + +FN VVEIP+ ++AK+E+
Sbjct: 3 TTRQIGAKNTLEYKVYIEKD-GKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITK 61
Query: 115 DELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVD 169
+E PI QD KKGKLR+ +P++ NYG FPQTWEDP+ ++ E A GDNDP+D
Sbjct: 62 EETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPET-KAVGDNDPID 120
Query: 170 VVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPG 229
V+EIGE G++ +VK L +A++DEGE DWK++AI ++DP A +ND++DVEK+FPG
Sbjct: 121 VLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPG 180
Query: 230 TLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVK-RSIEAGEL 288
L A +WFR YKIPDGKP N+F +A +K YAL +I ET++SW +L+ +S ++ +
Sbjct: 181 LLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSKGI 240
Query: 289 SLV 291
L
Sbjct: 241 DLT 243
|
| >3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Length = 178 | Back alignment and structure |
|---|
| >1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Length = 172 | Back alignment and structure |
|---|
| >2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Length = 174 | Back alignment and structure |
|---|
| >3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Length = 196 | Back alignment and structure |
|---|
| >2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Length = 173 | Back alignment and structure |
|---|
| >3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Length = 199 | Back alignment and structure |
|---|
| >1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Length = 173 | Back alignment and structure |
|---|
| >3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Length = 173 | Back alignment and structure |
|---|
| >2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Length = 175 | Back alignment and structure |
|---|
| >3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Length = 197 | Back alignment and structure |
|---|
| >3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} Length = 178 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 291 | |||
| 1e9g_A | 286 | Ppase, inorganic pyrophosphatase; pyrophosphate ph | 100.0 | |
| 3q46_A | 178 | TT-ippase; inorganic pyrophosphatase, hydrolase; H | 100.0 | |
| 2prd_A | 174 | Pyrophosphate phosphohydrolase; 2.00A {Thermus the | 100.0 | |
| 3fq3_A | 197 | Inorganic pyrophosphatase:bacterial/archaeal INOR | 100.0 | |
| 3gvf_A | 196 | Inorganic pyrophosphatase; structural genomics, hy | 100.0 | |
| 2au7_A | 175 | Inorganic pyrophosphatase; hydrolase, mutant; 1.05 | 100.0 | |
| 3ld3_A | 199 | Inorganic pyrophosphatase; structural genomics, se | 100.0 | |
| 2bqx_A | 173 | Inorganic pyrophosphatase; hydrolase; 1.90A {Helic | 100.0 | |
| 3tr4_A | 178 | Inorganic pyrophosphatase; central intermediary me | 100.0 | |
| 3d53_A | 173 | Inorganic pyrophosphatase; seattle structural G ce | 100.0 | |
| 1qez_A | 173 | Ppase, S-ppase, protein (inorganic pyrophosphatase | 100.0 | |
| 1sxv_A | 172 | Inorganic pyrophosphatase; structural genomics, pp | 100.0 |
| >1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-83 Score=600.44 Aligned_cols=235 Identities=48% Similarity=0.892 Sum_probs=225.1
Q ss_pred ceeEEEecCCCCcceEEEEEcCCCCccCCCCCCCCCCC--CCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeE
Q 022875 55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY 132 (291)
Q Consensus 55 ~~~~~~~G~~~t~~~r~~~~~~~g~~~SpwHDIPl~~~--~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~ 132 (291)
+|+++++|+++|++||+||++ +|+++|||||||++.+ ++.|||||||||||++|||+++++++|||+||.++|++|+
T Consensus 1 ~y~~~~~G~~~t~~~r~~~~~-~g~~~sp~hdIp~~~~~~~~~~nvVIEIP~gs~~KyEidk~~~~nPIkqd~k~G~lr~ 79 (286)
T 1e9g_A 1 TYTTRQIGAKNTLEYKVYIEK-DGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRF 79 (286)
T ss_dssp CEEEEEEEETTSTTCEEEEEE-TTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECB
T ss_pred CceeeeecCCCCcceEEEEEe-CCeecCchhhCCCCCCCCCCEEEEEEEECCCCCeEEEEccCCCCCcchhhhcCCcEEE
Confidence 489999999999999999987 6999999999999865 3799999999999999999999999999999999999987
Q ss_pred ----ecc-ccccccCccccccCCCCcCCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEE
Q 022875 133 ----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAI 207 (291)
Q Consensus 133 ----yP~-~~~~NYGfIPqTwedp~~~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV 207 (291)
||+ .|||||||||||||||++.+++ ||+.||||||||||||++++.+|+|++|||||+|+|+|+||+|||||||
T Consensus 80 dr~l~~~~~YP~NYGfIPqTledp~~~~~~-t~~~gDgDPLDVlvi~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaV 158 (286)
T 1e9g_A 80 VRNCFPHHGYIHNYGAFPQTWEDPNVSHPE-TKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAI 158 (286)
T ss_dssp CCEETTCCSCSSEEEECSSCCCCTTSEETT-TTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEE
T ss_pred EeccCCCCCCccCcccCcccccCccccccc-CCCCCCCCceEEEEecCccCCCccEEEEEEeEEEEeccCCCCCceEEEE
Confidence 564 5899999999999999999997 8999999999999999999999999999999999999999999999999
Q ss_pred eCCCccccCCCCcccccccChhHHHHHHHHHHhccCCCCCcceEeecCCCCCCHHHHHHHHHHHHHHHHHHhcCcc-CCC
Q 022875 208 SLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSI-EAG 286 (291)
Q Consensus 208 ~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~YK~~eGK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~l~~~~~-~~~ 286 (291)
+++||+|++|||++||++++|++|++|+|||++||.++||++|.|++.+.+.++++|+++|++||++|++|+.|+. ++|
T Consensus 159 ~~~Dp~~~~i~di~Dl~~~~p~~l~~i~~fF~~YK~leGK~~n~~~~~~~~~~~~~A~~vI~~~~~~~~~l~~~~~~~~~ 238 (286)
T 1e9g_A 159 DINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSK 238 (286)
T ss_dssp ETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCCCCEEGGGGCCBCHHHHHHHHHHHHHHHHHHHTTCCSCCT
T ss_pred eCCCcccccCCCHHHhchhhHHHHHHHHHHHHHhcCcCCCCcceeEecCcCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999988899999999999999999999999998 889
Q ss_pred CcccC
Q 022875 287 ELSLV 291 (291)
Q Consensus 287 ~~~~~ 291 (291)
+|+|.
T Consensus 239 ~~~~~ 243 (286)
T 1e9g_A 239 GIDLT 243 (286)
T ss_dssp TCCCC
T ss_pred cccee
Confidence 99873
|
| >3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A | Back alignment and structure |
|---|
| >2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 | Back alignment and structure |
|---|
| >3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A | Back alignment and structure |
|---|
| >3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* | Back alignment and structure |
|---|
| >2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* | Back alignment and structure |
|---|
| >3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A | Back alignment and structure |
|---|
| >2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A | Back alignment and structure |
|---|
| >3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0 | Back alignment and structure |
|---|
| >3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* | Back alignment and structure |
|---|
| >1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 | Back alignment and structure |
|---|
| >1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 291 | ||||
| d1e9ga_ | 284 | b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's y | 9e-85 | |
| d1twla_ | 173 | b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcu | 9e-47 | |
| d2prda_ | 174 | b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus t | 3e-42 | |
| d1i40a_ | 175 | b.40.5.1 (A:) Inorganic pyrophosphatase {Escherich | 5e-37 | |
| d1qeza_ | 170 | b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon | 3e-36 |
| >d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 284 | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Inorganic pyrophosphatase family: Inorganic pyrophosphatase domain: Inorganic pyrophosphatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 253 bits (648), Expect = 9e-85
Identities = 111/238 (46%), Positives = 155/238 (65%), Gaps = 9/238 (3%)
Query: 57 QITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVAT 114
+ G TL+Y+V+ GK VS +HDIPL + +FN VVEIP+ ++AK+E+
Sbjct: 3 TTRQIGAKNTLEYKVYI-EKDGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITK 61
Query: 115 DELYTPIKQDIKKGKLRYY-----PYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVD 169
+E PI QD KKGKLR+ + NYG FPQTWEDP+ ++ E A GDNDP+D
Sbjct: 62 EETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPET-KAVGDNDPID 120
Query: 170 VVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPG 229
V+EIGE G++ +VK L +A++DEGE DWK++AI ++DP A +ND++DVEK+FPG
Sbjct: 121 VLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPG 180
Query: 230 TLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGE 287
L A +WFR YKIPDGKP N+F +A +K YAL +I ET++SW +L+ +
Sbjct: 181 LLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSK 238
|
| >d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 173 | Back information, alignment and structure |
|---|
| >d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Length = 174 | Back information, alignment and structure |
|---|
| >d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Length = 175 | Back information, alignment and structure |
|---|
| >d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 170 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 291 | |||
| d1e9ga_ | 284 | Inorganic pyrophosphatase {Baker's yeast (Saccharo | 100.0 | |
| d1twla_ | 173 | Inorganic pyrophosphatase {Pyrococcus furiosus [Ta | 100.0 | |
| d2prda_ | 174 | Inorganic pyrophosphatase {Thermus thermophilus [T | 100.0 | |
| d1qeza_ | 170 | Inorganic pyrophosphatase {Archaeon Sulfolobus aci | 100.0 | |
| d1i40a_ | 175 | Inorganic pyrophosphatase {Escherichia coli [TaxId | 100.0 |
| >d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Inorganic pyrophosphatase family: Inorganic pyrophosphatase domain: Inorganic pyrophosphatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.3e-88 Score=624.98 Aligned_cols=235 Identities=48% Similarity=0.887 Sum_probs=224.2
Q ss_pred ceeEEEecCCCCcceEEEEEcCCCCccCCCCCCCCCC--CCCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeE
Q 022875 55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQL--GDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY 132 (291)
Q Consensus 55 ~~~~~~~G~~~t~~~r~~~~~~~g~~~SpwHDIPl~~--~~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~ 132 (291)
+|+++++|+++|++||+||. .+|+++||||||||++ .+++|||||||||||++||||+|++++|||+||.++|++|+
T Consensus 1 sy~~~~~G~~~t~~yr~~~~-~~g~~iSp~HDIPl~~d~~~~~~nvVVEIPrgsn~KyEi~ke~~~npIkqD~k~G~lr~ 79 (284)
T d1e9ga_ 1 TYTTRQIGAKNTLEYKVYIE-KDGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRF 79 (284)
T ss_dssp CEEEEEEEETTSTTCEEEEE-ETTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECB
T ss_pred CceeeEccCCCCcceeEEEc-cCCcccCccccCCCCCCCCCCEEEEEEEeCCCCCeeEEECcCCCCCceeeeccCCCEEE
Confidence 59999999999999999996 5899999999999985 46899999999999999999999999999999999999987
Q ss_pred ----ecc-ccccccCccccccCCCCcCCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEE
Q 022875 133 ----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAI 207 (291)
Q Consensus 133 ----yP~-~~~~NYGfIPqTwedp~~~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV 207 (291)
||+ .||||||||||||+||++.++. ++|.||||||||||||+.++.+|+|++|||||+|+|+|+||+|||||||
T Consensus 80 ~r~l~~~~~YP~NYGfIPqTwedp~~~~~~-~~~~GDgDPLDVlvi~~~~~~~G~Vv~vk~lGvL~miDeGE~D~KIIaV 158 (284)
T d1e9ga_ 80 VRNCFPHHGYIHNYGAFPQTWEDPNVSHPE-TKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAI 158 (284)
T ss_dssp CCEETTCCSCSSEEEECSSCCCCTTSEETT-TTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEE
T ss_pred EeccCCCCCCCcccccCcccccCccccccc-ccccCCCCCeeEEEecccccccceEEEEEEEEEEEeccCCCccceEEEe
Confidence 565 5999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred eCCCccccCCCCcccccccChhHHHHHHHHHHhccCCCCCcceEeecCCCCCCHHHHHHHHHHHHHHHHHHhcCccC-CC
Q 022875 208 SLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIE-AG 286 (291)
Q Consensus 208 ~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~YK~~eGK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~l~~~~~~-~~ 286 (291)
+++||+++++|||+||++++||+|++|++||++||.++||++|.|+|.|+++++++|+++|++||++|++|++|+.. ++
T Consensus 159 ~~~Dp~~~~~ndI~Dv~~~~p~~l~~i~~fF~~YK~~eGK~~n~~~~~g~~~~k~~A~~iI~e~h~~wk~li~g~~~~~~ 238 (284)
T d1e9ga_ 159 DINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSK 238 (284)
T ss_dssp ETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCCCCEEGGGGCCBCHHHHHHHHHHHHHHHHHHHTTCCSCCT
T ss_pred ecCCccccccCChhhhhhhCHHHHHHHHHHHHHhcCCCCCceeEeeccCcccCHHHHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998865 45
Q ss_pred CcccC
Q 022875 287 ELSLV 291 (291)
Q Consensus 287 ~~~~~ 291 (291)
+|+|.
T Consensus 239 ~~~~~ 243 (284)
T d1e9ga_ 239 GIDLT 243 (284)
T ss_dssp TCCCC
T ss_pred cccee
Confidence 68763
|
| >d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|