Citrus Sinensis ID: 022879

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Secondary Structure (PSIPRED)
ccccccccEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccEEEEccccccccccEEEEccccEEEccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHcccEEEEEEEcccccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
EEcccEEEEEEEEEcccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
MVIGHECAGVIEKVGsevktlvpgdrvalepgiscwrcdhckggrynlcpemkffatppvhgslanqvvhpadlcfklpdnvsleegamceplsvgvhacrranigpetnvlimgaGPIGLVTMLAARafgaprivivdvddyRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTgidvsfdcaglnktmstalgatcaggkvclvgmghhemtvpltpaavreVDVVGVFRYKNTWPLCLELLRsgkidvkplvthrfgfsQKEVEEAFETSARGGTAIKVMFNL
Flexible Loop (DISEMBL)
mvighecagviekvgsevktlvpgdrvalepgiscwrcdHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAkeigadnivkvSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAfetsarggtaiKVMFNL
Low Complexity Region (SEG)
MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered region (IsUnstruct)
**IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK**********************
Disordered Region (DISOPRED)
MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISEMBL)
MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISPRO)
MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNxxxxxxxxxxxxxxxxxxxxxMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	no	no	1.0	0.792	0.813	1e-142
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.975	0.794	0.503	5e-74
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.975	0.799	0.496	5e-73
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.975	0.792	0.5	9e-73
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.975	0.792	0.5	1e-72
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.975	0.792	0.496	2e-72
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.975	0.792	0.493	2e-72
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.975	0.792	0.493	5e-72
Q86ZV0	358	D-xylulose reductase A OS	no	no	0.972	0.787	0.431	2e-60
Q0CWQ2	353	Probable D-xylulose reduc	N/A	no	0.982	0.807	0.436	2e-60

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  503 bits (1296), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 236/290 (81%), Positives = 264/290 (91%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGSEVK LV GDRVALEPGISC RC  C+ G+YNLC EMKFF +PP 
Sbjct: 77  MVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPT 136

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRAN+GPETNVLIMG+GPIG
Sbjct: 137 NGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIG 196

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAPRIV+VDVDD RL++AK++GAD+I++VSTN+QD+ EEV KIQ  M TG
Sbjct: 197 LVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTG 256

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DVSFDC G NKTMSTAL AT AGGKVCLVG+   EMTVPLTPAA REVD+VG+FRY+NT
Sbjct: 257 VDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNT 316

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRF FSQK+VEEAFETSARGG AIKVMFNL
Sbjct: 317 WPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  277 bits (709), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 146/290 (50%), Positives = 200/290 (68%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct: 65  MVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPD 124

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIG
Sbjct: 125 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 184

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           LV++LAA+A GA ++V+ D+   RLS AKE+GAD I+++S  + Q+IA++VE +   +G+
Sbjct: 185 LVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGS 241

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY N
Sbjct: 242 KPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCN 301

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM  
Sbjct: 302 TWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMIK 348

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  274 bits (701), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 199/290 (68%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP 
Sbjct: 63  MVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPD 122

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIG
Sbjct: 123 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 182

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           LV +LAA+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+
Sbjct: 183 LVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGS 239

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY N
Sbjct: 240 KPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCN 299

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM  
Sbjct: 300 TWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMIK 346

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  273 bits (698), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 194/290 (66%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct: 66  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 125

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct: 126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           +VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE     +G 
Sbjct: 186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGC 242

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY N
Sbjct: 243 KPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCN 302

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 303 TWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 199/290 (68%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP 
Sbjct: 66  MVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPD 125

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG
Sbjct: 126 DGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIG 185

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
           +VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+
Sbjct: 186 IVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGS 242

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY N
Sbjct: 243 KPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCN 302

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 303 TWPMAVSMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGLGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 195/290 (67%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct: 66  MVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPD 125

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct: 126 DGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           +VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE +   +G 
Sbjct: 186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGC 242

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GVFRY N
Sbjct: 243 KPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCN 302

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPL+THRF    ++  EAFET  + G  +K+M  
Sbjct: 303 TWPVAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  272 bits (695), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/290 (49%), Positives = 198/290 (68%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP 
Sbjct: 66  MVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPD 125

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G
Sbjct: 126 DGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVG 185

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
           +VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+
Sbjct: 186 MVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGS 242

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY N
Sbjct: 243 KPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCN 302

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 303 TWPMAISMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGVGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  271 bits (693), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 143/290 (49%), Positives = 196/290 (67%), Gaps = 7/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP 
Sbjct: 66  MVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPD 125

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct: 126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIG 185

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           +V++L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE +   +G 
Sbjct: 186 VVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGC 242

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AAVREVD+ GVFRY N
Sbjct: 243 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCN 302

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  +++KPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 303 TWPVAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q86ZV0|XYL2_ASPOR D-xylulose reductase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xdhA PE=3 SV=2

 Score =  233 bits (593), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/290 (43%), Positives = 177/290 (61%), Gaps = 8/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +GVI KVGS V TL  GD VA+EPGI C RC+ CK G+YNLC +M F ATPP 
Sbjct: 68  MVLGHESSGVISKVGSAVTTLKVGDHVAMEPGIPCRRCEPCKEGKYNLCEKMAFAATPPY 127

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+LA   V P D C+KLP+N++L+E A+ EPLSV VH  ++AN+ P  +V++ GAGP+G
Sbjct: 128 DGTLAKYYVLPEDFCYKLPENINLQEAAVMEPLSVAVHIVKQANVAPGQSVVVFGAGPVG 187

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI--QKAMG 178
           L+    ARAFG+P+++ VD+   RL  AK+  A  I + S       E  E+I  +  +G
Sbjct: 188 LLCCAVARAFGSPKVIAVDIQKGRLEFAKKYAATAIFEPSK--VSALENAERIVNENDLG 245

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237
            G D+  D +G   ++ T +     GG     GMG +E+T P+  A  +E++V G FRY 
Sbjct: 246 RGADIVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEITFPIMAACTKELNVRGSFRYG 305

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
              + L + L+ SGK+ VK L+T    F  ++ E+AF    + G  IK +
Sbjct: 306 SGDYKLAVNLVASGKVSVKELITGVVSF--EDAEQAFH-EVKAGKGIKTL 352

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q0CWQ2|XYL2_ASPTN Probable D-xylulose reductase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=xdhA PE=3 SV=1

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 175/291 (60%), Gaps = 6/291 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +GVI KVGS V TL  GDRVA+EPGI C RC+ CK G+YNLC EM F ATPP 
Sbjct: 63  MVLGHESSGVITKVGSAVTTLKVGDRVAMEPGIPCRRCEPCKAGKYNLCYEMAFAATPPY 122

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+LA     P D C+KLP+ ++L+EGA+ EPL V VH  R+A + P  +V++ GAGP+G
Sbjct: 123 DGTLAKYYALPEDFCYKLPEQITLQEGALMEPLGVAVHIVRQAAVTPGQSVVVFGAGPVG 182

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK-VSTNLQDIAEEVEKIQKAMGT 179
           L+    ARAFGA +IV VD+   RL  AK   A  I +      Q+ A  +   +  +G 
Sbjct: 183 LLCCAVARAFGASKIVAVDIQKPRLEFAKNYAATAIFEPAKVAAQENAARL-IAENDLGP 241

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K 238
           G DV+ D +G   ++ T +     GG     GMG  EM  P+  A  +E++V G FRY  
Sbjct: 242 GADVAIDASGAEPSVHTGIHVLRTGGTYVQGGMGRSEMNFPIMAACTKELNVKGSFRYGS 301

Query: 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
             + L +EL+ SG+++VK L+T    F  +E E+AF+   + G  IK + +
Sbjct: 302 GDYKLAVELVASGRVNVKELITGVVKF--EEAEQAFK-EVKAGKGIKTLIS 349

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
350538545	355	sorbitol related enzyme [Solanum lycoper	1.0	0.816	0.879	1e-151
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	1.0	0.801	0.875	1e-151
358345353	317	L-idonate 5-dehydrogenase [Medicago trun	1.0	0.914	0.875	1e-151
358248648	364	uncharacterized protein LOC100791559 [Gl	1.0	0.796	0.882	1e-150
255539581	364	alcohol dehydrogenase, putative [Ricinus	1.0	0.796	0.886	1e-150
217072128	362	unknown [Medicago truncatula] gi|3885198	1.0	0.801	0.868	1e-150
225469310	365	PREDICTED: L-idonate 5-dehydrogenase [Vi	1.0	0.794	0.875	1e-149
224120122	364	predicted protein [Populus trichocarpa]	1.0	0.796	0.875	1e-149
147774828	346	hypothetical protein VITISV_036540 [Viti	1.0	0.838	0.875	1e-149
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	1.0	0.796	0.872	1e-149

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 255/290 (87%), Positives = 276/290 (95%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VG EVKTLVPGDRVALEPGISCWRC+ CK GRYNLCPEMKFFATPPV
Sbjct: 66  MVIGHECAGIIEEVGGEVKTLVPGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPV 125

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQVVHPADLCFKLPD++SLEEGAMCEPLSVGVHACRRAN+GPETN+L++GAGPIG
Sbjct: 126 HGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVHACRRANVGPETNILVLGAGPIG 185

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVT+LAARAFGAPRIVIVDVDDYRLSVAK++GAD+IVKVS N+QD+A ++E IQKAMG G
Sbjct: 186 LVTLLAARAFGAPRIVIVDVDDYRLSVAKKLGADDIVKVSINIQDVATDIENIQKAMGGG 245

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           ID SFDCAG NKTMSTALGAT  GGKVCLVGMGHHEMTVPLTPAA REVDV+G+FRYKNT
Sbjct: 246 IDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMTVPLTPAAAREVDVIGIFRYKNT 305

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQ+EVEEAFETSARGG AIKVMFNL
Sbjct: 306 WPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSARGGDAIKVMFNL 355

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 276/290 (95%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGS+VKTLVPGDRVA+EPGISCWRCDHCK GRYNLCP+MKFFATPPV
Sbjct: 73  MVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRYNLCPDMKFFATPPV 132

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG
Sbjct: 133 HGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 192

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTML+ARAFGAPRIV+VDVDD+RLSVAK +GAD+IVKVSTN+QD+AEEV++I   +G G
Sbjct: 193 LVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVKQIHNVLGAG 252

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMTVPLTPAA REVDVVG+FRYKNT
Sbjct: 253 VDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFRYKNT 312

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKVMFNL
Sbjct: 313 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345353|ref|XP_003636745.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502680|gb|AES83883.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 276/290 (95%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGS+VKTLVPGDRVA+EPGISCWRCDHCK GRYNLCP+MKFFATPPV
Sbjct: 28  MVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRYNLCPDMKFFATPPV 87

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG
Sbjct: 88  HGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 147

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTML+ARAFGAPRIV+VDVDD+RLSVAK +GAD+IVKVSTN+QD+AEEV++I   +G G
Sbjct: 148 LVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVKQIHNVLGAG 207

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMTVPLTPAA REVDVVG+FRYKNT
Sbjct: 208 VDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFRYKNT 267

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKVMFNL
Sbjct: 268 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 317

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248648|ref|NP_001239661.1| uncharacterized protein LOC100791559 [Glycine max] gi|255638941|gb|ACU19772.1| unknown [Glycine max]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 256/290 (88%), Positives = 272/290 (93%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCWRCDHCK GRYNLC +MKFFATPPV
Sbjct: 75  MVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWRCDHCKQGRYNLCDDMKFFATPPV 134

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPET VLIMGAGPIG
Sbjct: 135 HGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETYVLIMGAGPIG 194

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAPR VIVDVDDYRLSVAK +GAD+IVKVSTN+QD+AEEV +IQK MG  
Sbjct: 195 LVTMLAARAFGAPRTVIVDVDDYRLSVAKSLGADDIVKVSTNIQDVAEEVVQIQKVMGAD 254

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           IDV+FDCAG +KTMSTAL AT  GGKVCLVGMGH EMTVPLTPAA REVDV+GVFRY NT
Sbjct: 255 IDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVLGVFRYMNT 314

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKVMFNL
Sbjct: 315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539581|ref|XP_002510855.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223549970|gb|EEF51457.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 257/290 (88%), Positives = 274/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE VGSEVK LVPGDRVALEPGISCWRCD CK GRYNLCPEMKFFATPPV
Sbjct: 75  MVIGHECAGIIEGVGSEVKNLVPGDRVALEPGISCWRCDLCKEGRYNLCPEMKFFATPPV 134

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQVVHPADLCF+LP+NVSLEEGAMCEPLSVGVHACRRANIGPETNVL+MGAGPIG
Sbjct: 135 HGSLANQVVHPADLCFRLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIG 194

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAPRIVIVDVDDYRLSVAK++GAD IVKVST++QD+A+EV  I KAMGTG
Sbjct: 195 LVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADAIVKVSTSIQDVADEVVLIHKAMGTG 254

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DV+ DCAG NKTMS+AL AT +GGKVCLVGMGH+EMTVPLTPAA REVDV+GVFRYKNT
Sbjct: 255 VDVTLDCAGFNKTMSSALSATRSGGKVCLVGMGHNEMTVPLTPAAAREVDVIGVFRYKNT 314

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVE AFETSARGG AIKVMFNL
Sbjct: 315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEAAFETSARGGDAIKVMFNL 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072128|gb|ACJ84424.1| unknown [Medicago truncatula] gi|388519843|gb|AFK47983.1| unknown [Medicago truncatula]

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 252/290 (86%), Positives = 274/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+I + GS+VKTLVPGDRVA+EPGISCWRCDHCK GRYNLCP+MKFFATPPV
Sbjct: 73  MVIGHECAGIIGEAGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRYNLCPDMKFFATPPV 132

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG
Sbjct: 133 HGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 192

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTML+ARAFGAPRIV+VDVDD+RLSVAK +GAD+IVKVSTN+QD+AEEV++I   +G G
Sbjct: 193 LVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVKQIHNVLGAG 252

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMTVPLTPAA REVDVVG+FRYKNT
Sbjct: 253 VDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFRYKNT 312

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKVMFNL
Sbjct: 313 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469310|ref|XP_002269895.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|297741125|emb|CBI31856.3| unnamed protein product [Vitis vinifera]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 274/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+I++VG +VK+LVPGDRVALEPGISCWRC  CK GRYNLCPEMKFFATPPV
Sbjct: 76  MVIGHECAGIIDEVGPQVKSLVPGDRVALEPGISCWRCQLCKEGRYNLCPEMKFFATPPV 135

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA+IGPE+NVL+MGAGPIG
Sbjct: 136 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADIGPESNVLVMGAGPIG 195

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAPRIVIVDVDDYRLSVAK++GAD IVKVSTN+QD+AEEV +I KAMG  
Sbjct: 196 LVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQDVAEEVVQIHKAMGAR 255

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DVSFDCAG +KTMSTAL AT  GGKVCLVGMGH+EMTVPLTPAA REVDVVGVFRYKNT
Sbjct: 256 VDVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYKNT 315

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WP+C+E LRS KIDVKPL+THRFGFSQ+EVEEAFETSARGGTAIKVMFNL
Sbjct: 316 WPICIEFLRSVKIDVKPLITHRFGFSQREVEEAFETSARGGTAIKVMFNL 365

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 273/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGSE+K+LVPGDRVALEPGISCWRC  CK GRYNLCP+MKFFATPPV
Sbjct: 75  MVIGHECAGIIEEVGSEIKSLVPGDRVALEPGISCWRCYLCKEGRYNLCPDMKFFATPPV 134

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVL+MGAGPIG
Sbjct: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIG 194

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVT+LAARAFGAPRIVIVDVDDYRLSVAK++GAD IVKVSTNLQD+ +EV  I +AMGTG
Sbjct: 195 LVTLLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNLQDVDQEVVLIHQAMGTG 254

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DV+FDCAG NKTMSTAL AT  GGKVCL+GMGH+EMTVPLTPAA REVDV+GVFRYKNT
Sbjct: 255 VDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMTVPLTPAAAREVDVIGVFRYKNT 314

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLC+E L SGKIDVKPL+THRFGFSQKEVEEAFETSA G TAIKVMFNL
Sbjct: 315 WPLCIEFLSSGKIDVKPLITHRFGFSQKEVEEAFETSASGSTAIKVMFNL 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147774828|emb|CAN73444.1| hypothetical protein VITISV_036540 [Vitis vinifera]

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 274/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+I++VG +VK+LVPGDRVALEPGISCWRC  CK GRYNLCPEMKFFATPPV
Sbjct: 57  MVIGHECAGIIDEVGPQVKSLVPGDRVALEPGISCWRCQLCKEGRYNLCPEMKFFATPPV 116

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA+IGPE+NVL+MGAGPIG
Sbjct: 117 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADIGPESNVLVMGAGPIG 176

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAPRIVIVDVDDYRLSVAK++GAD IVKVSTN+QD+AEEV +I KAMG  
Sbjct: 177 LVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQDVAEEVVQIHKAMGAR 236

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           +DVSFDCAG +KTMSTAL AT  GGKVCLVGMGH+EMTVPLTPAA REVDVVGVFRYKNT
Sbjct: 237 VDVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYKNT 296

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WP+C+E LRS KIDVKPL+THRFGFSQ+EVEEAFETSARGGTAIKVMFNL
Sbjct: 297 WPICIEFLRSVKIDVKPLITHRFGFSQREVEEAFETSARGGTAIKVMFNL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  531 bits (1369), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 253/290 (87%), Positives = 273/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCW C+HCK GRYNLC +MKFFATPPV
Sbjct: 75  MVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRYNLCDDMKFFATPPV 134

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG
Sbjct: 135 HGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 194

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAP+ VIVDVDD+RLSVAK +GAD+I+KVSTN++D+AEEV +IQK MG G
Sbjct: 195 LVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKDVAEEVVQIQKVMGAG 254

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           IDV+FDCAG +KTMSTAL AT  GGKVCLVGMGH EMTVPLTPAA REVDVVGVFRY NT
Sbjct: 255 IDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGVFRYMNT 314

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKVMFNL
Sbjct: 315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	1.0	0.796	0.848	8.8e-134
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.989	0.797	0.539	2.4e-76
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.989	0.797	0.536	8.1e-76
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.968	0.809	0.477	5.3e-72
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.968	0.789	0.510	9.9e-71
RGD|3734	357	Sord "sorbitol dehydrogenase"	0.968	0.787	0.503	1.3e-70
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.968	0.789	0.513	1.6e-70
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.968	0.787	0.496	2.6e-70
UNIPROTKB|H0YLA4	336	SORD "Sorbitol dehydrogenase"	0.968	0.836	0.506	3.3e-70
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.968	0.787	0.506	3.3e-70

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
 Identities = 246/290 (84%), Positives = 266/290 (91%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRYNLCPEMKFFATPPV
Sbjct:    75 MVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLCPEMKFFATPPV 134

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
             HGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVGVHACRRA +GPETNVL+MGAGPIG
Sbjct:   135 HGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGAGPIG 194

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
             LVTMLAARAF  PRIVIVDVD+ RL+VAK++GAD IV+V+TNL+D+  EVE+IQKAMG+ 
Sbjct:   195 LVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDVGSEVEQIQKAMGSN 254

Query:   181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
             IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MTVPLTPAA REVDVVGVFRYKNT
Sbjct:   255 IDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAAREVDVVGVFRYKNT 314

Query:   241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
             WPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIKVMFNL
Sbjct:   315 WPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIKVMFNL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 157/291 (53%), Positives = 199/291 (68%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             M+IGHE AGV+ K+G +V TL  GDRVA+EPG+ C  CDHCK GRYNLC +M F ATPP 
Sbjct:    62 MIIGHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPY 121

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H AD CFKLPD+VS+EEGA+ EPLSVGVHACRRA +G  + VLI+GAGPIG
Sbjct:   122 DGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIG 181

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
             LVT+LAA+A GA  I+I D+   RL VAKE+GA + + +  + Q   E V+ + + M   
Sbjct:   182 LVTLLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQTMSEV 240

Query:   181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
              D S DC G   +   A+ AT +GG V +VGMG  E+ +PL  A  RE+D+ GVFRY N 
Sbjct:   241 PDKSIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCND 300

Query:   241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 290
             +   L L+ SGK++VK LVTH +  +  E  EAFETS RG G AIKVM ++
Sbjct:   301 YSAALALVASGKVNVKRLVTHHYDIT--ETAEAFETSRRGTGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
 Identities = 156/291 (53%), Positives = 199/291 (68%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             M+IGHE AGV+ K+G +V TL  GDRVA+EPG+ C +CDHCK G+YNLCP M F ATPP 
Sbjct:    62 MIIGHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPY 121

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H AD CFKLPD+V++EEGA+ EPLSVGVHAC+RA +   + VLI+GAGPIG
Sbjct:   122 DGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIG 181

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
             LVT++AA+A GA  I+I D+   RL VAKE+GA + + +  + Q   E    +QK MG  
Sbjct:   182 LVTLMAAQAMGASEILITDLVQQRLDVAKELGATHTLLLKRD-QTAEETAVLVQKTMGGQ 240

Query:   181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
              D S DC G   +   A+ AT +GG V +VGMG  E+ +PL  A  REVD+ GVFRY N 
Sbjct:   241 PDKSIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCND 300

Query:   241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 290
             +   L L+ SGK++VK LVTH F    KE  +AFETS +G G AIKVM ++
Sbjct:   301 YAAALALVASGKVNVKRLVTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 137/287 (47%), Positives = 199/287 (69%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             M++GHE +G++ +VG+EVK L  GDR+A+EPG+ C  C+HCK GRYNLCPEM+FFATPPV
Sbjct:    62 MIVGHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPV 121

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
             HG+L+  VVH AD CFKLPDN+S E+GA+ EPLSV +HACRR N+     VL++GAGPIG
Sbjct:   122 HGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIG 181

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
             ++ ++ A+A GA ++VI D+DD RL++AK++GAD  + V     D  +   +I  A+G  
Sbjct:   182 VLNLITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKS--EIITALGDQ 239

Query:   181 I-DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               DV  +C G   ++ TA+  T +GG + LVG+G   + +P+  +A REVD+ G+FRY N
Sbjct:   240 QPDVCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVN 299

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
              +P  +EL+ SGK+++  L   R  +  +E +EAF+ + +    IKV
Sbjct:   300 CYPTAIELISSGKLNLSGLT--RAHYKLEETQEAFKRTQKADV-IKV 343

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 147/288 (51%), Positives = 200/288 (69%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MV+GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct:    65 MVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPD 124

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIG
Sbjct:   125 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 184

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
             LV++LAA+A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE +   +G+
Sbjct:   185 LVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGS 241

Query:   180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY N
Sbjct:   242 KPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCN 301

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
             TWP+ + +L S  ++VKPLVTHRF   +K +E AFETS +G   +KVM
Sbjct:   302 TWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKKG-LGLKVM 346

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|3734 Sord "sorbitol dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
 Identities = 145/288 (50%), Positives = 199/288 (69%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MV+GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP 
Sbjct:    66 MVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPD 125

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG
Sbjct:   126 DGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIG 185

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
             +VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+
Sbjct:   186 IVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGS 242

Query:   180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY N
Sbjct:   243 KPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCN 302

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
             TWP+ + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   303 TWPMAVSMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGLGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0006060 "sorbitol metabolic process" evidence=ISO

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0008270 "zinc ion binding" evidence=ISO;IDA

GO:0009725 "response to hormone stimulus" evidence=IDA

GO:0016020 "membrane" evidence=ISO

GO:0030317 "sperm motility" evidence=ISO;ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0042493 "response to drug" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=IDA

GO:0046688 "response to copper ion" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 148/288 (51%), Positives = 197/288 (68%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MV+GHE +G + KVGS VK L  GDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct:    65 MVLGHEASGTVVKVGSLVKHLKSGDRVAIEPGALREMDEFCKIGRYNLSPSIFFCATPPD 124

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H AD C+KLPDNV+ EEGA+ EPLSVG+HACRRA I     VL+ GAGPIG
Sbjct:   125 DGNLCQFYKHNADFCYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCGAGPIG 184

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
             LVT++ A+A GA ++++ D+   RLS AKE+GAD ++++S    ++IA +VE +   +G 
Sbjct:   185 LVTLIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISKESPKEIASKVEDM---LGC 241

Query:   180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               + + +C G+   + + + AT AGG + LVG+G    TVPLT A+ REVD+ GVFRY N
Sbjct:   242 KPEATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTREVDIKGVFRYCN 301

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
             TWP+ + +L S  ++VKPLVTHRF   +K +E AFET AR GT +KVM
Sbjct:   302 TWPMAISMLASKAVNVKPLVTHRFPL-EKALE-AFET-ARKGTGLKVM 346

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
 Identities = 143/288 (49%), Positives = 198/288 (68%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MV+GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP 
Sbjct:    66 MVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPD 125

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G
Sbjct:   126 DGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVG 185

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
             +VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+
Sbjct:   186 MVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGS 242

Query:   180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY N
Sbjct:   243 KPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCN 302

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
             TWP+ + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   303 TWPMAISMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGVGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

UNIPROTKB|H0YLA4 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 146/288 (50%), Positives = 194/288 (67%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct:    45 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 104

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct:   105 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 164

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
             +VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE     +G 
Sbjct:   165 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG---QLGC 221

Query:   180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY N
Sbjct:   222 KPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCN 281

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
             TWP+ + +L S  ++VKPLVTHRF   +K +E AFET  +G   +K+M
Sbjct:   282 TWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG-LGLKIM 326

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 146/288 (50%), Positives = 194/288 (67%)

Query:     1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct:    66 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 125

Query:    61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
              G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct:   126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query:   121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT 179
             +VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE     +G 
Sbjct:   186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG---QLGC 242

Query:   180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
               +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY N
Sbjct:   243 KPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCN 302

Query:   240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
             TWP+ + +L S  ++VKPLVTHRF   +K +E AFET  +G   +K+M
Sbjct:   303 TWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B2JYP4	TDH_YERPB	1, ., 1, ., 1, ., 1, 0, 3	0.3310	0.9551	0.8123	yes	no
A8GLC6	TDH_SERP5	1, ., 1, ., 1, ., 1, 0, 3	0.3321	0.9586	0.8152	yes	no
A1JHX8	TDH_YERE8	1, ., 1, ., 1, ., 1, 0, 3	0.3344	0.9551	0.8123	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.5034	0.9758	0.7949	yes	no
B1JQW2	TDH_YERPY	1, ., 1, ., 1, ., 1, 0, 3	0.3310	0.9551	0.8123	yes	no
Q48AM4	TDH_COLP3	1, ., 1, ., 1, ., 1, 0, 3	0.3184	0.9586	0.8152	yes	no
A7HEI5	TDH_ANADF	1, ., 1, ., 1, ., 1, 0, 3	0.3265	0.9517	0.8046	yes	no
A7FCU5	TDH_YERP3	1, ., 1, ., 1, ., 1, 0, 3	0.3310	0.9551	0.8123	yes	no
Q66GC5	TDH_YERPS	1, ., 1, ., 1, ., 1, 0, 3	0.3310	0.9551	0.8123	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.n8	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-159
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	5e-80
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	4e-77
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	2e-76
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-75
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-74
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	3e-67
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	4e-65
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-56
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	5e-53
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	6e-53
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-51
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-51
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-50
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	6e-50
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-46
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	4e-46
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	8e-46
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	5e-44
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-43
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	6e-43
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	6e-43
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-41
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-40
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	3e-40
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	7e-40
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-39
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-39
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	3e-39
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-38
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	7e-38
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-36
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-35
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	8e-35
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	6e-34
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-33
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	1e-32
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	1e-32
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	3e-32
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	4e-32
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	5e-32
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	5e-31
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-31
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-29
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	5e-29
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	9e-29
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-28
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-27
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	3e-27
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	6e-25
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-24
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-24
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-24
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-23
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	9e-23
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	5e-22
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-21
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	1e-20
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	2e-20
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-19
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	1e-19
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	3e-19
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-18
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-18
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-18
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	3e-18
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	4e-18
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	8e-18
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	9e-18
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-17
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-17
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	5e-16
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	7e-16
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	7e-16
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-15
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-15
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	2e-15
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	5e-15
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-14
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	3e-14
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	9e-13
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-12
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-12
smart00829	287	smart00829, PKS_ER, Enoylreductase	5e-12
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	5e-11
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	5e-10
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-09
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	5e-09
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-08
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-08
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-07
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-07
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	3e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	6e-07
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	7e-07
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	2e-06
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	4e-06
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	5e-06
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	7e-06
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	2e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	8e-05
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	2e-04
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	3e-04
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	3e-04
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-04
COG2226	238	COG2226, UbiE, Methylase involved in ubiquinone/me	0.001
PRK06392	326	PRK06392, PRK06392, homoserine dehydrogenase; Prov	0.002

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  603 bits (1556), Expect = 0.0
 Identities = 259/290 (89%), Positives = 273/290 (94%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHECAG+IE+VGSEVK LV GDRVALEPGISCWRC+ CK GRYNLCPEMKFFATPPV
Sbjct: 75  MVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPV 134

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
           HGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVGVHACRRANIGPETNVL+MGAGPIG
Sbjct: 135 HGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIG 194

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LVTMLAARAFGAPRIVIVDVDD RLSVAK++GAD IV VSTN++D+  EVE+IQKAMG G
Sbjct: 195 LVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
           IDVSFDC G NKTMSTAL AT AGGKVCLVGMGH+EMTVPLTPAA REVDVVGVFRY+NT
Sbjct: 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNT 314

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           WPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKVMFNL
Sbjct: 315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  447 bits (1153), Expect = e-159
 Identities = 164/291 (56%), Positives = 205/291 (70%), Gaps = 6/291 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE AG +  VGS V  L  GDRVA+EPG+ C  C+ CK GRYNLCP+M+F ATPPV
Sbjct: 56  MVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPV 115

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L   V HPAD C KLPDNVSLEEGA+ EPLSVGVHACRRA + P   VL+ GAGPIG
Sbjct: 116 DGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIG 175

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT- 179
           L+T   A+AFGA ++V+ D+D  RL  AKE+GA + V V T  +D  E  EKI + +G  
Sbjct: 176 LLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGK 233

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
           G DV  +C G    + TA+ AT  GG V LVGMG  E+T+PL+ A++RE+D+ GVFRY N
Sbjct: 234 GPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYAN 293

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 289
           T+P  +ELL SGK+DVKPL+THRF    ++  EAFET+A+G    IKV+  
Sbjct: 294 TYPTAIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  245 bits (627), Expect = 5e-80
 Identities = 111/291 (38%), Positives = 154/291 (52%), Gaps = 13/291 (4%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---- 56
           MV+GHE +GV+E VG  V  L PG RVA+ P   C  CD+C+ GR NLC  M+F      
Sbjct: 55  MVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMR 114

Query: 57  TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 116
            P V G     +V  A  C  LPD +SL   A+ EPL+V +HA  RA       VL+ GA
Sbjct: 115 FPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGA 174

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           GPIG + + AAR  GA  IV  D+ D  L+VA+ +GAD  V       ++A +      A
Sbjct: 175 GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETV-------NLARDPLAAYAA 227

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 236
                DV F+ +G    +++AL     GG V  VGM    + +PL     +E+D+ G FR
Sbjct: 228 DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFR 287

Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
           + + +   + LL +G+IDV+PL+T  F     E  EAF  +A    ++KV 
Sbjct: 288 FDDEFAEAVRLLAAGRIDVRPLITAVFPLE--EAAEAFALAADRTRSVKVQ 336

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  238 bits (609), Expect = 4e-77
 Identities = 102/299 (34%), Positives = 148/299 (49%), Gaps = 16/299 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
           +++GHE  G + +VG  V+    GDRV +EP I C  C +C+ G YNLC    F+     
Sbjct: 57  IILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGL 115

Query: 58  -PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIM 114
              + G  A  V  PAD    KLPD +  E  A+ EPL+   H    RA + P   V+++
Sbjct: 116 GGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVV 175

Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
           GAGPIGL+ +  A+  GA  +++VD    RL +AKE G  ++V    N  +     E ++
Sbjct: 176 GAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAEILE 232

Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVG 233
              G G DV  +  G    +  AL A   GG V +VG+   E         V +E+ + G
Sbjct: 233 LTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRG 292

Query: 234 VFR--YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFN 289
             R   +  +   L+LL SGKID + L+THR      +  EA+E  + R   AIKV+  
Sbjct: 293 SLRPSGREDFERALDLLASGKIDPEKLITHRLPLD--DAAEAYELFADRKEEAIKVVLK 349

Length = 350

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  236 bits (604), Expect = 2e-76
 Identities = 111/301 (36%), Positives = 166/301 (55%), Gaps = 24/301 (7%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+GHE +G +E+VGS V  L  GDRVA+ P + C +C++CK G Y+LC    +  +   
Sbjct: 54  LVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR-R 112

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+ A  V  PA    K+PD+V  EE AM EP +V +HA R A I     V+++GAG IG
Sbjct: 113 DGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIG 172

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GT 179
           L+ +   +  GA R++ VD+DD +L+VA+E+GAD+ +          E+VEK+++   G 
Sbjct: 173 LLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE------EDVEKVRELTEGR 226

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGV 234
           G D+  + AG   T+  AL     GGKV LVG+ + ++T  L+  A      +E+ + G 
Sbjct: 227 GADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT--LSEEAFEKILRKELTIQGS 284

Query: 235 FRYKNT------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA-IKVM 287
           +   +       W   L+LL SGKI V+PL+THR      +   AFE  A       KV+
Sbjct: 285 WNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLE--DGPAAFERLADREEFSGKVL 342

Query: 288 F 288
            
Sbjct: 343 L 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  234 bits (600), Expect = 1e-75
 Identities = 110/287 (38%), Positives = 156/287 (54%), Gaps = 7/287 (2%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
            +GHE +GV+ +VGS V     GDRV +EP I C  C  CK G YNLC  + F       
Sbjct: 67  TLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGG 126

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
           G  A  VV PA    KLPDNV LEE A+ EPL+V  HA RR+   P    L++GAGPIGL
Sbjct: 127 GGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGL 186

Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
           +T+LA +A GA +I++ +  + R  +A+E+GA  ++  +    D+  EV K+    G G+
Sbjct: 187 LTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLTG--GGGV 242

Query: 182 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNT 240
           DVSFDCAG+  T+ TA+ A    G    V +    ++       ++E  + G   Y +  
Sbjct: 243 DVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTRED 302

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKV 286
           +   ++LL SGKID +PL+T R       VE+ FE         +K+
Sbjct: 303 FEEVIDLLASGKIDAEPLITSRIPLEDI-VEKGFEELINDKEQHVKI 348

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  230 bits (590), Expect = 2e-74
 Identities = 109/290 (37%), Positives = 156/290 (53%), Gaps = 12/290 (4%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V GHE AGV+  VGS+V     GDRVA++P I C  C +C+ GR NLC  +        +
Sbjct: 55  VPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-RN 113

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
           G  A  VV PA   +K+PDN+S EE A+ EPLS  VH      I P  +VL+ GAGPIGL
Sbjct: 114 GGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGL 173

Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
           +     +  GA R+ + + ++ +L +AK++GA   V          E+ E  ++    G 
Sbjct: 174 LLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETV------DPSREDPEAQKEDNPYGF 227

Query: 182 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKN 239
           DV  +  G+ KT+  A+     GG V + G+   +  V ++P  +  +E+ ++G F    
Sbjct: 228 DVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPY 287

Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           T+P  + LL SGKIDVK LV+HR      EV EA E   R G A+KV+  
Sbjct: 288 TFPRAIALLESGKIDVKGLVSHRLPLE--EVPEALE-GMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  212 bits (542), Expect = 3e-67
 Identities = 110/301 (36%), Positives = 162/301 (53%), Gaps = 28/301 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATP 58
            ++GHE AG I +VG  V     GDRV + P + C  C +C  G  N+CP  K       
Sbjct: 55  RILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYD 114

Query: 59  PVHGSLANQVVHPA-----DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLI 113
              G  A  V  PA         KLPDNVS EE A+ EPL+  ++A R+A I P   VL+
Sbjct: 115 ---GGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLV 171

Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +GAGPIGL+  + A+A GA ++++ D++++RL  AK++GAD  +  +   +D+ E+V ++
Sbjct: 172 IGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVREL 229

Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDV 231
               G G DV     G  +  + AL     GG++   G      TV + P  +  RE+ +
Sbjct: 230 TD--GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITI 287

Query: 232 VGVFR-----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
            G +      YK      LEL+ SGKIDVK L+THRF    +++EEAFE  A  G ++K+
Sbjct: 288 TGSYAASPEDYKEA----LELIASGKIDVKDLITHRFPL--EDIEEAFEL-AADGKSLKI 340

Query: 287 M 287
           +
Sbjct: 341 V 341

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  207 bits (528), Expect = 4e-65
 Identities = 111/290 (38%), Positives = 166/290 (57%), Gaps = 15/290 (5%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++GHE +G + +VG  V  L  GDRV ++P ISC  C  C+ GR N C  ++      VH
Sbjct: 56  ILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG---VH 112

Query: 62  --GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPI 119
             G  A  +V PAD    +P+ +SL++ A+ EPL++G HA RRA +     VL++GAGPI
Sbjct: 113 RDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPI 171

Query: 120 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 179
           GL  +  A+A GA R+++VD+DD RL  A+E+GAD+ + V    +D+A  + ++    G 
Sbjct: 172 GLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLREL--TDGE 226

Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
           G DV  D  G   +M  A+     GG+V LVG+    +T P      +E+ ++G      
Sbjct: 227 GADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATR 286

Query: 240 T-WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 287
             +P  ++LL SGK+D + L+THRF F   +V EAF+   A  G  IKV+
Sbjct: 287 EDFPDVIDLLESGKVDPEALITHRFPFE--DVPEAFDLWEAPPGGVIKVL 334

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  182 bits (464), Expect = 2e-56
 Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 15/252 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AGV+ +VG  V  +  GDRV + P + C  C+ C+                 +
Sbjct: 31  LILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE-----LCPGGGILGEGL 85

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGVHACRRAN-IGPETNVLIMGAGP 118
            G  A  VV PAD    LPD +SLEE A+  EPL+   HA RRA  + P   VL++GAG 
Sbjct: 86  DGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG 145

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +GL+    A+A GA R+++ D  D +L +AKE+GAD+++             E+++   G
Sbjct: 146 VGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED-----LEEELRLTGG 199

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY 237
            G DV  D  G  +T++ AL     GG++ +VG          L     +E+ ++G    
Sbjct: 200 GGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGG 259

Query: 238 -KNTWPLCLELL 248
            +  +   L+LL
Sbjct: 260 TREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  175 bits (447), Expect = 5e-53
 Identities = 93/293 (31%), Positives = 155/293 (52%), Gaps = 16/293 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE  G + +VGSEV     GDRV+ E  I C  C +C+ GR +LC   K      V
Sbjct: 59  MVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG---V 115

Query: 61  H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGP 118
           +  G+ A  +V PA   +K+PD++  +  A+ +P    VH     ++  E  VLI GAGP
Sbjct: 116 NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGP 174

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           IG++    A+  GA  +VI DV++YRL +A+++GA   V V+   +D+ + + ++   M 
Sbjct: 175 IGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAEL--GMT 230

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
            G DV  + +G        L     GG++ ++G+   +M +       + + + G++  +
Sbjct: 231 EGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGRE 290

Query: 239 --NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
              TW     LL+SG +D+ P++THRF     + ++ FE   R G + KV+ +
Sbjct: 291 MFETWYKMSALLQSG-LDLSPIITHRFPI--DDFQKGFEA-MRSGQSGKVILD 339

Length = 341

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  174 bits (444), Expect = 6e-53
 Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 15/257 (5%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           V+GHE +G I +VG +V+    GDRV  E    +C RC +C+ G YNLCP  K   T   
Sbjct: 58  VLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ-A 116

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIMGAGPI 119
            G  A  V+ P +   +LP+N+SLE  A+ EPL+V VHA   R+ I P   V++ G GPI
Sbjct: 117 DGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPI 176

Query: 120 GLVTMLAARAFGAPRIVIVDV--DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
           GL+    A+  GA  +V+V    D+ RL VAKE+GAD    V+   +D+AE V +I    
Sbjct: 177 GLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGAD---AVNGGEEDLAELVNEITD-- 230

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVF 235
           G G DV  +C+G    +  AL     GG++  VG+        +    +  +E+ V+G  
Sbjct: 231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLA-ASIDVERIIQKELSVIGSR 289

Query: 236 RYKNT-WPLCLELLRSG 251
                 W   L LL SG
Sbjct: 290 SSTPASWETALRLLASG 306

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  171 bits (436), Expect = 1e-51
 Identities = 97/295 (32%), Positives = 158/295 (53%), Gaps = 16/295 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--TP 58
            V+GHE AG +  +G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F   T 
Sbjct: 57  QVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD 116

Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGP 118
              G  A   V PA   +K P ++  E   + EPL   VH      I  ++ VL+ GAGP
Sbjct: 117 ---GCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLAGPISGKS-VLVTGAGP 172

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           IGL+ +  A+A GA  +++ D ++YRL +AK++GA  +V      +D+ +EV  +    G
Sbjct: 173 IGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADL--TDG 228

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFRY 237
            G+DV  + +G  K +   L A   GG+V L+G+   ++T+  T   + + + + G+   
Sbjct: 229 EGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR 288

Query: 238 K--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
               TW     L++SGK+D+ P++TH+F F   + E+ FE   R G   KV+ +L
Sbjct: 289 HMFETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFE-LMRSGQTGKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  171 bits (435), Expect = 3e-51
 Identities = 95/295 (32%), Positives = 152/295 (51%), Gaps = 17/295 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++ GHE AG + +VG  V  +  GD V+ E  I C +C  C+ G Y++C   K      V
Sbjct: 59  LIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG---V 115

Query: 61  H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGP 118
              G  A  VV P +  +K   ++  E  ++ EPL   VH     ++    +VLI G GP
Sbjct: 116 DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGP 174

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           IGL+ +  A+A GA  ++  D + YRL +AK++GAD ++      +D+  EV+ +    G
Sbjct: 175 IGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVTD--G 229

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFRY 237
           TG+DV  + +G  K +   L A   GG+V ++G+    + + L    + + + V G+   
Sbjct: 230 TGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR 289

Query: 238 K--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
           K   TW     LL+SGK+D+ P++TH+     ++ EEAFE   R G   KV+   
Sbjct: 290 KMFETWYQVSALLKSGKVDLSPVITHKLPL--EDFEEAFEL-MRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  169 bits (431), Expect = 1e-50
 Identities = 95/296 (32%), Positives = 142/296 (47%), Gaps = 18/296 (6%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFA 56
           M++GHE  G + +VGS+VK L PGDRV++     C RC  C+ G +  C       K   
Sbjct: 56  MILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN 115

Query: 57  TPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
                G  A  V  P AD+   K+PD +  E+  M  + L  G H    A I P + V +
Sbjct: 116 RID--GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAV 173

Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +GAGP+GL  +  AR  GA RI+ VD +  RL +AKE GA +I  ++    DI E++ ++
Sbjct: 174 IGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDI--INPKNGDIVEQILEL 231

Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDV- 231
               G G+D   +  G  +T   A+     GG +  VG+ G  +    L     + +   
Sbjct: 232 TG--GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFK 289

Query: 232 VGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKV 286
            G+   +   P  L+L+  GKID   L+THRF      + +A+     +    IKV
Sbjct: 290 TGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDD--ILKAYRLFDNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  167 bits (426), Expect = 6e-50
 Identities = 95/299 (31%), Positives = 147/299 (49%), Gaps = 24/299 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++ GHE AGV+  VG  V     GDRV +   + C  C +C+ G   LC   +       
Sbjct: 56  VIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNR 115

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV----HACRRANIGPETNVLIMGA 116
            G  A  ++ P      LPD++S  +GA+   L  G+    HA RR  +     VL++GA
Sbjct: 116 DGGHAEYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLVVGA 172

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           GP+GL  ++ ARA GA  ++ VD    RL +AK +GAD ++      QD  +E+ ++   
Sbjct: 173 GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINS---GQDDVQEIRELTS- 228

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV---REVDVVG 233
            G G DV+ +C+G       AL A    G++ LVG G     + +  +     ++  ++G
Sbjct: 229 -GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGG---ELTIEVSNDLIRKQRTLIG 284

Query: 234 VFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
            + Y +   +  C E L   K++V  LVTHRFG  Q    EA+   A+G +  KV+F  
Sbjct: 285 SW-YFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQ--APEAYALFAQGES-GKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  158 bits (403), Expect = 1e-46
 Identities = 94/292 (32%), Positives = 141/292 (48%), Gaps = 15/292 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG + +VG+ V     GDRVA+   I C  C  C+ GR NLC          +
Sbjct: 58  LTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GI 116

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHAC-RRANIGPETNVLIMGAGP 118
            G  A  +V PA     +PD V   + A   + +    HA  R   + P   VL++G G 
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG 176

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +GL  +  A+A GA  ++ VD+ + +L +AKE+GAD   +V  +L D     +K    +G
Sbjct: 177 LGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGAD---EVLNSLDDSP--KDKKAAGLG 230

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 237
            G DV FD  G   T   A  A   GG++ +VG+G  ++TV L+    RE+ ++G F   
Sbjct: 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGT 290

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
               P  L+L+  GK+D  P V  R      E+ E  E   +G    +V+  
Sbjct: 291 PEDLPEVLDLIAKGKLD--PQVETR---PLDEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  157 bits (400), Expect = 4e-46
 Identities = 91/290 (31%), Positives = 136/290 (46%), Gaps = 15/290 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---- 56
           MV+GHE  G I    S+   L  G  VA+ P   C  C +C     N C  M+FF     
Sbjct: 61  MVLGHEVIGKIVH--SDSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMY 118

Query: 57  TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 116
            P V G      V     C   P+    +  A  EPL+V +HA  +A       V + G 
Sbjct: 119 FPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGV 178

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           GPIG + + A +  GA  IV  DV    LS+A+E+GAD +V    N Q+  ++++  +  
Sbjct: 179 GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV----NPQN--DDLDHYKAE 232

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 236
            G   DVSF+ +G   +++T L  T A G +  VGMG      P+    V+E+ + G FR
Sbjct: 233 KGY-FDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFR 291

Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
           +   +   +  L +G I+  PL++  + F+   +EEA   +     A KV
Sbjct: 292 FTEEFNTAVSWLANGVINPLPLLSAEYPFTD--LEEALIFAGDKTQAAKV 339

Length = 343

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  157 bits (400), Expect = 8e-46
 Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 53/317 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
            V+GHE AG++E VG  V ++ PGD V L     C +C  C  G+ NLC      AT   
Sbjct: 57  AVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLC--EAIRATQGK 114

Query: 58  ---------------PPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV- 97
                          P  H     + A   V       K+  +  LE+      L  GV 
Sbjct: 115 GTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKAC---LLGCGVT 171

Query: 98  ----HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
                    A + P   V + G G +GL  +  A+A GA RI+ VD++  +L +AK+ GA
Sbjct: 172 TGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGA 231

Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213
            + V    N +++ + VE I +    G D +F+C G  + M  AL AT  GG   ++G+ 
Sbjct: 232 THFV----NPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVA 287

Query: 214 HHEMTVPLTPAAVREVDVVGVFRYKNTW----------PLCLELLRSGKIDVKPLVTHRF 263
                +   P       +V    +K +           P  ++L  +GK+ +  LVTH  
Sbjct: 288 GAGQEISTRP-----FQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTI 342

Query: 264 GFSQKEVEEAFETSARG 280
               +++ EAF+    G
Sbjct: 343 PL--EDINEAFDLMHEG 357

Length = 366

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  152 bits (386), Expect = 5e-44
 Identities = 95/296 (32%), Positives = 145/296 (48%), Gaps = 18/296 (6%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP 58
           V+GHE  G + +VG EV+TL  GDRV     I+C  C +C+ G+   C +   F    +P
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP 115

Query: 59  PVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-AMCEPLSVGVHACRRANIGPETNVLIMG 115
            + G+ A  V  P AD    KLPD +S E    + + L  G    +RA + P   V ++G
Sbjct: 116 NLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIG 175

Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
            GP+GL  +L+A+  GA R+  VD    RL  A  +GA+ I     N +D AE VE++++
Sbjct: 176 CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEPI-----NFED-AEPVERVRE 229

Query: 176 AM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDV-V 232
           A  G G DV  +  G    +  A      GG +  VG+    E   P   A  + + +  
Sbjct: 230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF 289

Query: 233 GVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288
           G    ++ +P  L LL SG++D++ L+ HR      E  EA+    +    +KV+ 
Sbjct: 290 GRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLE--EAPEAYRLFDK-RKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  151 bits (384), Expect = 2e-43
 Identities = 92/313 (29%), Positives = 132/313 (42%), Gaps = 39/313 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE------MKF 54
            V+GHE AGV+E+VG  V  + PGD V L    +C  C +C  G+ NLC         + 
Sbjct: 55  AVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL 114

Query: 55  FATPPVH-------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---- 97
                               G+ A   V P     K+ D++ L+  A+   L  GV    
Sbjct: 115 PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGCGVTTGV 171

Query: 98  -HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156
                 A + P   V ++G G +GL  +  AR  GA RI+ VD    +L +A+  GA + 
Sbjct: 172 GAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHT 231

Query: 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE 216
           V  S    D  E V  +    G G D +F+  G   T+  AL  T  GG   +VGMG   
Sbjct: 232 VNASE--DDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG 287

Query: 217 MTVPLTPA--AVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 270
            TV L      + E  + G        +   P  L+L R+G++ +  LVT R+   +  +
Sbjct: 288 ETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDE--I 345

Query: 271 EEAFETSARGGTA 283
            EAF     G  A
Sbjct: 346 NEAFADMLAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  149 bits (379), Expect = 6e-43
 Identities = 95/291 (32%), Positives = 148/291 (50%), Gaps = 12/291 (4%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++GHE  GV+E+VGS V     GDRV +    SC  C +C+ G Y+ C    +     + 
Sbjct: 57  ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLID 116

Query: 62  GSLANQVVHP-ADLC-FKLPDNVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLIMGAG 117
           G+ A  V  P AD   +KLP+ V  E   M   +    + C      + P   V I+GAG
Sbjct: 117 GTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAG 176

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
           P+GL  +L A+ +   +I++VD+DD RL VAK++GA + V  +    D  E+V ++    
Sbjct: 177 PVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD-- 232

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 237
           G G+DV  +  G+  T          GG +  VG+    + + L    ++ + +      
Sbjct: 233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD 292

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT--AIKV 286
            NT P+ L+L+ SGK+D   LVTHRF  S  E+E+A++T +      A+KV
Sbjct: 293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLS--EIEKAYDTFSAAAKHKALKV 341

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  149 bits (379), Expect = 6e-43
 Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 31/285 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPP 59
           ++ GHE  G + +VG  V  L  GDRV +    ISC  C++C+ G  NLCP  +      
Sbjct: 59  LIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN-QKITGYT 117

Query: 60  VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRANIGPETNVLIMG 115
             G  A  VV PA    K+P+ + L E A   PL   G+    A ++AN+ P   V ++G
Sbjct: 118 TDGGYAEYVVVPARYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVG 174

Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
           AG +G + +  A+A GA  ++ +   + +L +AK++GAD++  ++++  D  E V++I  
Sbjct: 175 AGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV--INSSDSDALEAVKEI-- 229

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVG 233
                 D   D  G   T+  +L A   GG + LVG+  G     +P     ++E+ +VG
Sbjct: 230 -----ADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVG 283

Query: 234 --VFRYKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 275
             V    +      E L  + +  +KP +         E+ EA+E
Sbjct: 284 SLVGTRADL----EEALDFAAEGKIKPEILETIPLD--EINEAYE 322

Length = 339

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  146 bits (369), Expect = 2e-41
 Identities = 87/291 (29%), Positives = 154/291 (52%), Gaps = 11/291 (3%)

Query: 1   MVIGHECAGVIEKVGSEVKT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-T 57
           M+ GHE  G + ++G   +   +  GDRV  E  + CW C  C  G+Y +C +   +   
Sbjct: 64  MIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQ 123

Query: 58  PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 116
             V+G +A  +  P + +  K+PD++  E+  + EPL+  +HA  RANI  +  V++ GA
Sbjct: 124 NNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGA 183

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           GP+GL  + AAR     +++++D+ D RL++A++ GAD ++       D+ E+++++   
Sbjct: 184 GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE--VDVVEKIKELTG- 240

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR-EVDVVGVF 235
            G G D+  +  G    +   L      G+     +    +TV  +    R E+DV+G  
Sbjct: 241 -GYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSH 299

Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
                +P+ ++L+ SG++    +VTH+  F  ++ EEAFE  ARG  +IKV
Sbjct: 300 LGPYCYPIAIDLIASGRLPTDGIVTHQ--FPLEDFEEAFELMARGDDSIKV 348

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  143 bits (364), Expect = 1e-40
 Identities = 92/292 (31%), Positives = 130/292 (44%), Gaps = 28/292 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  GV+E+VGSEVK   PGDRV +      WR    + G  +    M    KF  
Sbjct: 55  MILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF-- 112

Query: 57  TPPVHGSLANQV-VHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
           +    G  A    V+ AD     LPD ++ E+  M  + +S G H    ANI     V +
Sbjct: 113 SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAV 172

Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
            G GP+GL+ +  AR  GA RI+ V     R+ +AKE GA +IV       D+ E++ K+
Sbjct: 173 FGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKL 230

Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233
               G G+D      G   T   AL     GG +  V     +  +P+     RE   VG
Sbjct: 231 TG--GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPI----PREEWGVG 284

Query: 234 VFRYKNTWPLC----------LELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
           +        LC            L+  G++D   L+TH F F   ++EEA  
Sbjct: 285 MGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHF-FGFDDIEEALM 335

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  142 bits (361), Expect = 3e-40
 Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 28/290 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             +GHE AG +E+VGS V  L  GD V + P   C  C +C+ G  N C   +F   P +
Sbjct: 59  FTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGI 115

Query: 61  --HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRAN--IGPETNVL 112
              G  A  ++ P+    KLP  +   E A   PL+  G+   HA ++A   + P + V+
Sbjct: 116 GTDGGFAEYLLVPSRRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVV 172

Query: 113 IMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
           ++G G +G + +   RA     ++ VD  +  L +A+ +GAD+++  S    D+ EEV +
Sbjct: 173 VIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD---DVVEEVRE 229

Query: 173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 232
           +    G G D   D  G ++T++ A      GG+  +VG G H   +P +     E+ V+
Sbjct: 230 LTG--GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVI 286

Query: 233 GVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
           G           + + L  SGK+  K  +T    F  ++  EA +    G
Sbjct: 287 GSLWGTRAELVEV-VALAESGKV--KVEITK---FPLEDANEALDRLREG 330

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  142 bits (359), Expect = 7e-40
 Identities = 92/314 (29%), Positives = 135/314 (42%), Gaps = 40/314 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 54
           +++GHE  G +  +G  V T      L  GDRV    G  C RC  C  G    C   K 
Sbjct: 56  IILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK 115

Query: 55  F------ATPPVHGSLANQVVHPADLCF-KLPDNVSLE--EGAMCEPLSVGVHACRRAN- 104
           +        P + G  A  +  P      ++PDNV  E    A C  L+  + A  RA  
Sbjct: 116 YGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGP 174

Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 164
           +G    V++ GAGP+GL  + AA+  GA R++++D    RL +A+E GAD  + +     
Sbjct: 175 VGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE--- 231

Query: 165 DIAEEVEKIQKAM----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 220
               + ++         G G DV  + +G    +   L     GG   LVG      TVP
Sbjct: 232 --LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVP 289

Query: 221 LTPAAV--REVDVVGVFRYKNTWPLCL----ELLR--SGKIDVKPLVTHRFGFSQKEVEE 272
           L P  +  + + ++GV  Y    P  L      L     +     LVTHR  +  +++ E
Sbjct: 290 LDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHR--YPLEDINE 344

Query: 273 AFETSARGGTAIKV 286
           A E  A  GTA+KV
Sbjct: 345 ALE-LAESGTALKV 357

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  140 bits (355), Expect = 2e-39
 Identities = 82/290 (28%), Positives = 128/290 (44%), Gaps = 20/290 (6%)

Query: 2   VIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           V+GHE  G +   G    + L  G RV   P + C +   C  G     P          
Sbjct: 66  VLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAP---------- 115

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A  ++    L  ++PD +S+E+ A+ EPL+VG+HA RRA + P    L++G GPIG
Sbjct: 116 -GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIG 174

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L  + A +A G   IV  D    R ++A  +GAD +V  + +    A   E  +      
Sbjct: 175 LAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKP 234

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA--VREVDVVGVFRY- 237
             V F+C G    +   +     GG++ +VG+     +  + PA    +E+ +     Y 
Sbjct: 235 -AVIFECVGAPGLIQQIIEGAPPGGRIVVVGV--CMESDNIEPALAIRKELTLQFSLGYT 291

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 287
              +   L+ L  GK+DV P+VT   G     V +AFE         K++
Sbjct: 292 PEEFADALDALAEGKVDVAPMVTGTVGLD--GVPDAFEALRDPEHHCKIL 339

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  141 bits (357), Expect = 2e-39
 Identities = 99/337 (29%), Positives = 148/337 (43%), Gaps = 61/337 (18%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PEMK- 53
            ++GHE  GV+E+VG EV+ L  GDRV +   I+C  C +CK G Y+ C       EM  
Sbjct: 56  DILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK 115

Query: 54  --------FF----ATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGVH 98
                    F     T    G  A  V  P AD+  FK+PD++S E+   + + L  G H
Sbjct: 116 LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYH 175

Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIV 157
           A   A + P   V + G GP+GL    +A+  GA R++ +D    RL +A+  +GA+ I 
Sbjct: 176 AAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235

Query: 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG-------LNKTMSTALG----------- 199
                + D+ E + ++    G G DV  D  G       L+K     L            
Sbjct: 236 F--EEVDDVVEALRELTG--GRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALRE 291

Query: 200 ---ATCAGGKVCLVG--MGHHEMTVPLTPAAVREVDVVG----VFRYKNTWPLCLELLRS 250
              A   GG V ++G   G      P+  A  + + +      V RY    P  LEL+ S
Sbjct: 292 AIQAVRKGGTVSIIGVYGGTVN-KFPIGAAMNKGLTLRMGQTHVQRY---LPRLLELIES 347

Query: 251 GKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKV 286
           G++D   ++THR      +  EA++    +    IKV
Sbjct: 348 GELDPSFIITHRLPLE--DAPEAYKIFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  140 bits (354), Expect = 3e-39
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 24/276 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE +G +E VGS V  L PGD VA  P + C+ C  C  G Y+LC +  F  +   
Sbjct: 55  ITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRD 114

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+    VV   +L F LP ++ +E+GA  EP++VG+HA   A      NV+I+GAG IG
Sbjct: 115 GGNAEYIVVKRKNL-FALPTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIG 173

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+ +  A A GA  +  +D++  +L++AK +GA        N ++++    +IQ  +   
Sbjct: 174 LLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTF----NSREMS--APQIQSVLR-- 225

Query: 181 IDVSFD-----CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV---REVDVV 232
            ++ FD      AG+ +T+  A+       ++ LVG  HH++ +          +E+ V+
Sbjct: 226 -ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVI 284

Query: 233 GVF-RYKNTWP-----LCLELLRSGKIDVKPLVTHR 262
           G +  Y + WP         LL   K+ ++PL+ HR
Sbjct: 285 GSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  138 bits (349), Expect = 3e-38
 Identities = 94/323 (29%), Positives = 135/323 (41%), Gaps = 56/323 (17%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KFFAT 57
            V+GHE AGV+E VGS V  L PGD V L    SC  C +C  G    C       F   
Sbjct: 57  AVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGR 115

Query: 58  -------------PPVHG------SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 98
                         PVHG      S A   V       K+  +V LE  A   PL  G+ 
Sbjct: 116 RPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLA---PLGCGIQ 172

Query: 99  A-----CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
                        P +++ + GAG +GL  ++AA+  G   I+ VD+ D RL +AKE+GA
Sbjct: 173 TGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232

Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213
            +++      +D+   V  I++  G G+D + D  G+   +  A+ A    G + LVG  
Sbjct: 233 THVINPKE--EDL---VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAP 287

Query: 214 --HHEMTVPLTPAAVREVDVVGV---------FRYKNTWPLCLELLRSGKIDVKPLVTHR 262
               E+T+ +    V    + GV         F      P  +EL R GK     LVT  
Sbjct: 288 PPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEF-----IPRLIELYRQGKFPFDKLVTF- 341

Query: 263 FGFSQKEVEEAFETSARGGTAIK 285
             +  +++ +A   S  G   IK
Sbjct: 342 --YPFEDINQAIADSESGKV-IK 361

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  135 bits (343), Expect = 7e-38
 Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 26/282 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE  G +E+VG  V+   PGDRV L   I C +C++C  G  NLC     +    V
Sbjct: 56  LILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EV 114

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGP 118
            G  A  V  P     KLPDNVS E  A   C  +   VHA +RA +     VL+ GAG 
Sbjct: 115 DGGFAEYVKVPERSLVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGG 173

Query: 119 ---IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
              I  + +  A+A GA R++ V     +L + KE+GAD ++  S      +E+V+K+  
Sbjct: 174 GVGIHAIQL--AKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-- 224

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 234
               G DV  +  G + T+  +L +   GG++ L+G +      +      ++E+ ++G 
Sbjct: 225 ---GGADVVIELVG-SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGS 280

Query: 235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
               K      L+L++ GKI  KP++          + EA E
Sbjct: 281 ISATKADVEEALKLVKEGKI--KPVIDRVVSLED--INEALE 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  132 bits (335), Expect = 2e-36
 Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 44/289 (15%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP-- 59
           V GHE AGV+ +VG +V     GDRV +   + C  C +C+ G  N+C         P  
Sbjct: 57  VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQ----VQPGF 112

Query: 60  -VHGSLANQV-VHPADL-CFKLPDNVSLEEGAMCEPLSVGVHACR----------RANIG 106
              GS A  V V  AD+   +LPD+V     A      +G   CR          +A + 
Sbjct: 113 THPGSFAEYVAVPRADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVK 164

Query: 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 166
           P   V + G G +GL  ++ A A GA R++ VD+DD +L +A+E+GA   V  ++ ++D+
Sbjct: 165 PGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDV 222

Query: 167 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTP 223
           A  V  +    G G  VS D  G+ +T   ++ +    G+   VG+       + +P+  
Sbjct: 223 AAAVRDL---TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDR 279

Query: 224 AAVREVDVVGVF-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 267
              RE+++VG       RY       L L+ SGK+D +PLV       +
Sbjct: 280 VVARELEIVGSHGMPAHRY----DAMLALIASGKLDPEPLVGRTISLDE 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  129 bits (327), Expect = 3e-35
 Identities = 84/314 (26%), Positives = 134/314 (42%), Gaps = 39/314 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE AG++E +G  V TL PGD+V    G  C +C  C   R NLC   K   T   
Sbjct: 55  VILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLC--SKSRGTNGR 112

Query: 59  ---------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVG 96
                          P+H      + A   V       K+  +  LE+  +  C   S G
Sbjct: 113 GLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG-FSTG 171

Query: 97  VHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155
             A    A + P +   + G G +GL  ++  +A GA RI+ VD++  +   AK++GA  
Sbjct: 172 YGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATE 231

Query: 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGH 214
            +      + I   VE + +    G+D +F+  G   T+  AL AT   GG   +VG+  
Sbjct: 232 CINPRDQDKPI---VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPP 288

Query: 215 HEMTVPLTPAAVRE-----VDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 269
                 L P  +         V G ++ K++ P  + L R  K  +  L+TH   F  +E
Sbjct: 289 SGTEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EE 346

Query: 270 VEEAFETSARGGTA 283
           + + F+    G + 
Sbjct: 347 INDGFDLMRSGESI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  129 bits (325), Expect = 8e-35
 Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 18/289 (6%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           VIGHE +GV+EK G  VK    GD V  E  + C  C  C+ G  N C  +K        
Sbjct: 90  VIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SAD 148

Query: 62  GSLANQVVHPADLCFKLPDNV-------SLEEGAMCEPLSVGVHAC--RRANIGPETNVL 112
           G+ A  +   A   +++ +         + E GA+ EP SV  +    R     P   V+
Sbjct: 149 GAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVV 208

Query: 113 IMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
           + GAGPIGL  +  A+A GA +++  ++ + R ++AKE+GAD +   +          EK
Sbjct: 209 VYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEK 266

Query: 173 IQKAM-GTGIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTPAAVREVD 230
           + +   G G D+  + AG        +  + A  GK+  +G     + + L    VR   
Sbjct: 267 VMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQ 326

Query: 231 VVGVFRYKN--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 277
           +VG   +     +P  ++L+ SGKID+  ++T RF      + EA + +
Sbjct: 327 IVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLE--GIMEAIKAA 373

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  126 bits (318), Expect = 6e-34
 Identities = 94/317 (29%), Positives = 148/317 (46%), Gaps = 42/317 (13%)

Query: 2   VIGHECAGVIEKVGSEVK---TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-- 56
           V+GHE +G + +VG  V+    L  GDRV     + C +C +C  G+ NLC    FFA  
Sbjct: 56  VLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE--DFFAYN 113

Query: 57  -----------------TPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPL 93
                              PV+    G LA   V PA     LP+++   E A+  C   
Sbjct: 114 RLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGF 173

Query: 94  SVGVHACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 152
           +    A + A  + P   V ++G G +G   +  A+AFGA  I+ VDV D +L+ AKE+G
Sbjct: 174 T-AYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELG 232

Query: 153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
           A +   V+   +D    + +I    G G+DV  +  G  +T   AL     GG+  +VG+
Sbjct: 233 ATHT--VNAAKEDAVAAIREI--TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288

Query: 213 GHHEMT--VPLTPAAVREVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
                T  +P+T    R + ++G +  +     P  + L  SGK+D + LVTH++    +
Sbjct: 289 APGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--E 346

Query: 269 EVEEAFETSARGGTAIK 285
           E+ EA+E   +G    +
Sbjct: 347 EINEAYENLRKGLIHGR 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  124 bits (314), Expect = 1e-33
 Identities = 88/291 (30%), Positives = 125/291 (42%), Gaps = 30/291 (10%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V GHE  G++E+       LV G RV  E  I+C RC++C+ G Y  CP           
Sbjct: 53  VPGHEFVGIVEEGPEA--ELV-GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRD 109

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
           G+ A  +  P +    +PD V  E+    EPL+  +    +  I P   V ++G G +GL
Sbjct: 110 GAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGL 169

Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
           +        G P +V+V     +L++A+ +G      V T L D AE         G G 
Sbjct: 170 LIAQVLALTG-PDVVLVGRHSEKLALARRLG------VETVLPDEAESE-------GGGF 215

Query: 182 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV----GVFRY 237
           DV  +  G    +  AL      G V L        +  LT A V E+ +V    G F  
Sbjct: 216 DVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPF-- 273

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288
                  L LLR G +DV PL+T  +     E  EAFE +A  G  +KV+ 
Sbjct: 274 ----APALRLLRKGLVDVDPLITAVYPLE--EALEAFERAAEPGA-LKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  123 bits (310), Expect = 1e-32
 Identities = 91/311 (29%), Positives = 135/311 (43%), Gaps = 41/311 (13%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCP---------- 50
           M +GHE AGV+ +VG  V  L  GD V L    SC  C  C  GR  LC           
Sbjct: 63  MALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGT 122

Query: 51  ------EMKFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVH 98
                  ++       H     + A   V       K+  +V LE  A+  C  L+ GV 
Sbjct: 123 LLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLT-GVG 181

Query: 99  AC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
           A    A + P  +V ++G G +GL  +L A A GA ++V VD+++ +L++A+E+GA   V
Sbjct: 182 AVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATV 241

Query: 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--H 215
                       VE++++  G G+D +F+ AG    + TA   T  GG     G+     
Sbjct: 242 NAGD-----PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEA 296

Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTW------PLCLELLRSGKIDVKPLVTHRFGFSQKE 269
            ++VP       E  + G   Y  +       P  L L  SG++ V  L+THR      E
Sbjct: 297 RLSVPALSLVAEERTLKG--SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLD--E 352

Query: 270 VEEAFETSARG 280
           + E F+  A G
Sbjct: 353 INEGFDRLAAG 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  122 bits (308), Expect = 1e-32
 Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 17/280 (6%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+GHE  G +  VG +   +  GD+V + P I C  C  C  G  NLC + +       
Sbjct: 68  LVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQ- 126

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRAN-IGPETNVLIMGAG 117
            G  A  V+ P       P  +     A   C  L+    A ++   +  +  V+I+GAG
Sbjct: 127 DGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA-YSAVKKLMPLVADEPVVIIGAG 185

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +GL+ +   +A G   I++VD+D+ +L  AK  GAD +V    N  D  +  ++I KA 
Sbjct: 186 GLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVV----NGSD-PDAAKRIIKAA 240

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF-- 235
           G G+D   D    + T S A      GGK+ LVG+   E T+PL    +R + + G +  
Sbjct: 241 GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVG 300

Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
             +    L + L ++GK+   PL          +V +A +
Sbjct: 301 SLEELREL-VALAKAGKLKPIPLTER----PLSDVNDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  121 bits (305), Expect = 3e-32
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 18/279 (6%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           VIGHE  GVI+ VG  V     G+RVA++P ISC  C  C  G+ N+C  +       VH
Sbjct: 56  VIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLG---VH 112

Query: 62  --GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPI 119
             G  +   V PA    ++PD ++ +   M EP ++  +   R     +   LI GAGP+
Sbjct: 113 RDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPV 172

Query: 120 GLVTMLA-ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           GL  +      +    +++ D  D RL++AKE GAD ++  +   + + E +E+      
Sbjct: 173 GLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE------ 224

Query: 179 TGIDVS--FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 236
            GI  +   D A     +  A+       ++ L+G       +       +E+ +     
Sbjct: 225 KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL 284

Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
             N +P+ ++ L  G ID + L+TH F F  + V +A E
Sbjct: 285 NANKFPVVIDWLSKGLIDPEKLITHTFDF--QHVADAIE 321

Length = 339

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  120 bits (304), Expect = 4e-32
 Identities = 90/288 (31%), Positives = 128/288 (44%), Gaps = 34/288 (11%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++G + AGV+E VG  V  + PG RV + PGISC RC++C  GR NLC +        V 
Sbjct: 60  ILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVD 118

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--HACR-RANIGPETNVLIMGAGP 118
           G  A  V  PA     +PDN+S EE A   PL+     H    RA + P   VL+ GAG 
Sbjct: 119 GGYAEYVAVPARNLLPIPDNLSFEEAA-AAPLTFLTAWHMLVTRARLRPGETVLVHGAGS 177

Query: 119 -IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G   +  A+ FGA  I     +D +L  AKE+GAD ++      +D   EV ++    
Sbjct: 178 GVGSAAIQIAKLFGATVIATAGSED-KLERAKELGADYVIDYRK--EDFVREVRELTG-- 232

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV-----DVV 232
             G+DV  +  G   T   +L +   GG++   G      T    P  +R V      ++
Sbjct: 233 KRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCG----ATTGYEAPIDLRHVFWRQLSIL 287

Query: 233 GVF-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
           G                L L+  GK+  KP++   F     E  EA  
Sbjct: 288 GSTMGTKAELDEA----LRLVFRGKL--KPVIDSVFPLE--EAAEAHR 327

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  120 bits (304), Expect = 5e-32
 Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 29/300 (9%)

Query: 3   IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
           IGHE  GV+E+VGSEV ++ PGD V     IS   C  C+ G    C    F+    V G
Sbjct: 57  IGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFW-GAFVDG 115

Query: 63  SLANQVVHP-AD-LCFKLPDNVSLEEG------AMCEPLSVGVHACRRANIGPETNVLIM 114
                V  P AD    K+P + S +E       A+ + +  G HA   A + P + V+++
Sbjct: 116 GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVV 175

Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
           G G +GL  +LAA+  GA RI+ +   + R ++A+E GA +IV      +   E V ++ 
Sbjct: 176 GDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVA-----ERGEEAVARV- 229

Query: 175 KAM--GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 232
           + +  G G D   +C G  ++M  A+     GG+V  VG+ H  + + +     R V + 
Sbjct: 230 RELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLA 289

Query: 233 G----VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 287
           G    V RY    P  L+ + +G+I+   +          EV E +     R   AIKV+
Sbjct: 290 GGPAPVRRYL---PELLDDVLAGRINPGRVFDLTLPLD--EVAEGYRAMDER--RAIKVL 342

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  117 bits (295), Expect = 5e-31
 Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 43/291 (14%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           GHE  G +  +G  V+ L  GDRVA   G                             G+
Sbjct: 56  GHEGWGRVVALGPGVRGLAVGDRVAGLSG-----------------------------GA 86

Query: 64  LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVT 123
            A   +  AD    LP      +    EPL   ++  RR  I     V ++GAG IGL+ 
Sbjct: 87  FAEYDLADADHAVPLPSL-LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLF 145

Query: 124 MLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 183
           +  A A GA R++ +D    RL++A+E+GA  +V   +  + I E V ++    G G DV
Sbjct: 146 LQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EAIVERVRELTG--GAGADV 201

Query: 184 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVG-VFR----Y 237
             +  G    +  A       G++ + G        VP      + +D++  V R     
Sbjct: 202 VIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIG 261

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVM 287
                  ++L+  G++D+  L+TH F    +E+ +AFE + R     IK +
Sbjct: 262 LEGMREAVKLIADGRLDLGSLLTHEFPL--EELGDAFEAARRRPDGFIKGV 310

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  116 bits (293), Expect = 5e-31
 Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 64/303 (21%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
             G+   G + +VGS V    PGDRV                                  
Sbjct: 23  PPGYSSVGRVVEVGSGVTGFKPGDRVF-------------------------------CF 51

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
           G  A +VV PA+L   LPD +  E  A+    +  ++  R A       V ++G G +GL
Sbjct: 52  GPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGL 111

Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
           +    A+A GA  +V VD D  R  +A+ +G  + V       D A+E+       G G 
Sbjct: 112 LAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVA-----ADTADEI------GGRGA 160

Query: 182 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV-----GVFR 236
           DV  + +G    + TAL      G+V LVG    +  +       + + +      G+ R
Sbjct: 161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGR 220

Query: 237 YKNTWP----------LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIK 285
           Y    P            L+LL  G+++   L+THR  F   +  EA+          +K
Sbjct: 221 Y--DRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFE--DAPEAYRLLFEDPPECLK 274

Query: 286 VMF 288
           V+ 
Sbjct: 275 VVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  114 bits (287), Expect = 1e-29
 Identities = 79/289 (27%), Positives = 121/289 (41%), Gaps = 32/289 (11%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFA 56
           V GHE  G + +VG+ V+    GDRV    G+     SC RC++C+ G  NLC +     
Sbjct: 56  VPGHEIVGEVVEVGAGVEGRKVGDRV----GVGWLVGSCGRCEYCRRGLENLCQKAVN-- 109

Query: 57  TPPVH-GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI 113
           T     G  A  +V  A+    LPD + L + A  +C  ++V   A R A   P   V +
Sbjct: 110 TGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAV 168

Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +G + +  ARA G    V +     +  +A+++GAD +V         +      
Sbjct: 169 LGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVD--------SGAELDE 219

Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVV 232
           Q A G G DV             ALG    GG++ LVG+      +  + P  ++   + 
Sbjct: 220 QAAAG-GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIA 278

Query: 233 GVFRYKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
           G            E L  + +  VKP +   F   Q    EA+E   +G
Sbjct: 279 GS--THGGRADLQEALDFAAEGKVKP-MIETFPLDQ--ANEAYERMEKG 322

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  113 bits (284), Expect = 5e-29
 Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 42/316 (13%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++GHE AG++E VG  V  L PGD+V +   I  C  C +C+ G+ NLC + +   +   
Sbjct: 58  ILGHEGAGIVESVGEGVTNLKPGDKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESGLM 116

Query: 59  ------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH--- 98
                        ++      + +   V   +   K+     LE   +   L  G     
Sbjct: 117 PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCL---LGCGFSTGY 173

Query: 99  --ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156
             A   A + P + V + G G +GL  ++ A+  GA RI+ VD+++ +   AKE GA + 
Sbjct: 174 GAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDF 233

Query: 157 VKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGH 214
           +    N +D  + V E I++  G G+D SF+C G    M+ AL +T  G G   +VG+  
Sbjct: 234 I----NPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP 289

Query: 215 --HEMTVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 270
                  P      R       G F+ ++  P  +    + K D+  L+TH   F  +E+
Sbjct: 290 GAELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEI 347

Query: 271 EEAFETSARGGTAIKV 286
            + F+   + G  I+ 
Sbjct: 348 NKGFDL-MKSGECIRT 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  111 bits (281), Expect = 9e-29
 Identities = 88/293 (30%), Positives = 129/293 (44%), Gaps = 32/293 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFF 55
           ++ GHE AGV+  VG  V  L  GDRV    G+     +C +C++C+ G   LCP  K  
Sbjct: 58  LIGGHEGAGVVVAVGPGVSGLKVGDRV----GVKWLYDACGKCEYCRTGDETLCPNQK-N 112

Query: 56  ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI 113
           +   V G+ A   +  A     +PD +S E+ A  +C  ++V   A ++A + P   V+I
Sbjct: 113 SGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLKPGDWVVI 171

Query: 114 MGAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
            GAG  G +  L    A+A G  R++ +DV D +L +AKE+GAD  V       D  E V
Sbjct: 172 SGAG--GGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAV 226

Query: 171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--RE 228
           +++    G G       A        AL     GG +  VG+      +PL P  +  R 
Sbjct: 227 KEL--TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGF-IPLDPFDLVLRG 283

Query: 229 VDVVGVFRYKNTW-PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
           + +VG            LE    GK  VKP +          + E FE    G
Sbjct: 284 ITIVGSLVGTRQDLQEALEFAARGK--VKPHIQ-VVPLED--LNEVFEKMEEG 331

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  110 bits (278), Expect = 2e-28
 Identities = 78/292 (26%), Positives = 119/292 (40%), Gaps = 45/292 (15%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            + G E AGV+  VGS V     GDRVA                                
Sbjct: 59  FIPGSEAAGVVVAVGSGVTGFKVGDRVA-------------------------ALGGVGR 93

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-G 117
            G  A  VV PAD    LPD +S EE A      L+  +    RA + P   VL+ GA G
Sbjct: 94  DGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAG 153

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G   +  A+A GA  + +V   + +L + KE+GAD+++      +D  E+V ++    
Sbjct: 154 GVGSAAIQLAKALGATVVAVVSSSE-KLELLKELGADHVINYRE--EDFVEQVRELTG-- 208

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVF 235
           G G+DV  D  G   T + +L A   GG++  +G   G   + + L P   + + + GV 
Sbjct: 209 GKGVDVVLDTVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT 267

Query: 236 RYKNTWPL-------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
                            +LL SGK+  KP++   +  ++     A     R 
Sbjct: 268 LGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERR 317

Length = 326

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 2e-27
 Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 24/281 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE  G +E+VG  VK   PGDRVA         C++C+ G    C     +    +
Sbjct: 56  VILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-EL 114

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEP--LSVGVHACRRANIGPETNVLIMGA-G 117
            G  A           K+P NVS +EGA+  P    +     RRA +     VL+ GA G
Sbjct: 115 DGFFAEYAKVKVTSLVKVPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGG 173

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G+  +  A+A GA +++ V   + +  +  +  AD ++  S      +EEV+KI    
Sbjct: 174 GVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGSK----FSEEVKKIG--- 224

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVF 235
             G D+  +  G   T+  +L +   GGK+  +G      T  L    +  ++++++G  
Sbjct: 225 --GADIVIETVG-TPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHI 281

Query: 236 R-YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
              K      L+L+  GKI  KP++      S  E+++A E
Sbjct: 282 SATKRDVEEALKLVAEGKI--KPVIGAEVSLS--EIDKALE 318

Length = 334

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  108 bits (272), Expect = 3e-27
 Identities = 82/308 (26%), Positives = 131/308 (42%), Gaps = 44/308 (14%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------- 54
           ++GHE AG++E VG  V  L PGD V       C  C HCK  + N+C  ++        
Sbjct: 59  ILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVM 118

Query: 55  -------FAT--PPVHGSLANQ------VVHPADLCFKLPDNVSLEEGAMCEPLSVGVH- 98
                  F+    P++  +         VVH   +  K+     L++  +   LS GV  
Sbjct: 119 INDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVA-KINPEAPLDKVCL---LSCGVST 174

Query: 99  ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154
               A   A +   + V I G G +GL     AR  GA RI+ VD++  +   AK+ G  
Sbjct: 175 GLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVT 234

Query: 155 NIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM 212
             V    N +D  + V+++   M G G+D SF+C G    M +A      G G   L+G+
Sbjct: 235 EFV----NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGV 290

Query: 213 GHHEMTVPLTPAAV-REVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 267
            H +      P  +     + G      + K   P  +E     +++++  +TH   FS 
Sbjct: 291 PHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS- 349

Query: 268 KEVEEAFE 275
            E+ +AF+
Sbjct: 350 -EINKAFD 356

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 95.8 bits (239), Expect = 6e-25
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AG++E+VG  V  L  GDRV + P I C +C  C+ GR NLCP  KF     +
Sbjct: 32  LILGHEGAGIVEEVGPGVTGLKVGDRVVVYPLIPCGKCAACREGRENLCPNGKFLGV-HL 90

Query: 61  HGSLANQVVHPADLCFKL 78
            G  A  VV PA     L
Sbjct: 91  DGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 95.8 bits (239), Expect = 1e-24
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 6/133 (4%)

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +GL  +  A+A GA R++ VD  + +L +AKE+GAD+++      +D  E V ++    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTG-- 56

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFR 236
           G G+DV  DC G   T+  AL     GG+V +VG+ G   +  PL    ++E+ ++G   
Sbjct: 57  GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLG 116

Query: 237 YK-NTWPLCLELL 248
                +   LELL
Sbjct: 117 GGREEFEEALELL 129

Length = 131

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  100 bits (252), Expect = 1e-24
 Identities = 74/297 (24%), Positives = 116/297 (39%), Gaps = 50/297 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFF 55
           +V GHE  G++  VGS+V     GDRV    G+     SC  C+ CK G    CP+    
Sbjct: 55  LVPGHEIVGIVVAVGSKVTKFKVGDRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVT 110

Query: 56  ATPPV------HGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACR 101
                       G  A+ +V      FK+P+ +     A  +C       PL       +
Sbjct: 111 YNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------K 163

Query: 102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 161
           R  +GP   V ++G G +G + +  A+A GA  +        +   A ++GAD  +    
Sbjct: 164 RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFI---- 218

Query: 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL 221
                 ++ E ++KA G+ +D+  D    +  +   L     GG + LVG     + VP 
Sbjct: 219 ----ATKDPEAMKKAAGS-LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPP 273

Query: 222 TPAAVREVDVVGVF--RYKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 275
            P       V G      K T     E+L  + +  +KP V          + EA E
Sbjct: 274 FPLIFGRKSVAGSLIGGRKET----QEMLDFAAEHGIKPWVEV---IPMDGINEALE 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  100 bits (251), Expect = 2e-24
 Identities = 68/204 (33%), Positives = 97/204 (47%), Gaps = 21/204 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM-------- 52
           +V+GHE  G +E+VGS V++L  GDRV +   ++C RC +CK G   +C  +        
Sbjct: 55  LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA 114

Query: 53  -KFFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMCEPLS----VGVHACRRANI 105
             +    P  G  A  +  P AD    KLPD    +E      LS     G H    A +
Sbjct: 115 YGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGV 174

Query: 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 165
            P   V + GAGP+GL+   +A   GA R+ +VD    RL +A+ IGA  I     +  D
Sbjct: 175 QPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPI-----DFSD 229

Query: 166 IAEEVEKIQKAMGTGIDVSFDCAG 189
             + VE+I      G+D + DC G
Sbjct: 230 -GDPVEQILGLEPGGVDRAVDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 54/301 (17%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G E AGV+E VG  V     GDRV                            A     
Sbjct: 60  VPGSEVAGVVEAVGEGVTGFKVGDRV---------------------------VALTG-Q 91

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--HAC-RRANIGPETNVLIMGA-G 117
           G  A +VV PA   F LPD +S EE A   P++ G   HA  RRA + P   VL++GA G
Sbjct: 92  GGFAEEVVVPAAAVFPLPDGLSFEEAA-ALPVTYGTAYHALVRRARLQPGETVLVLGAAG 150

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +GL  +  A+A GA R++     + +L++A+ +GAD+++       D+ E V+ +    
Sbjct: 151 GVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD--PDLRERVKALTG-- 205

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF- 235
           G G+DV +D  G       +L +   GG++ ++G        +P     ++ + VVGV+ 
Sbjct: 206 GRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYW 264

Query: 236 ---------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
                      +       +LL  GKI  +P V+  F   Q    EA    A      KV
Sbjct: 265 GAYARREPELLRANLAELFDLLAEGKI--RPHVSAVFPLEQ--AAEALRALADRKATGKV 320

Query: 287 M 287
           +
Sbjct: 321 V 321

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 96.0 bits (239), Expect = 9e-23
 Identities = 89/312 (28%), Positives = 131/312 (41%), Gaps = 52/312 (16%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++GHE AGV+E VG  V  + PGD V L     C +C  CK GR   C +    AT  + 
Sbjct: 57  LLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFD-THNATQKMT 115

Query: 62  -------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA-----CRRA 103
                        G+ A + +  A  C K+          +   L  GV A         
Sbjct: 116 LTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL---LGCGVMAGLGAAVNTG 172

Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 163
            +    +V ++G G +G   +  A   GA +I+ VD+DD +L  A+E GA + V  S   
Sbjct: 173 GVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT- 231

Query: 164 QDIAEEVEKIQKAM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 222
               + VE I+    G G DV  D  G  +T   A  A    G V LVG+   +MT+   
Sbjct: 232 ----DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTL--- 284

Query: 223 PAAVREVDVVGVFRY----KNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQK 268
                E+ ++ VF      K++W          P+ ++L   G++ +   VT R G    
Sbjct: 285 -----ELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDD- 338

Query: 269 EVEEAFETSARG 280
            VEEAF+    G
Sbjct: 339 -VEEAFDKMHAG 349

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 94.1 bits (234), Expect = 5e-22
 Identities = 88/314 (28%), Positives = 138/314 (43%), Gaps = 44/314 (14%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------- 52
           ++GHE AG++E VG  V+ L  GD V       C  C +CK  + NLC            
Sbjct: 68  ILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVM 127

Query: 53  ------KFFAT----PPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 98
                 +F       P  H     +     V  +    K+  N  L++  M   LS GV 
Sbjct: 128 VNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKK--MSL-LSCGVS 184

Query: 99  -----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
                A   AN+   ++V I G G +GL     ARA GA +I+ VD++  +    KE+G 
Sbjct: 185 TGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244

Query: 154 DNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVG 211
            + +    N +D  + V E+I++  G G+D SF+CAG  + +  A  +T  G G   L+G
Sbjct: 245 TDFI----NPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLG 300

Query: 212 MGHHEMTVPLTPAAV---REV--DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
           +      +PL P  +   R +   V G F+ K+  P   +    G +++   +TH   F 
Sbjct: 301 IHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFE 360

Query: 267 QKEVEEAFETSARG 280
             ++ EAF+    G
Sbjct: 361 --KINEAFQLLEDG 372

Length = 381

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 91.6 bits (228), Expect = 3e-21
 Identities = 79/310 (25%), Positives = 135/310 (43%), Gaps = 46/310 (14%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------M 52
           ++ GHE AGV+ KVG  V  + PGD V L    +C RC  C  G  NLC           
Sbjct: 57  ILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQ 116

Query: 53  KFFATPPVH------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--- 97
               T   H            G+ +   V P     K+ D++ L++  +   +  GV   
Sbjct: 117 ISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACL---VGCGVPTG 173

Query: 98  --HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155
              A   A++ P   V++MG G +G+  +  A   GA +++ VD  +++   A + GA +
Sbjct: 174 WGSAVNIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATH 233

Query: 156 IVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGM 212
                     + E V+ +++   G G D +    G      ++ AL AT  GG+V + G+
Sbjct: 234 AF------ASMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGL 287

Query: 213 GHHE---MTVPLTPAAVREVDVVG-VFRYKNT---WPLCLELLRSGKIDVKPLVTHRFGF 265
           G      + V L    + + ++ G +F   N     P  LEL R+GK+ +  L+T    +
Sbjct: 288 GPMADVDVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRT--Y 345

Query: 266 SQKEVEEAFE 275
           +  ++ E ++
Sbjct: 346 TLDQINEGYQ 355

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 14/237 (5%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++GHE  G++++VG  V +L  GDRV++      C  C++C  GR  LC  +K  A   V
Sbjct: 56  ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK-NAGYTV 114

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGAG 117
            G +A Q +  AD   K+P+   L+          GV    A + + I P   + I GAG
Sbjct: 115 DGGMAEQCIVTADYAVKVPEG--LDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAG 172

Query: 118 PIG-LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
            +G L    A   F A +++ VD++D +L++AKE+GAD  +  S  ++D+A+    IQ+ 
Sbjct: 173 GLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN-SKRVEDVAKI---IQEK 227

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233
            G G   +   A      + A+ A  AGG+V  VG+    M + +    +  ++VVG
Sbjct: 228 TG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVG 283

Length = 338

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 41/306 (13%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF------ 55
           ++GHE AG++E VG  V ++ PGD V       C  C  CK G+ NLC +++        
Sbjct: 59  ILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM 118

Query: 56  ----------ATPPVH----GSLAN-QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-- 98
                       P  H     + +   VV    +  K+     L++  +   L  GV   
Sbjct: 119 PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVA-KINPEAPLDKVCL---LGCGVTTG 174

Query: 99  ---ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155
                  A + P + V + G G +GL  +  A+A GA RI+ +D++  +  +AK+ GA +
Sbjct: 175 YGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATD 234

Query: 156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM-- 212
            V    + + I    + + +    G+D +F+C G  K M  AL A   G G   ++G+  
Sbjct: 235 CVNPKDHDKPI---QQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA 291

Query: 213 -GHHEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 269
            G    T P  L    V +    G ++ ++  P  +E    GKI V   +TH       E
Sbjct: 292 AGQEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DE 349

Query: 270 VEEAFE 275
           + EAF+
Sbjct: 350 INEAFD 355

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 87.4 bits (217), Expect = 1e-19
 Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 37/305 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
           +++GHE AG++E VG  V T+ PGD+V       C +C  C     NLC +         
Sbjct: 62  VILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGL 121

Query: 58  ------------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGV- 97
                        P+H      + +   V       K+     LE+  +  C   S G  
Sbjct: 122 MQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCG-FSTGYG 180

Query: 98  HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
            A   A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +
Sbjct: 181 AAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECI 240

Query: 158 KVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHH 215
               N QD  + + E + +    G+D SF+  G   TM  AL +   G  V  +VG+   
Sbjct: 241 ----NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296

Query: 216 EMTVPLTPAAV---REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 270
              + + P  +   R     V G ++ K++ P  +    + K ++ PL+TH   F +  +
Sbjct: 297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK--I 354

Query: 271 EEAFE 275
            E F+
Sbjct: 355 NEGFD 359

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.5 bits (215), Expect = 1e-19
 Identities = 83/305 (27%), Positives = 115/305 (37%), Gaps = 62/305 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++G + AGV+E VG  V     GD V    G          GG                 
Sbjct: 60  ILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGL--------GGL---------------Q 96

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETNVLIM-GA 116
           GSLA   V  A L    P N+S+ E A   PL VG+ A      RA +     VLI  GA
Sbjct: 97  GSLAEYAVVDARLLALKPANLSMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGA 154

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD-IAEEVEKIQK 175
           G +G V +  A+A GA   V       + + A+ +GAD I+     + + +AE       
Sbjct: 155 GGVGHVAVQLAKAAGA--RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG---- 208

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 234
             G G DV FD  G  +T+  +  A    G  V ++G   H     L P + R     GV
Sbjct: 209 --GRGFDVVFDTVG-GETLDASFEAVALYGRVVSILGGATH----DLAPLSFRNATYSGV 261

Query: 235 F----------RYKNTWPL--CLELLRSGKIDVKPLV-THRFGFSQKEVEEAFETSARGG 281
           F          R  +   L     L+  G++  +PL+    F     E   A      G 
Sbjct: 262 FTLLPLLTGEGRAHHGEILREAARLVERGQL--RPLLDPRTFPLE--EAAAAHARLESGS 317

Query: 282 TAIKV 286
              K+
Sbjct: 318 ARGKI 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 86.4 bits (214), Expect = 3e-19
 Identities = 78/303 (25%), Positives = 125/303 (41%), Gaps = 35/303 (11%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-------- 53
           ++GHE AG++E VG  V ++  GD V       C  C  C  G+ NLC  ++        
Sbjct: 58  ILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM 117

Query: 54  -------FFATPPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHA 99
                       P++      + +   V P     K+     LEE  +  C  ++ G+ A
Sbjct: 118 PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-VTTGIGA 176

Query: 100 C-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
               A +     V + G G IGL  +  AR   A RI+ +D++  +  +AK++GA + V 
Sbjct: 177 VLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVN 236

Query: 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GH 214
            +   + I E + +I      G+D SF+C G    M  AL     G G+  ++G+   G 
Sbjct: 237 PNDYDKPIQEVIVEITDG---GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQ 293

Query: 215 HEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
              T P  L    V      G  + +   P  +E    G+I +   VTH        + E
Sbjct: 294 EISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED--INE 351

Query: 273 AFE 275
           AF+
Sbjct: 352 AFD 354

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 80/301 (26%), Positives = 118/301 (39%), Gaps = 53/301 (17%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V G + AGV+E VG  V  L  GDRV        W  +   G R               
Sbjct: 59  YVPGSDGAGVVEAVGEGVDGLKVGDRV--------WLTNLGWGRR--------------- 95

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-------RRANIGPETNVLI 113
            G+ A  VV PAD    LPD VS E+GA     ++G+ A         RA       VL+
Sbjct: 96  QGTAAEYVVVPADQLVPLPDGVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLV 150

Query: 114 MG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
            G +G +G   +  AR  GA R++          + ++ GAD +       +D+A+ +  
Sbjct: 151 HGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILA 207

Query: 173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 232
                G G+DV  +    N  ++  L     GG++ + G G    T+P+ P   +E  + 
Sbjct: 208 ATA--GQGVDVIIEVLA-NVNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIR 264

Query: 233 GVFRYKNT---WPLCLE----LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 285
           GV  Y  T        E     L  G +  +P++   +     E   A E    GG   K
Sbjct: 265 GVLLYTATPEERAAAAEAIAAGLADGAL--RPVIAREYPLE--EAAAAHEAVESGGAIGK 320

Query: 286 V 286
           V
Sbjct: 321 V 321

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 6/154 (3%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
           GHE  G +E VG  V     GDRV +   G +C  C +C+ GR NLC   +F     V G
Sbjct: 63  GHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDG 121

Query: 63  SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
             A  +V      + +P++   EE A  +C  + +G  A + A + P   + + G G   
Sbjct: 122 GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLAGLKPGQRLGLYGFGASA 180

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154
            + +  AR  GA  +           +A+E+GAD
Sbjct: 181 HLALQIARYQGA-EVFAFTRSGEHQELARELGAD 213

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 83.2 bits (206), Expect = 2e-18
 Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 28/219 (12%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           G E AGV+E+VG  VK +  GDRV +   +    CD C  G   LC           +G 
Sbjct: 59  GAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGG 117

Query: 64  LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV----HACRRANIGPETNVLIMGA-GP 118
            A  +V P    FK+PD++S E  A    L V      HA + A +GP   V++ GA G 
Sbjct: 118 YAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVVVFGASGN 174

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK--- 175
            G+  +  A+  GA  I +      R    KE GAD +V       ++ E+V++I K   
Sbjct: 175 TGIFAVQLAKMMGAEVIAVS-----RKDWLKEFGADEVVDYD----EVEEKVKEITKMAD 225

Query: 176 ----AMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCL 209
               ++G+   D+S    G    + T    T  GG+V L
Sbjct: 226 VVINSLGSSFWDLSLSVLGRGGRLVTFGTLT--GGEVKL 262

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 74/297 (24%), Positives = 106/297 (35%), Gaps = 61/297 (20%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++ GH+ AGV+  VG  V     GD V                           F   P 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEV---------------------------FGMTPF 93

Query: 61  H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----GVHACRRANIGPETNVLI 113
              G+ A  VV PAD     P N+S EE A   PL+       +       +     VLI
Sbjct: 94  TRGGAYAEYVVVPADELALKPANLSFEEAAAL-PLAGLTAWQALF--ELGGLKAGQTVLI 150

Query: 114 MGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
            GA G +G   +  A+A GA   VI           + +GAD ++  +    + A     
Sbjct: 151 HGAAGGVGSFAVQLAKARGA--RVIATASAANADFLRSLGADEVIDYTKGDFERAAAPG- 207

Query: 173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREVDV 231
                  G+D   D  G  +T++ +L     GG+ V + G            A  R V  
Sbjct: 208 -------GVDAVLDTVG-GETLARSLALVKPGGRLVSIAG-----PPPAEQAAKRRGVRA 254

Query: 232 VGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
             VF   +   L    EL+ +GK+  +P+V   F     +  EA E    G    KV
Sbjct: 255 GFVFVEPDGEQLAELAELVEAGKL--RPVVDRVFPLE--DAAEAHERLESGHARGKV 307

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 82.6 bits (204), Expect = 4e-18
 Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE +G + + G+   + + G  V +   I C  C+ CK GR  +C   K      +
Sbjct: 55  LALGHEISGRVIQAGAGAASWI-GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGND-M 112

Query: 61  HGSLANQVVHPAD-LCFKLPDNVSLEEGAM--------CEPLSVGVHACRRANIGPETNV 111
            G  A+ +V PA  LC  + D   L    +         + ++    A  +A +     V
Sbjct: 113 QGGFASHIVVPAKGLC--VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLV 170

Query: 112 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STNLQDIAEEV 170
           +++GAG +G   +  A+A GA  +V +D+D  +L + K  GAD  +     + +++ + +
Sbjct: 171 IVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLI 229

Query: 171 EKIQKAMG---TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR 227
           +   KA G   TG  + F+C+G      +AL     GG + +VG    +    L+     
Sbjct: 230 KAFAKARGLRSTGWKI-FECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAF 288

Query: 228 EVDVVGVFR-YKNTWPLCLELLRSGKIDVKPLVTHR 262
               +G +    + +P  L+L+  GKI + P V  R
Sbjct: 289 HARALGNWGCPPDRYPAALDLVLDGKIQLGPFVERR 324

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 81.3 bits (202), Expect = 8e-18
 Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 37/214 (17%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G E AGV+E VG  V     GDRVA                          +A PP  
Sbjct: 57  VLGVEGAGVVEAVGPGVTGFKVGDRVA--------------------------YAGPP-- 88

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGP 118
           G+ A   V PA    KLPD +S E  A  + + L+          + P   VL+   AG 
Sbjct: 89  GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG 148

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +GL+    A+A GA  I  V  ++ +  +A+  GAD+++    + +D  E V +I    G
Sbjct: 149 VGLLLTQWAKALGATVIGTVSSEE-KAELARAAGADHVI-NYRD-EDFVERVREITG--G 203

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
            G+DV +D  G   T   +L +    G +   G 
Sbjct: 204 RGVDVVYDGVG-KDTFEGSLDSLRPRGTLVSFGN 236

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 81.4 bits (202), Expect = 9e-18
 Identities = 78/290 (26%), Positives = 124/290 (42%), Gaps = 32/290 (11%)

Query: 7   CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLA 65
            AG +  VG  V     GDRV     +  +  +   G       E +  A   P+ G LA
Sbjct: 65  GAGEVVAVGEGVTRFKVGDRV-----VPTFFPNWLDGP---PTAEDEASALGGPIDGVLA 116

Query: 66  NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETNVLIMGAGPIGL 121
             VV P +   + PD++S EE A   P + G+ A         + P   VL+ G G + L
Sbjct: 117 EYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGLGPLKPGDTVLVQGTGGVSL 174

Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
             +  A+A GA R++     D +L  AK +GAD+++   T   D  EEV K+    G G+
Sbjct: 175 FALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTP-DWGEEVLKLTG--GRGV 230

Query: 182 DVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF---RY 237
           D   +  G   T++ ++ A   GG + L+G +   E  V L P   +   + G+    R 
Sbjct: 231 DHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSR- 288

Query: 238 KNTWPLCLELLRS-GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
                    + R+     ++P++   F F  +E +EA+     G    KV
Sbjct: 289 ----AQFEAMNRAIEAHRIRPVIDRVFPF--EEAKEAYRYLESGSHFGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 62/231 (26%), Positives = 92/231 (39%), Gaps = 33/231 (14%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             +G+E AGV+E VG+ V     GDRV++ P       D  + G Y              
Sbjct: 59  ARLGYEAAGVVEAVGAGVTGFAVGDRVSVIP-----AADLGQYGTY-------------- 99

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLIMGA-G 117
               A   + PA    KLPD +S  E A      +  +      A + P  +VLI  A  
Sbjct: 100 ----AEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASS 155

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +GL  +  A A GA  I      + R      +GA ++  + T+ +D+  EV +I    
Sbjct: 156 SVGLAAIQIANAAGATVIATTRTSEKR-DALLALGAAHV--IVTDEEDLVAEVLRI--TG 210

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVR 227
           G G+DV FD  G     +    A   GG + + G +       PL  A  +
Sbjct: 211 GKGVDVVFDPVG-GPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKK 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 80.3 bits (199), Expect = 3e-17
 Identities = 73/316 (23%), Positives = 107/316 (33%), Gaps = 79/316 (25%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++G + AG + +VGS V     GDRVA              GG  N           P +
Sbjct: 57  ILGCDFAGTVVEVGSGVTRFKVGDRVAG----------FVHGGNPN----------DPRN 96

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA------------MCEPLSVGVHACRRANIGPET 109
           G+    VV  ADL  K+PDN+S EE A            + + L + +   + +      
Sbjct: 97  GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK 156

Query: 110 NVLIMGAG-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA--------KEIGADNIV--K 158
            VLI G    +G + +  A+  G    VI          A        K +GAD +    
Sbjct: 157 PVLIWGGSSSVGTLAIQLAKLAGYK--VIT--------TASPKNFDLVKSLGADAVFDYH 206

Query: 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 218
                      VE I+ A G  +  + DC    ++      A    G   LV +    + 
Sbjct: 207 DPD-------VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSL----LP 255

Query: 219 VPLTPAAVREVDVVGVFRYKNT-------------WPLCLELLRSGKIDVKPLVTHRFGF 265
           VP      + V V  V  Y                W    ELL  GK+   P+     G 
Sbjct: 256 VPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGL 315

Query: 266 SQKEVEEAFETSARGG 281
               V+E  +   +G 
Sbjct: 316 EG--VQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 76.9 bits (189), Expect = 5e-16
 Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 61/316 (19%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------- 52
           + GHE +G++E +G  V     GD V       C  C HC  G+ N+C  +         
Sbjct: 66  IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMH 125

Query: 53  -------KFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA-- 99
                       P  H     S +   V  +    K+     L +  +   LS GV A  
Sbjct: 126 SDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICL---LSCGVAAGL 182

Query: 100 ---CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156
                 A++   ++V+I G G +GL     A+  GA +I+ VD++  +   AK  G  + 
Sbjct: 183 GAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDF 242

Query: 157 VKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 215
           +    N  D++E ++++ K M G G D SF+C G     +TAL +   G           
Sbjct: 243 I----NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWG--------- 289

Query: 216 EMTVPL-TPAAVREVD---------------VVGVFRYKNTWPLCLELLRSGKIDVKPLV 259
            +TV L  P A  EV                + G ++ K+  P  ++   + +I +   +
Sbjct: 290 -LTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFI 348

Query: 260 THRFGFSQKEVEEAFE 275
           TH   F   E+ +AFE
Sbjct: 349 THNLSFD--EINKAFE 362

Length = 378

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 75.9 bits (188), Expect = 7e-16
 Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 45/218 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++G E AGV+  VG  V     GDRV AL  G          GG Y              
Sbjct: 60  ILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG----------GG-Y-------------- 94

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHA-CRRANIGPETNVLIM-GAG 117
               A  VV PA     +P+ +SL E A + E          +   +     VLI  GA 
Sbjct: 95  ----AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGAS 150

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G   +  A+A GA  I     ++ +L   + +GAD  V ++   +D AEEV++     
Sbjct: 151 GVGTAAIQLAKALGARVIATAGSEE-KLEACRALGAD--VAINYRTEDFAEEVKEATG-- 205

Query: 178 GTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGM 212
           G G+DV  D  G   L + +  AL      G++ L+G+
Sbjct: 206 GRGVDVILDMVGGDYLARNLR-ALA---PDGRLVLIGL 239

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 76.1 bits (188), Expect = 7e-16
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 22/237 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATP 58
           +V+GHE  GV+E+VG     L PGD V         +C +C+ GR + C   ++      
Sbjct: 59  LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIK 117

Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA-------CRRANIGPETNV 111
            +HG +    V   +   K+P +++ + G + EPLSV   A        +R         
Sbjct: 118 GLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRA 176

Query: 112 LIMGAGPIGLVTMLAARAFGAPRIVI--VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 169
           L++GAGPIGL+  L  R  G    V+   D  D +  + +E+GA  +     N       
Sbjct: 177 LVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV-----NSSKTPVA 231

Query: 170 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 226
             K+        D+  +  G+      AL A    G V L G+        +    +
Sbjct: 232 EVKLVGEF----DLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGEL 284

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 67/304 (22%), Positives = 112/304 (36%), Gaps = 57/304 (18%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G+E  GV+ +VGS V  L+ G RV    G   W+                        
Sbjct: 59  VPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQ------------------------ 94

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSVGVHACRRANIGPETNVLIMGAGPI 119
                 VV PAD    +PD++S E+ AM    PL+  +         P  + +I  A   
Sbjct: 95  ----EYVVAPADDLIPVPDSISDEQAAMLYINPLTAWL-MLTEYLKLPPGDWVIQNAANS 149

Query: 120 GLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +  ML   A+  G   I +V  D+    + K +GAD ++  S    D+A+ V++     
Sbjct: 150 AVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPE--DLAQRVKEATG-- 204

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV--GMGHHEMTVPLTPAAVREVDVVGVF 235
           G G  ++ D  G     +T L  +   G   +    +    +  P +    +++ V G +
Sbjct: 205 GAGARLALDAVG--GESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFW 262

Query: 236 -------RYKNTWPLCLE----LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 284
                    K            L+ +G +     V  +F     + EEA   + + G   
Sbjct: 263 LRQWLHSATKEAKQETFAEVIKLVEAGVL--TTPVGAKFPLE--DFEEAVAAAEQPGRGG 318

Query: 285 KVMF 288
           KV+ 
Sbjct: 319 KVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 74.1 bits (182), Expect = 2e-15
 Identities = 67/253 (26%), Positives = 100/253 (39%), Gaps = 24/253 (9%)

Query: 2   VIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-- 53
           V+GHE  G +  +            L  G RV     + C RC  C+ G    C  ++  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 54  ----FFATPPVHGSLANQVVHPADL-CFKLPDNV--SLEEGAMCEPLSVGVHACRRANIG 106
                 +  P+ G  A     PA      +PD++  ++   A C   +V + A   A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAGDL 119

Query: 107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 166
               VL++GAG +GL    AA A GA R+V  D    R  +A   GA  + +       +
Sbjct: 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV----L 175

Query: 167 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 226
           AE    +Q   G G+DV+ + +G    +   L +   GG   L G       V L P  V
Sbjct: 176 AERQGGLQN--GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233

Query: 227 --REVDVVGVFRY 237
             R + + GV  Y
Sbjct: 234 VRRWLTIRGVHNY 246

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 75.3 bits (185), Expect = 2e-15
 Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFA 56
           +V+GHE  G + + G +V+ +  GD V++   I+C RC +CK G   +C    P     A
Sbjct: 63  LVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAA 122

Query: 57  TPPVH-----GSLANQVVHP-ADL-CFKLPD-NVSLEE----GAMCEPLSVGVHACRRAN 104
              V      G  +  V+ P AD    K PD + +LE+      + +    G H    A 
Sbjct: 123 YGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAG 182

Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 164
           +GP + V I GAGP+GL    +A+  GA  +++ D++  RL+ A+  G + +     +L 
Sbjct: 183 VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV-----DLS 237

Query: 165 DIAEEVEKIQKAMGT-GIDVSFDCAG 189
             A   E+I++ +G   +D + DC G
Sbjct: 238 KDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 74.1 bits (182), Expect = 5e-15
 Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 22/234 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI---SCWRCDHCKGGRYNLCPEMKFFAT 57
           +V GHE  G++ K+G  VK    GDRV +  G+   SC  C+ C     N CP+M F   
Sbjct: 68  IVPGHEIVGIVTKLGKNVKKFKEGDRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYN 125

Query: 58  PPVH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPET 109
              H      G  ++ +V       + PDN+ L+ GA  +C  ++V           P  
Sbjct: 126 SIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGK 185

Query: 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 169
           ++ + G G +G V +   +AFG    VI    +        +GAD+ + VST+       
Sbjct: 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTD------- 237

Query: 170 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 223
            EK++ A+GT +D   D       +   LG     GK+  +G+    + +P+ P
Sbjct: 238 PEKMKAAIGT-MDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 71/301 (23%), Positives = 109/301 (36%), Gaps = 60/301 (19%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           + G + AG +  VGS V     GD V                  +   P           
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEV------------------FGRLPPKGG------- 95

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPETNVLIMGA- 116
           G+LA  VV P     K P+ VS EE A   P++ G+ A         + P   VLI GA 
Sbjct: 96  GALAEYVVAPESGLAKKPEGVSFEEAA-ALPVA-GLTALQALRDAGKVKPGQRVLINGAS 153

Query: 117 GPIGLVTMLAARAFGAPRIVIVD----VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
           G +G   +  A+A GA  +  V      +     + + +GAD ++  +T  +D       
Sbjct: 154 GGVGTFAVQIAKALGA-HVTGVCSTRNAE-----LVRSLGADEVIDYTT--EDFVALTAG 205

Query: 173 IQKAMGTGIDVSFDCAGLNK-TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV----- 226
            +K      DV FD  G +  ++  A  A   GG+   VG G   + + L    +     
Sbjct: 206 GEK-----YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGG 260

Query: 227 -REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 285
            R +                EL+  GK+  KP++   +     +  EA+     G    K
Sbjct: 261 GRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPLE--DAPEAYRRLKSGRARGK 316

Query: 286 V 286
           V
Sbjct: 317 V 317

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 67/305 (21%), Positives = 110/305 (36%), Gaps = 65/305 (21%)

Query: 3   IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
           +G EC+G++ +VGS V  L  GDRV    G++                           G
Sbjct: 31  LGLECSGIVTRVGSGVTGLKVGDRVM---GLA--------------------------PG 61

Query: 63  SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-------RRANIGPETNVLIM- 114
           + A  V   A L  K+PD++S EE A     ++ V            A +    +VLI  
Sbjct: 62  AFATHVRVDARLVVKIPDSLSFEEAA-----TLPVAYLTAYYALVDLARLQKGESVLIHA 116

Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
            AG +G   +  A+  GA     V  ++ R  + +  G  + +  S +L   A+ + +  
Sbjct: 117 AAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDL-SFADGILRAT 175

Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--------EMTVPLTPAAV 226
              G G+DV  +     + +  +       G+   V +G           M   L   + 
Sbjct: 176 G--GRGVDVVLNSLS-GELLRASWRCLAPFGR--FVEIGKRDILSNSKLGMRPFLRNVSF 230

Query: 227 REVDVVGVF-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 281
             VD+  +        +      LELL +G +  KPL       +     +AF     G 
Sbjct: 231 SSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPSA--SEIDAFRLMQSGK 286

Query: 282 TAIKV 286
              KV
Sbjct: 287 HIGKV 291

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 66.9 bits (164), Expect = 9e-13
 Identities = 73/310 (23%), Positives = 117/310 (37%), Gaps = 71/310 (22%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++G E AG +  VG  V     GDRV          C    GG Y               
Sbjct: 60  ILGLEVAGEVVAVGEGVSRWKVGDRV----------CALVAGGGY--------------- 94

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEP---LSVGVHACRRANIGPETNVLIM-GAG 117
              A  V  PA     +P+ +SL E A   P    +V  +  +R  +     VLI  GA 
Sbjct: 95  ---AEYVAVPAGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGAS 150

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            IG   +  A+AFGA        D+ + +  + +GAD  + ++   +D  E V+   +  
Sbjct: 151 GIGTTAIQLAKAFGARVFTTAGSDE-KCAACEALGAD--IAINYREEDFVEVVK--AETG 205

Query: 178 GTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVG 233
           G G+DV  D  G   LN+ +     A    G++  +G  G  +  + L P   + + + G
Sbjct: 206 GKGVDVILDIVGGSYLNRNIK----ALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITG 261

Query: 234 V----------------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 277
                             R ++ WP    LL SG++  +P++   F        +A    
Sbjct: 262 STLRARPVAEKAAIAAELR-EHVWP----LLASGRV--RPVIDKVFPLED--AAQAHALM 312

Query: 278 ARGGTAIKVM 287
             G    K++
Sbjct: 313 ESGDHIGKIV 322

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 17/215 (7%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           V GHE  G I+ VG  V     GDRV +   G  C  CD C+ G +  C   K      V
Sbjct: 57  VPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGV 113

Query: 61  H--GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
              G  A  ++ PA+   ++PD++   E A  +C  ++   +A R +   P   V + G 
Sbjct: 114 TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGI 172

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G + +  A   G  R V +     +  +A+++GA     + T+ +D+AE +    + 
Sbjct: 173 GGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAH--HYIDTSKEDVAEAL----QE 225

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 211
           +G G  +    A   K +S  +G     GK+ ++G
Sbjct: 226 LG-GAKLILATAPNAKAISALVGGLAPRGKLLILG 259

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 79/329 (24%), Positives = 112/329 (34%), Gaps = 99/329 (30%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
            +G +C+GV+  +GS VK+   GD V                            A PP  
Sbjct: 76  TLGRDCSGVVVDIGSGVKSFEIGDEVWG--------------------------AVPPWS 109

Query: 62  -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-------RRANIGPET---- 109
            G+ A  VV P +   K P N+S EE A     S+                + P+     
Sbjct: 110 QGTHAEYVVVPENEVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGK 164

Query: 110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 168
            VLI+G  G +G   +   +A+GA   V        + + K +GAD+++       D   
Sbjct: 165 RVLILGGSGGVGTFAIQLLKAWGA--HVTTTCSTDAIPLVKSLGADDVI-------DYNN 215

Query: 169 EVEKIQKAMGTGIDVSFDCAGLNK----------------TMSTALGATCAGGKVCLVGM 212
           E  + +       DV  D  G +                  +S  L  T   G V   GM
Sbjct: 216 EDFEEELTERGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLV--GGM 273

Query: 213 GHHEMTVPLTPAAVREVDVVGVFRYKNT--W------PLCL----ELLRSGKIDVKPLVT 260
                   L  A       V      +   W         L    +L+  GKI  KP++ 
Sbjct: 274 --------LKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVID 323

Query: 261 HRFGFSQKEVEEAFE----TSARGGTAIK 285
             F F   EV EA+E      ARG T IK
Sbjct: 324 KVFPFE--EVPEAYEKVESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 64.7 bits (159), Expect = 5e-12
 Identities = 43/139 (30%), Positives = 56/139 (40%), Gaps = 42/139 (30%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G ECAGV+ +VG  V  L  GDRV    G+                            
Sbjct: 25  VLGGECAGVVTRVGPGVTGLAVGDRVM---GL--------------------------AP 55

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV------HA-CRRANIGPETNVLI- 113
           G+ A +VV  A L   +PD  S EE A     +V V      +A    A + P  +VLI 
Sbjct: 56  GAFATRVVTDARLVVPIPDGWSFEEAA-----TVPVVFLTAYYALVDLARLRPGESVLIH 110

Query: 114 MGAGPIGLVTMLAARAFGA 132
             AG +G   +  AR  GA
Sbjct: 111 AAAGGVGQAAIQLARHLGA 129

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 56/194 (28%), Positives = 74/194 (38%), Gaps = 43/194 (22%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G ECAG +E VG  VK    GDRV     +   R                        
Sbjct: 59  VPGFECAGTVEAVGEGVKDFKVGDRV-----MGLTRF----------------------- 90

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETNVLI-MGA 116
           G  A  V  PAD  F LPD +S EE A        + A        N+ P  +VL+   A
Sbjct: 91  GGYAEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNLRPGQSVLVHSAA 148

Query: 117 GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
           G +GL      +    P + +V      +    KE G  +++   T  QD  EEV+KI  
Sbjct: 149 GGVGLAAGQLCKT--VPNVTVVGTASASKHEALKENGVTHVIDYRT--QDYVEEVKKIS- 203

Query: 176 AMGTGIDVSFDCAG 189
               G+D+  D  G
Sbjct: 204 --PEGVDIVLDALG 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 36/172 (20%)

Query: 2   VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++GHE AG I KVG + +    PG R  ++P +       C G  Y              
Sbjct: 65  ILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYP----------- 113

Query: 61  HGSLANQVVHPADL----CFKLPDNVSLEEGAMCEPLS--VG-VHACRRANIG------- 106
            G LA   + P ++    C  + +     E ++ EPLS  +G   A      G       
Sbjct: 114 -GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMG 172

Query: 107 --PETNVLIMG-AGPIGLVTMLAARAFGAP----RIVIVDVDDYRLSVAKEI 151
             P  N  I+G AGP+GL  M    A   P     +V+ DV+D RL+ A+ +
Sbjct: 173 IKPGGNTAILGGAGPMGL--MAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 10/163 (6%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           + G + +G++  VG  VK    GD V +   +         GG     P  + +     +
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNY 143

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNVLIMG 115
           GS A   +  A      P ++S EE A    L VG  A R         + P  NVLI G
Sbjct: 144 GSFAQFALVQATQLMPKPKHLSWEEAA-AYML-VGATAYRMLFGWNPNTVKPGDNVLIWG 201

Query: 116 A-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
           A G +G + +  ARA GA  + +V   + +    + +GA+ ++
Sbjct: 202 ASGGLGSMAIQLARAAGANPVAVVS-SEEKAEYCRALGAEGVI 243

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 5e-09
 Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 39/193 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++G E AG +E VGS+VK    GDRV AL PG                            
Sbjct: 61  ILGLEVAGYVEDVGSDVKRFKEGDRVMALLPG---------------------------- 92

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHACRR-ANIGPETNVLI-MGAG 117
            G  A   V        +P   + EE  A+ E         ++  ++    +VLI  GA 
Sbjct: 93  -GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS 151

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G      A  +GA  I+    ++ ++   K++ A  ++       D      K++K  
Sbjct: 152 GVGTAAAQLAEKYGAATIITTSSEE-KVDFCKKLAAIILI----RYPDEEGFAPKVKKLT 206

Query: 178 G-TGIDVSFDCAG 189
           G  G+++  DC G
Sbjct: 207 GEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 21/234 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPP 59
           ++ GHE  G+  KVG  V     GDRV +   I SC  C+ C     N CP++ F     
Sbjct: 62  IIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSR 121

Query: 60  VHGSLANQ------VVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPET-- 109
                 NQ      +V        +PD +  + GA  +C  ++V     +   +  E+  
Sbjct: 122 SSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV-YSPMKYYGMTKESGK 180

Query: 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 169
            + + G G +G + +   +AFG    VI    +        +GAD+ + V+T+ Q     
Sbjct: 181 RLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFL-VTTDSQ----- 234

Query: 170 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 223
             K+++A+GT +D   D       +          GK+  +G+    + +P+ P
Sbjct: 235 --KMKEAVGT-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFP 285

Length = 375

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 18/167 (10%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFFAT 57
           +IG + +GV+ +VG  V     GD V      SC + D      + G   L  E + +  
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEVV----ASCLQVDLTAPDGRDGDPMLSSEQRIWGY 135

Query: 58  PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNV 111
               GS A   +         P +++ EE A C  L  G  A R+      A + P  NV
Sbjct: 136 ETNFGSFAEFALVKDYQLMPKPKHLTWEEAA-CPGL-TGATAYRQLVGWNPAAVKPGDNV 193

Query: 112 LIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
           LI GA G +G      ARA G   + +V   + +    + +GA+ ++
Sbjct: 194 LIWGAAGGLGSYATQLARAGGGNPVAVVSSPE-KAEYCRSLGAEAVI 239

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 71/286 (24%), Positives = 103/286 (36%), Gaps = 48/286 (16%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G + AGV+  VG++V     GDRVA           H    R                
Sbjct: 59  VPGVDGAGVVVAVGAKVTGWKVGDRVAY----------HASLAR---------------G 93

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGA-GP 118
           GS A   V  A     LPD++S EE A   C  L+      ++  I     +LI G  G 
Sbjct: 94  GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGG 153

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G   +  A+  G    VI           K +GAD    +  N +D+ E +++I    G
Sbjct: 154 VGSFAVQLAKRAGL--RVITTCSKRNFEYVKSLGAD--HVIDYNDEDVCERIKEITG--G 207

Query: 179 TGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA-VREVDVVGVF 235
            G+D   D  G      ++  L     G  VC+ G        P T A  V EV +    
Sbjct: 208 RGVDAVLDTVGGETAAALAPTLAFN--GHLVCIQGRPDASPDPPFTRALSVHEVALGAAH 265

Query: 236 RY--KNTWP-------LCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
            +     W          LELL +GK++   +    F    + +  
Sbjct: 266 DHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRA 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 49/184 (26%), Positives = 70/184 (38%), Gaps = 37/184 (20%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           G E +GV+  VG  V  L  GD V    G                   M         G 
Sbjct: 42  GFEASGVVRAVGPHVTRLAVGDEVIAGTG-----------------ESM---------GG 75

Query: 64  LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG---VHACRRANIGPETNVLIMGA-GPI 119
            A  V  P D   + P ++S EE   C    V    + A  RA +    ++LI  A G  
Sbjct: 76  HATLVTVPEDQVVRKPASLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGT 133

Query: 120 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 179
           GL+ +  AR  GA        DD +L   K++G  +++       D  EE+ ++    G 
Sbjct: 134 GLMAVQLARLKGAEIYATASSDD-KLEYLKQLGVPHVINYVEE--DFEEEIMRLTG--GR 188

Query: 180 GIDV 183
           G+DV
Sbjct: 189 GVDV 192

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 31/196 (15%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           M + HE  GV+  V     T   G +V + P       +  +    N  P  +F ++   
Sbjct: 60  MALIHEGIGVV--VSDPTGTYKVGTKVVMVPNTPV---EKDEIIPENYLPSSRFRSSG-Y 113

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN---IGPETNVLIMGAG 117
            G + + V  P D   KLPDNV  E  A  E +SVGVHA  R           + + G G
Sbjct: 114 DGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDG 173

Query: 118 PIGLVTMLAAR-AFGAPRIVIVDVDDYRL---SVAKEIGADNIVKVSTNLQDIAEEVEKI 173
            +G +T L  +  +   ++V+      +L   S A E         +  + DI E++   
Sbjct: 174 NLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADE---------TYLIDDIPEDLA-- 222

Query: 174 QKAMGTGIDVSFDCAG 189
                  +D +F+C G
Sbjct: 223 -------VDHAFECVG 231

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 35/190 (18%)

Query: 3   IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
           +G E AGV+ KVGS VK +  GDRV                  Y         A   VH 
Sbjct: 61  LGTEAAGVVSKVGSGVKHIKVGDRVV-----------------YAQSA---LGAYSSVHN 100

Query: 63  SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN--IGP-ETNVLIMGAGPI 119
             A++          LPD +S E+ A      + V+   R    I P E  +    AG +
Sbjct: 101 VPADKAA-------ILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV 153

Query: 120 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 179
           GL+    A+A GA  I  V     +   AK+ GA  ++      ++I E V++I    G 
Sbjct: 154 GLIACQWAKALGAKLIGTVGSAQ-KAQRAKKAGAWQVINYRE--ENIVERVKEITG--GK 208

Query: 180 GIDVSFDCAG 189
            + V +D  G
Sbjct: 209 KVRVVYDSVG 218

Length = 327

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 49.3 bits (118), Expect = 7e-07
 Identities = 60/240 (25%), Positives = 84/240 (35%), Gaps = 39/240 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V G E AGV++ VG  V     G RV                             T   
Sbjct: 61  YVPGGEVAGVVDAVGPGVDPAWLGRRVVAH--------------------------TGRA 94

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC---RRANIGPETNVLIMGA- 116
            G  A   V   D    +PD + LE       +  G  A      A + P   VL+  A 
Sbjct: 95  GGGYAELAVADVDSLHPVPDGLDLEAAVAV--VHDGRTALGLLDLATLTPGDVVLVTAAA 152

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G + +  A+A GA  +V       + ++ + +GAD  V V     D  ++V   +  
Sbjct: 153 GGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGAD--VAVDYTRPDWPDQVR--EAL 207

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVF 235
            G G+ V  D  G       AL     GG+    G    E T +    A  R V VVG+ 
Sbjct: 208 GGGGVTVVLDGVG-GAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLL 266

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 18/220 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT-- 57
           MV GHE  G + +VGS+V     GD V +   +  C  C  CK      C +  +     
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDV 124

Query: 58  ----PPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNV 111
                P  G  A+ +V       K+P+ ++ E+ A  +C  ++V                
Sbjct: 125 YTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRG 184

Query: 112 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 171
            I+G G +G + +  A+A G    VI   D  R    + +GAD+ +        ++ +  
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAA 236

Query: 172 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 211
           ++Q+A    +D   D   +   +   L      GK+ L+G
Sbjct: 237 EMQEA-ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMG 275

Length = 357

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 67/237 (28%), Positives = 86/237 (36%), Gaps = 43/237 (18%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           G E  GV++ VG  VK L  G RVA                              PVHG+
Sbjct: 63  GSEAVGVVDAVGEGVKGLQVGQRVA-------------------------VA---PVHGT 94

Query: 64  LANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGP-ETNVLIMGAGPIG 120
            A   V PAD    LPD +S E  A     PLS  +       + P +  +     G +G
Sbjct: 95  WAEYFVAPADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAVG 153

Query: 121 -LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STNLQDIAEEVEKIQKAMG 178
            LV MLAA A G   I +V  D        E+ A  I  V ST      ++V +   A G
Sbjct: 154 KLVAMLAA-ARGINVINLVRRDA----GVAELRALGIGPVVSTEQPGWQDKVREA--AGG 206

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 234
             I V+ D  G  K     L     GG +   G M    M +       ++  V G 
Sbjct: 207 APISVALDSVG-GKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGF 262

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 46.8 bits (111), Expect = 5e-06
 Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 13/136 (9%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATP 58
           GHE  G +   G++      GDRV    GI     +C  C +C+ G  NLCP  ++    
Sbjct: 61  GHEVVGEVAGRGADAGGFAVGDRV----GIAWLRRTCGVCRYCRRGAENLCPASRYTGW- 115

Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
              G  A     PA   ++LP      E A  +C  + +G  A  RA++ P   + + G 
Sbjct: 116 DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGF 174

Query: 117 GPIGLVTMLAARAFGA 132
           G    +T   A A GA
Sbjct: 175 GGSAHLTAQVALAQGA 190

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 44.3 bits (105), Expect = 7e-06
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210
           +GAD ++  +T  +D  E         G G+DV  D  G    +   L     G  V + 
Sbjct: 1   LGADEVIDYTT--EDFEEATA------GEGVDVVLDTVGGETLLRALLALKPGGRLVSIG 52

Query: 211 GMGHHEMTVPL-TPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQ 267
           G               VR V +  V   +    L    EL+ +GK+  +P++   F    
Sbjct: 53  GPDLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKL--RPVIDRVFPLE- 109

Query: 268 KEVEEAFETSARGGTAIKV 286
            E  EA      G    KV
Sbjct: 110 -EAAEAHRYLESGRARGKV 127

Length = 129

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 75/310 (24%), Positives = 116/310 (37%), Gaps = 59/310 (19%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G+E  G + KVGS VK+L PGD V                               P  
Sbjct: 66  VGGNEGVGEVVKVGSGVKSLKPGDWV---------------------------IPLRPGL 98

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-----ANIGPETNVLIMGA 116
           G+     V PAD   K+P++V  E+ A    LSV      R       + P   V+  GA
Sbjct: 99  GTWRTHAVVPADDLIKVPNDVDPEQAAT---LSVNPCTAYRLLEDFVKLQPGDWVIQNGA 155

Query: 117 -GPIGLVTMLAARAFGAPRI-VIVDVDDYRLSVA--KEIGADNIVKVSTNLQDIAEEVEK 172
              +G   +  A+  G   I V+ D  D        K +GAD+++        +A E+ K
Sbjct: 156 NSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLK 215

Query: 173 IQKAMGTGIDVSFDCAGLNKT--MSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREV 229
              A G    ++ +C G      ++  L     GG  V   GM    +TVP +    +++
Sbjct: 216 --SAPGGRPKLALNCVGGKSATELARLLS---PGGTMVTYGGMSGQPVTVPTSLLIFKDI 270

Query: 230 DVVGVFRYKNT-------WPLCL----ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 278
            + G +  +             L    EL+R GK+   P V        +E ++A   + 
Sbjct: 271 TLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL-KAPPVEKVTDDPLEEFKDALANAL 329

Query: 279 RGGTAIKVMF 288
           +GG   K + 
Sbjct: 330 KGGGGGKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 20/210 (9%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           G +  G +  VG  V T   G+RV ++P I             +   ++ +  +    G 
Sbjct: 82  GADIVGRVVAVGEGVDTARIGERVLVDPSIR-------DPPEDDPA-DIDYIGS-ERDGG 132

Query: 64  LANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHACRRANIGPETNVLIMGA-GPIGL 121
            A   V PA+  + +   +S  E        S   +   RA +G    VL+ GA G +G 
Sbjct: 133 FAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGS 192

Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
             +  A+  GA  IVI      +    + +GAD ++     L      +   +   G  +
Sbjct: 193 ALVQLAKRRGA--IVIAVAGAAKEEAVRALGADTVILRDAPL------LADAKALGGEPV 244

Query: 182 DVSFDCAGLNKTMSTALGATCAGGKVCLVG 211
           DV  D  G        L     GG+    G
Sbjct: 245 DVVADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 60/287 (20%), Positives = 102/287 (35%), Gaps = 60/287 (20%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V G+E  G + + G +     PGDRV + PG +C                  +     +
Sbjct: 60  LVPGYESVGRVVEAGPDTGFR-PGDRVFV-PGSNC------------------YEDVRGL 99

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNV---LIMGAG 117
            G  + ++V PA    +L   +    G     L++   A R A  G E  V   LI+G G
Sbjct: 100 FGGASKRLVTPASRVCRLDPAL----GPQGALLALAATA-RHAVAGAEVKVLPDLIVGHG 154

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI--QK 175
            +G +     +A G     + + +  R                    D A   E +  +K
Sbjct: 155 TLGRLLARLTKAAGGSPPAVWETNPRRR-------------------DGATGYEVLDPEK 195

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 235
                    +D +G    + T +     GG++ L G     +     PA ++E       
Sbjct: 196 DPRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEAR----L 251

Query: 236 RYKNTWP-----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 277
           R    W         EL+ SG + +  L+TH+      +  EA+ T+
Sbjct: 252 RIAAEWQPGDLHAVRELIESGALSLDGLITHQ--RPASDAAEAYMTA 296

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 48/204 (23%)

Query: 3   IGHECAGVIEKVGSEVKTLVP-GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           +G + +GVI KVGS V +    GD V    GI      H  GG+                
Sbjct: 62  LGRDYSGVIVKVGSNVASEWKVGDEVC---GIY----PHPYGGQ---------------- 98

Query: 62  GSLANQ-VVHPADLCFKL---PDNVSLEEGAMCEPLSVG-----VHACRRANIGPETNVL 112
           G+L+   +V P      +   P+N+SLEE A   PL +G     +    +  +GP++ VL
Sbjct: 99  GTLSQYLLVDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVL 156

Query: 113 IMGAG-PIGL-VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV-----KVSTNLQD 165
           ++G    +G     LA   +    +V          + K++GAD+ +          L+ 
Sbjct: 157 VLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKP 215

Query: 166 IAEEVEKIQKAMGTGIDVSFDCAG 189
           + E V+   K      D+  DC G
Sbjct: 216 VLENVKGQGK-----FDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 36/214 (16%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G E  G +E+      T  PG RVA   G                   M         
Sbjct: 59  VLGIEAVGEVEEAPGG--TFTPGQRVATAMG------------------GMGR----TFD 94

Query: 62  GSLANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHACRRA-NIGPETNVLIMGA-GP 118
           GS A   + P +  + +  ++S  E  A+ E       +  R+  + P   +LI G    
Sbjct: 95  GSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS 154

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +GL  +  A+A G   +        R ++ KE+GAD +V    +   IAE++        
Sbjct: 155 VGLAALKLAKALG-ATVTATTRSPERAALLKELGADEVV---IDDGAIAEQLRAA----P 206

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
            G D   +  G   T+  +L     GG VC+ G+
Sbjct: 207 GGFDKVLELVG-TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 45/197 (22%)

Query: 1   MVIGHECAGVIEKVGSEV--KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 58
           +  G E +G +   G     ++L+ G RVA               G Y            
Sbjct: 62  VPPGFEGSGTVVAAGGGPLAQSLI-GKRVA------------FLAGSY------------ 96

Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSV--GVHACRRANIGPETNVLIM 114
              G+ A   V  A  C  LPD VS E+GA     PL+    +   R          ++ 
Sbjct: 97  ---GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETAREEGAK----AVVH 149

Query: 115 GAGPIGLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
            A    L  ML    +A G   I IV   +  + + K+IGA+ +  ++++  D  E++++
Sbjct: 150 TAAASALGRMLVRLCKADGIKVINIVRRKEQ-VDLLKKIGAEYV--LNSSDPDFLEDLKE 206

Query: 173 IQKAMGTGIDVSFDCAG 189
           +         + FD  G
Sbjct: 207 LIAK--LNATIFFDAVG 221

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 71/312 (22%), Positives = 101/312 (32%), Gaps = 74/312 (23%)

Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           G++  G ++ +GS V     GDRVA                           A   V G 
Sbjct: 62  GYDLVGRVDALGSGVTGFEVGDRVA---------------------------ALTRV-GG 93

Query: 64  LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPETNVLIMGA-GP 118
            A  +   A     +P+ V   E A+C  L   V A     R A +     VLI GA G 
Sbjct: 94  NAEYINLDAKYLVPVPEGVDAAE-AVCLVL-NYVTAYQMLHRAAKVLTGQRVLIHGASGG 151

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G   +  A   GA   V     +   +  +E+GA       T +    ++        G
Sbjct: 152 VGQALLELALLAGAE--VYGTASERNHAALRELGA-------TPIDYRTKDWLPAMLTPG 202

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-----GHHEMTVPLTPAAV------- 226
            G+DV FD  G  ++   +  A   GG +   G              L            
Sbjct: 203 -GVDVVFDGVGG-ESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKL 260

Query: 227 ----REVDVVGVFRYKNTWP--------LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
               R      V+R +   P          L+LL  GKI  +P +  R   S  EV EA 
Sbjct: 261 LPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPLS--EVAEAH 316

Query: 275 ETSARGGTAIKV 286
                G    K+
Sbjct: 317 RLLESGKVVGKI 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|225136 COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 89  MCEPLSVGVH------ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 142
           M + +S G+H            I P   VL +  G  G + +L A++ G   +V +D+ +
Sbjct: 27  MNDLMSFGLHRLWRRALISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISE 85

Query: 143 YRLSVAKE 150
             L VA+E
Sbjct: 86  SMLEVARE 93

Length = 238

>gnl|CDD|102354 PRK06392, PRK06392, homoserine dehydrogenase; Provisional

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 110 NVLIMGAGPIGLVTMLAARAFGAPR-----IVIVDVDDYRLSVAKEIGAD--NIV--KVS 160
            + I+G G +GL  +   ++    R     I +V V D +LS   E G D   I+  K  
Sbjct: 2   RISIIGLGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSKLSYYNERGLDIGKIISYKEK 61

Query: 161 TNLQDIAEEVEKIQKAMGTGIDVSFDC 187
             L++I  E  K  +      DV  D 
Sbjct: 62  GRLEEIDYEKIKFDEIFEIKPDVIVDV 88

Length = 326

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.98
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.97
PTZ00354	334	alcohol dehydrogenase; Provisional	99.97
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.97
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.97
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.96
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.96
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.96
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.96
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.96
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.96
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.96
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.96
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.96
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.95
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.95
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.95
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.95
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.93
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.77
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.7
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.5
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.48
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.4
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.7
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.57
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.41
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.38
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.37
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.32
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.28
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.18
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.12
PLN02494	477	adenosylhomocysteinase	98.06
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.91
PRK08324	681	short chain dehydrogenase; Validated	97.87
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.85
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.8
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.73
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.73
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.69
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.69
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.68
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.67
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.66
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.61
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.6
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.58
PRK05993	277	short chain dehydrogenase; Provisional	97.58
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.44
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.38
PRK12742	237	oxidoreductase; Provisional	97.32
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.28
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.26
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.26
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.25
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.23
PRK14967	223	putative methyltransferase; Provisional	97.22
PRK08017	256	oxidoreductase; Provisional	97.22
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.2
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.2
PRK05693	274	short chain dehydrogenase; Provisional	97.2
PRK06182	273	short chain dehydrogenase; Validated	97.19
PRK06057	255	short chain dehydrogenase; Provisional	97.16
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.15
PRK06139	330	short chain dehydrogenase; Provisional	97.14
PRK06949	258	short chain dehydrogenase; Provisional	97.09
PRK07109	334	short chain dehydrogenase; Provisional	97.09
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.07
PRK08265	261	short chain dehydrogenase; Provisional	97.05
PRK12939	250	short chain dehydrogenase; Provisional	97.03
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.02
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.02
PRK07814	263	short chain dehydrogenase; Provisional	97.01
PRK07060	245	short chain dehydrogenase; Provisional	96.99
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.98
PRK07806	248	short chain dehydrogenase; Provisional	96.97
PRK07825	273	short chain dehydrogenase; Provisional	96.97
TIGR00438	188	rrmJ cell division protein FtsJ.	96.93
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.93
PRK08177	225	short chain dehydrogenase; Provisional	96.9
PRK05866	293	short chain dehydrogenase; Provisional	96.9
PRK05872	296	short chain dehydrogenase; Provisional	96.88
PRK06841	255	short chain dehydrogenase; Provisional	96.88
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.86
PRK06484	520	short chain dehydrogenase; Validated	96.85
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.84
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.84
PRK07677	252	short chain dehydrogenase; Provisional	96.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.84
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.81
PRK12828	239	short chain dehydrogenase; Provisional	96.81
PRK06180	277	short chain dehydrogenase; Provisional	96.81
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.79
PRK06500	249	short chain dehydrogenase; Provisional	96.79
PRK12829	264	short chain dehydrogenase; Provisional	96.79
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.79
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.78
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.78
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.77
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.77
PRK05867	253	short chain dehydrogenase; Provisional	96.77
PLN03209	576	translocon at the inner envelope of chloroplast su	96.76
PRK06196	315	oxidoreductase; Provisional	96.75
PRK07831	262	short chain dehydrogenase; Provisional	96.74
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.74
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.73
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.69
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.69
PRK07062	265	short chain dehydrogenase; Provisional	96.69
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	96.68
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.68
PRK07832	272	short chain dehydrogenase; Provisional	96.67
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.67
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.67
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.67
PRK07774	250	short chain dehydrogenase; Provisional	96.67
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.64
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.64
PRK07478	254	short chain dehydrogenase; Provisional	96.63
PRK08589	272	short chain dehydrogenase; Validated	96.62
PRK06198	260	short chain dehydrogenase; Provisional	96.62
PRK06128	300	oxidoreductase; Provisional	96.62
PRK08862	227	short chain dehydrogenase; Provisional	96.59
PRK07574	385	formate dehydrogenase; Provisional	96.59
PRK06194	287	hypothetical protein; Provisional	96.58
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.58
PRK09072	263	short chain dehydrogenase; Provisional	96.58
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.57
PRK07576	264	short chain dehydrogenase; Provisional	96.57
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.56
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.56
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.54
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.54
PRK08226	263	short chain dehydrogenase; Provisional	96.54
PRK08643	256	acetoin reductase; Validated	96.53
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.52
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.52
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.52
PRK08628	258	short chain dehydrogenase; Provisional	96.52
PRK00811	283	spermidine synthase; Provisional	96.52
PRK05854	313	short chain dehydrogenase; Provisional	96.52
PRK05717	255	oxidoreductase; Validated	96.51
PRK07402	196	precorrin-6B methylase; Provisional	96.51
PRK08339	263	short chain dehydrogenase; Provisional	96.48
PRK12937	245	short chain dehydrogenase; Provisional	96.48
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.48
PLN03139	386	formate dehydrogenase; Provisional	96.48
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.47
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.47
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.47
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.46
PRK07035	252	short chain dehydrogenase; Provisional	96.46
PRK07890	258	short chain dehydrogenase; Provisional	96.46
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.45
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.45
PRK08703	239	short chain dehydrogenase; Provisional	96.45
PRK07454	241	short chain dehydrogenase; Provisional	96.45
PRK06138	252	short chain dehydrogenase; Provisional	96.45
PRK06172	253	short chain dehydrogenase; Provisional	96.45
PRK05875	276	short chain dehydrogenase; Provisional	96.44
PRK07063	260	short chain dehydrogenase; Provisional	96.44
PLN02253	280	xanthoxin dehydrogenase	96.44
PRK08267	260	short chain dehydrogenase; Provisional	96.44
PRK06953	222	short chain dehydrogenase; Provisional	96.43
PRK01581	374	speE spermidine synthase; Validated	96.43
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.43
PRK07326	237	short chain dehydrogenase; Provisional	96.42
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.42
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.39
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.39
CHL00194	317	ycf39 Ycf39; Provisional	96.37
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.37
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.37
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.37
PRK08618	325	ornithine cyclodeaminase; Validated	96.36
PRK06483	236	dihydromonapterin reductase; Provisional	96.36
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.36
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.35
PRK00536	262	speE spermidine synthase; Provisional	96.35
PRK04457	262	spermidine synthase; Provisional	96.35
PRK07024	257	short chain dehydrogenase; Provisional	96.33
PLN02780	320	ketoreductase/ oxidoreductase	96.32
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.32
PRK09242	257	tropinone reductase; Provisional	96.32
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.31
PRK07856	252	short chain dehydrogenase; Provisional	96.3
PRK06398	258	aldose dehydrogenase; Validated	96.3
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.3
PRK06197	306	short chain dehydrogenase; Provisional	96.29
PRK04148	134	hypothetical protein; Provisional	96.28
PRK09186	256	flagellin modification protein A; Provisional	96.28
PRK05876	275	short chain dehydrogenase; Provisional	96.27
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.27
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.25
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.24
PRK06181	263	short chain dehydrogenase; Provisional	96.23
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.23
PRK12743	256	oxidoreductase; Provisional	96.23
PRK07904	253	short chain dehydrogenase; Provisional	96.23
PRK07067	257	sorbitol dehydrogenase; Provisional	96.22
PRK06482	276	short chain dehydrogenase; Provisional	96.22
PRK06114	254	short chain dehydrogenase; Provisional	96.22
PRK07985	294	oxidoreductase; Provisional	96.21
PLN02366	308	spermidine synthase	96.21
PRK06720	169	hypothetical protein; Provisional	96.21
PRK08251	248	short chain dehydrogenase; Provisional	96.2
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.19
KOG0725	270	consensus Reductases with broad range of substrate	96.19
PLN02823	336	spermine synthase	96.17
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.16
PRK08263	275	short chain dehydrogenase; Provisional	96.16
PRK13243	333	glyoxylate reductase; Reviewed	96.15
PRK06179	270	short chain dehydrogenase; Provisional	96.15
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.13
PRK06914	280	short chain dehydrogenase; Provisional	96.13
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.12
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.12
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	96.11
PRK06523	260	short chain dehydrogenase; Provisional	96.1
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.09
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.09
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.08
PRK12747	252	short chain dehydrogenase; Provisional	96.07
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.07
PRK08264	238	short chain dehydrogenase; Validated	96.06
PLN02928	347	oxidoreductase family protein	96.05
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.03
KOG1252	362	consensus Cystathionine beta-synthase and related	96.02
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.02
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.99
PRK04266	226	fibrillarin; Provisional	95.98
PRK08317	241	hypothetical protein; Provisional	95.97
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.95
PRK07775	274	short chain dehydrogenase; Provisional	95.94
PRK09134	258	short chain dehydrogenase; Provisional	95.94
PRK09291	257	short chain dehydrogenase; Provisional	95.93
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.9
PRK08303	305	short chain dehydrogenase; Provisional	95.9
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.9
PRK05884	223	short chain dehydrogenase; Provisional	95.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.9
PRK06484	520	short chain dehydrogenase; Validated	95.9
PRK07074	257	short chain dehydrogenase; Provisional	95.89
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.86
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.86
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.86
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.86
PRK06101	240	short chain dehydrogenase; Provisional	95.85
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.85
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.83
PRK05650	270	short chain dehydrogenase; Provisional	95.83
PRK10538	248	malonic semialdehyde reductase; Provisional	95.81
PRK12367	245	short chain dehydrogenase; Provisional	95.79
PRK07791	286	short chain dehydrogenase; Provisional	95.79
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.79
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.74
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.73
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.73
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.72
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.72
PRK06125	259	short chain dehydrogenase; Provisional	95.71
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.7
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.69
PRK12935	247	acetoacetyl-CoA reductase; Provisional	95.67
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.67
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.64
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.64
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.62
PRK09135	249	pteridine reductase; Provisional	95.62
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.6
COG4122	219	Predicted O-methyltransferase [General function pr	95.59
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.58
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.58
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.58
PRK03612	521	spermidine synthase; Provisional	95.57
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.55
PRK07577	234	short chain dehydrogenase; Provisional	95.55
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.55
PRK11207	197	tellurite resistance protein TehB; Provisional	95.54
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.54
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.52
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.52
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.52
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	95.51
PLN02244	340	tocopherol O-methyltransferase	95.5
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.49
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.49
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.48
PLN03075	296	nicotianamine synthase; Provisional	95.48
PRK08328	231	hypothetical protein; Provisional	95.48
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.47
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.47
PRK06701	290	short chain dehydrogenase; Provisional	95.47
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.47
PRK07340	304	ornithine cyclodeaminase; Validated	95.47
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.46
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.46
PRK05855	582	short chain dehydrogenase; Validated	95.45
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	95.45
PRK12744	257	short chain dehydrogenase; Provisional	95.43
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.43
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.43
PRK08278	273	short chain dehydrogenase; Provisional	95.42
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	95.4
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.38
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.38
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.36
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.34
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.32
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.32
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.31
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.29
PLN02476	278	O-methyltransferase	95.28
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.27
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.26
PRK07102	243	short chain dehydrogenase; Provisional	95.26
PRK06940	275	short chain dehydrogenase; Provisional	95.25
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.25
PRK06123	248	short chain dehydrogenase; Provisional	95.24
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.23
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.23
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.22
COG2910	211	Putative NADH-flavin reductase [General function p	95.19
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.16
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.15
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.13
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.11
PRK05599	246	hypothetical protein; Provisional	95.11
PRK12746	254	short chain dehydrogenase; Provisional	95.1
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.1
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.08
PRK06932	314	glycerate dehydrogenase; Provisional	95.06
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.06
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.05
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.05
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	95.04
PRK12480	330	D-lactate dehydrogenase; Provisional	95.02
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.01
PRK06436	303	glycerate dehydrogenase; Provisional	95.0
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.98
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	94.96
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.89
PLN00203	519	glutamyl-tRNA reductase	94.85
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.83
PRK07069	251	short chain dehydrogenase; Validated	94.82
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.81
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.79
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.77
PRK12827	249	short chain dehydrogenase; Provisional	94.77
PRK12824	245	acetoacetyl-CoA reductase; Provisional	94.72
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.69
PRK07201	657	short chain dehydrogenase; Provisional	94.68
PRK10669	558	putative cation:proton antiport protein; Provision	94.68
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.67
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.66
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	94.64
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.64
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.64
KOG1208	314	consensus Dehydrogenases with different specificit	94.62
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.62
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.62
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	94.6
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.53
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.49
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	94.45
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.45
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	94.45
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.41
PRK08219	227	short chain dehydrogenase; Provisional	94.41
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.41
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	94.39
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.39
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.34
PRK14982	340	acyl-ACP reductase; Provisional	94.33
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.33
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.33
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.32
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.29
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	94.28
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.26
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.25
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.18
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.17
PRK08309	177	short chain dehydrogenase; Provisional	94.16

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.1e-54  Score=347.32  Aligned_cols=285  Identities=54%  Similarity=0.932  Sum_probs=261.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      |++|||.+|+|+++|++|+++++||||++.|..+|+.|+.|..|+.|+|+++.+.+.+..+|++++|++.+++.++++|+
T Consensus        63 mvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd  142 (354)
T KOG0024|consen   63 MVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPD  142 (354)
T ss_pred             cccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++|++++|+++++++++|+.+++.+++|+++||+|+|++|+.+...||++|+.+|+.++..+.|+++++++|++.+.+..
T Consensus       143 ~vs~eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~  222 (354)
T KOG0024|consen  143 NVSFEEGALIEPLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSS  222 (354)
T ss_pred             CCchhhcccccchhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887643


Q ss_pred             CCcccHHHHHHHHHH-H-hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          161 TNLQDIAEEVEKIQK-A-MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ...  ..+.+++..+ . +...+|+.|||+|....++.++..++.+|++++.|+.....+++......|++++.|++.+ 
T Consensus       223 ~~~--~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~  300 (354)
T KOG0024|consen  223 HKS--SPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYC  300 (354)
T ss_pred             ccc--cHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeec
Confidence            322  1222332222 1 3356999999999988999999999999999999999999999999999999999999999 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEe
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFN  289 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~  289 (290)
                      ...+..+++++++|++++++++++.|++  +++.+|++.+..++. ..|++++
T Consensus       301 ~~~y~~ai~li~sGki~~k~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  301 NGDYPTAIELVSSGKIDVKPLITHRYKF--DDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             cccHHHHHHHHHcCCcCchhheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence            5599999999999999999999999999  999999999887743 6688876

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.4e-52  Score=345.52  Aligned_cols=274  Identities=30%  Similarity=0.501  Sum_probs=248.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEE-cCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +|||||.+|+|+++|++|++|++||||.+ -...+|++|.+|..|++++|++....+. +++|+|+||+++++++++++|
T Consensus        59 ~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP  137 (339)
T COG1064          59 LIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIP  137 (339)
T ss_pred             ccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECC
Confidence            58999999999999999999999999998 7888999999999999999999888876 589999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++..||++ ....|+|++++...++||++|+|.|.|++|++++|+|+++|+ .|++++++++|.+++++||++++++
T Consensus       138 ~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~  216 (339)
T COG1064         138 EGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN  216 (339)
T ss_pred             CCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence            99999999988 477789999999999999999999999999999999999998 6999999999999999999999987


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CC-ccccchhhhccCcEEEEeee
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HE-MTVPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~  236 (290)
                      ..  ++++.+.+++       .+|++||+++ +..+..+++.|+++|+++.+|... .. ..++...+.++++++.|+..
T Consensus       217 ~~--~~~~~~~~~~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~  286 (339)
T COG1064         217 SS--DSDALEAVKE-------IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLV  286 (339)
T ss_pred             cC--CchhhHHhHh-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEec
Confidence            43  5565555543       2999999999 799999999999999999999774 33 45777778999999999988


Q ss_pred             c-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      . +.++++++++..+|++  ++.+.+.+++  +++++|+++|++++..++.||++
T Consensus       287 g~~~d~~e~l~f~~~g~I--kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         287 GTRADLEEALDFAAEGKI--KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             CCHHHHHHHHHHHHhCCc--eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence            7 8899999999999999  5555457788  99999999999999999999874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-47  Score=325.03  Aligned_cols=279  Identities=31%  Similarity=0.540  Sum_probs=243.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----CCCcccceeEeecCCceE
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCF   76 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~   76 (290)
                      +++|||++|+|+++  ++++|++||+|...+..+|++|.+|..+++++|++...+|..    ..+|+|+||++++++.++
T Consensus        61 ~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  138 (343)
T PRK09880         61 MVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCI  138 (343)
T ss_pred             cccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeE
Confidence            47999999999999  788999999999999999999999999999999988766531    247999999999999999


Q ss_pred             ECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           77 KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        77 ~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      ++|+++++++++...+++++|+++......++++|||+|+|++|++++|+|+++|++.++++++++++.++++++|++.+
T Consensus       139 ~~P~~l~~~~aa~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v  218 (343)
T PRK09880        139 PYPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL  218 (343)
T ss_pred             ECCCCCCHHHHHhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE
Confidence            99999999888877788999999987667789999999999999999999999999778899999999999999999998


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeee
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~  236 (290)
                      ++++.  +++.+    +... .+++|++||++|.+..+..+++.++++|+++.+|.......++...++.+++++.+.+.
T Consensus       219 i~~~~--~~~~~----~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~  291 (343)
T PRK09880        219 VNPQN--DDLDH----YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFR  291 (343)
T ss_pred             ecCCc--ccHHH----Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEee
Confidence            87542  33322    2222 23699999999987788999999999999999997554446666677889999999887


Q ss_pred             cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.++++++++++++|++++.+.++++|++  +|+++|++.+.+++..+|++|++
T Consensus       292 ~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        292 FTEEFNTAVSWLANGVINPLPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             ccccHHHHHHHHHcCCCCchhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            77789999999999999877888999999  99999999999887789999975

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.4e-44  Score=311.57  Aligned_cols=280  Identities=33%  Similarity=0.574  Sum_probs=241.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc-ccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-FATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      .++|||++|+|+++|+++++|++||+|+..+..+|++|++|+.+++++|..... +| ...+|+|+||+.+++++++++|
T Consensus        56 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g-~~~~G~~ae~~~v~~~~~~~~P  134 (339)
T cd08239          56 VIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-WNRDGGHAEYMLVPEKTLIPLP  134 (339)
T ss_pred             ceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccc-cCCCCcceeEEEechHHeEECC
Confidence            368999999999999999999999999999999999999999999999997754 33 3467999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++.+|+.+ .++.|||++++...++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++
T Consensus       135 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~  214 (339)
T cd08239         135 DDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVIN  214 (339)
T ss_pred             CCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEc
Confidence            99999999977 48889999998888899999999999999999999999999965888999999999999999998887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccc-hhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~  237 (290)
                      ++  .++ .+.+.++  +.+.++|++||++|++..+..++++++++|+++.+|..... .+.. ..++.+++++.+.+..
T Consensus       215 ~~--~~~-~~~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~  288 (339)
T cd08239         215 SG--QDD-VQEIREL--TSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYF  288 (339)
T ss_pred             CC--cch-HHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecC
Confidence            53  233 4455444  24568999999999876778899999999999999965432 2332 3467789999998876


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       .++++++++++.+|.+++.+.++++|++  +++++|++.++++. .+|+|++|
T Consensus       289 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         289 SVPDMEECAEFLARHKLEVDRLVTHRFGL--DQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             CHHHHHHHHHHHHcCCCChhHeEEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence             5789999999999999888889999999  99999999998874 79999986

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=7.4e-44  Score=305.77  Aligned_cols=282  Identities=36%  Similarity=0.621  Sum_probs=236.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----CCCcccceeEeecCCceEE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFK   77 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~   77 (290)
                      ++|||++|+|+++| .++.+++||||++.++.+|++|++|..+.+|+|++..+++..    +.+|+|+||+.+|.++.++
T Consensus        58 i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~  136 (350)
T COG1063          58 ILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLA  136 (350)
T ss_pred             ccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCee
Confidence            78999999999999 778899999999999999999999999999999977655432    2689999999999766555


Q ss_pred             C-CCCCChhhhhhhhhhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC
Q 022879           78 L-PDNVSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD  154 (290)
Q Consensus        78 ~-P~~~~~~~aa~~~~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~  154 (290)
                      + |++++.+.|++.+++++++++. ......++.+|+|+|+|++|++++++++.+|+..|++++.+++|++++++ .+++
T Consensus       137 ~~pd~~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~  216 (350)
T COG1063         137 KLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD  216 (350)
T ss_pred             cCCCCCChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe
Confidence            4 7777777788889999998774 33445555599999999999999999999999999999999999999999 5566


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCcEEEE
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVG  233 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~  233 (290)
                      .+++.  ..++....+.++  +++.++|++|||+|.+..+.++++.++++|+++.+|...... .++...++.+++++.|
T Consensus       217 ~~~~~--~~~~~~~~~~~~--t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~g  292 (350)
T COG1063         217 VVVNP--SEDDAGAEILEL--TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRG  292 (350)
T ss_pred             EeecC--ccccHHHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEe
Confidence            55442  222344444343  356689999999999888999999999999999999876655 5667778999999999


Q ss_pred             eee-c-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEeC
Q 022879          234 VFR-Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  290 (290)
Q Consensus       234 ~~~-~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~~  290 (290)
                      ++. . ...++.+++++.+|++++.+.+++.+++  +++++|++.+.+... ..|+++.+
T Consensus       293 s~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         293 SLRPSGREDFERALDLLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             ccCCCCcccHHHHHHHHHcCCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence            965 3 6789999999999999998888888888  999999999987543 66999874

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.2e-43  Score=307.22  Aligned_cols=281  Identities=31%  Similarity=0.483  Sum_probs=240.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC--------------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~   60 (290)
                      +++|||++|+|+++|++++++++||+|++.+..+|+.|.+|+.|++++|+.....+..                    ..
T Consensus        63 ~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g  142 (371)
T cd08281          63 MALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLG  142 (371)
T ss_pred             ccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccC
Confidence            3799999999999999999999999999988889999999999999999876432110                    01


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      .|+|+||+.++++.++++|+++++.+|+.++ .+.|||+++. .+.++++++|||+|+|++|++++|+|+.+|++.|+++
T Consensus       143 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~  222 (371)
T cd08281         143 VSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAV  222 (371)
T ss_pred             cccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEE
Confidence            3799999999999999999999999999774 6788998874 4789999999999999999999999999999668899


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--C
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--E  216 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~  216 (290)
                      +.++++.++++++|++.++++  ..+++.+.+++++  . .++|++|||+|.+..+..+++.++++|+++.+|....  .
T Consensus       223 ~~~~~r~~~a~~~Ga~~~i~~--~~~~~~~~i~~~~--~-~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~  297 (371)
T cd08281         223 DLNEDKLALARELGATATVNA--GDPNAVEQVRELT--G-GGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEAR  297 (371)
T ss_pred             cCCHHHHHHHHHcCCceEeCC--CchhHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCce
Confidence            999999999999999988874  3456666666653  3 3799999999987789999999999999999996542  2


Q ss_pred             ccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          217 MTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       217 ~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ..++...++.+++++.+++..    .++++++++++.+|++++.+.+++.|++  +|+++|++.+.+++..+|+|+
T Consensus       298 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         298 LSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             eeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence            345555678899999998754    4678999999999999888888999999  999999999999988877764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4e-43  Score=303.24  Aligned_cols=282  Identities=30%  Similarity=0.561  Sum_probs=241.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||+|++.+..+|+.|++|..|+.++|......+. ..+|+|+||+.++++.++++|+
T Consensus        55 ~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~  133 (347)
T PRK10309         55 ITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPT  133 (347)
T ss_pred             cccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcC
Confidence            368999999999999999999999999999999999999999999999987665543 4589999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++++|+.++++++++++++...++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++
T Consensus       134 ~~s~~~aa~~~~~~~~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~  213 (347)
T PRK10309        134 DMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR  213 (347)
T ss_pred             CCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc
Confidence            99999999876677788887777889999999999899999999999999997678888999999999999999888743


Q ss_pred             CCcccHHHHHHHHHHHhCCCcc-EEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcccc---chhhhccCcEEEEeee
Q 022879          161 TNLQDIAEEVEKIQKAMGTGID-VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFR  236 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~~~~~  236 (290)
                      .  .+ .+.+.++.  .+.++| ++|||+|.+..+..+++.++++|+++.+|.......++   ...++.+++++.|.+.
T Consensus       214 ~--~~-~~~~~~~~--~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~  288 (347)
T PRK10309        214 E--MS-APQIQSVL--RELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWM  288 (347)
T ss_pred             c--cC-HHHHHHHh--cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEec
Confidence            2  23 33444442  455788 99999998778899999999999999999654332232   2346778899999765


Q ss_pred             c------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 Y------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .      .++++++++++++|.+++++.+++.|++  +|+++|++.+.+++..||+|+++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             cccCCcchhHHHHHHHHHHcCCCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            3      3678999999999999888889999999  99999999999988889999875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.9e-44  Score=288.21  Aligned_cols=278  Identities=27%  Similarity=0.444  Sum_probs=234.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEE-cCCcCCCCChhhcCCCCCCCCCCccc-cC-----CCCCcccceeEeecCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFF-AT-----PPVHGSLANQVVHPAD   73 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~g~~~e~~~v~~~   73 (290)
                      +|+|||.+|+|+++|++|++|++||+|-+ ..+..|..|++|..+.+++|+..-+. ..     ..++|+||+|+++++.
T Consensus        67 lV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~  146 (360)
T KOG0023|consen   67 LVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEV  146 (360)
T ss_pred             ccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeee
Confidence            68999999999999999999999999965 56789999999999999999954222 12     2345669999999999


Q ss_pred             ceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHc
Q 022879           74 LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEI  151 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~l  151 (290)
                      +++++|++++.+.||++. ..-|+|..+...++.||+++.|.|+|++|.+++|+|+++|. +|++++++. +|.+.++.|
T Consensus       147 ~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L  225 (360)
T KOG0023|consen  147 FAIKIPENLPLASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL  225 (360)
T ss_pred             eEEECCCCCChhhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence            999999999999999885 44579999998889999999999997799999999999999 688888887 778888999


Q ss_pred             CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEE
Q 022879          152 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  231 (290)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i  231 (290)
                      |++..++. ..++++.+.+.+.   .+.++|-+.+-  ....+..++.+++.+|++|.+|.......++..++.++.+.|
T Consensus       226 GAd~fv~~-~~d~d~~~~~~~~---~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I  299 (360)
T KOG0023|consen  226 GADVFVDS-TEDPDIMKAIMKT---TDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSI  299 (360)
T ss_pred             CcceeEEe-cCCHHHHHHHHHh---hcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEE
Confidence            99998874 3356776666553   23334444433  456788999999999999999988877888899999999999


Q ss_pred             EEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          232 VGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       232 ~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .|+.-. +.+.++++++..+|.+  ++.+ +..++  +++++|+++|++++...|.|+++
T Consensus       300 ~GS~vG~~ket~E~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  300 KGSIVGSRKETQEALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             EeeccccHHHHHHHHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence            999876 8899999999999999  4444 45678  99999999999999888988864

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=1.6e-43  Score=287.12  Aligned_cols=282  Identities=29%  Similarity=0.486  Sum_probs=242.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc-------cC-----------CCCC-
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF-------AT-----------PPVH-   61 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----------~~~~-   61 (290)
                      +++|||++|+|++||++|++++|||+|+...+..|++|.+|..+++|+|......       .+           .... 
T Consensus        57 ~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG  136 (366)
T COG1062          57 AVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLG  136 (366)
T ss_pred             eecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeec
Confidence            4799999999999999999999999999999999999999999999999933111       10           1222 


Q ss_pred             -cccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           62 -GSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        62 -g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                       ++|+||.++++..+++++++.+++.++++ ....|.+-++. .+++++|+++.|.|.|++|++++|=|+..|+++++++
T Consensus       137 ~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAv  216 (366)
T COG1062         137 CSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAV  216 (366)
T ss_pred             cccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEE
Confidence             49999999999999999999999999988 47777887664 4899999999999999999999999999999999999


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM  217 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  217 (290)
                      +.+++|++++++||++++++.  .+. +..+.+.+++   +.+.|.+|||+|..+.+++++.++.++|+.+.+|......
T Consensus       217 D~~~~Kl~~A~~fGAT~~vn~--~~~~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~  291 (366)
T COG1062         217 DINPEKLELAKKFGATHFVNP--KEVDDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQ  291 (366)
T ss_pred             eCCHHHHHHHHhcCCceeecc--hhhhhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence            999999999999999999873  333 5767776663   4589999999999999999999999999999999877655


Q ss_pred             cccchhhh-ccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          218 TVPLTPAA-VREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       218 ~~~~~~~~-~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .++.+.+. .....|.|++..    +.++..+++++.+|++++.+.+++.++|  +|+++||+.|.+++. .|.||++
T Consensus       292 ~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~-IR~Vi~~  366 (366)
T COG1062         292 EISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKS-IRSVIRF  366 (366)
T ss_pred             eeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCce-eeEEecC
Confidence            55555532 233788888765    7799999999999999999999999888  999999999999844 5777764

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.9e-42  Score=301.41  Aligned_cols=283  Identities=23%  Similarity=0.400  Sum_probs=236.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc----------------cC----CCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----------------AT----PPVH   61 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~----~~~~   61 (290)
                      ++|||++|+|+++|+++++|++||+|++.+..+|+.|.+|+.+++++|+.....                |.    ...+
T Consensus        66 i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  145 (378)
T PLN02827         66 IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAV  145 (378)
T ss_pred             eecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCccccccccc
Confidence            689999999999999999999999999998889999999999999999874221                00    0124


Q ss_pred             cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      |+|+||+.+++..++++|+++++++++.++ .+.++|+++. .+++++|++|||+|+|++|++++|+|+++|++.+++++
T Consensus       146 G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~  225 (378)
T PLN02827        146 SSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVD  225 (378)
T ss_pred             ccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence            899999999999999999999999888774 6677887664 47889999999999999999999999999997788888


Q ss_pred             CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCCcc
Q 022879          140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMT  218 (290)
Q Consensus       140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~  218 (290)
                      .++++.++++++|++.++++...++++.+.+++++  . .++|++||++|.+..+..+++.++++ |+++.+|.......
T Consensus       226 ~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~  302 (378)
T PLN02827        226 INPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMT--G-GGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPE  302 (378)
T ss_pred             CCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCcc
Confidence            89999999999999988875432345666666653  3 37999999999877889999999998 99999997543333


Q ss_pred             ccc-hhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          219 VPL-TPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       219 ~~~-~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.. ..++.+++++.|....    ..+++++++++++|++++.+.++++|++  +++++|++.+.+++. .|.||.+
T Consensus       303 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        303 VSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             ccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence            333 3467899999988653    3578899999999999776689999998  999999999998865 6999875

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.7e-42  Score=302.49  Aligned_cols=284  Identities=27%  Similarity=0.464  Sum_probs=237.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC-----------------------
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------   57 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------   57 (290)
                      .++|||++|+|+++|+++++|++||||++.+..+|++|.+|..+.+++|+.....+.                       
T Consensus        67 ~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  146 (381)
T PLN02740         67 RILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYH  146 (381)
T ss_pred             ccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccc
Confidence            378999999999999999999999999999999999999999999999998653211                       


Q ss_pred             CCCCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeE
Q 022879           58 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRI  135 (290)
Q Consensus        58 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~v  135 (290)
                      ...+|+|+||+++++++++++|+++++++++.++ .+.|+|+++. .+++++|++|||+|+|++|++++|+|+.+|++.|
T Consensus       147 ~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~V  226 (381)
T PLN02740        147 FLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKI  226 (381)
T ss_pred             cccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcE
Confidence            0125999999999999999999999999988774 7788998764 4889999999999999999999999999999668


Q ss_pred             EEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCC
Q 022879          136 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGH  214 (290)
Q Consensus       136 v~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  214 (290)
                      +++++++++.++++++|++.++++...++++.+.++++.  .+ ++|++||++|.+..+..++..++++ |+++.+|...
T Consensus       227 i~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~--~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~  303 (381)
T PLN02740        227 IGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMT--GG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHP  303 (381)
T ss_pred             EEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHh--CC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCC
Confidence            899999999999999999988875433335666666653  33 7999999999878899999999886 9999999654


Q ss_pred             CCccccchhh-hccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          215 HEMTVPLTPA-AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       215 ~~~~~~~~~~-~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ....++.... +.+++++.|++..    ...+.++++++.+|.+++.+.++++|++  +|+++|++.+.+++. .|++|+
T Consensus       304 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~  380 (381)
T PLN02740        304 TPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLH  380 (381)
T ss_pred             CCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEe
Confidence            3322333332 3467888887653    3468899999999999877788999999  999999999988754 699987


Q ss_pred             C
Q 022879          290 L  290 (290)
Q Consensus       290 ~  290 (290)
                      +
T Consensus       381 ~  381 (381)
T PLN02740        381 L  381 (381)
T ss_pred             C
Confidence            4

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=4.5e-42  Score=298.45  Aligned_cols=282  Identities=26%  Similarity=0.413  Sum_probs=231.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC-----------------CCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVH   61 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~   61 (290)
                      ++|||++|+|+++|+++++|++||||++.+..+|++|.+|+.+++++|.+....   +.                 ...+
T Consensus        58 i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~  137 (368)
T TIGR02818        58 ILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGC  137 (368)
T ss_pred             eeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccC
Confidence            789999999999999999999999999998899999999999999999875321   00                 0014


Q ss_pred             cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      |+|+||+.+++++++++|+++++++++.++ ++.|+|+++. .++++++++|||+|+|++|++++|+|+.+|+++|++++
T Consensus       138 G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~  217 (368)
T TIGR02818       138 STFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAID  217 (368)
T ss_pred             ccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence            799999999999999999999999999875 7889999874 47899999999999999999999999999996689999


Q ss_pred             CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC--
Q 022879          140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE--  216 (290)
Q Consensus       140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--  216 (290)
                      .++++.++++++|++.++++....+++.+.+++++  . .++|++||++|.+..+..++++++++ |+++.+|.....  
T Consensus       218 ~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~  294 (368)
T TIGR02818       218 INPAKFELAKKLGATDCVNPNDYDKPIQEVIVEIT--D-GGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQE  294 (368)
T ss_pred             CCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHh--C-CCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCc
Confidence            99999999999999988875432345556666553  3 37999999999877889999999886 999999965322  


Q ss_pred             ccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          217 MTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       217 ~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ..+....+. +...+.+....    +.+++++++++.+|++++++.+++.|+|  +|+++|++.+.+++ ..|++|++
T Consensus       295 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~  368 (368)
T TIGR02818       295 ISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY  368 (368)
T ss_pred             ccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence            222222233 23446665432    4578999999999999888889999999  99999999998774 47999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=7.2e-43  Score=292.65  Aligned_cols=260  Identities=25%  Similarity=0.394  Sum_probs=220.7

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC------CCCcccceeEe
Q 022879            2 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV   69 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~   69 (290)
                      |+|||++|+|+++|++|+      +|++||||++.+..+|++|.+|+.+++++|++..++|..      ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            689999999999999999      899999999999999999999999999999987765432      24799999999


Q ss_pred             ecCC-ceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 022879           70 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  147 (290)
Q Consensus        70 v~~~-~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  147 (290)
                      ++++ .++++|+++++++++.++ .+.|++++++.....++++|||+|+|++|++++|+|+.+|++++++++.+++|.++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            9997 799999999999998774 67889999877666799999999999999999999999999768888899999999


Q ss_pred             HHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--CCccccchhhh
Q 022879          148 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAA  225 (290)
Q Consensus       148 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~  225 (290)
                      ++++|++.+++..    +..+.+.++  +.+.++|++||++|.+..+..+++.++++|+++.+|...  ....++...++
T Consensus       161 a~~~Ga~~~i~~~----~~~~~~~~~--~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~  234 (280)
T TIGR03366       161 ALSFGATALAEPE----VLAERQGGL--QNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV  234 (280)
T ss_pred             HHHcCCcEecCch----hhHHHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence            9999998887632    223344443  245689999999998788899999999999999999643  23355666788


Q ss_pred             ccCcEEEEeeec-CCcHHHHHHHHHcC--CCCCCCceeeEeeCChhh
Q 022879          226 VREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE  269 (290)
Q Consensus       226 ~~~~~i~~~~~~-~~~l~~~~~~~~~g--~~~~~~~~~~~~~~~~~~  269 (290)
                      .+++++.+++.. .++++++++++.++  ++++++.+++.|++  +|
T Consensus       235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~  279 (280)
T TIGR03366       235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD  279 (280)
T ss_pred             hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence            899999998876 56899999999985  55566788888887  65

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=5.1e-42  Score=297.35  Aligned_cols=282  Identities=29%  Similarity=0.468  Sum_probs=237.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--------cC----CCCCcccceeE
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQV   68 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~e~~   68 (290)
                      +++|||++|+|+++|+++++|++||+|++.+..+|+.|.+|..+++++|......        |.    ...+|+|+||+
T Consensus        56 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~  135 (358)
T TIGR03451        56 FLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKT  135 (358)
T ss_pred             cccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceE
Confidence            3789999999999999999999999999999999999999999999999853211        10    01359999999


Q ss_pred             eecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879           69 VHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS  146 (290)
Q Consensus        69 ~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~  146 (290)
                      .+++.+++++|+++++++|+.++ .+.++|+++. .+.++++++|||+|+|++|++++|+|+.+|+++++++++++++.+
T Consensus       136 ~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~  215 (358)
T TIGR03451       136 LVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE  215 (358)
T ss_pred             EEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            99999999999999999988775 6778887764 478899999999999999999999999999976899999999999


Q ss_pred             HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhh
Q 022879          147 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPA  224 (290)
Q Consensus       147 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~  224 (290)
                      +++++|++.++++.  .+++.+.+++..  .+.++|++|||+|.+..+..+++.++++|+++.+|.....  ..++...+
T Consensus       216 ~~~~~Ga~~~i~~~--~~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~  291 (358)
T TIGR03451       216 WAREFGATHTVNSS--GTDPVEAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDV  291 (358)
T ss_pred             HHHHcCCceEEcCC--CcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHH
Confidence            99999999888743  456666666553  4567999999999877889999999999999999975432  23444567


Q ss_pred             hccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          225 AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       225 ~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      +.+++++.+.+..    .++++++++++++|++++.+.+++.|++  +|+++|++.+.+++.. |+++.
T Consensus       292 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       292 FGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             hhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEe
Confidence            7788999887532    5678999999999999877788999999  9999999999888554 77775

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.6e-41  Score=293.74  Aligned_cols=282  Identities=39%  Similarity=0.673  Sum_probs=245.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|+..+..+|+.|.+|+.++.++|..+.+.+....+|+|+||+.++.+.++++|++
T Consensus        67 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~  146 (351)
T cd08233          67 TLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDN  146 (351)
T ss_pred             eecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCC
Confidence            68999999999999999999999999999999999999999999999998765543233799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++.+++.+.++.+||+++..++++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++. 
T Consensus       147 ~~~~~aa~~~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~-  225 (351)
T cd08233         147 VPLEEAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPT-  225 (351)
T ss_pred             CCHHHhhhccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC-
Confidence            9999998777788999999778899999999999899999999999999997788888999999999999999888743 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CCc
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNT  240 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~  240 (290)
                       ..++.+.++++.  .++++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+.+.+ .++
T Consensus       226 -~~~~~~~l~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  302 (351)
T cd08233         226 -EVDVVAEVRKLT--GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTRED  302 (351)
T ss_pred             -ccCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcch
Confidence             456777776653  4567999999999767889999999999999999976544456666678899999998766 688


Q ss_pred             HHHHHHHHHcCCCCCCCceeeEeeCChhhH-HHHHHHHhcCCC-ceeEEEe
Q 022879          241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEV-EEAFETSARGGT-AIKVMFN  289 (290)
Q Consensus       241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~-~gk~vl~  289 (290)
                      ++++++++++|.+++.+.+++.|++  +|+ ++|++.+.+++. .+|+||.
T Consensus       303 ~~~~~~~~~~g~l~~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         303 FEEVIDLLASGKIDAEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999777778888888  996 789999988876 4999974

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.3e-41  Score=293.79  Aligned_cols=282  Identities=23%  Similarity=0.445  Sum_probs=239.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|++++.+ +||+|++.+..+|++|..|+.+++++|......|. ..+|+|+||+.+++++++++|+
T Consensus        55 ~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~  132 (349)
T TIGR03201        55 LALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDE  132 (349)
T ss_pred             eeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCc
Confidence            368999999999999999887 99999999999999999999999999998766553 3579999999999999999999


Q ss_pred             ------CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           81 ------NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        81 ------~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                            +++++.++.+ ..+.++|+++....++++++|+|+|+|++|++++|+|+.+|+ .++++++++++.++++++|+
T Consensus       133 ~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga  211 (349)
T TIGR03201       133 ARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGA  211 (349)
T ss_pred             ccccccCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCC
Confidence                  8998888866 588899999887888999999999999999999999999999 58889999999999999999


Q ss_pred             CEEEecCCCc-ccHHHHHHHHHHHhCCCcc----EEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccC
Q 022879          154 DNIVKVSTNL-QDIAEEVEKIQKAMGTGID----VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE  228 (290)
Q Consensus       154 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  228 (290)
                      +.++++...+ +++.+.+++++  .+.++|    ++|||+|.+..+..++++++++|+++.+|.......++...++.+.
T Consensus       212 ~~~i~~~~~~~~~~~~~~~~~t--~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~  289 (349)
T TIGR03201       212 DLTLNPKDKSAREVKKLIKAFA--KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFH  289 (349)
T ss_pred             ceEecCccccHHHHHHHHHhhc--ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcc
Confidence            8887753321 24555555543  455676    8999999877888899999999999999976544455555667778


Q ss_pred             cEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          229 VDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       229 ~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .++.+.+.. ..+++++++++++|++++.+.++ .|++  +|+++|++.+.+++..+|+++++
T Consensus       290 ~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       290 ARALGNWGCPPDRYPAALDLVLDGKIQLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             cEEEEEecCCHHHHHHHHHHHHcCCCCcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence            888888764 56799999999999997766665 6788  99999999999998889999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.4e-41  Score=294.24  Aligned_cols=275  Identities=21%  Similarity=0.357  Sum_probs=224.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPAD   73 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~   73 (290)
                      +++|||++|+|+++|+++++|++||+|++.+. .+|++|.+|+.|++++|++..+..      +...+|+|+||+.++++
T Consensus        68 ~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~  147 (360)
T PLN02586         68 IVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQH  147 (360)
T ss_pred             ccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchH
Confidence            37899999999999999999999999986544 479999999999999999765431      12247999999999999


Q ss_pred             ceEECCCCCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHH
Q 022879           74 LCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKE  150 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~  150 (290)
                      +++++|+++++++|+.++ .+.|+|+++.. ...+++++|||.|+|++|++++|+|+.+|++ +++++.++ ++.+.+++
T Consensus       148 ~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~  226 (360)
T PLN02586        148 FVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINR  226 (360)
T ss_pred             HeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHh
Confidence            999999999999999774 67788988865 5568999999999999999999999999995 66665554 44567788


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  230 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  230 (290)
                      +|++.++++..  .   +.+++..    .++|++||++|.+..+..++++++++|+++.+|.......++...++.+...
T Consensus       227 ~Ga~~vi~~~~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~  297 (360)
T PLN02586        227 LGADSFLVSTD--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKL  297 (360)
T ss_pred             CCCcEEEcCCC--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeE
Confidence            99988876432  1   2343332    2699999999986788999999999999999996544445666667778888


Q ss_pred             EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+.+.. ..+++++++++.+|+++  +.+ +.|++  +|+++|++.+.+++..+|+|+++
T Consensus       298 i~g~~~~~~~~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        298 VGGSDIGGIKETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             EEEcCcCCHHHHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence            8887654 45789999999999995  344 47888  99999999999998889999874

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3.1e-41  Score=293.73  Aligned_cols=283  Identities=26%  Similarity=0.467  Sum_probs=234.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC------------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PP   59 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~   59 (290)
                      +++|||++|+|+++|+++++|++||+|++.+..+|++|.+|..++++.|......   +.                  ..
T Consensus        58 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~  137 (369)
T cd08301          58 RILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFV  137 (369)
T ss_pred             cccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeee
Confidence            3789999999999999999999999999999999999999999999999976422   00                  01


Q ss_pred             CCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879           60 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI  137 (290)
Q Consensus        60 ~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~  137 (290)
                      ..|+|+||+.+++.+++++|+++++++++.++ .+.|+|+++. .+++++|++|||+|+|++|++++|+|+.+|+..+++
T Consensus       138 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~  217 (369)
T cd08301         138 GTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIG  217 (369)
T ss_pred             ccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence            34899999999999999999999999998774 6788998764 478999999999999999999999999999966899


Q ss_pred             EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC
Q 022879          138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE  216 (290)
Q Consensus       138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~  216 (290)
                      +++++++.++++++|++.++++...++++.+.++++.   +.++|++||++|.+..+..++++++++ |+++.+|.....
T Consensus       218 ~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~  294 (369)
T cd08301         218 VDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD  294 (369)
T ss_pred             EcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC
Confidence            9999999999999999888875432234555565553   347999999999877888999999996 999999975432


Q ss_pred             ccccchh-hhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          217 MTVPLTP-AAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       217 ~~~~~~~-~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ..++... .+.+++++.|++..    +.+++++++++.+|.+++.+.+++.|++  +|+++|++.+.+++. .|++|+
T Consensus       295 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~  369 (369)
T cd08301         295 AVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH  369 (369)
T ss_pred             cccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence            2333322 23468899887643    4578999999999999877788899999  999999999998865 488874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.7e-41  Score=294.72  Aligned_cols=283  Identities=22%  Similarity=0.418  Sum_probs=224.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc------ccC---CCCCcccceeEeec
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------FAT---PPVHGSLANQVVHP   71 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~g~~~e~~~v~   71 (290)
                      +++|||++|+|+++|++|++|++||||.+.+..+|++|.+|+.|++++|.....      ++.   ...+|+|+||+.++
T Consensus        63 ~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~  142 (393)
T TIGR02819        63 LVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVP  142 (393)
T ss_pred             ccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEec
Confidence            479999999999999999999999999999999999999999999999997531      221   12469999999999


Q ss_pred             CC--ceEECCCCCCh----hhhhh-hhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879           72 AD--LCFKLPDNVSL----EEGAM-CEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus        72 ~~--~~~~~P~~~~~----~~aa~-~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      +.  .++++|++++.    ..++. ..++.++|+++...+++++++|||.|+|++|++++|+|+.+|++.+++++.++++
T Consensus       143 ~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r  222 (393)
T TIGR02819       143 YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPAR  222 (393)
T ss_pred             hhhCceEECCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHH
Confidence            64  69999998753    23343 4688899999887889999999998889999999999999999767777788999


Q ss_pred             HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH--------------HHHHHHHHHhccCCEEEEe
Q 022879          145 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       145 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~  210 (290)
                      .++++++|++. +++ ....++.+.+.+++  .+.++|++||++|.+              ..+.++++.++++|+++.+
T Consensus       223 ~~~a~~~Ga~~-v~~-~~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~  298 (393)
T TIGR02819       223 LAQARSFGCET-VDL-SKDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIP  298 (393)
T ss_pred             HHHHHHcCCeE-Eec-CCcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEe
Confidence            99999999974 432 22345666666543  456799999999975              4789999999999999999


Q ss_pred             ccCC-CCc-c-----------ccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCcee-eEeeCChhhHHHHHH
Q 022879          211 GMGH-HEM-T-----------VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFE  275 (290)
Q Consensus       211 g~~~-~~~-~-----------~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~a~~  275 (290)
                      |... ... .           +.....+.+++++.+.... .+.+.++++++.+|++++.+.++ +.|++  +|+++|++
T Consensus       299 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~  376 (393)
T TIGR02819       299 GLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYA  376 (393)
T ss_pred             eecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHH
Confidence            9752 111 1           1122344566666664333 23347899999999998766676 67888  99999999


Q ss_pred             HHhcCCCceeEEEeC
Q 022879          276 TSARGGTAIKVMFNL  290 (290)
Q Consensus       276 ~~~~~~~~gk~vl~~  290 (290)
                      .+.++ ..+|++|++
T Consensus       377 ~~~~~-~~~Kvvi~~  390 (393)
T TIGR02819       377 EFDAG-AAKKFVIDP  390 (393)
T ss_pred             HHhhC-CceEEEEeC
Confidence            99887 458999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.6e-41  Score=292.55  Aligned_cols=274  Identities=19%  Similarity=0.330  Sum_probs=226.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCCc
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADL   74 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~   74 (290)
                      ++|||++|+|+++|+++++|++||+|++.+.. +|++|.+|+.|++++|++.....      +...+|+|+||+.+++++
T Consensus        63 i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~  142 (375)
T PLN02178         63 IPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF  142 (375)
T ss_pred             ccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH
Confidence            68999999999999999999999999876554 69999999999999999865321      112369999999999999


Q ss_pred             eEECCCCCChhhhhhhh-hhHHHHHHHHhcC--CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHH
Q 022879           75 CFKLPDNVSLEEGAMCE-PLSVGVHACRRAN--IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKE  150 (290)
Q Consensus        75 ~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~--~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~  150 (290)
                      ++++|+++++++|++++ ...|+|+++....  .+++++|+|.|+|++|++++|+|+++|++ +++++.++ ++.+++++
T Consensus       143 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~  221 (375)
T PLN02178        143 VLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDR  221 (375)
T ss_pred             eEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHh
Confidence            99999999999998774 6678898886533  36899999999999999999999999995 67776654 45788899


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  230 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  230 (290)
                      +|+++++++..  .   +.+.+..    .++|++||++|.+..+..++++++++|+++.+|.......++...++.++++
T Consensus       222 lGa~~~i~~~~--~---~~v~~~~----~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~  292 (375)
T PLN02178        222 LGADSFLVTTD--S---QKMKEAV----GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKM  292 (375)
T ss_pred             CCCcEEEcCcC--H---HHHHHhh----CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeE
Confidence            99998876432  1   2344332    2699999999986688999999999999999997544445666677889999


Q ss_pred             EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.|++.. ..+++++++++++|+++  +.+ +.|+|  +|+++|++.+.+++..||+|+.+
T Consensus       293 i~g~~~~~~~~~~~~~~l~~~g~i~--~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        293 VGGSQIGGMKETQEMLEFCAKHKIV--SDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             EEEeCccCHHHHHHHHHHHHhCCCc--ccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            9998765 46789999999999994  444 56888  99999999999998889999874

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=8.8e-41  Score=290.56  Aligned_cols=283  Identities=27%  Similarity=0.457  Sum_probs=230.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC-----------------CCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~   60 (290)
                      +++|||++|+|+++|+++++|++||+|++.+..+|++|.+|+.+++++|.+....   |.                 ...
T Consensus        58 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~  137 (368)
T cd08300          58 VILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMG  137 (368)
T ss_pred             ceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccc
Confidence            3789999999999999999999999999998899999999999999999875321   00                 012


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      .|+|+||+.++++.++++|+++++.+++.++ .+.|+|+++. .+.++++++|||+|+|++|++++|+|+.+|++.++++
T Consensus       138 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~  217 (368)
T cd08300         138 TSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGI  217 (368)
T ss_pred             cccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence            4799999999999999999999999998775 7789999874 4789999999999999999999999999999668999


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCCc
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEM  217 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~  217 (290)
                      ++++++.++++++|++.++++...++++.+.+++++  . .++|++||++|.+..+..++++++++ |+++.+|......
T Consensus       218 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~  294 (368)
T cd08300         218 DINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMT--D-GGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQ  294 (368)
T ss_pred             eCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHh--C-CCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCC
Confidence            999999999999999998875433335667776653  3 38999999999877889999999886 9999999653211


Q ss_pred             cccchhh-hccCcEEEEeee----cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          218 TVPLTPA-AVREVDVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       218 ~~~~~~~-~~~~~~i~~~~~----~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .++...+ ..+...+.+...    ...+++++++++++|++++.+.++++|+|  +|+++|++.+.+++ ..|++++
T Consensus       295 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~-~~k~~~~  368 (368)
T cd08300         295 EISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGK-SIRTVVK  368 (368)
T ss_pred             ccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCC-CceeeeC
Confidence            2222221 122345555432    25678899999999999877888999999  99999999998875 4698875

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.6e-40  Score=287.30  Aligned_cols=282  Identities=27%  Similarity=0.473  Sum_probs=234.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC-------------------CCCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVH   61 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~   61 (290)
                      +++|||++|+|+++|++++++++||+|++.+...|+.|.+|..+++++|++...++.                   ....
T Consensus        57 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  136 (365)
T cd08277          57 VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGT  136 (365)
T ss_pred             eecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCccccccccc
Confidence            368999999999999999999999999998889999999999999999987643211                   0125


Q ss_pred             cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      |+|+||+.+++++++++|+++++++++.++ .+.|||+++ +.+.++++++|||+|+|++|++++|+|+.+|+..+++++
T Consensus       137 g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~  216 (365)
T cd08277         137 STFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVD  216 (365)
T ss_pred             ccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence            899999999999999999999999999875 788999886 457899999999999899999999999999997788999


Q ss_pred             CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCC-Cc
Q 022879          140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EM  217 (290)
Q Consensus       140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~  217 (290)
                      +++++.++++++|++++++....+.++.+.+++++  . .++|++||++|.+..+..++++++++ |+++.+|.... ..
T Consensus       217 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~--~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~  293 (365)
T cd08277         217 INEDKFEKAKEFGATDFINPKDSDKPVSEVIREMT--G-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL  293 (365)
T ss_pred             CCHHHHHHHHHcCCCcEeccccccchHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcccc
Confidence            99999999999999888875433334555666553  2 57999999999877888999999885 99999996542 22


Q ss_pred             cccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          218 TVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       218 ~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .++...+.. ++++.+++..    +.+++++++++.++.+++.+.+++.|++  +|+++|++.+.+++ ..|++++
T Consensus       294 ~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         294 SIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             ccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence            334434443 7888887654    3578999999999998888889999999  99999999998876 5698874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.7e-40  Score=284.20  Aligned_cols=267  Identities=22%  Similarity=0.274  Sum_probs=229.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|+++++|++||+|++.+. ..|+.|.+|..+++++|+.+..+|. ..+|+|+||+.+++.+++++|
T Consensus        58 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP  136 (329)
T TIGR02822        58 VTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLP  136 (329)
T ss_pred             ccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECC
Confidence            37899999999999999999999999987654 4699999999999999998876653 457999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++.+++.+ ..+.|||+++..+++++|++|||+|+|++|++++|+|+.+|+ .++++++++++.++++++|++++++
T Consensus       137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~  215 (329)
T TIGR02822       137 TGYDDVELAPLLCAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGG  215 (329)
T ss_pred             CCCCHHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecc
Confidence            99999999866 578899999977889999999999999999999999999999 5888889999999999999998876


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +..  .            ...++|+++++.+....+..+++.++++|+++.+|.... ...++...++.+++++.+.+..
T Consensus       216 ~~~--~------------~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  281 (329)
T TIGR02822       216 AYD--T------------PPEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN  281 (329)
T ss_pred             ccc--c------------CcccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC
Confidence            321  1            123689999988877889999999999999999996432 2245555667788999888765


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                       +..+.++++++.+|+++   .+++.|+|  +|+++|++.+.+++..||+||
T Consensus       282 ~~~~~~~~~~l~~~g~i~---~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       282 TRADAREFLELAAQHGVR---VTTHTYPL--SEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             CHHHHHHHHHHHHhCCCe---eEEEEEeH--HHHHHHHHHHHcCCCceEEEe
Confidence             56788899999999984   35788888  999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=9.9e-40  Score=283.82  Aligned_cols=288  Identities=89%  Similarity=1.417  Sum_probs=245.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|++.+..+|++|..|..|..++|+....++....+|+|+||+.+++..++++|++
T Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~  155 (364)
T PLN02702         76 VIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPEN  155 (364)
T ss_pred             ccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCC
Confidence            68999999999999999999999999999999999999999999999998655544445799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++.+++...+++++++++...++.+++++||+|+|++|++++++++.+|++.++++++++++.+.++++|++.+++++.
T Consensus       156 l~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~  235 (364)
T PLN02702        156 VSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST  235 (364)
T ss_pred             CCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCc
Confidence            99999986556667888886688899999999988999999999999999977888888999999999999998877654


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCcH
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  241 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l  241 (290)
                      ...++.+.+.++.+..+.++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+.+.....+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (364)
T PLN02702        236 NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTW  315 (364)
T ss_pred             ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHH
Confidence            45567777766543345679999999997678899999999999999999643333445556778899999887666788


Q ss_pred             HHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          242 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      +.++++++++.+.+.+.+.+.|+++++++++|++.+.+++..+|+++.
T Consensus       316 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        316 PLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            999999999998655567778777668999999999888788999985

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=2.4e-40  Score=280.43  Aligned_cols=255  Identities=31%  Similarity=0.434  Sum_probs=212.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +|||.|++|+|+++|++|++|++||||+... .                        ...+|+|+||+.+++++++++|+
T Consensus        59 ~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~------------------------~~~~G~~AEy~~v~a~~~~~~P~  113 (326)
T COG0604          59 FIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-G------------------------VGRDGGYAEYVVVPADWLVPLPD  113 (326)
T ss_pred             CcccceeEEEEEEeCCCCCCcCCCCEEEEcc-C------------------------CCCCCcceeEEEecHHHceeCCC
Confidence            5899999999999999999999999999742 0                        00469999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.++ .+.|||+++.. .++++|++|||+|+ |++|.+++|||+++|+ .++++.+++++.++++++|+++++
T Consensus       114 ~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi  192 (326)
T COG0604         114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVI  192 (326)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEE
Confidence            99999999884 88899999976 88999999999986 9999999999999998 455665777777799999999999


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--CCccccchhhhccCcEEEEee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVF  235 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~  235 (290)
                      +|.  +++|.+.+++++  ++.++|+|||++|+ +.+..+++.|+++|+++.+|...  ....++...+..+.+...+..
T Consensus       193 ~y~--~~~~~~~v~~~t--~g~gvDvv~D~vG~-~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~  267 (326)
T COG0604         193 NYR--EEDFVEQVRELT--GGKGVDVVLDTVGG-DTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT  267 (326)
T ss_pred             cCC--cccHHHHHHHHc--CCCCceEEEECCCH-HHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence            854  456999998874  56789999999997 68888999999999999999755  233455556677788877776


Q ss_pred             ec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhc-CCCceeEEEeC
Q 022879          236 RY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL  290 (290)
Q Consensus       236 ~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vl~~  290 (290)
                      ..       .+.++++++++.+|.+  ++.++.+|++  ++..++...... ++..||+||++
T Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         268 LGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             ceecchHHHHHHHHHHHHHHHcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence            54       3578889999999999  7778888999  995555444333 57899999975

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=7.4e-40  Score=283.62  Aligned_cols=273  Identities=29%  Similarity=0.435  Sum_probs=220.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCCceEECC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      ++|||++|+|+++|++ +.|++||||+..+..+|+.|.+|..+++++|+....+  |....+|+|+||+.++++.++++|
T Consensus        60 i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P  138 (355)
T cd08230          60 VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVP  138 (355)
T ss_pred             eeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECC
Confidence            6899999999999999 9999999999998889999999999999999876543  222357999999999999999999


Q ss_pred             CCCChhhhhhhhhhHHHHHHHHh-------cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC---ChhHHHHHH
Q 022879           80 DNVSLEEGAMCEPLSVGVHACRR-------ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV---DDYRLSVAK  149 (290)
Q Consensus        80 ~~~~~~~aa~~~~~~ta~~~l~~-------~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~  149 (290)
                      ++++ ..++...++++++.++..       ...+++++|||+|+|++|++++|+|+.+|+ .++++++   +++|.++++
T Consensus       139 ~~~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~  216 (355)
T cd08230         139 PSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE  216 (355)
T ss_pred             CCCC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence            9999 555555566665554422       235789999999999999999999999999 5888876   688999999


Q ss_pred             HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Ccccc----chh
Q 022879          150 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP----LTP  223 (290)
Q Consensus       150 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~  223 (290)
                      ++|++. +++.  .+++.+ .    . ...++|++||++|.+..+..+++.++++|+++.+|....  ...++    ...
T Consensus       217 ~~Ga~~-v~~~--~~~~~~-~----~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~  287 (355)
T cd08230         217 ELGATY-VNSS--KTPVAE-V----K-LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRD  287 (355)
T ss_pred             HcCCEE-ecCC--ccchhh-h----h-hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhh
Confidence            999986 3432  233332 1    1 235799999999987788999999999999999996544  22333    345


Q ss_pred             hhccCcEEEEeeec-CCcHHHHHHHHHcCCC----CCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          224 AAVREVDVVGVFRY-KNTWPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       224 ~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++.+++++.|++.. .++++++++++.++.+    .+++.++++|++  +|+.+|++.+.++.  +|++|+|
T Consensus       288 ~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         288 LVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence            67899999998765 6689999999998872    246778899999  99999999887653  5999986

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.7e-40  Score=261.03  Aligned_cols=284  Identities=27%  Similarity=0.442  Sum_probs=244.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC-------------------CCC-
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPV-   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~-   60 (290)
                      .|+|||.+|+|+.+|.+|+.+++||+|+......|++|.+|..+..|+|..-.....                   ... 
T Consensus        63 ~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfm  142 (375)
T KOG0022|consen   63 VILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFM  142 (375)
T ss_pred             eEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEec
Confidence            379999999999999999999999999999999999999999999999985433221                   011 


Q ss_pred             -CcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879           61 -HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI  137 (290)
Q Consensus        61 -~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~  137 (290)
                       ..+|+||.+++...+.++++..+.+.++++ ....|+|.+.. .+.+++|+++.|.|.|++|+++++-|++.|+.++++
T Consensus       143 g~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIg  222 (375)
T KOG0022|consen  143 GTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIG  222 (375)
T ss_pred             ccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEE
Confidence             238999999999999999999999999998 48888998764 599999999999999999999999999999999999


Q ss_pred             EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC
Q 022879          138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE  216 (290)
Q Consensus       138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~  216 (290)
                      ++-+++|.+.+++||++..++..+......+.+.+++   +.++|+-|||+|..+.+.+++.+...+ |+-+.+|.....
T Consensus       223 vDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~  299 (375)
T KOG0022|consen  223 VDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG  299 (375)
T ss_pred             EecCHHHHHHHHhcCcceecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC
Confidence            9999999999999999999875433334666666664   578999999999999999999999888 999999987766


Q ss_pred             ccccchhh-hccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          217 MTVPLTPA-AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       217 ~~~~~~~~-~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ..++++++ +.+..++.|....    +.++..+++.+.++++++...+++.++|  +++++|++.|.+++.. |.|+.+
T Consensus       300 ~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  300 QEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             cccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence            66666664 3456666666433    7899999999999999999999999999  9999999999999655 877764

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=9e-39  Score=277.63  Aligned_cols=284  Identities=29%  Similarity=0.489  Sum_probs=236.3

Q ss_pred             ccccceeEEEEEeCCCCCC------CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC------CCCcccceeEe
Q 022879            2 VIGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV   69 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~   69 (290)
                      ++|||++|+|+++|+++++      |++||+|+..+..+|+.|.+|+.+++++|+...+++..      ...|+|+||+.
T Consensus        57 ~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~  136 (361)
T cd08231          57 ILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIY  136 (361)
T ss_pred             ccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEE
Confidence            6899999999999999986      99999999999999999999999999999987666542      24699999999


Q ss_pred             ecCC-ceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879           70 HPAD-LCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS  146 (290)
Q Consensus        70 v~~~-~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~  146 (290)
                      ++++ .++++|+++++.+++.+ .++.|||+++.. ...+++++|||+|+|++|++++++|+.+|++.++++++++++.+
T Consensus       137 v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         137 LPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             ecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            9996 79999999999888877 688999999976 44569999999988999999999999999966888889999999


Q ss_pred             HHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchh
Q 022879          147 VAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTP  223 (290)
Q Consensus       147 ~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~  223 (290)
                      +++.+|++.+++++.... ++...+.++  +.++++|++||++|+...+...+++++++|+++.+|.....  ..++...
T Consensus       217 ~~~~~g~~~vi~~~~~~~~~~~~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  294 (361)
T cd08231         217 LAREFGADATIDIDELPDPQRRAIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPER  294 (361)
T ss_pred             HHHHcCCCeEEcCcccccHHHHHHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHH
Confidence            999999988876543211 122344444  35678999999999767788999999999999999965422  2333344


Q ss_pred             hhccCcEEEEeeec-CCcHHHHHHHHHcC--CCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          224 AAVREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       224 ~~~~~~~i~~~~~~-~~~l~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++.+++++.+.+.. .++++++++++.++  .+.+.+.++++|++  +++++|++.+.+++ .+|+||++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~  361 (361)
T cd08231         295 IVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVIDP  361 (361)
T ss_pred             HhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeCC
Confidence            68889999888765 66899999999998  55567778888999  99999999998875 58999874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.3e-38  Score=275.57  Aligned_cols=275  Identities=20%  Similarity=0.295  Sum_probs=224.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPAD   73 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~   73 (290)
                      .++|||++|+|+++|+++++|++||+|++.+. ..|++|.+|..+++++|.+..+..      +...+|+|+||+.++..
T Consensus        65 ~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~  144 (357)
T PLN02514         65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQK  144 (357)
T ss_pred             ccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchH
Confidence            37899999999999999999999999986543 369999999999999998764321      11246999999999999


Q ss_pred             ceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHH
Q 022879           74 LCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVAKE  150 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~  150 (290)
                      .++++|+++++.+|+.+ ..+.|||+++.. ...+++++++|+|+|++|++++|+|+.+|++ +++++.++++. ..++.
T Consensus       145 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~  223 (357)
T PLN02514        145 FVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEH  223 (357)
T ss_pred             HeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHh
Confidence            99999999999999877 477889999866 4457999999998899999999999999995 66666666555 45567


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  230 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  230 (290)
                      +|++.+++...  .   ..+.+.    ..++|++||++|.+..+..++++++++|+++.+|.......++...++.++++
T Consensus       224 ~Ga~~~i~~~~--~---~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  294 (357)
T PLN02514        224 LGADDYLVSSD--A---AEMQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKV  294 (357)
T ss_pred             cCCcEEecCCC--h---HHHHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcE
Confidence            99987765321  1   233332    13699999999976788999999999999999997554445556667889999


Q ss_pred             EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+++.. ..+++++++++++|++  ++.+ +.|++  +|+.+|++.+.+++..+|+++++
T Consensus       295 i~g~~~~~~~~~~~~~~~~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        295 ITGSFIGSMKETEEMLEFCKEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             EEEEecCCHHHHHHHHHHHHhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence            9998766 4578999999999987  5555 56888  99999999999998889999874

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=9.8e-40  Score=253.48  Aligned_cols=251  Identities=28%  Similarity=0.377  Sum_probs=216.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++||.|.+|+|+++|++|+++++||||...                            +.+|.|+|+..+|...++++|+
T Consensus        66 ytpGmEaaGvVvAvG~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe  117 (336)
T KOG1197|consen   66 YTPGMEAAGVVVAVGEGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPE  117 (336)
T ss_pred             cCCCcccceEEEEecCCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCc
Confidence            589999999999999999999999999863                            4679999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      .+++.+||.+ ....|||..+.. ..+++|++||+|.+ |++|+++.|++++.|+ .++++.++.+|++.+++-|+++.+
T Consensus       118 ~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I  196 (336)
T KOG1197|consen  118 AITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPI  196 (336)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCccee
Confidence            9999999866 588899998876 78999999999965 9999999999999999 688888999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~  236 (290)
                      ++  +.+|+.+++.+++  +++|+|+++|.+|. +.+...+.+|++.|.++.+|..+. ..+++...+..+.+.+.-...
T Consensus       197 ~y--~~eD~v~~V~kiT--ngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl  271 (336)
T KOG1197|consen  197 DY--STEDYVDEVKKIT--NGKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSL  271 (336)
T ss_pred             ec--cchhHHHHHHhcc--CCCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhh
Confidence            85  4689999998884  78999999999997 789999999999999999997654 345566555555554443322


Q ss_pred             --c---CC----cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          237 --Y---KN----TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       237 --~---~~----~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                        +   +.    ...+++.++.+|.+  +..|.++|++  +++.+|+.+++++...||+++-
T Consensus       272 ~gYi~g~~el~~~v~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  272 LGYIDGEVELVSYVARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             hcccCCHHHHHHHHHHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence              1   22    33467777888988  6778999999  9999999999999999999985

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.9e-38  Score=272.21  Aligned_cols=280  Identities=28%  Similarity=0.496  Sum_probs=233.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|..+++++|..+.+++. ..+|+|+||+.++.++++++|++
T Consensus        56 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~  134 (339)
T PRK10083         56 VIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDA  134 (339)
T ss_pred             ccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCC
Confidence            68999999999999999999999999999999999999999999999998766543 34799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +++..++.+.++.++++++..++++++++|+|+|+|++|++++|+|+. +|++.++++++++++.++++++|++.++++.
T Consensus       135 ~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~  214 (339)
T PRK10083        135 IADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA  214 (339)
T ss_pred             CCHHHHhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence            999888766677888876667889999999999999999999999996 6998788899999999999999999888743


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCc
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  240 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (290)
                        ..++.+.+..    .+.++|++||++|.+..+..++++++++|+++.+|.......+....+..+.+++.+.....+.
T Consensus       215 --~~~~~~~~~~----~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
T PRK10083        215 --QEPLGEALEE----KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANK  288 (339)
T ss_pred             --cccHHHHHhc----CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhh
Confidence              3445444421    2345679999999767889999999999999999965433233333445677777777655678


Q ss_pred             HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEeC
Q 022879          241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  290 (290)
Q Consensus       241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~~  290 (290)
                      ++++++++++|.+++.+.+++.|++  +++++|++.+.++ ...+|+++++
T Consensus       289 ~~~~~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        289 FPVVIDWLSKGLIDPEKLITHTFDF--QHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             HHHHHHHHHcCCCChHHheeeeecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence            9999999999999655456778888  9999999998865 4568999875

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.7e-37  Score=267.87  Aligned_cols=282  Identities=57%  Similarity=0.996  Sum_probs=237.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++++|++||+|++.+..+|+.|++|..|+.++|++...++....+|+|++|+.++++.++++|++
T Consensus        57 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~  136 (343)
T cd05285          57 VLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDN  136 (343)
T ss_pred             ccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCC
Confidence            67999999999999999999999999999999999999999999999997655443345799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++.+++.++++.+|+++++.+.+++++++||+|+|++|++++|+|+.+|++.++++.+++++.++++++|++.+++++.
T Consensus       137 ~~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  216 (343)
T cd05285         137 VSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT  216 (343)
T ss_pred             CCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence            99999987777888998887789999999999988999999999999999965888888899999999999998887542


Q ss_pred             Cccc---HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecC
Q 022879          162 NLQD---IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK  238 (290)
Q Consensus       162 ~~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (290)
                        .+   +.+.+.++  ..++++|++|||+|+...+...+++++++|+++.+|.......++.....++.+++.+.....
T Consensus       217 --~~~~~~~~~~~~~--~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (343)
T cd05285         217 --EDTPESAEKIAEL--LGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA  292 (343)
T ss_pred             --ccchhHHHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh
Confidence              33   25556554  245679999999998658899999999999999998654333444456677888888876666


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC-CceeEEEe
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN  289 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~  289 (290)
                      +.+++++++++++.+.+.+.+.+.+++  +++.+|++.+.+++ ..+|++|.
T Consensus       293 ~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         293 NTYPTAIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             HHHHHHHHHHHcCCCCchHhEEEEEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence            788999999999987554556778888  99999999998874 56899873

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.1e-38  Score=274.40  Aligned_cols=268  Identities=23%  Similarity=0.347  Sum_probs=213.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|.+  +|++||||++.+..+|+ |..|  +..++|+...+.+. ..+|+|+||+.+++++++++|+
T Consensus        60 ~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~  133 (341)
T cd08237          60 MALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPD  133 (341)
T ss_pred             eeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCC
Confidence            37899999999998865  79999999998877766 4445  56788987766543 3579999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHh---cCCCCCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           81 NVSLEEGAMCEPLSVGVHACRR---ANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~---~~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      ++++++|+.+++++++++++..   ..+++|++|||.|+|++|++++|+++. +|...+++++.+++|++++++.+....
T Consensus       134 ~l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~  213 (341)
T cd08237         134 NVDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL  213 (341)
T ss_pred             CCChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee
Confidence            9999999888889999998853   456889999999999999999999996 665578889999999999987665422


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEE
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  233 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  233 (290)
                      ++      +       +.  ...++|++||++|+   +..+..+++.++++|+++.+|.......++...++.+++++.+
T Consensus       214 ~~------~-------~~--~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g  278 (341)
T cd08237         214 ID------D-------IP--EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVG  278 (341)
T ss_pred             hh------h-------hh--hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEE
Confidence            11      1       11  12369999999994   4578999999999999999997544445566667889999999


Q ss_pred             eeec-CCcHHHHHHHHHcC---CCCCCCceeeEeeCC-hhhHHHHHHHHhcCCCceeEEEeC
Q 022879          234 VFRY-KNTWPLCLELLRSG---KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       234 ~~~~-~~~l~~~~~~~~~g---~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +... ..+++++++++++|   ..++.+.+++.|+++ ++++.++++...++ ..||+||++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         279 SSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             ecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence            8765 56799999999999   334578888888872 34666666666554 678999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.5e-37  Score=264.90  Aligned_cols=281  Identities=30%  Similarity=0.581  Sum_probs=234.8

Q ss_pred             ccccceeEEEEEeCCCCC--CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC-CCCcccceeEeecCC-ceEE
Q 022879            2 VIGHECAGVIEKVGSEVK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-PVHGSLANQVVHPAD-LCFK   77 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~e~~~v~~~-~~~~   77 (290)
                      ++|+|++|+|+++|++++  +|++||+|+..+..+|+.|.+|..+..+.|+....++.. ...|+|+||+.++++ .+++
T Consensus        65 ~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~  144 (350)
T cd08256          65 IPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHK  144 (350)
T ss_pred             ccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEE
Confidence            679999999999999999  999999999999999999999999999999876544331 246999999999988 5789


Q ss_pred             CCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           78 LPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        78 ~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      +|+++++.+++.+.++.++|++++.++++++++|+|.|+|++|++++++|+++|+..++++++++++.++++++|++.++
T Consensus       145 lP~~~~~~~aa~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~  224 (350)
T cd08256         145 VPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL  224 (350)
T ss_pred             CCCCCCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence            99999999888777888999998668899999999977799999999999999997788899999999999999998877


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhh-hccCcEEEEeee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFR  236 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~  236 (290)
                      ++  ...++.+.+.++.  .+.++|++||++|.+..+..++++++++|+++.+|.......++...+ ..+++++.+...
T Consensus       225 ~~--~~~~~~~~~~~~~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~  300 (350)
T cd08256         225 NP--PEVDVVEKIKELT--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHL  300 (350)
T ss_pred             cC--CCcCHHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEecc
Confidence            63  3456666666542  456799999999975678899999999999999986443333333333 356677777765


Q ss_pred             cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       237 ~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ....++++++++++|.+++.+.+.+.|++  +++.+|++.+++++..+|+++
T Consensus       301 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         301 GPYCYPIAIDLIASGRLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CchhHHHHHHHHHcCCCChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence            56678999999999999654446778888  999999999999888889875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.7e-37  Score=264.91  Aligned_cols=283  Identities=29%  Similarity=0.409  Sum_probs=231.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc--ccCCCCCcccceeEeecCC--ceEE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF--FATPPVHGSLANQVVHPAD--LCFK   77 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~e~~~v~~~--~~~~   77 (290)
                      ++|||++|+|+++|++++++++||+|+..+..+|++|..|..++.++|.....  ......+|+|+||+.++.+  .+++
T Consensus        56 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~  135 (351)
T cd08285          56 ILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAP  135 (351)
T ss_pred             ccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEE
Confidence            68999999999999999999999999998878999999999999999987531  1112347999999999974  8999


Q ss_pred             CCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           78 LPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        78 ~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +|+++++.+++.+ ..+.|++++++.+.++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+
T Consensus       136 lP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~  215 (351)
T cd08285         136 LPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI  215 (351)
T ss_pred             CCCCCCHHHhhhhccchhhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceE
Confidence            9999999999877 578889999877889999999999889999999999999999778999999999999999999888


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc--cccchh--hhccCcEEE
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVV  232 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~~~~~i~  232 (290)
                      +++.  ..++.+.+.++.  .+.++|++||++|++..+..++++++++|+++.+|......  .++...  ...+..++.
T Consensus       216 v~~~--~~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~  291 (351)
T cd08285         216 VDYK--NGDVVEQILKLT--GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTIN  291 (351)
T ss_pred             ecCC--CCCHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEE
Confidence            8743  356666665543  45679999999998778899999999999999998654322  222111  234555666


Q ss_pred             Eeeec--CCcHHHHHHHHHcCCCCCCC-ceeeEeeCChhhHHHHHHHHhcCC-CceeEEEeC
Q 022879          233 GVFRY--KNTWPLCLELLRSGKIDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~--~~~l~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~~  290 (290)
                      +....  .+.++++++++++|++++.. .+.+.+++  +++++|++.+.+++ ...|++|.+
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         292 GGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             EeecCCccccHHHHHHHHHcCCCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence            55432  57899999999999996633 34445777  99999999999886 478999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.5e-37  Score=262.71  Aligned_cols=274  Identities=24%  Similarity=0.389  Sum_probs=233.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|..|+.+.|.+....+. ..+|+|+||+.++++.++++|+
T Consensus        57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~  135 (333)
T cd08296          57 VPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPD  135 (333)
T ss_pred             ccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCC
Confidence            689999999999999999999999998754 45799999999999999998876543 3479999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      ++++.+++.+ ..+.++|++++...++++++|||+|+|++|++++++|+.+|+ .++++++++++.++++++|+++++++
T Consensus       136 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~  214 (333)
T cd08296         136 DLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDT  214 (333)
T ss_pred             CCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecC
Confidence            9999988866 477889998877788999999999999999999999999999 58888899999999999999888764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                      .  ..++.+.++++     .++|++||++|.+..+...+++++++|+++.+|......+++...++.+++++.+.... .
T Consensus       215 ~--~~~~~~~~~~~-----~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~  287 (333)
T cd08296         215 S--KEDVAEALQEL-----GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTA  287 (333)
T ss_pred             C--CccHHHHHHhc-----CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCH
Confidence            3  34565555543     36999999997667889999999999999999976544455555667899999998754 5


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .+++.++++++++.+  .+.+ +.|++  +++.+|++.+.+++.+||+|++
T Consensus       288 ~~~~~~~~~~~~~~l--~~~v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         288 LDSEDTLKFSALHGV--RPMV-ETFPL--EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHHhCCC--CceE-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence            678889999988887  4444 57888  9999999999999889999885

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.4e-36  Score=261.77  Aligned_cols=280  Identities=39%  Similarity=0.674  Sum_probs=232.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----CCCcccceeEeecCCceEE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFK   77 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~   77 (290)
                      ++|+|++|+|+++|+++++|++||+|++.+..+|++|.+|..|+.+.|+.+..++..    ..+|+|+||+.++++++++
T Consensus        56 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~  135 (339)
T cd08232          56 VLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVP  135 (339)
T ss_pred             ecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEE
Confidence            679999999999999999999999999999999999999999999999987655421    2579999999999999999


Q ss_pred             CCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           78 LPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        78 ~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      +|+++++.+|+.+.+++++|+++......++++|||.|+|.+|++++|+|+.+|++.++++++++++.+++++++.+.++
T Consensus       136 iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi  215 (339)
T cd08232         136 LPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETV  215 (339)
T ss_pred             CcCCCCHHHhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEE
Confidence            99999999998766888899988764333899999998899999999999999996688888889988899999998887


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +++.  .+    +.++. ....++|++||+.|+...+...+++|+++|+++.+|........+...++.+.+++.+....
T Consensus       216 ~~~~--~~----~~~~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
T cd08232         216 NLAR--DP----LAAYA-ADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF  288 (339)
T ss_pred             cCCc--hh----hhhhh-ccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC
Confidence            7532  22    22221 13356999999999766788999999999999999854432233334456677888777666


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+.++.++++++++.+++.+.+.+.+++  +++++|++.+.+++..+|+|+++
T Consensus       289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         289 DDEFAEAVRLLAAGRIDVRPLITAVFPL--EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHHcCCCCchhheeEEecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence            6678999999999998666667778888  99999999998888899999875

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.7e-36  Score=263.38  Aligned_cols=281  Identities=28%  Similarity=0.477  Sum_probs=231.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCC--------------------CC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VH   61 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~   61 (290)
                      ++|||++|+|+++|++++++++||+|++.+...|++|.+|+.+++++|+....++..+                    ..
T Consensus        56 i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  135 (365)
T cd05279          56 ILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGT  135 (365)
T ss_pred             ccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCcccccccc
Confidence            7899999999999999999999999999988899999999999999998765442111                    24


Q ss_pred             cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      |+|++|+.++++.++++|+++++.+++.++ .+.++|+++.. +.++++++|||+|+|++|++++++|+.+|++.+++++
T Consensus       136 g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~  215 (365)
T cd05279         136 STFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVD  215 (365)
T ss_pred             ccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence            799999999999999999999999998775 78899988754 7899999999998899999999999999997788888


Q ss_pred             CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhc-cCCEEEEeccCC--CC
Q 022879          140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-AGGKVCLVGMGH--HE  216 (290)
Q Consensus       140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~  216 (290)
                      +++++.++++++|++.+++....+.++.+.++++.   ++++|++||++|....+..++++++ ++|+++.+|...  ..
T Consensus       216 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~  292 (365)
T cd05279         216 INKDKFEKAKQLGATECINPRDQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTE  292 (365)
T ss_pred             CCHHHHHHHHHhCCCeecccccccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCc
Confidence            89999999999999888764432225656666553   4689999999987678889999999 999999998643  23


Q ss_pred             ccccchhhhccCcEEEEeee----cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          217 MTVPLTPAAVREVDVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       217 ~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ..++...+ .+..++.|.+.    ..+.+.+++++++++.+++.+...+.+++  +++.+|++.+.+++. .|++++
T Consensus       293 ~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~  365 (365)
T cd05279         293 ATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT  365 (365)
T ss_pred             eeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence            34444445 56777777643    25778999999999998765567788888  999999999887644 577663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.3e-36  Score=266.79  Aligned_cols=280  Identities=22%  Similarity=0.254  Sum_probs=234.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++++.+++||+|++.+..+|+.|..|..+.+++|+....+|....+|+|++|+.+++.+++++|++
T Consensus        84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~  163 (393)
T cd08246          84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH  163 (393)
T ss_pred             ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCC
Confidence            67999999999999999999999999999999999999999999999998888887667899999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++.+++.+ ..+.|||+++..   ++++++++|+|+|+ |++|++++++++.+|++ ++++++++++.++++++|++.+
T Consensus       164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~  242 (393)
T cd08246         164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGV  242 (393)
T ss_pred             CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEE
Confidence            999998866 588899999853   57899999999997 99999999999999995 6677889999999999999888


Q ss_pred             EecCCCc--------------------ccHHHHHHHHHHHhCC-CccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879          157 VKVSTNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       157 ~~~~~~~--------------------~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      ++++..+                    ..+.+.+.+++  ++. ++|++||++|. ..+..++++++++|+++.+|....
T Consensus       243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  319 (393)
T cd08246         243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTG  319 (393)
T ss_pred             EcccccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCC
Confidence            8753211                    12344444442  445 79999999996 678899999999999999985432


Q ss_pred             -CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEe
Q 022879          216 -EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  289 (290)
Q Consensus       216 -~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~  289 (290)
                       ...++...+..++.++.+.+.. .+.+++++++++++.+.  +.+++.|++  +++++|++.+.++ +..+|+++-
T Consensus       320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRID--PCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCce--eeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence             2234455566778888887655 45788999999999884  446778888  9999999999988 788898863

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=3e-37  Score=261.96  Aligned_cols=248  Identities=21%  Similarity=0.307  Sum_probs=200.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++ +|++||||++.    +..|..|..               +..|+|+||+.++++.++++|+
T Consensus        60 ~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~  119 (308)
T TIGR01202        60 LVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVR---------------GLFGGASKRLVTPASRVCRLDP  119 (308)
T ss_pred             ccCcceeEEEEEEecCCC-CCCCCCEEEEe----Ccccccccc---------------ccCCcccceEEcCHHHceeCCC
Confidence            479999999999999998 59999999873    222332211               1359999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +++++. +.+++.+|||+++... ..+++++||+|+|++|++++|+|+.+|++.+++++.++++++.+..+   .++++.
T Consensus       120 ~~~~~~-a~~~~~~~a~~~~~~~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~  194 (308)
T TIGR01202       120 ALGPQG-ALLALAATARHAVAGA-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPE  194 (308)
T ss_pred             CCCHHH-HhhhHHHHHHHHHHhc-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChh
Confidence            999754 5556678999998764 34688999999999999999999999997777788888777766543   233311


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CC
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  239 (290)
                         ++           .+.++|++|||+|.+..+..+++.++++|+++.+|.......++...++.+++++.+...+ .+
T Consensus       195 ---~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (308)
T TIGR01202       195 ---KD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPG  260 (308)
T ss_pred             ---hc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchh
Confidence               00           2457999999999877889999999999999999976544456666778888999887765 57


Q ss_pred             cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       240 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      +++++++++++|++++.+.+++.|+|  +|+++|++.+.++...+|++|+
T Consensus       261 ~~~~~~~l~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       261 DLHAVRELIESGALSLDGLITHQRPA--SDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHHHHHHHcCCCChhhccceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence            79999999999999888889999998  9999999998777677899874

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.2e-36  Score=267.83  Aligned_cols=271  Identities=24%  Similarity=0.364  Sum_probs=217.5

Q ss_pred             ccccceeEEEEEeCCCCC-CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC----ceE
Q 022879            2 VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCF   76 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~----~~~   76 (290)
                      ++|||++|+|+++|++++ +|++||||++.+...|+.|..|..           ++ ...+|+|+||+.++++    .++
T Consensus        65 i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g-~~~~G~~aey~~v~~~~~~~~~~  132 (410)
T cd08238          65 ILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG-----------YS-YTYPGGLATYHIIPNEVMEQDCL  132 (410)
T ss_pred             eeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC-----------cc-ccCCCcceEEEEecHHhccCCeE
Confidence            789999999999999998 699999999988888888877621           11 1347999999999987    689


Q ss_pred             ECCCCCChhhhhhhhhhHHH---HHHH---------HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCC--CCeEEEEeCC
Q 022879           77 KLPDNVSLEEGAMCEPLSVG---VHAC---------RRANIGPETNVLIMGA-GPIGLVTMLAARAFG--APRIVIVDVD  141 (290)
Q Consensus        77 ~~P~~~~~~~aa~~~~~~ta---~~~l---------~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g--~~~vv~v~~~  141 (290)
                      ++|+++++.+|+.+.+++++   +.++         +.+++++|++|+|+|+ |++|++++|+|+++|  +..+++++.+
T Consensus       133 ~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~  212 (410)
T cd08238         133 LIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVN  212 (410)
T ss_pred             ECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCC
Confidence            99999999999876444333   3322         2367889999999975 999999999999985  4468999999


Q ss_pred             hhHHHHHHHc--------CCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          142 DYRLSVAKEI--------GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       142 ~~~~~~~~~l--------g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ++|.++++++        |++ .++++. ..+++.+.+++++  .+.++|++||++|.+..+..++++++++|+++.++.
T Consensus       213 ~~r~~~a~~~~~~~~~~~Ga~~~~i~~~-~~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g  289 (410)
T cd08238         213 DERLARAQRLFPPEAASRGIELLYVNPA-TIDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAG  289 (410)
T ss_pred             HHHHHHHHHhccccccccCceEEEECCC-ccccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEc
Confidence            9999999997        655 344432 1245666666653  466899999999987889999999999998887753


Q ss_pred             C-CC--CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          213 G-HH--EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       213 ~-~~--~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      . ..  ...++...++.+++++.|++.. ..+++++++++++|++++.+.+++.|++  +++++|++.+. ++..||+||
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl  366 (410)
T cd08238         290 PVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLI  366 (410)
T ss_pred             cCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEE
Confidence            2 21  2355666788899999998765 5689999999999999888889999999  99999999998 667899998


Q ss_pred             eC
Q 022879          289 NL  290 (290)
Q Consensus       289 ~~  290 (290)
                      .+
T Consensus       367 ~~  368 (410)
T cd08238         367 YT  368 (410)
T ss_pred             EC
Confidence            64

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3e-36  Score=259.87  Aligned_cols=276  Identities=28%  Similarity=0.489  Sum_probs=234.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++.+|++||+|+..++.+|+.|..|..|..++|+...+.+. +.+|+|++|+.+++++++++|++
T Consensus        60 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          60 TLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             ecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCC
Confidence            67999999999999999999999999999999999999999999999999988876 67899999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~--~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      +++++++.++ .+.|||+++..  ..+.++++|||+|+|++|++++++|+.+| . .++++.+++++.+.++++|.++++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~  217 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL  217 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence            9999998774 78899999865  36889999999999779999999999999 6 577888889999999999998887


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +++  .. +.+.++++.  .+.++|+++|++|........+++++++|+++.+|.... ..++....+.+++++.+....
T Consensus       218 ~~~--~~-~~~~i~~~~--~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  291 (340)
T cd05284         218 NAS--DD-VVEEVRELT--GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWG  291 (340)
T ss_pred             cCC--cc-HHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecc
Confidence            743  23 666666542  446799999999976788899999999999999986543 233334445688888876543


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       ...++.+++++++|.+.+  . .+.|++  +++++|++.+.+++..+|+++.+
T Consensus       292 ~~~~~~~~~~~l~~g~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         292 TRAELVEVVALAESGKVKV--E-ITKFPL--EDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             cHHHHHHHHHHHHhCCCCc--c-eEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence             667899999999998843  3 356788  99999999999988889999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=3.6e-36  Score=263.08  Aligned_cols=283  Identities=30%  Similarity=0.484  Sum_probs=232.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcccc------------C-------CCCCc
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA------------T-------PPVHG   62 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-------~~~~g   62 (290)
                      ++|||++|+|+++|++++++++||+|++.+..+|++|++|..+.+++|+.+....            .       ...+|
T Consensus        57 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  136 (386)
T cd08283          57 ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAG  136 (386)
T ss_pred             cccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCC
Confidence            6899999999999999999999999999988899999999999999999754321            0       12369


Q ss_pred             ccceeEeecCC--ceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           63 SLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        63 ~~~e~~~v~~~--~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      +|+||++++++  .++++|+++++.+|+.+ ..+.+||+++..++++++++|||+|+|.+|++++++|+..|...+++++
T Consensus       137 ~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~  216 (386)
T cd08283         137 GQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAID  216 (386)
T ss_pred             eeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence            99999999988  89999999999999977 4788999999668899999999998899999999999999986689999


Q ss_pred             CChhHHHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCC---------------------HHHHHHH
Q 022879          140 VDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGL---------------------NKTMSTA  197 (290)
Q Consensus       140 ~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~  197 (290)
                      .++++.+++++++...++++.  .. ++.+.++++.  .+.++|++||++|+                     ...+..+
T Consensus       217 ~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (386)
T cd08283         217 RVPERLEMARSHLGAETINFE--EVDDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA  292 (386)
T ss_pred             CCHHHHHHHHHcCCcEEEcCC--cchHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHH
Confidence            999999999998544565533  23 3666666552  45579999999975                     2367889


Q ss_pred             HHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHH
Q 022879          198 LGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE  275 (290)
Q Consensus       198 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~  275 (290)
                      +++++++|+++.+|.... ...++...++.+++++.+.... .+.++.++++++++.+.+.+.+.+.+++  +++++|++
T Consensus       293 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~  370 (386)
T cd08283         293 IQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYK  370 (386)
T ss_pred             HHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHH
Confidence            999999999999986543 2233444566788888887554 5678999999999998655556677888  99999999


Q ss_pred             HHhcCC-CceeEEEeC
Q 022879          276 TSARGG-TAIKVMFNL  290 (290)
Q Consensus       276 ~~~~~~-~~gk~vl~~  290 (290)
                      .+.+++ ..+|++|+.
T Consensus       371 ~~~~~~~~~~k~~~~~  386 (386)
T cd08283         371 IFDKKEDGCIKVVLKP  386 (386)
T ss_pred             HHHhCCCCeEEEEecC
Confidence            988875 568999864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=7.2e-36  Score=259.91  Aligned_cols=283  Identities=26%  Similarity=0.431  Sum_probs=227.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcccc--------------------CCCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------------------TPPVH   61 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~   61 (290)
                      ++|||++|+|+++|++++.+++||+|++.+..+|++|.+|..++++.|+.....+                    .....
T Consensus        63 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (373)
T cd08299          63 ILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGT  142 (373)
T ss_pred             cccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCC
Confidence            7899999999999999999999999999888999999999999999998653211                    01135


Q ss_pred             cccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      |+|+||+.+++++++++|+++++.+++.++ .+.++|+++. .+.++++++|||+|+|++|++++++++.+|++.+++++
T Consensus       143 G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~  222 (373)
T cd08299         143 STFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVD  222 (373)
T ss_pred             CcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence            899999999999999999999999999775 8889998864 47899999999998899999999999999996688888


Q ss_pred             CChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHh-ccCCEEEEeccCCCCcc
Q 022879          140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMT  218 (290)
Q Consensus       140 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~  218 (290)
                      +++++.+.++++|++.+++.....+++...+.++.   ++++|+++|++|.+..+..++..+ +++|+++.+|.......
T Consensus       223 ~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~  299 (373)
T cd08299         223 INKDKFAKAKELGATECINPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQN  299 (373)
T ss_pred             CCHHHHHHHHHcCCceEecccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCce
Confidence            99999999999999888875432334556666553   257999999999767777766655 57899999996543223


Q ss_pred             ccchh-hhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          219 VPLTP-AAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       219 ~~~~~-~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++... .+.++.++.+.+..    ...+.++++.+.++.+++.+.+++.|++  +++.+|++.+.+++ ..|+++++
T Consensus       300 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~-~~k~~~~~  373 (373)
T cd08299         300 LSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGK-SIRTVLTF  373 (373)
T ss_pred             eecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCC-cceEEEeC
Confidence            33333 23456777776543    2567778888888877666677888888  99999999988764 45888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=7.8e-36  Score=257.30  Aligned_cols=280  Identities=32%  Similarity=0.595  Sum_probs=231.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|++++++++||+|++.+..+|+.|..|..+++|+|+...+.+ .+.+|+|++|+.++.++++++|+
T Consensus        59 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~  137 (341)
T PRK05396         59 MVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPD  137 (341)
T ss_pred             cccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcC
Confidence            36899999999999999999999999999999999999999999999999865444 34679999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++.+++.+.++.++++++.. ...++++|+|+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++
T Consensus       138 ~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~  216 (341)
T PRK05396        138 DIPDDLAAIFDPFGNAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA  216 (341)
T ss_pred             CCCHHHhHhhhHHHHHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence            9999988866676777665533 346899999998899999999999999996678888899999999999999887643


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec--C
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--K  238 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~  238 (290)
                        ..++.+.++++.  .++++|++|||.|....+..++++++++|+++.+|.......++...+.++++++.+....  .
T Consensus       217 --~~~~~~~~~~~~--~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  292 (341)
T PRK05396        217 --KEDLRDVMAELG--MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMF  292 (341)
T ss_pred             --cccHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCcc
Confidence              345666666552  4578999999999877889999999999999999865544444455677788888776532  3


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+..++++++++ +++.+.+.+.+++  +++++|++.+.+++ .+|++++|
T Consensus       293 ~~~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        293 ETWYKMSALLQSG-LDLSPIITHRFPI--DDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             chHHHHHHHHHcC-CChhHheEEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence            4566788999998 4445557778888  99999999998876 79999875

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-35  Score=260.16  Aligned_cols=281  Identities=30%  Similarity=0.513  Sum_probs=231.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|++.+..+|+.|++|..+++++|..+...|. ..+|+|++|+.++++.++++|++
T Consensus        90 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~  168 (384)
T cd08265          90 VIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINEL  168 (384)
T ss_pred             ccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCcc
Confidence            57999999999999999999999999999999999999999999999998776554 34799999999999999999986


Q ss_pred             -------CChhhhhhhhhhHHHHHHHH-h-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 022879           82 -------VSLEEGAMCEPLSVGVHACR-R-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  152 (290)
Q Consensus        82 -------~~~~~aa~~~~~~ta~~~l~-~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg  152 (290)
                             ++...|+.+.++++||+++. . .+++++++|||+|+|++|++++++|+.+|+..++++++++++.++++++|
T Consensus       169 ~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g  248 (384)
T cd08265         169 REIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMG  248 (384)
T ss_pred             ccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC
Confidence                   45565555578889999984 3 68899999999988999999999999999966888888889999999999


Q ss_pred             CCEEEecCCC-cccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879          153 ADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  230 (290)
Q Consensus       153 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  230 (290)
                      +++++++... ..++.+.+.++.  .+.++|+++|++|.+ ..+..++++|+++|+++.+|.......++...+..+..+
T Consensus       249 ~~~~v~~~~~~~~~~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  326 (384)
T cd08265         249 ADYVFNPTKMRDCLSGEKVMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQ  326 (384)
T ss_pred             CCEEEcccccccccHHHHHHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceE
Confidence            9888775432 225666666653  456899999999963 467889999999999999986543333344456667778


Q ss_pred             EEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          231 VVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       231 i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      +.+....  ...+++++++++++.+.+...+++.|++  +++++|++.+.++ ..+|+|+
T Consensus       327 l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         327 IVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             EEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence            8877653  5579999999999998654456778888  9999999997665 6788875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.7e-35  Score=255.68  Aligned_cols=283  Identities=33%  Similarity=0.575  Sum_probs=234.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC--ceEECC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLP   79 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P   79 (290)
                      ++|||++|+|+++|++++++++||+|++.+...|++|.+|..+..+.|....+..+...+|+|++|+.++++  .++++|
T Consensus        57 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp  136 (345)
T cd08286          57 ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLP  136 (345)
T ss_pred             eecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECC
Confidence            679999999999999999999999999999899999999999999999876554333457999999999987  899999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           80 DNVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++..+++.+ ..+++||.++ ...++++++++||+|+|++|++++|+++.+|...++++++++++.++++++|++.++
T Consensus       137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v  216 (345)
T cd08286         137 EGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTV  216 (345)
T ss_pred             CCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCcee
Confidence            99999998877 5778899865 347889999999998899999999999999944688898999999999999998888


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      ++.  ..++...+.++.  .+.++|++||++|....+..+++.++++|+++.+|.......++...++.+++++.+....
T Consensus       217 ~~~--~~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (345)
T cd08286         217 NSA--KGDAIEQVLELT--DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD  292 (345)
T ss_pred             ccc--cccHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc
Confidence            743  345666666553  4567999999999877888999999999999999965444445555556788888775444


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC--CceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~gk~vl~~  290 (290)
                      ...++.++++++++.+.+.+.+++++++  ++++++++.+.+..  ...|++|++
T Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 TNTTPMLLKLVSSGKLDPSKLVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hhhHHHHHHHHHcCCCChHHcEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence            4678889999999998665556788888  99999999988753  456999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=8.5e-36  Score=261.83  Aligned_cols=281  Identities=21%  Similarity=0.248  Sum_probs=232.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++++++++||+|++.+..+|++|++|..+++++|+.+...+....+|+|+||+.+++++++++|++
T Consensus        80 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~  159 (398)
T TIGR01751        80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKH  159 (398)
T ss_pred             ecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCC
Confidence            68999999999999999999999999999999999999999999999998766665556899999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++.+++.+ ..+.+||+++..   ++++++++++|+|+ |++|++++++++++|++ +++++.++++.+.++++|++.+
T Consensus       160 l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~  238 (398)
T TIGR01751       160 LTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAV  238 (398)
T ss_pred             CCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEE
Confidence            999999866 488889998753   67889999999998 99999999999999995 6667788889999999999988


Q ss_pred             EecCCCc--------------------ccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-
Q 022879          157 VKVSTNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-  215 (290)
Q Consensus       157 ~~~~~~~--------------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-  215 (290)
                      ++++..+                    ..+...+.++  +.++++|++|||+|. ..+...+++++++|+++.+|.... 
T Consensus       239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  315 (398)
T TIGR01751       239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGY  315 (398)
T ss_pred             ecCCCcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCC
Confidence            8753210                    1123333333  245689999999996 678899999999999999986543 


Q ss_pred             CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          216 EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       216 ~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...++...++.++.++.+.... .+.+++++++++++.+.  +.+++++++  ++++++++.+.+++..+|+|+++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       316 NHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRID--PTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             CCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcc--cceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            2344455566677777776544 34578899999999884  446778888  99999999999988889999864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.4e-35  Score=255.59  Aligned_cols=280  Identities=34%  Similarity=0.623  Sum_probs=232.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++++|++||+|+..++..|+.|++|..++.++|++.++++. ...|+|++|+.++++.++++|++
T Consensus        58 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~  136 (340)
T TIGR00692        58 VVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKS  136 (340)
T ss_pred             ccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCC
Confidence            68999999999999999999999999999999999999999999999999876643 35799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++..++.+.++.++++++ .....++++++|+|+|++|++++|+++.+|.+.++++++++++.++++++|++.++++  
T Consensus       137 ~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~--  213 (340)
T TIGR00692       137 IPPEYATIQEPLGNAVHTV-LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNP--  213 (340)
T ss_pred             CChHhhhhcchHHHHHHHH-HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcc--
Confidence            9987776666788888876 3456789999998889999999999999999657888888999999999998877764  


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch-hhhccCcEEEEeeec--C
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--K  238 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~  238 (290)
                      ...++.+.+.++.  .++++|++||++|....+...+++|+++|+++.+|.......++.. .+.++.+++.+....  .
T Consensus       214 ~~~~~~~~l~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (340)
T TIGR00692       214 FKEDVVKEVADLT--DGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMF  291 (340)
T ss_pred             cccCHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCch
Confidence            3356666666542  4568999999999767888999999999999999865332233333 456677777776532  4


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+.+++++++++.+++.+.+.+.+++  +++.++++.+.+++ .+|+|++|
T Consensus       292 ~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       292 ETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             hhHHHHHHHHHcCCCChHHheeeeeeH--HHHHHHHHHHhcCC-CceEEEeC
Confidence            567889999999999654556777888  99999999998876 49999986

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2.3e-35  Score=254.77  Aligned_cols=280  Identities=31%  Similarity=0.506  Sum_probs=231.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcccc---CCCCCcccceeEeecCC--ceE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCF   76 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~e~~~v~~~--~~~   76 (290)
                      ++|+|++|+|+++|++++++++||+|++.+..+|+.|.+|+.++.+.|++...+|   ....+|+|++|+.++++  .++
T Consensus        56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~  135 (344)
T cd08284          56 VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLL  135 (344)
T ss_pred             ccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceE
Confidence            5799999999999999999999999999998999999999999999998765542   22346999999999975  999


Q ss_pred             ECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           77 KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        77 ~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      ++|+++++.+++.+ ..+.|||+++....+.++++|||+|+|.+|++++++|+.+|+..++++++++++.++++++|+. 
T Consensus       136 ~~p~~l~~~~a~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-  214 (344)
T cd08284         136 KLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-  214 (344)
T ss_pred             ECCCCCCHHHhhhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-
Confidence            99999999999876 5889999999777888999999998899999999999999975688888889999999999975 


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~  234 (290)
                      .++  ....++...+.++.  .++++|++||++|.+..+...+++++++|+++.+|... ..........+.+++++.+.
T Consensus       215 ~~~--~~~~~~~~~l~~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
T cd08284         215 PIN--FEDAEPVERVREAT--EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFG  290 (344)
T ss_pred             EEe--cCCcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEe
Confidence            344  33356666666653  45689999999997678899999999999999999654 22233334456677777654


Q ss_pred             eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ... .+.+++++++++++.+.+.+.+.+.+++  ++++++++.+.+++. +|+|++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         291 RCPVRSLFPELLPLLESGRLDLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             cCCcchhHHHHHHHHHcCCCChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence            333 6789999999999998654456677888  999999999888766 999986

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.8e-35  Score=254.06  Aligned_cols=280  Identities=38%  Similarity=0.662  Sum_probs=236.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc-----eE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CF   76 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~-----~~   76 (290)
                      ++|+|++|+|+++|++++.|++||+|++.++.+|+.|++|..+..++|+...+++. ...|+|++|+.+++.+     ++
T Consensus        56 ~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~  134 (343)
T cd08235          56 ILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVL  134 (343)
T ss_pred             ccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEE
Confidence            67999999999999999999999999999999999999999999999998877654 4679999999999999     99


Q ss_pred             ECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           77 KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        77 ~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      ++|+++++.+|+.+.++.+|+++++...++++++|||+|+|.+|++++++|+..|.+.++++++++++.+.++.++.+.+
T Consensus       135 ~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~  214 (343)
T cd08235         135 KLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYT  214 (343)
T ss_pred             ECCCCCCHHHHHhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEE
Confidence            99999999999877778889999876789999999999889999999999999999648888889999898889998887


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhhccCcEEEEe
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~  234 (290)
                      ++++  +.++.+.+++..  .+.++|++||+++....+...+++++++|+++.++.....  ..+......++.+++.+.
T Consensus       215 ~~~~--~~~~~~~i~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (343)
T cd08235         215 IDAA--EEDLVEKVRELT--DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS  290 (343)
T ss_pred             ecCC--ccCHHHHHHHHh--CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEE
Confidence            7643  456666666543  4567999999999766888999999999999999854322  233345566788888776


Q ss_pred             eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ... .+.++.++++++++.+.+.+.+...+++  +++.++++.+.+++ .+|+|++
T Consensus       291 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         291 YAASPEDYKEALELIASGKIDVKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             ecCChhhHHHHHHHHHcCCCChHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence            655 5678899999999988644446677888  99999999999988 8899874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.9e-35  Score=256.89  Aligned_cols=278  Identities=31%  Similarity=0.488  Sum_probs=227.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC----------------------CC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PP   59 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~   59 (290)
                      ++|+|++|+|+++|+++++|++||+|++.+. .|++|.+|+.++.++|.+...+..                      ..
T Consensus        58 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (365)
T cd08278          58 VLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFF  136 (365)
T ss_pred             ccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccc
Confidence            6899999999999999999999999999765 899999999999999986543210                      11


Q ss_pred             CCcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879           60 VHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI  137 (290)
Q Consensus        60 ~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~  137 (290)
                      ..|+|++|+.+++.+++++|+++++.+++.+ ..+.+|+.++. ...++++++|||+|+|++|++++|+|+++|++.+++
T Consensus       137 ~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~  216 (365)
T cd08278         137 GQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIA  216 (365)
T ss_pred             cccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence            2589999999999999999999999988877 47888888874 477899999999988999999999999999977999


Q ss_pred             EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--C
Q 022879          138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--H  215 (290)
Q Consensus       138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~  215 (290)
                      +++++++.++++++|++.++++  ...++.+.+.+..   +.++|+++||+|.+..+..+++.++++|+++.+|...  .
T Consensus       217 ~~~~~~k~~~~~~~g~~~~i~~--~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  291 (365)
T cd08278         217 VDIVDSRLELAKELGATHVINP--KEEDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGA  291 (365)
T ss_pred             EeCCHHHHHHHHHcCCcEEecC--CCcCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCC
Confidence            9999999999999999888764  3356666666653   5679999999997678899999999999999999652  2


Q ss_pred             CccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          216 EMTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       216 ~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ...++...+..+++.+.+....    .+.+++++++++++.+.+.+.+ ..+++  +++++|++.+.+++ ..|++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l--~~~~~a~~~~~~~~-~~k~~~~  365 (365)
T cd08278         292 EVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF--EDINQAIADSESGK-VIKPVLR  365 (365)
T ss_pred             ccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH--HHHHHHHHHHHCCC-ceEEEEC
Confidence            3345555555778888776532    4567889999999988443333 46777  99999999998874 4588874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.4e-35  Score=254.89  Aligned_cols=283  Identities=31%  Similarity=0.504  Sum_probs=229.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCC--ceEE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFK   77 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~--~~~~   77 (290)
                      ++|+|++|+|+++|+++++|++||+|+..+..+|+.|.+|+.+..++|+.....  .+...+|+|++|++++++  ++++
T Consensus        57 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  136 (347)
T cd05278          57 ILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAK  136 (347)
T ss_pred             eeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEE
Confidence            689999999999999999999999999999999999999999999999876532  222357999999999987  8999


Q ss_pred             CCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           78 LPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        78 ~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +|+++++.+++.+ ..+.|||+++...+++++++|||+|+|.+|++++|+|+.+|...++++++++++.++++++|++.+
T Consensus       137 lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~v  216 (347)
T cd05278         137 IPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDI  216 (347)
T ss_pred             CCCCCCHHHHhhhcchhhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEE
Confidence            9999999999877 478899999866788999999998889999999999999997568888888999999999998888


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccc-cchhhhccCcEEEEee
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV-PLTPAAVREVDVVGVF  235 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~  235 (290)
                      +++.  ..++.+.+++..  .++++|++||++|+...+...+++|+++|+++.+|........ .....+.+++.+.+..
T Consensus       217 i~~~--~~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
T cd05278         217 INPK--NGDIVEQILELT--GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL  292 (347)
T ss_pred             EcCC--cchHHHHHHHHc--CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec
Confidence            7743  345666665542  4568999999999756889999999999999999854332211 1112235566666543


Q ss_pred             ec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEeC
Q 022879          236 RY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  290 (290)
Q Consensus       236 ~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~~  290 (290)
                      .. .+.+++++++++++.+.+.+.+...+++  ++++++++.+..++. .+|+|++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         293 VPVRARMPELLDLIEEGKIDPSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             cCchhHHHHHHHHHHcCCCChhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEecC
Confidence            33 5678999999999998654445677788  999999999887766 68998863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.6e-35  Score=251.58  Aligned_cols=280  Identities=39%  Similarity=0.701  Sum_probs=232.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++.|++||+|+..+..+|+.|..|..+++|+|......+ .+..|+|++|+.++++ ++++|++
T Consensus        56 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~  133 (337)
T cd08261          56 ILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEG  133 (337)
T ss_pred             ccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCC
Confidence            5799999999999999999999999999888899999999999999996443333 2346999999999999 9999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++.+++.++.+.+++++++..+++++++|||+|+|.+|++++|+|+.+|+ .++++.+++++.++++++++++++++. 
T Consensus       134 ~~~~~aa~~~~~~~a~~~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~-  211 (337)
T cd08261         134 LSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG-  211 (337)
T ss_pred             CCHHHhhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc-
Confidence            999999877777888888866889999999999889999999999999999 578887889999999999999988754 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CCc
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNT  240 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~  240 (290)
                       ..++.+.+.+..  .+.++|++||++|+...+..++++++++|+++.+|.......++...+..+.+++.+.... .+.
T Consensus       212 -~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (337)
T cd08261         212 -DEDVAARLRELT--DGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATRED  288 (337)
T ss_pred             -ccCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhh
Confidence             345666666543  4567999999998767889999999999999999865433334444455677777765433 567


Q ss_pred             HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEeC
Q 022879          241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  290 (290)
Q Consensus       241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~~  290 (290)
                      ++++++++++|.+.+.+.+...+++  +++.++++.+.++ ...+|+|+++
T Consensus       289 ~~~~~~l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         289 FPDVIDLLESGKVDPEALITHRFPF--EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHHHcCCCChhhheEEEeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence            8999999999999553246677888  9999999999988 4779999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-35  Score=252.76  Aligned_cols=272  Identities=30%  Similarity=0.488  Sum_probs=220.9

Q ss_pred             ccccceeEEEEEeCCCCCC-CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|+|++|+|+++|+++++ |++||+|++.+..+|+.|..|..+..           ....|+|+||+.++.++++++|+
T Consensus        66 ~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~  134 (341)
T cd08262          66 VLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPD  134 (341)
T ss_pred             ccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCC
Confidence            5799999999999999987 99999999999999999999954321           12469999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++.+++.+..+++||+++..++++++++|||+|+|++|++++|+++.+|++.++++++++++.++++++|++++++++
T Consensus       135 ~~s~~~a~~~~~~~~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~  214 (341)
T cd08262         135 GLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPA  214 (341)
T ss_pred             CCCHHHhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCC
Confidence            99999888656888999887668899999999998899999999999999998788888899999999999998887754


Q ss_pred             CCcc--cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          161 TNLQ--DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       161 ~~~~--~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ....  .+. .+.+.  ..+.++|++||++|.+..+..++++++++|+++.+|.......+.......+++++.+.... 
T Consensus       215 ~~~~~~~~~-~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (341)
T cd08262         215 ADSPFAAWA-AELAR--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYT  291 (341)
T ss_pred             CcCHHHHHH-HHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEeccc
Confidence            3211  121 22222  34567999999999755778899999999999999865332222222234577777765544 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .+.++++++++++|.+.+.+.+.+.+++  ++++++++.+.+++..+|+|++
T Consensus       292 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         292 PEEFADALDALAEGKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence            4578999999999999765566788888  9999999999999889999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=4.1e-35  Score=253.72  Aligned_cols=279  Identities=27%  Similarity=0.421  Sum_probs=233.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++++++||+|++.+...|+.|..|+.++.++|....+.+. ...|+|++|+.++.++++++|++
T Consensus        69 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~  147 (350)
T cd08240          69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGG  147 (350)
T ss_pred             ccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCC
Confidence            57999999999999999999999999999999999999999999999987655543 36799999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ ..+.+||+++.. ....++++|||+|+|++|++++|+|+.+|++.++++++++++.+.++++|++.+++.
T Consensus       148 ~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  227 (350)
T cd08240         148 LDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG  227 (350)
T ss_pred             CCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence            999999876 578899999876 445689999999889999999999999999778888899999999999998877663


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                        ...++.+.+.+..  .+ ++|++||++|.+..+..++++|+++|+++.+|........+...+.++++++.+.... .
T Consensus       228 --~~~~~~~~~~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~  302 (350)
T cd08240         228 --SDPDAAKRIIKAA--GG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSL  302 (350)
T ss_pred             --CCccHHHHHHHHh--CC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCH
Confidence              3345555555442  33 7999999999767889999999999999999865443334444556688888887655 4


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +++..++++++++.+++  .....+++  +++++|++.+.+++..+|+++++
T Consensus       303 ~~~~~~~~ll~~~~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         303 EELRELVALAKAGKLKP--IPLTERPL--SDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             HHHHHHHHHHHcCCCcc--ceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence            67889999999998843  34567788  99999999999888889999864

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.2e-35  Score=249.49  Aligned_cols=268  Identities=29%  Similarity=0.489  Sum_probs=225.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|+|++|+|+++|++   +++||+|...+..+|++|.+|..+..+.|......+....+|+|++|+.+++++++++|+
T Consensus        52 ~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~  128 (319)
T cd08242          52 GVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPD  128 (319)
T ss_pred             CccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcC
Confidence            36899999999999998   789999999999999999999999999999877665434579999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++.+++.+.++++++.+++..+++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++.
T Consensus       129 ~~~~~~aa~~~~~~~~~~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~  207 (319)
T cd08242         129 LVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDE  207 (319)
T ss_pred             CCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcc
Confidence            99999888655566777777778899999999998899999999999999995 88888889999999999988776542


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCc
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  240 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (290)
                      .  .           +.+.++|++||++|....+...+++++++|+++..+.......++...+..++.++.+....  .
T Consensus       208 ~--~-----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~  272 (319)
T cd08242         208 A--E-----------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--P  272 (319)
T ss_pred             c--c-----------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--c
Confidence            1  0           24567999999999867888999999999999987754444445555567788888876543  3


Q ss_pred             HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +++++++++++.+++.+.+.+.|++  +++++|++.+.++. .+|+|++.
T Consensus       273 ~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         273 FAPALRLLRKGLVDVDPLITAVYPL--EEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHHHHHHHcCCCChhhceEEEEeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence            8899999999999766667888888  99999999998764 58999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=9.2e-35  Score=252.53  Aligned_cols=280  Identities=33%  Similarity=0.523  Sum_probs=227.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---------------cC----CCCCc
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHG   62 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g   62 (290)
                      ++|+|++|+|+++|+++++|++||+|++.+..+|++|++|+.++.++|......               |.    ....|
T Consensus        56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  135 (363)
T cd08279          56 VLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLG  135 (363)
T ss_pred             cccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCc
Confidence            689999999999999999999999999999999999999999999999865321               00    02469


Q ss_pred             ccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879           63 SLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus        63 ~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      +|++|+.++++.++++|+++++.+++.++ .+.+||.++. ...++++++|||+|+|++|++++++|+.+|++.++++++
T Consensus       136 ~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~  215 (363)
T cd08279         136 TFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDP  215 (363)
T ss_pred             cceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcC
Confidence            99999999999999999999999998774 6788888864 478899999999977999999999999999965888889


Q ss_pred             ChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Ccc
Q 022879          141 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMT  218 (290)
Q Consensus       141 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~  218 (290)
                      ++++.++++++|++++++.  ...++...+.++.  .+.++|++||+++....+...+++++++|+++.+|....  ...
T Consensus       216 ~~~~~~~~~~~g~~~vv~~--~~~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  291 (363)
T cd08279         216 VPEKLELARRFGATHTVNA--SEDDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVS  291 (363)
T ss_pred             CHHHHHHHHHhCCeEEeCC--CCccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccc
Confidence            9999999999999887764  3346666666553  356799999999976788999999999999999986442  233


Q ss_pred             ccchhhhccCcEEEEeee----cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEE
Q 022879          219 VPLTPAAVREVDVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM  287 (290)
Q Consensus       219 ~~~~~~~~~~~~i~~~~~----~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v  287 (290)
                      ++...+..+...+.+...    ..+.+++++++++++.+.+.+.+.+++++  +++++|++.+.+++..+.++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         292 LPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI  362 (363)
T ss_pred             cCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence            444445556666666532    25678999999999998655556777888  99999999998876554433

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.8e-35  Score=252.76  Aligned_cols=282  Identities=31%  Similarity=0.526  Sum_probs=234.5

Q ss_pred             ccccceeEEEEEeCCCCCC---CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC---------------------
Q 022879            2 VIGHECAGVIEKVGSEVKT---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------   57 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------   57 (290)
                      ++|||++|+|+.+|+++++   |++||+|++.+..+|+.|.+|..+.+++|++...|..                     
T Consensus        56 ~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (367)
T cd08263          56 VLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY  135 (367)
T ss_pred             ccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc
Confidence            6899999999999999988   9999999999889999999999999999997542211                     


Q ss_pred             CCCCcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeE
Q 022879           58 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRI  135 (290)
Q Consensus        58 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~v  135 (290)
                      ...+|+|++|+.+++++++++|+++++.+++.+ ..+.|||+++.. ..+.+++++||+|+|.+|++++++|+.+|++.+
T Consensus       136 ~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~v  215 (367)
T cd08263         136 MYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPI  215 (367)
T ss_pred             cccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeE
Confidence            023699999999999999999999999999877 478899999865 677899999999889999999999999999668


Q ss_pred             EEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879          136 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       136 v~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      +++++++++.++++++|++.+++++  ..++.+.+++..  .+.++|++||++++......++++++++|+++.++....
T Consensus       216 i~~~~s~~~~~~~~~~g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (367)
T cd08263         216 IAVDVRDEKLAKAKELGATHTVNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG  291 (367)
T ss_pred             EEEeCCHHHHHHHHHhCCceEecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence            8888899999999999998888743  456666666543  456799999999985478899999999999999986442


Q ss_pred             --CccccchhhhccCcEEEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          216 --EMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       216 --~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                        ...+....++.+++++.+....  .+.+++++++++++.+.+.+.+++.+++  +++.++++.+.+++..||+|+.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         292 GATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence              2234444455678888776543  3678999999999998655556777888  9999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1e-34  Score=250.26  Aligned_cols=279  Identities=33%  Similarity=0.584  Sum_probs=230.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.+++||+|++.+..+|+.|.+|..+.+|+|+..+..+ ....|+|++|+.+++++++++|++
T Consensus        60 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          60 IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG-VDTDGCFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             ccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEe-ccCCCcceEEEEechHHcEECcCC
Confidence            6799999999999999999999999999988999999999999999998765444 345799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      ++++.++++.++.++++++. ...+++++|||+|+|++|++++++++.+|.+.++++++++++.++++++|.+++++++ 
T Consensus       139 ~~~~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~-  216 (341)
T cd05281         139 IPPEIASIQEPLGNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR-  216 (341)
T ss_pred             CCHHHhhhhhHHHHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc-
Confidence            99876666678888888775 3457899999998899999999999999986577888899999999999998877632 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch-hhhccCcEEEEeeec--C
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--K  238 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~  238 (290)
                       ..++. .+.++.  .++++|++||++|.......++++|+++|+++.+|.......++.. ....+++++.+....  .
T Consensus       217 -~~~~~-~~~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (341)
T cd05281         217 -EEDVV-EVKSVT--DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMF  292 (341)
T ss_pred             -cccHH-HHHHHc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcc
Confidence             34555 555543  4568999999998777888999999999999999865433233322 356677777776533  4


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.++++++++.++.+.+.+.+...+++  +++++|++.+.+++ .+|+|++.
T Consensus       293 ~~~~~~~~~l~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         293 ETWYQVSALLKSGKVDLSPVITHKLPL--EDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             hhHHHHHHHHHcCCCChhHheEEEecH--HHHHHHHHHHhcCC-CceEEecC
Confidence            568889999999998655666677788  99999999999888 89999863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.1e-34  Score=250.65  Aligned_cols=280  Identities=29%  Similarity=0.490  Sum_probs=230.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC--ceEECC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLP   79 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P   79 (290)
                      ++|||++|+|+++|++++.+++||+|++....+|+.|.+|..++.+.|.+....+ ...+|+|+||+.++.+  .++++|
T Consensus        56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP  134 (345)
T cd08287          56 PIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVP  134 (345)
T ss_pred             ccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECC
Confidence            6899999999999999999999999998667789999999999999999876655 3578999999999975  999999


Q ss_pred             CCCChhhhhh-----h-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           80 DNVSLEEGAM-----C-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        80 ~~~~~~~aa~-----~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      +++++..+..     + ..+++|++++..+.++++++++|+|+|++|++++|+|+.+|++.++++++++++.++++++|+
T Consensus       135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga  214 (345)
T cd08287         135 GSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGA  214 (345)
T ss_pred             CCCChhhhhhhhhHhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence            9998722211     1 357788888877888999999998889999999999999999778999889999999999999


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEE
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  233 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  233 (290)
                      +.++++.  ..++.+.+.+..  .+.++|+++|++|++..+..++++++++|+++.+|.......++....+.+++.+.+
T Consensus       215 ~~v~~~~--~~~~~~~i~~~~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (345)
T cd08287         215 TDIVAER--GEEAVARVRELT--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAG  290 (345)
T ss_pred             ceEecCC--cccHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEE
Confidence            8888753  345656665542  456899999999877788999999999999999986543334444455678888877


Q ss_pred             eeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          234 VFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       234 ~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .... .+.+++++++++++.+++.+.+.+.+++  +++++|++.+.+.+. .|++|+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         291 GPAPVRRYLPELLDDVLAGRINPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             ecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence            5444 6689999999999998654456677888  999999999887644 599886

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1e-34  Score=249.91  Aligned_cols=273  Identities=24%  Similarity=0.394  Sum_probs=227.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEE-cCCcCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCCc
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADL   74 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~   74 (290)
                      ++|||++|+|+++|+++++|++||+|++ .....|++|++|+.++.++|+++.+..      +...+|+|+||+.+++++
T Consensus        56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  135 (337)
T cd05283          56 VPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF  135 (337)
T ss_pred             ccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh
Confidence            6899999999999999999999999984 344589999999999999999876542      223479999999999999


Q ss_pred             eEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           75 CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        75 ~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      ++++|+++++.+++.+ ..+.+||++++...++++++++|.|+|.+|++++++++.+|+ .++++++++++.++++++|+
T Consensus       136 ~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~  214 (337)
T cd05283         136 VFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGA  214 (337)
T ss_pred             eEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCC
Confidence            9999999999998876 477889999877778999999998889999999999999999 68888888899999999998


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEE
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  233 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  233 (290)
                      +.+++..  ..++.   +.    .++++|++|||+|.......++++++++|+++.+|.......++...++.+++++.+
T Consensus       215 ~~vi~~~--~~~~~---~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  285 (337)
T cd05283         215 DEFIATK--DPEAM---KK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAG  285 (337)
T ss_pred             cEEecCc--chhhh---hh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEE
Confidence            8877632  22221   11    246799999999985458899999999999999996544334555556778999998


Q ss_pred             eeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          234 VFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       234 ~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .... .++++.+++++++++++  +.+ +.+++  +++++|++.+.+++..+|+|++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         286 SLIGGRKETQEMLDFAAEHGIK--PWV-EVIPM--DGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             ecccCHHHHHHHHHHHHhCCCc--cce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence            8765 56789999999999884  333 57888  9999999999999888999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-34  Score=248.21  Aligned_cols=280  Identities=31%  Similarity=0.499  Sum_probs=232.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC--ceEECC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLP   79 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P   79 (290)
                      ++|+|++|+|+.+|++++.|++||+|+..+..+|++|.+|+.|..++|.++...+. ..+|+|++|+.+++.  +++++|
T Consensus        57 ~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP  135 (345)
T cd08260          57 VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLP  135 (345)
T ss_pred             eeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECC
Confidence            57999999999999999999999999986667899999999999999999754333 347999999999985  899999


Q ss_pred             CCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           80 DNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        80 ~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      +++++.+++.++ .+.+||+++. ..++.++++++|+|+|++|++++++|+.+|+ .++++.+++++.+.++++|++.++
T Consensus       136 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i  214 (345)
T cd08260         136 DDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATV  214 (345)
T ss_pred             CCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEE
Confidence            999999888774 7889999985 4788999999999999999999999999999 578888889999999999998888


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC---ccccchhhhccCcEEEEe
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~  234 (290)
                      +++. ..++...+.++.  .+ ++|++||++|........+++++++|+++.+|.....   ..++...+..+.+++.+.
T Consensus       215 ~~~~-~~~~~~~~~~~~--~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (345)
T cd08260         215 NASE-VEDVAAAVRDLT--GG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGS  290 (345)
T ss_pred             cccc-chhHHHHHHHHh--CC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeC
Confidence            7432 145666665543  33 7999999999767888999999999999999864322   234444455778888887


Q ss_pred             eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ... ...+++++++++++.+.+.+.+.+.+++  +++++|++.+.+++..+|+|++
T Consensus       291 ~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         291 HGMPAHRYDAMLALIASGKLDPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             CcCCHHHHHHHHHHHHcCCCChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence            654 6678999999999988654446677888  9999999999998888998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=9.8e-34  Score=244.45  Aligned_cols=279  Identities=39%  Similarity=0.682  Sum_probs=230.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.|++||+|++.+..+|+.|.+|..+..+.|+.....+. ...|+|++|+.+++++++++|++
T Consensus        55 ~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~  133 (343)
T cd08236          55 VLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDH  133 (343)
T ss_pred             ccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCC
Confidence            57999999999999999999999999999988999999999999999988765554 36799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++.+++.++.+.+||+++....++++++|||+|+|.+|++++|+|+.+|++.++++++++++.++++.+|.+.+++++.
T Consensus       134 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~  213 (343)
T cd08236         134 VDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE  213 (343)
T ss_pred             CCHHHHHhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc
Confidence            99999988777889999987778899999999988999999999999999965888888888999999999888877542


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccc---cchhhhccCcEEEEeeec-
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV---PLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~-  237 (290)
                        .. .+.+.+.  ..+.++|++|||+|....+..++++|+++|+++.+|.......+   +...++.++..+.+.... 
T Consensus       214 --~~-~~~~~~~--~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (343)
T cd08236         214 --ED-VEKVREL--TEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSY  288 (343)
T ss_pred             --cc-HHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecc
Confidence              33 4455444  24567999999998767888999999999999999855433222   223345677777776543 


Q ss_pred             -----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhc-CCCceeEEE
Q 022879          238 -----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF  288 (290)
Q Consensus       238 -----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vl  288 (290)
                           .+.++++.++++++.+.+.+.+...+++  +++.++++.+.+ +...+|+|+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         289 SAPFPGDEWRTALDLLASGKIKVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             ccccchhhHHHHHHHHHcCCCChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence                 4568889999999988543446677788  999999999998 666788875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=9.8e-34  Score=243.59  Aligned_cols=277  Identities=39%  Similarity=0.631  Sum_probs=231.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|+++++|++||+|+..+...|+.|.+|..+++++|....+++. +..|+|++|+.+++++++++|++
T Consensus        55 ~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~  133 (334)
T cd08234          55 VPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDN  133 (334)
T ss_pred             ccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCC
Confidence            68999999999999999999999999999999999999999999999999876543 35799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++.+++.+..+.+++++++.+++++++++||+|+|.+|++++++|+.+|++.++++++++++.+.++++|.+.+++++.
T Consensus       134 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~  213 (334)
T cd08234         134 LSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR  213 (334)
T ss_pred             CCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC
Confidence            99999887677778888886688999999999988999999999999999965888889999999999999887776432


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhhccCcEEEEeeecCC
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRYKN  239 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~  239 (290)
                        .++...  +  ...++++|++||++|.+......+++++++|+++.+|.....  ..+....+..+++.+.+......
T Consensus       214 --~~~~~~--~--~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (334)
T cd08234         214 --EDPEAQ--K--EDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPY  287 (334)
T ss_pred             --CCHHHH--H--HhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHH
Confidence              333333  1  234578999999998767888999999999999999865432  22332334457778877766566


Q ss_pred             cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       240 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      .+++++++++++.+.+.+.+++++++  +++.++++.+.+ +..+|+|+
T Consensus       288 ~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         288 TFPRAIALLESGKIDVKGLVSHRLPL--EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHcCCCChhhhEEEEecH--HHHHHHHHHHhc-CCceEEEe
Confidence            78999999999998655556677888  999999999998 78889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-34  Score=246.13  Aligned_cols=248  Identities=18%  Similarity=0.213  Sum_probs=202.7

Q ss_pred             cccc--ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc--eEE
Q 022879            2 VIGH--ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK   77 (290)
Q Consensus         2 i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~   77 (290)
                      ++|+  |++|+|..+|+++++|++||+|+.                               .|+|+||+.+++..  +.+
T Consensus        75 ~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~  123 (348)
T PLN03154         75 VPGQRIEGFGVSKVVDSDDPNFKPGDLISG-------------------------------ITGWEEYSLIRSSDNQLRK  123 (348)
T ss_pred             CCCCeeEeeEEEEEEecCCCCCCCCCEEEe-------------------------------cCCcEEEEEEeccccceEE
Confidence            6787  889999999999999999999984                               26899999998753  544


Q ss_pred             --CCCCCChh-hhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H
Q 022879           78 --LPDNVSLE-EGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E  150 (290)
Q Consensus        78 --~P~~~~~~-~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~  150 (290)
                        +|+++++. +|+.+ ..+.|||+++.. +.+++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++ +
T Consensus       124 ~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~  202 (348)
T PLN03154        124 IQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK  202 (348)
T ss_pred             ccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHh
Confidence              48999986 56555 588899999854 78999999999988 9999999999999999 5888889999999887 7


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-c-----cccchhh
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPA  224 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~  224 (290)
                      +|++.++++.. ..++.+.++++.   ++++|++||++|+ ..+..++++++++|+++.+|..... .     .++...+
T Consensus       203 lGa~~vi~~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  277 (348)
T PLN03154        203 LGFDEAFNYKE-EPDLDAALKRYF---PEGIDIYFDNVGG-DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNL  277 (348)
T ss_pred             cCCCEEEECCC-cccHHHHHHHHC---CCCcEEEEECCCH-HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHH
Confidence            99999988532 235666665542   3589999999996 6889999999999999999964322 1     1233456


Q ss_pred             hccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          225 AVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       225 ~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+++++.|.+..      .+.++++++++++|++  ++.+...|+|  +++++|++.+.+++..||+||++
T Consensus       278 ~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        278 ISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             hhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            7788999887643      3457889999999999  4556667888  99999999999999999999974

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.3e-33  Score=243.07  Aligned_cols=277  Identities=31%  Similarity=0.558  Sum_probs=233.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++++++||+|+..+..+|+.|..|+.++.++|......+ .+.+|+|++|+.++.+.++++|++
T Consensus        59 ~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~  137 (338)
T cd08254          59 TLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPG-LGIDGGFAEYIVVPARALVPVPDG  137 (338)
T ss_pred             eccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccc-cccCCcceeeEEechHHeEECCCC
Confidence            5799999999999999999999999999998999999999999999997654433 356799999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ ..+.+||+++.. ..++++++|||.|+|.+|++++++|+.+|+ .++++++++++.+.++.+|.+.++..
T Consensus       138 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~  216 (338)
T cd08254         138 VPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNS  216 (338)
T ss_pred             CCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence            999998877 588999998865 678999999998889999999999999999 58888899999999999998887763


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                      .  ...+.+.+ +  ...++++|+++|++|....+..++++|+++|+++.+|.......++...+..++..+.+.+.. .
T Consensus       217 ~--~~~~~~~~-~--~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (338)
T cd08254         217 L--DDSPKDKK-A--AGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTP  291 (338)
T ss_pred             C--CcCHHHHH-H--HhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCH
Confidence            3  33444444 2  235678999999998777889999999999999999865544445555667788888877655 6


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.++.++++++++.+.+.   .+.+++  ++++++++.+.+++..+|+|+++
T Consensus       292 ~~~~~~~~ll~~~~l~~~---~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         292 EDLPEVLDLIAKGKLDPQ---VETRPL--DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHHHcCCCccc---ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            788999999999998543   456777  99999999999998889999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-33  Score=242.76  Aligned_cols=278  Identities=29%  Similarity=0.446  Sum_probs=233.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|+|++|+|+++|++++.|++||+|+..+ ...|+.|.+|..++.++|+.....+. ...|+|++|+.++++.++++|+
T Consensus        59 ~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~  137 (341)
T cd08297          59 IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPD  137 (341)
T ss_pred             cCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCC
Confidence            579999999999999999999999999875 45789999999999999998876654 4579999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ++++.+++.+ ..+.|||+++...++++++++||+|+ +.+|++++++|+++|+ .++++.+++++.+.++++|++.+++
T Consensus       138 ~~~~~~~a~l~~~~~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  216 (341)
T cd08297         138 GLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD  216 (341)
T ss_pred             CCCHHHHHHHHcchHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence            9999998866 57889999987778899999999987 7799999999999999 5888889999999999999988877


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +.  ..++.+.+.++.  .++++|++||+.+....+..++++++++|+++.+|..... ..++...++.+++.+.+....
T Consensus       217 ~~--~~~~~~~~~~~~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (341)
T cd08297         217 FK--KSDDVEAVKELT--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG  292 (341)
T ss_pred             CC--CccHHHHHHHHh--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC
Confidence            53  336666666542  4578999999877768889999999999999999865432 234444456788888875543


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       .+.+++++++++++.+.  +.+ ..|++  +++.++++.+..+...+|++++|
T Consensus       293 ~~~~~~~~~~~~~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         293 TRQDLQEALEFAARGKVK--PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             CHHHHHHHHHHHHcCCCc--cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence             57789999999999884  333 46777  99999999999988899999975

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=243.62  Aligned_cols=277  Identities=26%  Similarity=0.469  Sum_probs=226.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|+++++|++||+|++.+ ..+|+.|..|..+..++|......+. ..+|+|+||+.++..+++++|+
T Consensus        56 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~  134 (338)
T PRK09422         56 ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPE  134 (338)
T ss_pred             cCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCC
Confidence            689999999999999999999999999754 34799999999999999987765443 4579999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ++++.+++.+ ..+.|||++++.+.++++++|||+|+|++|++++++++. +|+ .++++++++++.++++++|++.+++
T Consensus       135 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  213 (338)
T PRK09422        135 GLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN  213 (338)
T ss_pred             CCCHHHeehhhcchhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEec
Confidence            9999999877 477899999877889999999999999999999999998 599 5888889999999999999988876


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ++. ..++.+.+++.   .+ ++|+++.+.+.+..+..++++++++|+++.+|.......++...+..+...+.+.... 
T Consensus       214 ~~~-~~~~~~~v~~~---~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (338)
T PRK09422        214 SKR-VEDVAKIIQEK---TG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGT  288 (338)
T ss_pred             ccc-cccHHHHHHHh---cC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCC
Confidence            421 23455555544   23 6885555555567899999999999999999865443344445566678888776543 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+.++.+++++++|.+.  +.+. .+++  +++++|++.+.+++..+|+++++
T Consensus       289 ~~~~~~~~~l~~~g~l~--~~v~-~~~~--~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        289 RQDLEEAFQFGAEGKVV--PKVQ-LRPL--EDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             HHHHHHHHHHHHhCCCC--ccEE-EEcH--HHHHHHHHHHHcCCccceEEEec
Confidence            56788999999999883  3443 5677  99999999999998889999864

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.1e-33  Score=244.96  Aligned_cols=281  Identities=27%  Similarity=0.426  Sum_probs=226.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCcc---------ccCCCCCcccceeEeec
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHP   71 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~e~~~v~   71 (290)
                      +++|||++|+|+++|++++.+++||+|+..+..+|+.|..|..++.++|....+         .+..+.+|+|+||+.++
T Consensus        55 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~  134 (375)
T cd08282          55 LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVP  134 (375)
T ss_pred             ceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEee
Confidence            368999999999999999999999999999999999999999999999976421         11223469999999999


Q ss_pred             CC--ceEECCCCCChhh---hhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 022879           72 AD--LCFKLPDNVSLEE---GAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL  145 (290)
Q Consensus        72 ~~--~~~~~P~~~~~~~---aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~  145 (290)
                      ..  +++++|+++++.+   ++.+ ..++++|+++..++++++++|+|+|+|++|++++|+++.+|+..++++++++++.
T Consensus       135 ~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~  214 (375)
T cd08282         135 YADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERL  214 (375)
T ss_pred             cccCcEEECCCCCChhhhhheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            76  8999999999984   4544 5788999999668899999999998899999999999999986677899999999


Q ss_pred             HHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH-----------HHHHHHHHhccCCEEEEeccCC
Q 022879          146 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK-----------TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       146 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++++++|+. .+++  ..+++.+.+.++.   ++++|++|||+|.+.           .+..++++++++|+++.+|...
T Consensus       215 ~~~~~~g~~-~v~~--~~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~  288 (375)
T cd08282         215 DLAESIGAI-PIDF--SDGDPVEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV  288 (375)
T ss_pred             HHHHHcCCe-Eecc--CcccHHHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccC
Confidence            999999984 4443  3356666666553   257999999999742           4788999999999999887532


Q ss_pred             CC-------------ccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC
Q 022879          215 HE-------------MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG  280 (290)
Q Consensus       215 ~~-------------~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  280 (290)
                      ..             ..++...++.++..+.+.... .+.++.+++++.++.+.+...+.+.+++  ++++++++.+.++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~  366 (375)
T cd08282         289 AEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKR  366 (375)
T ss_pred             CcccccccccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcC
Confidence            11             122334455667766665543 5678889999999999654457888888  9999999999988


Q ss_pred             CCceeEEEeC
Q 022879          281 GTAIKVMFNL  290 (290)
Q Consensus       281 ~~~gk~vl~~  290 (290)
                      + .+|+|+++
T Consensus       367 ~-~~kvvv~~  375 (375)
T cd08282         367 L-ETKVVIKP  375 (375)
T ss_pred             C-ceEEEeCC
Confidence            7 88999864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-34  Score=243.91  Aligned_cols=272  Identities=27%  Similarity=0.444  Sum_probs=226.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.+++||+|++.+..+|+.|.+|..+..++|+...+++. ..+|+|++|+.++.++++++|++
T Consensus        57 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~  135 (334)
T PRK13771         57 ILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPN  135 (334)
T ss_pred             eccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCC
Confidence            57999999999999999889999999998888999999999999999998877654 45799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.++ .+.++|+++....++++++++|+|+ |.+|++++++++.+|+ .++++++++++.+.++.+ ++.+++.
T Consensus       136 ~~~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~  213 (334)
T PRK13771        136 VSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVG  213 (334)
T ss_pred             CCHHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCc
Confidence            9999988774 7888999887668889999999988 9999999999999999 578888889998988888 6655542


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc--ccchhhhccCcEEEEeeec
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~  237 (290)
                      +    ++.+.++++     .++|++||++|+ .....+++.++++|+++.+|.......  ........+++++.+....
T Consensus       214 ~----~~~~~v~~~-----~~~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
T PRK13771        214 S----KFSEEVKKI-----GGADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA  283 (334)
T ss_pred             h----hHHHHHHhc-----CCCcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC
Confidence            1    344444432     269999999997 578899999999999999996433222  3333345677888776544


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       .+.+++++++++++.+  .+.+.+.+++  +++++|++.+.+++..+|++++.
T Consensus       284 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        284 TKRDVEEALKLVAEGKI--KPVIGAEVSL--SEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             CHHHHHHHHHHHHcCCC--cceEeeeEcH--HHHHHHHHHHHcCCCcceEEEec
Confidence             6678999999999988  4456678888  99999999999887889998863

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=3.1e-33  Score=239.47  Aligned_cols=249  Identities=19%  Similarity=0.251  Sum_probs=202.0

Q ss_pred             ccccceeEEEEEeCCCCCC-CCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|+++++ |++||+|++.+.                           .+|+|+||+.++++.++++|+
T Consensus        63 v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~  115 (324)
T cd08291          63 PPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPD  115 (324)
T ss_pred             CCCcceEEEEEEECCCccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCC
Confidence            6899999999999999996 999999986321                           149999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEE-CC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~-Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++.+++.+ ..+.|||.+++.... ++++++|+ |+ |++|++++|+|+.+|+ .++++++++++.++++++|+++++
T Consensus       116 ~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i  193 (324)
T cd08291         116 GVSFEQGASSFVNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVL  193 (324)
T ss_pred             CCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence            9999998855 466678766555554 56667665 55 9999999999999999 588888999999999999999988


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-c-cccchhhhccCcEEEEee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-TVPLTPAAVREVDVVGVF  235 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~  235 (290)
                      ++.  .+++.+.++++.  .++++|++||++|+ ......+.+++++|+++.+|..... . .++...++.+++++.+.+
T Consensus       194 ~~~--~~~~~~~v~~~~--~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (324)
T cd08291         194 NSS--DPDFLEDLKELI--AKLNATIFFDAVGG-GLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFW  268 (324)
T ss_pred             ECC--CccHHHHHHHHh--CCCCCcEEEECCCc-HHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEE
Confidence            743  457777776653  45689999999997 4667789999999999999864322 2 244555677888888876


Q ss_pred             ec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          236 RY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       236 ~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ..       .+.+++++++++ +.+  ++.+++.|++  +|+.+|++.+.+++..||+++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         269 LTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence            43       235778888887 766  6778889999  9999999999998889999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-32  Score=236.76  Aligned_cols=272  Identities=32%  Similarity=0.556  Sum_probs=224.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++.|++||+|++....+|++|.+|..+.+++|+....++ ....|+|++|+.++...++++|++
T Consensus        57 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~  135 (332)
T cd08259          57 ILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDN  135 (332)
T ss_pred             eccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCC
Confidence            5799999999999999999999999999999999999999999999999875544 355799999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++++++.+ ..+.+||++++.+.+++++++||+|+ |.+|++++++++..|. .++++.+++++.+.++.++.+.+++.
T Consensus       136 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~  214 (332)
T cd08259         136 VSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDG  214 (332)
T ss_pred             CCHHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            999988876 48889999987788899999999987 9999999999999999 57777788888888888888776653


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      .    ++.+.+.+.     .++|++++++|. ......++.++++|+++.++...... .+.......++..+.+.... 
T Consensus       215 ~----~~~~~~~~~-----~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (332)
T cd08259         215 S----KFSEDVKKL-----GGADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISAT  284 (332)
T ss_pred             H----HHHHHHHhc-----cCCCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCC
Confidence            2    144444432     279999999997 46788999999999999998644321 22333344567776666443 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .+.+++++++++++.+  .+.+.+.+++  +++.+|++.+.+++..+|++++
T Consensus       285 ~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         285 KADVEEALKLVKEGKI--KPVIDRVVSL--EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHHcCCC--ccceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence            5678899999999988  4456778888  9999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.3e-32  Score=234.48  Aligned_cols=278  Identities=30%  Similarity=0.503  Sum_probs=228.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|+++++|++||+|++.++.+|+.|.+|..+.+++|+...+.|. ...|+|++|+.++++.++++|++
T Consensus        60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~  138 (342)
T cd08266          60 ILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDN  138 (342)
T ss_pred             ecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCC
Confidence            57999999999999999999999999999999999999999999999998755543 45799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.++ .+.++++++.. ..+.++++++|+|+ +.+|++++++++..|+ .++.++.++++.+.++.++.+.+++
T Consensus       139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~  217 (342)
T cd08266         139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID  217 (342)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence            9999888774 67889988754 78899999999988 7999999999999999 5778888888888888888776665


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~  237 (290)
                        ....++...+.+.  ..+.++|++++++|. ..+...++.++++|+++.++..... ..+.....+.+++.+.+....
T Consensus       218 --~~~~~~~~~~~~~--~~~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T cd08266         218 --YRKEDFVREVREL--TGKRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG  292 (342)
T ss_pred             --cCChHHHHHHHHH--hCCCCCcEEEECCcH-HHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecC
Confidence              3334555555443  234679999999996 6788999999999999999854332 233333456677777776654


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       ...+.+++++++++.+  .+.+++.|++  +++++|++.+.++...+|+++++
T Consensus       293 ~~~~~~~~~~~l~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         293 TKAELDEALRLVFRGKL--KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             CHHHHHHHHHHHHcCCc--ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence             5578889999999987  4456777888  99999999998887789999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.5e-32  Score=233.46  Aligned_cols=265  Identities=24%  Similarity=0.350  Sum_probs=219.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|+++.++++||+|++.+ ..+|+.|.+|..+.+++|+.+.+.+. ..+|+|++|+.++.+.++++|+
T Consensus        61 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~  139 (329)
T cd08298          61 IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPE  139 (329)
T ss_pred             cccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCC
Confidence            689999999999999999999999998743 35789999999999999999887765 3579999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      ++++.+++.+ ..+.+||+++..+++++++++||+|+|++|++++++++..|+ .++++..++++.+.++++|++.+++.
T Consensus       140 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  218 (329)
T cd08298         140 DYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDS  218 (329)
T ss_pred             CCCHHHhhHhhhhhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEecc
Confidence            9999998866 588899999966889999999999889999999999999999 58888888899999999998777654


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ...              .++++|+++++.+....+..++++++++|+++.+|...... .++.. .+.+...+.+.... 
T Consensus       219 ~~~--------------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~  283 (329)
T cd08298         219 DDL--------------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLT  283 (329)
T ss_pred             Ccc--------------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCC
Confidence            321              23579999998776678899999999999999988532211 12222 23455566665544 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      .+.++.++++++++.+++  . .+.|++  +++++|++.+++++..+|+|+
T Consensus       284 ~~~~~~~~~l~~~~~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         284 RQDGEEFLKLAAEIPIKP--E-VETYPL--EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHHHHcCCCCc--e-EEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence            556888999999998843  3 467888  999999999999888899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-32  Score=236.37  Aligned_cols=267  Identities=22%  Similarity=0.320  Sum_probs=213.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|++.+..+|+.|..|.        .+..++. ..+|+|++|+.++++.++++|++
T Consensus        80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~  150 (350)
T cd08274          80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDYIGS-ERDGGFAEYTVVPAENAYPVNSP  150 (350)
T ss_pred             ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccccCC-CCCccceEEEEecHHHceeCCCC
Confidence            57999999999999999999999999998877777766532        1222221 23699999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ ..+.++|+++....+++++++||+|+ |++|++++++|+++|++ +++++.++ +.+.++++|++.+.+ 
T Consensus       151 ~~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~-  227 (350)
T cd08274         151 LSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVIL-  227 (350)
T ss_pred             CCHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEe-
Confidence            999988876 58889999987788999999999998 99999999999999995 66776655 788888999865443 


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                       .....+.+  .+  .+.+.++|++||++|+ ..+..++++++++|+++.+|..... ..++...++.+++++.+.... 
T Consensus       228 -~~~~~~~~--~~--~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (350)
T cd08274         228 -RDAPLLAD--AK--ALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT  301 (350)
T ss_pred             -CCCccHHH--HH--hhCCCCCcEEEecCCH-HHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC
Confidence             22223322  22  2356789999999997 6889999999999999999854332 344555567788888887665 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+.+++++++++++.+  .+.+.+.+++  +++.++++.+.+++..+|+++++
T Consensus       302 ~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         302 REVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            5678999999999988  4446677778  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-32  Score=234.39  Aligned_cols=264  Identities=27%  Similarity=0.415  Sum_probs=215.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|+..+..+|++|.+|..++.++|+...+++. ...|+|++|+.++++.++++|++
T Consensus        57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~  135 (325)
T cd08264          57 IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDS  135 (325)
T ss_pred             ecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCC
Confidence            57999999999999999999999999999999999999999999999998776653 35799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.++ .+.+||+++..++++++++++|+|+ |++|++++++|+.+|++ +++++    +.+.++++|++.+++.
T Consensus       136 ~~~~~~~~~~~~~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~  210 (325)
T cd08264         136 ISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDY  210 (325)
T ss_pred             CCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecc
Confidence            9999998774 6778999987788999999999998 99999999999999995 66664    2366678998877753


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +    ++.+.++++.    +++|+++|++|. ..+...+++++++|+++.+|... ....++...+..+..++.+.... 
T Consensus       211 ~----~~~~~l~~~~----~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T cd08264         211 D----EVEEKVKEIT----KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT  281 (325)
T ss_pred             h----HHHHHHHHHh----CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC
Confidence            2    2234454442    579999999996 68899999999999999998642 22344555566677777776554 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeE
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV  286 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~  286 (290)
                      ++.+++++++++...    ..+.+.|++  +++++|++.+.+++..+|+
T Consensus       282 ~~~~~~~~~l~~~~~----~~~~~~~~~--~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         282 RKELLELVKIAKDLK----VKVWKTFKL--EEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHHHHHHcCC----ceeEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence            567888999986433    235577888  9999999999887776665

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.6e-32  Score=235.80  Aligned_cols=250  Identities=21%  Similarity=0.276  Sum_probs=191.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||+|+..                              .++|+||++++++.++++|+
T Consensus        70 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------------------------------~~~~ae~~~v~~~~~~~iP~  119 (345)
T cd08293          70 LSQVLDGGGVGVVEESKHQKFAVGDIVTSF------------------------------NWPWQTYAVLDGSSLEKVDP  119 (345)
T ss_pred             CCCceEeeEEEEEeccCCCCCCCCCEEEec------------------------------CCCceeEEEecHHHeEEcCc
Confidence            368999999999999999999999999852                              15799999999999999999


Q ss_pred             CCChhh-----hhhhhhhHHHHHHHHh-cCCCCC--CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-
Q 022879           81 NVSLEE-----GAMCEPLSVGVHACRR-ANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-  150 (290)
Q Consensus        81 ~~~~~~-----aa~~~~~~ta~~~l~~-~~~~~~--~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-  150 (290)
                      ++++.+     ++...++.|||+++.. ++++++  ++|||+|+ |++|++++|+|+++|++.++++++++++.+++++ 
T Consensus       120 ~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~  199 (345)
T cd08293         120 QLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE  199 (345)
T ss_pred             cccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence            864432     2333578899999854 677776  99999987 9999999999999999558888889999888876 


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Cccc--cc----
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMTV--PL----  221 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~--~~----  221 (290)
                      +|++.++++.  .+++.+.++++.   ++++|++||++|+ ..+..++++++++|+++.+|....   +...  ..    
T Consensus       200 lGa~~vi~~~--~~~~~~~i~~~~---~~gvd~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  273 (345)
T cd08293         200 LGFDAAINYK--TDNVAERLRELC---PEGVDVYFDNVGG-EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEAT  273 (345)
T ss_pred             cCCcEEEECC--CCCHHHHHHHHC---CCCceEEEECCCc-HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchh
Confidence            9999988753  457777776652   3689999999997 467899999999999999984321   1111  11    


Q ss_pred             hhhh-ccCcEEEEeee--c----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          222 TPAA-VREVDVVGVFR--Y----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       222 ~~~~-~~~~~i~~~~~--~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ..+. .+.+.......  .    .+.++++++++++|.+++.  ....+++  +++++|++.+.+++..||+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         274 EAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence            1111 22333322211  1    2346778899999998543  3344577  99999999999988889999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.2e-31  Score=229.72  Aligned_cols=250  Identities=26%  Similarity=0.334  Sum_probs=205.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|++.+                            ..|+|++|+.+++..++++|++
T Consensus        61 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~  112 (324)
T cd08292          61 IGGSEAVGVVDAVGEGVKGLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDG  112 (324)
T ss_pred             CCCcceEEEEEEeCCCCCCCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCC
Confidence            589999999999999999999999999631                            2589999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.++ .+.++|++++.++++++++|||+|+ |.+|++++|+|+.+|+ .++++..++++.+.++.+|.+.++++
T Consensus       113 ~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (324)
T cd08292         113 ISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVST  191 (324)
T ss_pred             CCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcC
Confidence            9999998764 6678888887788999999999987 9999999999999999 56777777777888888998887764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                        ...++.+.++++  +.+.++|++||++|+ .....++++++++|+++.+|... ....++...+..++.++.+.... 
T Consensus       192 --~~~~~~~~i~~~--~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08292         192 --EQPGWQDKVREA--AGGAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR  266 (324)
T ss_pred             --CCchHHHHHHHH--hCCCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence              345676667665  356789999999998 57789999999999999998643 22334444466788888876543 


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          238 ----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       238 ----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                                ...++++++++++|.+++  .+.+.|++  +++.+|++.+.+++..+|+++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         267 WSQEMSVEYRKRMIAELLTLALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence                      236888999999999853  34567888  9999999999888788898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.2e-31  Score=229.62  Aligned_cols=245  Identities=21%  Similarity=0.265  Sum_probs=196.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEEC--
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL--   78 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~--   78 (290)
                      .|+|.|++|+|+++|+   .|++||+|+..                               ++|++|+.++.+++.++  
T Consensus        59 ~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------------------------------~~~~~~~~~~~~~~~~l~~  104 (325)
T TIGR02825        59 TMMGQQVARVVESKNV---ALPKGTIVLAS-------------------------------PGWTSHSISDGKDLEKLLT  104 (325)
T ss_pred             cEecceEEEEEEeCCC---CCCCCCEEEEe-------------------------------cCceeeEEechhheEEccc
Confidence            3789999999999874   59999999852                               46899999999988877  


Q ss_pred             --CCCCChhhh-hhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 022879           79 --PDNVSLEEG-AMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  152 (290)
Q Consensus        79 --P~~~~~~~a-a~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg  152 (290)
                        |+++++++| +.+ .++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|
T Consensus       105 ~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lG  183 (325)
T TIGR02825       105 EWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLG  183 (325)
T ss_pred             cccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence              899999887 445 57899999974 488999999999986 9999999999999999 5888888999999999999


Q ss_pred             CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-----Ccc--ccchhhh
Q 022879          153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMT--VPLTPAA  225 (290)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~  225 (290)
                      ++.+++++. ..++.+.+++.   .++++|++||++|+ ..+..++++++++|+++.+|....     ...  .....++
T Consensus       184 a~~vi~~~~-~~~~~~~~~~~---~~~gvdvv~d~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  258 (325)
T TIGR02825       184 FDVAFNYKT-VKSLEETLKKA---SPDGYDCYFDNVGG-EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVI  258 (325)
T ss_pred             CCEEEeccc-cccHHHHHHHh---CCCCeEEEEECCCH-HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHh
Confidence            999887542 12444444443   34689999999997 577899999999999999985431     111  1223456


Q ss_pred             ccCcEEEEeeec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          226 VREVDVVGVFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       226 ~~~~~i~~~~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ++.+++.+....       .+.++++++++++|++++.  +...|++  +++.+|++.+++++..||+|++
T Consensus       259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       259 YQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGF--ENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             hhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence            778888876532       3468889999999999543  4455677  9999999999999889999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=6.4e-31  Score=225.73  Aligned_cols=271  Identities=25%  Similarity=0.393  Sum_probs=221.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|+|++|+|+++|+++++|++||+|++.+- ..|++|++|..+..++|++....+. ...|+|++|+.+++++++++|+
T Consensus        56 ~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~  134 (330)
T cd08245          56 VPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPD  134 (330)
T ss_pred             ccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCC
Confidence            6899999999999999999999999987443 4699999999999999999766553 3579999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      ++++.+++.+ ..+.+||++++...++++++|||+|+|.+|++++++++.+|. .++++.+++++.++++++|++.+++.
T Consensus       135 ~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  213 (330)
T cd08245         135 GLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDS  213 (330)
T ss_pred             CCCHHHhhhhhhhHHHHHHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEecc
Confidence            9999999866 577889998877788999999999888899999999999999 58888899999999999998877763


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      .  ..+....       ..+++|++||+++.......++++++++|+++.++..... .......++.++.++.+.... 
T Consensus       214 ~--~~~~~~~-------~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (330)
T cd08245         214 G--AELDEQA-------AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG  284 (330)
T ss_pred             C--CcchHHh-------ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC
Confidence            2  2222111       1247999999988767888999999999999999854322 122233466677788777655 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ...+++++++++++.+.+   ..+.+++  ++++++++.+.+++..+|+|+
T Consensus       285 ~~~~~~~~~ll~~~~l~~---~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         285 RADLQEALDFAAEGKVKP---MIETFPL--DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHHHHHcCCCcc---eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence            567888999999998843   3356777  999999999999888888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=4.2e-31  Score=227.49  Aligned_cols=248  Identities=19%  Similarity=0.197  Sum_probs=197.3

Q ss_pred             ccccce--eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecC-CceEEC
Q 022879            2 VIGHEC--AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKL   78 (290)
Q Consensus         2 i~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~   78 (290)
                      ++|+++  .|.+..+|+++++|++||+|+.                               .|+|+||+++++ ..++++
T Consensus        70 ~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~-------------------------------~g~~aey~~v~~~~~~~~l  118 (338)
T cd08295          70 KPGEVITGYGVAKVVDSGNPDFKVGDLVWG-------------------------------FTGWEEYSLIPRGQDLRKI  118 (338)
T ss_pred             CCCCeEeccEEEEEEecCCCCCCCCCEEEe-------------------------------cCCceeEEEecchhceeec
Confidence            577654  4566668888999999999984                               268999999999 799999


Q ss_pred             C-CCCChh-hhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cC
Q 022879           79 P-DNVSLE-EGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IG  152 (290)
Q Consensus        79 P-~~~~~~-~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg  152 (290)
                      | +++++. +++.+ .++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|
T Consensus       119 p~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lG  197 (338)
T cd08295         119 DHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLG  197 (338)
T ss_pred             CCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Confidence            6 578876 56655 588899999854 78999999999987 9999999999999999 58888889999999988 99


Q ss_pred             CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-c-----cccchhhhc
Q 022879          153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPAAV  226 (290)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~  226 (290)
                      ++.++++.. ..++.+.+++.   .++++|++||++|+ ..+..++++++++|+++.+|..... .     ..+...+.+
T Consensus       198 a~~vi~~~~-~~~~~~~i~~~---~~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  272 (338)
T cd08295         198 FDDAFNYKE-EPDLDAALKRY---FPNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIY  272 (338)
T ss_pred             CceeEEcCC-cccHHHHHHHh---CCCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhh
Confidence            998887532 23666666554   24689999999997 6889999999999999999854321 1     123345667


Q ss_pred             cCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          227 REVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       227 ~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +++++.+....      .+.++++++++++|.+++.  +...|++  +++.+|++.+.+++..||+|+++
T Consensus       273 ~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         273 KRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGL--ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             ccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence            88888875432      2347889999999998543  4445677  99999999999988899999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-31  Score=224.78  Aligned_cols=243  Identities=38%  Similarity=0.665  Sum_probs=204.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|+|++|+|+++|++++.|++||+|++.+. .+|+.|++|..+..+.|++.+.++ ....|+|++|+.+++..++++|+
T Consensus        58 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~  136 (306)
T cd08258          58 VLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPE  136 (306)
T ss_pred             eeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcC
Confidence            5799999999999999999999999999775 689999999999999998765544 34579999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++.+++.+..+.++|+++.. ++++++++|||.|+|.+|++++++|+.+|++ ++++  ++++++.++++++|++.+ 
T Consensus       137 ~~~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-  214 (306)
T cd08258         137 NLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-  214 (306)
T ss_pred             CCCHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-
Confidence            9999988866688889998754 7889999999988899999999999999995 5554  445668888899998776 


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~  236 (290)
                      ++  ...++...+.++.  .+.++|++||++|+...+...++.|+++|+++.+|... ....++...++++++++.|++.
T Consensus       215 ~~--~~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  290 (306)
T cd08258         215 NG--GEEDLAELVNEIT--DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRS  290 (306)
T ss_pred             CC--CcCCHHHHHHHHc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEec
Confidence            53  3456766666553  45689999999987678889999999999999999754 2345566677889999999998


Q ss_pred             c-CCcHHHHHHHHHcC
Q 022879          237 Y-KNTWPLCLELLRSG  251 (290)
Q Consensus       237 ~-~~~l~~~~~~~~~g  251 (290)
                      + +++++++++++++|
T Consensus       291 ~~~~~~~~~~~~~~~~  306 (306)
T cd08258         291 STPASWETALRLLASG  306 (306)
T ss_pred             CchHhHHHHHHHHhcC
Confidence            7 77899999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=4.7e-31  Score=226.46  Aligned_cols=244  Identities=20%  Similarity=0.281  Sum_probs=195.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC---ceEEC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKL   78 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~---~~~~~   78 (290)
                      ++|+|++|+|++   .+++|++||+|+..                               ++|++|+.++++   .++++
T Consensus        62 v~G~e~~G~V~~---~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~i  107 (329)
T cd08294          62 MIGTQVAKVIES---KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKL  107 (329)
T ss_pred             EecceEEEEEec---CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEEC
Confidence            679999999985   45679999999852                               578999999999   99999


Q ss_pred             CCCCCh------hhhhhhhhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879           79 PDNVSL------EEGAMCEPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus        79 P~~~~~------~~aa~~~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      |+++++      ..++...++.|||+++. ..++++|+++||+|+ |++|++++|+|+.+|+ .++++++++++.+++++
T Consensus       108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~  186 (329)
T cd08294         108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE  186 (329)
T ss_pred             CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence            999882      22323358889999985 488999999999986 9999999999999999 58888899999999999


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Cc----cccchh
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EM----TVPLTP  223 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~~~~  223 (290)
                      +|++.+++++  .+++.+.++++   .+.++|++||++|+ ..+..++++++++|+++.+|....   ..    ......
T Consensus       187 ~Ga~~vi~~~--~~~~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  260 (329)
T cd08294         187 LGFDAVFNYK--TVSLEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQET  260 (329)
T ss_pred             cCCCEEEeCC--CccHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHH
Confidence            9999988753  45777776654   24689999999997 688999999999999999985321   10    112234


Q ss_pred             hhccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          224 AAVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       224 ~~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++++.+++.+....      .+.++++++++++|.+++.  ....+++  +++++|++.+.+++..||+|+++
T Consensus       261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         261 IIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            66788888876532      2347788999999998544  3345677  99999999999998899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=3.5e-31  Score=209.52  Aligned_cols=251  Identities=20%  Similarity=0.308  Sum_probs=196.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      |-|+|++|+|+.+|+++++|++||+|....                           ...|+|++|.+.+++.++++++.
T Consensus        80 VgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~  132 (354)
T KOG0025|consen   80 VGGNEGVGEVVAVGSNVKGFKPGDWVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKD  132 (354)
T ss_pred             ccCCcceEEEEEecCCcCccCCCCeEeecC---------------------------CCCccceeeEeecccceEEcCCc
Confidence            569999999999999999999999999743                           24599999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~~~lg~~~  155 (290)
                      ++.+.||++. ..+|||.++.. .++.+|++|.-.|+ +++|++.+|+|+++|++.+-++...+.   -.+.++.||+++
T Consensus       133 ~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~  212 (354)
T KOG0025|consen  133 IPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATE  212 (354)
T ss_pred             CChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCce
Confidence            9999999884 88999999977 78999999888888 999999999999999976555533332   233456799999


Q ss_pred             EEecCCCcccHH-HHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec-cCCCCccccchhhhccCcEEEE
Q 022879          156 IVKVSTNLQDIA-EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVG  233 (290)
Q Consensus       156 ~~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~i~~  233 (290)
                      ++.-    +.+. ...++. ......+.+.|||+|+ .....+.+.|..+|+++.+| ++..+..++...++++.+.+.|
T Consensus       213 ViTe----eel~~~~~~k~-~~~~~~prLalNcVGG-ksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rG  286 (354)
T KOG0025|consen  213 VITE----EELRDRKMKKF-KGDNPRPRLALNCVGG-KSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRG  286 (354)
T ss_pred             EecH----HHhcchhhhhh-hccCCCceEEEeccCc-hhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeee
Confidence            9751    1111 111111 1134578999999998 46678889999999999998 5667888999999999999999


Q ss_pred             eeec------------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEe
Q 022879          234 VFRY------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  289 (290)
Q Consensus       234 ~~~~------------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~  289 (290)
                      .|..            .+.+.++.+++++|+++..  -.+..++  ++.+.|++...+. ...+|-++.
T Consensus       287 fWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  287 FWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPL--ADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             eeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence            9864            2456789999999999433  3344577  8888888764433 333555543

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.6e-30  Score=218.63  Aligned_cols=250  Identities=29%  Similarity=0.448  Sum_probs=204.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++.+++||+|+..                             ..|+|++|+.+++++++++|++
T Consensus        54 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~  104 (312)
T cd08269          54 GPGHEGWGRVVALGPGVRGLAVGDRVAGL-----------------------------SGGAFAEYDLADADHAVPLPSL  104 (312)
T ss_pred             ccceeeEEEEEEECCCCcCCCCCCEEEEe-----------------------------cCCcceeeEEEchhheEECCCc
Confidence            57999999999999999999999999963                             2488999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +  ..++.. .++++++++++.++++++++++|+|+|.+|++++++|+.+|++.++++++++++.++++.+|++.+++  
T Consensus       105 ~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~--  180 (312)
T cd08269         105 L--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVT--  180 (312)
T ss_pred             h--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEec--
Confidence            8  233333 57788998888788899999999988999999999999999964888888888999999999987775  


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec--
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY--  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~--  237 (290)
                      ....++...+.++.  .+.++|+++||+|....+...+++++++|+++.+|... ....++.....++.+++.+....  
T Consensus       181 ~~~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (312)
T cd08269         181 DDSEAIVERVRELT--GGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDP  258 (312)
T ss_pred             CCCcCHHHHHHHHc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCc
Confidence            33456767776653  45689999999987678889999999999999998543 22334444567788887776533  


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEE
Q 022879          238 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMF  288 (290)
Q Consensus       238 ---~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl  288 (290)
                         .+.+++++++++++.+.+...+.+.+++  ++++++++.+.+++. .+|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         259 RIGLEGMREAVKLIADGRLDLGSLLTHEFPL--EELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             cchhhHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence               3679999999999998543345667788  999999999988844 689886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=7.4e-30  Score=218.50  Aligned_cols=253  Identities=26%  Similarity=0.333  Sum_probs=205.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++.+++||+|++...                          ...|+|++|+.++.++++++|++
T Consensus        62 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08244          62 VPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDG  115 (324)
T ss_pred             CCccceEEEEEEeCCCCCCCCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCC
Confidence            5799999999999999999999999997421                          13689999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ ..+.|||..++.++++++++++|+|+ |.+|++++++|+.+|+ .++++++++++.+.++.+|++.++++
T Consensus       116 ~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  194 (324)
T cd08244         116 LDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDY  194 (324)
T ss_pred             CCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEec
Confidence            999999866 47778865566688999999999986 9999999999999999 58888888999999999998887764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                        ...++.+.+.+.  ..+.++|+++|++|+. .....+++++++|+++.+|..... ..++...++.+++.+.+.... 
T Consensus       195 --~~~~~~~~~~~~--~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (324)
T cd08244         195 --TRPDWPDQVREA--LGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQ  269 (324)
T ss_pred             --CCccHHHHHHHH--cCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeeccc
Confidence              334565665544  2456899999999974 668899999999999999864322 233434456777777766443 


Q ss_pred             ------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                            .+.++++++++.++.+.  +.+...+++  +++.+|++.+.+++..+|+++++
T Consensus       270 ~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         270 AERGGLRALEARALAEAAAGRLV--PVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCcc--CccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                  34677889999999883  446677888  99999999999988899999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.98  E-value=1.7e-29  Score=217.44  Aligned_cols=251  Identities=19%  Similarity=0.302  Sum_probs=195.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++++|++||+|+....                         ....|+|++|+.++++.++++|++
T Consensus        61 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~  115 (336)
T TIGR02817        61 ILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD-------------------------IDRPGSNAEFHLVDERIVGHKPKS  115 (336)
T ss_pred             ccceeeEEEEEEeCCCCCCCCCCCEEEEcCC-------------------------CCCCCcccceEEEcHHHcccCCCC
Confidence            6899999999999999999999999986310                         123599999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCC-----CCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcC
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGP-----ETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIG  152 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~-----~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg  152 (290)
                      +++++++.++ .+.|||+++.. .++++     +++|||+|+ |++|++++|+|+.+ |+ .++++.+++++.++++++|
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g  194 (336)
T TIGR02817       116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG  194 (336)
T ss_pred             CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence            9999998774 77889999844 66766     999999987 99999999999998 99 5888888889999999999


Q ss_pred             CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879          153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  232 (290)
                      ++++++++   .++...++++   .++++|+++|++++.......+++++++|+++.++..   ..++...+..+++.+.
T Consensus       195 ~~~~~~~~---~~~~~~i~~~---~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~  265 (336)
T TIGR02817       195 AHHVIDHS---KPLKAQLEKL---GLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLH  265 (336)
T ss_pred             CCEEEECC---CCHHHHHHHh---cCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEE
Confidence            99888743   2566666552   4568999999987667889999999999999988532   1233333333444444


Q ss_pred             Eeeec-------------CCcHHHHHHHHHcCCCCCCCceeeEee-CChhhHHHHHHHHhcCCCceeEEEe
Q 022879          233 GVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       233 ~~~~~-------------~~~l~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      +....             ...+++++++++++.++  +.+.+.++ ++++++++|++.+.+++..+|+++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             EEEeecccccchhhhhhhHHHHHHHHHHHHCCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            32111             14578899999999884  33334444 2348999999999998888998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=4.4e-29  Score=214.72  Aligned_cols=273  Identities=26%  Similarity=0.363  Sum_probs=217.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|+++++|++||+|++.....|+.+.      .+.|..+...+ ...+|+|++|+.++.++++++|++
T Consensus        60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~------~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~  132 (336)
T cd08276          60 IPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGP------PTAEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDH  132 (336)
T ss_pred             ccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccc------ccccccccccc-cccCceeeeEEEecHHHeEECCCC
Confidence            68999999999999999999999999987655444333      23443332232 235799999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ ..+.+||+++.. ..++++++++|+|+|++|+++++++++.|+ .+++++.++++.+.++++|.+.+++.
T Consensus       133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  211 (336)
T cd08276         133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY  211 (336)
T ss_pred             CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence            999888877 478889998865 788999999999889999999999999999 58888889999999988998888764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      .. ..++...++++.  .++++|++||+++. .....++++++++|+++.+|..... .......++.+++++.+.... 
T Consensus       212 ~~-~~~~~~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T cd08276         212 RT-TPDWGEEVLKLT--GGRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS  287 (336)
T ss_pred             Cc-ccCHHHHHHHHc--CCCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc
Confidence            32 155666666552  45689999999985 6788999999999999999865432 233444567788888887654 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...+++++++++++.+.  +.....+++  ++++++++.+.+++..+|+++++
T Consensus       288 ~~~~~~~~~l~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         288 RAQFEAMNRAIEAHRIR--PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHHHHHHHHHHcCCcc--cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            56788999999988773  334567788  99999999999888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-29  Score=215.79  Aligned_cols=251  Identities=22%  Similarity=0.351  Sum_probs=202.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++.+++||+|+..                            ..+|+|++|++++.++++++|++
T Consensus        61 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~  112 (334)
T PTZ00354         61 ILGLEVAGYVEDVGSDVKRFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQG  112 (334)
T ss_pred             ccceeeEEEEEEeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCC
Confidence            68999999999999999999999999863                            12589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.+|++++.. ..++++++++|+|+ |++|++++++|+++|++ ++.+.+++++.++++++|.+.+++
T Consensus       113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~  191 (334)
T PTZ00354        113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIR  191 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEe
Confidence            999888866 578889999865 78899999999986 99999999999999995 556778889999999999988776


Q ss_pred             cCCCccc-HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-cc-ccchhhhccCcEEEEee
Q 022879          159 VSTNLQD-IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVF  235 (290)
Q Consensus       159 ~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~  235 (290)
                      ..  ..+ +.+.++++.  .+.++|++||++|+ ..+..++++++++|+++.++..... .. ++...+..+..++.+..
T Consensus       192 ~~--~~~~~~~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (334)
T PTZ00354        192 YP--DEEGFAPKVKKLT--GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFST  266 (334)
T ss_pred             cC--ChhHHHHHHHHHh--CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeee
Confidence            43  223 555665542  45689999999986 6889999999999999999854322 12 45455566666777754


Q ss_pred             ecC-----------CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          236 RYK-----------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       236 ~~~-----------~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...           +.+++++++++++.+.  +.+.+.+++  ++++++++.+.+++..+|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        267 LRSRSDEYKADLVASFEREVLPYMEEGEIK--PIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence            321           2357788899999884  446677888  99999999999887788999864

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.97  E-value=2.3e-29  Score=217.10  Aligned_cols=253  Identities=24%  Similarity=0.323  Sum_probs=200.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++..|++||+|++...                           ..|+|++|+.++.++++++|++
T Consensus        66 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~  118 (341)
T cd08290          66 VGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPND  118 (341)
T ss_pred             CCCcceEEEEEEeCCCCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCC
Confidence            6899999999999999999999999996321                           2589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHHcCCC
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKEIGAD  154 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~lg~~  154 (290)
                      +++.+++.+ ..+.|+|+++.. ..++++++|||+|+ |++|++++++|+..|++ ++++..++    ++.++++++|++
T Consensus       119 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~  197 (341)
T cd08290         119 VDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGAD  197 (341)
T ss_pred             CCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCC
Confidence            999999877 478899999865 67899999999987 99999999999999995 55555554    677888899999


Q ss_pred             EEEecCCC-cccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEE
Q 022879          155 NIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       155 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~  232 (290)
                      .+++++.. ..++...++++.  .+ ++|++||++|+ ......+++++++|+++.+|... ....++...++.+++++.
T Consensus       198 ~~~~~~~~~~~~~~~~i~~~~--~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  273 (341)
T cd08290         198 HVLTEEELRSLLATELLKSAP--GG-RPKLALNCVGG-KSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLR  273 (341)
T ss_pred             EEEeCcccccccHHHHHHHHc--CC-CceEEEECcCc-HhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEE
Confidence            88874321 014555555442  23 79999999997 46778899999999999998533 222344445577888888


Q ss_pred             Eeeec-----------CCcHHHHHHHHHcCCCCCCCceeeEe---eCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          233 GVFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~-----------~~~l~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +....           ...++.+++++.++.+.+.  ....+   ++  ++++++++.+.+++..+|+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         274 GFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             EEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence            86543           1257889999999988543  33455   67  99999999999888889999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2.1e-29  Score=210.12  Aligned_cols=235  Identities=36%  Similarity=0.627  Sum_probs=194.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++++|++||+|+..+..+|++|++|..    .|+.....+ ....|+|++|+.++.+.++++|++
T Consensus        32 ~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~  106 (271)
T cd05188          32 ILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGILG-EGLDGGFAEYVVVPADNLVPLPDG  106 (271)
T ss_pred             ccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCEec-cccCCcceEEEEechHHeEECCCC
Confidence            579999999999999999999999999999999999999997    677665544 356799999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ .++.+|++++.. ..++++++|||+|+|++|++++++++..|. .++++++++++.+.++.++.+.+++.
T Consensus       107 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  185 (271)
T cd05188         107 LSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDY  185 (271)
T ss_pred             CCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccC
Confidence            999999987 689999999876 455899999999985599999999999998 68888899999999999998877663


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcccc-chhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-  237 (290)
                        ...++.+.+.   ...+.++|++||+++........++.++++|+++.++......... ....+.+++++.+...+ 
T Consensus       186 --~~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         186 --KEEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             --CcCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC
Confidence              3344544444   2356789999999997567888999999999999998654332222 34467788999888766 


Q ss_pred             CCcHHHHHHH
Q 022879          238 KNTWPLCLEL  247 (290)
Q Consensus       238 ~~~l~~~~~~  247 (290)
                      ..++++++++
T Consensus       261 ~~~~~~~~~~  270 (271)
T cd05188         261 REDFEEALDL  270 (271)
T ss_pred             HHHHHHHHhh
Confidence            4567777665

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.97  E-value=4.6e-29  Score=213.55  Aligned_cols=250  Identities=25%  Similarity=0.372  Sum_probs=203.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.+++||+|++.+                            .+|+|++|+.++...++++|++
T Consensus        59 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~lp~~  110 (323)
T cd05282          59 VPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----------------------------GEGTWQEYVVAPADDLIPVPDS  110 (323)
T ss_pred             cCCcceEEEEEEeCCCCCCCCCCCEEEEeC----------------------------CCCcceeEEecCHHHeEECCCC
Confidence            679999999999999999999999999642                            1589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++|+++.. ..+.+++++||+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|++.+++
T Consensus       111 ~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  189 (323)
T cd05282         111 ISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVID  189 (323)
T ss_pred             CCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEec
Confidence            999888866 477788888755 67889999999987 9999999999999999 4777778888889889999988877


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +.  ..++...+.+.  +.+.++|++||++|+ ......+++++++|+++.+|..... ..++...+..+++++.+....
T Consensus       190 ~~--~~~~~~~~~~~--~~~~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (323)
T cd05282         190 SS--PEDLAQRVKEA--TGGAGARLALDAVGG-ESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLR  264 (323)
T ss_pred             cc--chhHHHHHHHH--hcCCCceEEEECCCC-HHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEeh
Confidence            43  34555555544  356789999999998 4567889999999999999865432 234444444478887776543


Q ss_pred             -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                                 .+.++++++++.++.+.  +...+.+++  +++.+|++.+.+++..+|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         265 QWLHSATKEAKQETFAEVIKLVEAGVLT--TPVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HhhccCCHHHHHHHHHHHHHHHhCCCcc--cCccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence                       24588899999999884  345677888  9999999999988888899874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=4.6e-30  Score=217.81  Aligned_cols=222  Identities=27%  Similarity=0.458  Sum_probs=173.3

Q ss_pred             CCCCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHHh-c------CCCCCCeEEEECC-CHHHHHHHHHHH
Q 022879           58 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-A------NIGPETNVLIMGA-GPIGLVTMLAAR  128 (290)
Q Consensus        58 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~------~~~~~~~vlI~Ga-g~vG~~ai~la~  128 (290)
                      ....|+|+||+++++..++++|+++++.+||.++ .+.|||.++.. .      +.++|++|||+|+ |++|++++|+|+
T Consensus       100 ~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk  179 (347)
T KOG1198|consen  100 FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAK  179 (347)
T ss_pred             ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHH
Confidence            3467999999999999999999999999999885 88899999866 6      7999999999976 999999999999


Q ss_pred             HCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEE
Q 022879          129 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC  208 (290)
Q Consensus       129 ~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  208 (290)
                      +.|+ ..+++.+++++.++++++|++.+++|+.  +++.+.+++.   .+++||+||||+|++ .......++...|+..
T Consensus       180 ~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~  252 (347)
T KOG1198|consen  180 HAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGA  252 (347)
T ss_pred             hcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cCCCccEEEECCCCC-ccccchhhhccCCceE
Confidence            9996 4566669999999999999999999764  6776666554   267999999999984 6677778888777655


Q ss_pred             EeccCC---CCcccc-chh-h--------hccCcEEEEee--ecCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHH
Q 022879          209 LVGMGH---HEMTVP-LTP-A--------AVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA  273 (290)
Q Consensus       209 ~~g~~~---~~~~~~-~~~-~--------~~~~~~i~~~~--~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a  273 (290)
                      .++...   .....+ ..+ +        ..+........  ...+.++.+.+++++|++  ++.+.+.|++  +++.+|
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~--~~~~ea  328 (347)
T KOG1198|consen  253 YIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPF--SQAKEA  328 (347)
T ss_pred             EEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeH--HHHHHH
Confidence            444322   111111 110 0        01111111111  116789999999999977  8889999999  999999


Q ss_pred             HHHHhcCCCceeEEEeC
Q 022879          274 FETSARGGTAIKVMFNL  290 (290)
Q Consensus       274 ~~~~~~~~~~gk~vl~~  290 (290)
                      ++++.++...||+++.+
T Consensus       329 ~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  329 FEKLEKSHATGKVVLEK  345 (347)
T ss_pred             HHHHhhcCCcceEEEEe
Confidence            99999998999999864

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=6.7e-29  Score=210.87  Aligned_cols=242  Identities=26%  Similarity=0.316  Sum_probs=197.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++++|++||+|+..                            ..+|+|++|+.+++++++++|++
T Consensus        54 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~  105 (305)
T cd08270          54 VPGWDAAGVVERAAADGSGPAVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDG  105 (305)
T ss_pred             cccceeEEEEEEeCCCCCCCCCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCC
Confidence            57999999999999999999999999863                            12589999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.++ .+.+||+++......++++++|+|+ |++|++++++++.+|+ .++.+++++++.+.++++|++..+..
T Consensus       106 ~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  184 (305)
T cd08270         106 VSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG  184 (305)
T ss_pred             CCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            9999998774 7789999987644446999999988 9999999999999999 58888888999999999998765431


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Cccccchhhhc--cCcEEEEeee
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAV--REVDVVGVFR  236 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--~~~~i~~~~~  236 (290)
                      .   .       ++   .++++|+++|++|+ ..+...+++++++|+++.+|.... ...++...+..  ++.++.+...
T Consensus       185 ~---~-------~~---~~~~~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
T cd08270         185 G---S-------EL---SGAPVDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFL  250 (305)
T ss_pred             c---c-------cc---cCCCceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEc
Confidence            1   1       11   12479999999997 578899999999999999986432 22344444443  5777777654


Q ss_pred             c-----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 Y-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~-----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .     .+.++.++++++++++.  +.+.+.+++  +++++|++.+.+++..+|+|++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         251 YDGEPLAADLARLLGLVAAGRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            3     45688899999999995  335667788  99999999999888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=7.2e-29  Score=207.87  Aligned_cols=241  Identities=29%  Similarity=0.408  Sum_probs=191.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      .++|+|++|+|+++|+++++|++||+|+..                               ++|++|+.+++++++++|+
T Consensus        22 ~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~~ip~   70 (277)
T cd08255          22 LPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLLVPLPD   70 (277)
T ss_pred             cccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHeeECcC
Confidence            378999999999999999999999999863                               4689999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEec
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKV  159 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~  159 (290)
                      ++++.+++.+..+.+||+++...++++++++||+|+|.+|++++++|+.+|+++++++++++++.++++++| .+.++..
T Consensus        71 ~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~  150 (277)
T cd08255          71 GLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAAD  150 (277)
T ss_pred             CCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCcccccc
Confidence            999988887777888999987788999999999988999999999999999955888989999999999998 4544332


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec--
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  237 (290)
                      .   .       ..  ..++++|++||+++........+++++++|+++.+|............+..+.+++.+....  
T Consensus       151 ~---~-------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (277)
T cd08255         151 T---A-------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGI  218 (277)
T ss_pred             c---h-------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeeccccc
Confidence            1   0       01  13568999999998777888999999999999999864432111112233444455544321  


Q ss_pred             -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEE
Q 022879          238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF  288 (290)
Q Consensus       238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl  288 (290)
                                 .+.+++++++++++.+  .+.+.+.+++  +++.+|++.+.++ ....|+++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         219 GRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             ccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence                       2578999999999987  4445667778  9999999998876 45667764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.97  E-value=1.4e-28  Score=211.04  Aligned_cols=253  Identities=26%  Similarity=0.328  Sum_probs=198.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.+++||+|+...                           ...|+|++|+.++.++++++|++
T Consensus        60 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~  112 (327)
T PRK10754         60 GLGTEAAGVVSKVGSGVKHIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDA  112 (327)
T ss_pred             ccCcceEEEEEEeCCCCCCCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCC
Confidence            579999999999999999999999998521                           13589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++++++.. ..++++++++|+|+ |.+|++++++++.+|+ .+++++.++++.++++++|.+.+++
T Consensus       113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T PRK10754        113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN  191 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence            999988865 467788888755 78899999999976 9999999999999999 5788888999999999999888776


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccC------cEE
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVRE------VDV  231 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~i  231 (290)
                      .  ...++.+.++++.  .++++|++|||+|+ ......+++++++|+++.+|..... ..++...+..+.      ..+
T Consensus       192 ~--~~~~~~~~~~~~~--~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (327)
T PRK10754        192 Y--REENIVERVKEIT--GGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSL  266 (327)
T ss_pred             C--CCCcHHHHHHHHc--CCCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEeccee
Confidence            3  3456666666653  56789999999996 6788899999999999999865422 122222222111      111


Q ss_pred             EEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          232 VGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       232 ~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .+....    .+.++.+++++.+|.+.+.....+.|++  +++.++++.+.+++..+|+|+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            121111    2345668899999998644444567888  9999999999999889999985

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=1e-28  Score=197.44  Aligned_cols=233  Identities=18%  Similarity=0.197  Sum_probs=193.0

Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCCChhhhh--hh-hh
Q 022879           16 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC-EP   92 (290)
Q Consensus        16 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa--~~-~~   92 (290)
                      ++.+.|++||.|...                               .+|+||..++.+.+.++++..-+..+.  .+ ++
T Consensus        86 S~~~~f~~GD~V~~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmp  134 (340)
T COG2130          86 SNHPGFQPGDIVVGV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMP  134 (340)
T ss_pred             cCCCCCCCCCEEEec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCc
Confidence            667889999999853                               589999999999999998665444443  33 68


Q ss_pred             hHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHH
Q 022879           93 LSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEE  169 (290)
Q Consensus        93 ~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~  169 (290)
                      ..|||.+|.. +++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.+..+||.  .+++.+.
T Consensus       135 G~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~~~~  211 (340)
T COG2130         135 GLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDFAQA  211 (340)
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccHHHH
Confidence            8899999855 89999999999987 9999999999999999 69999999999999987 9999999965  4688888


Q ss_pred             HHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Ccccc-----chhhhccCcEEEEeeec-----
Q 022879          170 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP-----LTPAAVREVDVVGVFRY-----  237 (290)
Q Consensus       170 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~-----~~~~~~~~~~i~~~~~~-----  237 (290)
                      +++.   -.+++|+.||++|+ +.++..+..|+.++|++.+|.-+.  ....+     +..++.+++++.|+.-.     
T Consensus       212 L~~a---~P~GIDvyfeNVGg-~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~  287 (340)
T COG2130         212 LKEA---CPKGIDVYFENVGG-EVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ  287 (340)
T ss_pred             HHHH---CCCCeEEEEEcCCc-hHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence            7765   56899999999998 799999999999999999996331  11111     22356678899998652     


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 --~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                        .+.++++.+|+.+|+++.+..+  +-++  +++++|+..+.+++.+||+|+++
T Consensus       288 ~~~e~~~~l~~wv~~GKi~~~eti--~dGl--EnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         288 RFPEALRELGGWVKEGKIQYRETI--VDGL--ENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             hhHHHHHHHHHHHHcCceeeEeee--hhhh--hccHHHHHHHhcCCccceEEEEe
Confidence              4678899999999999665533  4467  99999999999999999999975

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=4.2e-28  Score=207.16  Aligned_cols=250  Identities=25%  Similarity=0.352  Sum_probs=196.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|.  ..+++||+|++....-                      +...+|+|++|+.+++.+++++|++
T Consensus        59 ~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~  114 (320)
T cd08243          59 VLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSD  114 (320)
T ss_pred             cccceeEEEEEEecC--CCCCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCC
Confidence            579999999999995  5799999998753210                      0124599999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ .++.+||+++.. ..++++++|||+|+ |++|++++++|+.+|+ .++++..++++.+.++++|++.++.
T Consensus       115 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  193 (320)
T cd08243         115 LSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVI  193 (320)
T ss_pred             CCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEe
Confidence            999988866 588899999865 67899999999987 9999999999999999 5888888899999999999987764


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccc---cchhh--hccCcEEEE
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV---PLTPA--AVREVDVVG  233 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~--~~~~~~i~~  233 (290)
                        . ..++.+.+.++    ++++|+++|++|+ ..+...+++++++|+++.+|........   .....  ..+++.+.+
T Consensus       194 --~-~~~~~~~i~~~----~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T cd08243         194 --D-DGAIAEQLRAA----PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG  265 (320)
T ss_pred             --c-CccHHHHHHHh----CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEe
Confidence              2 33555555544    5689999999997 6888999999999999999864322111   11111  245566655


Q ss_pred             eeec---CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          234 VFRY---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       234 ~~~~---~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ....   ...++.++++++++.++  +...+.+++  +++++|++.+.+++..+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         266 SSSGDVPQTPLQELFDFVAAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             cchhhhhHHHHHHHHHHHHCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence            5432   34578899999999884  335567788  999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.97  E-value=4.4e-28  Score=208.79  Aligned_cols=259  Identities=25%  Similarity=0.333  Sum_probs=196.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.+++||+|+.....+++                    ....+|+|++|+.++.++++++|++
T Consensus        57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~  116 (339)
T cd08249          57 ILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDN  116 (339)
T ss_pred             eeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCC
Confidence            57999999999999999999999999976432211                    1234799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCC----------CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANI----------GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~----------~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      +++.+++.++ .+.++|+++.. .++          .+++++||+|+ |.+|++++++++.+|++ ++++. ++++.+.+
T Consensus       117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~  194 (339)
T cd08249         117 ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLV  194 (339)
T ss_pred             CCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHH
Confidence            9999998775 88899998854 433          78999999997 99999999999999995 66665 45888888


Q ss_pred             HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhcc--CCEEEEeccCCCCccccchhhhc
Q 022879          149 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA--GGKVCLVGMGHHEMTVPLTPAAV  226 (290)
Q Consensus       149 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~  226 (290)
                      +.+|+++++++  ...++.+.++++   .++++|++||++|.+..+..+++++++  +|+++.+|.......+. .....
T Consensus       195 ~~~g~~~v~~~--~~~~~~~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~  268 (339)
T cd08249         195 KSLGADAVFDY--HDPDVVEDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKV  268 (339)
T ss_pred             HhcCCCEEEEC--CCchHHHHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceE
Confidence            99999888874  345666666554   346799999999975688999999999  99999998654321111 11111


Q ss_pred             cCcEEEEeee---c-----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC-CceeEEEeC
Q 022879          227 REVDVVGVFR---Y-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  290 (290)
Q Consensus       227 ~~~~i~~~~~---~-----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~~  290 (290)
                      ..+.......   .     ...++.+.++++++.+.+.  ....+++.++++++|++.+.+++ ..+|+|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         269 KFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             EEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            1111111111   1     3457789999999988554  33345511399999999999988 889999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.97  E-value=8.6e-28  Score=206.25  Aligned_cols=248  Identities=22%  Similarity=0.284  Sum_probs=194.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++++++||+|++.                             ..|+|++|+.++.+.++++|++
T Consensus        63 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~  113 (329)
T cd08250          63 DCGFEGVGEVVAVGEGVTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPEL  113 (329)
T ss_pred             ccCceeEEEEEEECCCCCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCC
Confidence            67999999999999999999999999863                             2589999999999999999997


Q ss_pred             CChhhhhhhhhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      . ...++....+.+||+++.. ..++++++++|+|+ |.+|++++++++..|+ .++++.+++++.+.++.+|++.+++.
T Consensus       114 ~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  191 (329)
T cd08250         114 K-PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINY  191 (329)
T ss_pred             c-chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeC
Confidence            3 2333344688899999865 78899999999986 9999999999999999 47888888888899999998887764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-----------ccccchhhhccC
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-----------MTVPLTPAAVRE  228 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~  228 (290)
                      +  ..++...+.+.   .++++|++||++|+ ..+...+++++++|+++.+|.....           ..++ ...+.++
T Consensus       192 ~--~~~~~~~~~~~---~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~  264 (329)
T cd08250         192 K--TEDLGEVLKKE---YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKS  264 (329)
T ss_pred             C--CccHHHHHHHh---cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcC
Confidence            3  34555555443   34679999999996 7888999999999999999854321           0111 2235567


Q ss_pred             cEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          229 VDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       229 ~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .++.+....      .+.+++++++++++.+.+.....+.+++  +++++|++.+.+++..+|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence            777776432      3457888999999988543323344677  9999999999988888898874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.96  E-value=2.1e-27  Score=203.56  Aligned_cols=254  Identities=19%  Similarity=0.278  Sum_probs=190.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|++.|  +++|++||+|+..+..                     .+ ...+|+|+||+.++++.++++|++
T Consensus        60 ~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~~p~~  115 (326)
T cd08289          60 IPGIDLAGTVVESN--DPRFKPGDEVIVTSYD---------------------LG-VSHHGGYSEYARVPAEWVVPLPKG  115 (326)
T ss_pred             CcccceeEEEEEcC--CCCCCCCCEEEEcccc---------------------cC-CCCCCcceeEEEEcHHHeEECCCC
Confidence            67999999999954  5779999999975320                     11 134699999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh---cCC-CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR---ANI-GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~---~~~-~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +++.+++.++ .+.||+.+++.   ... ..+++|||+|+ |++|++++++|+.+|+ .++++++++++.++++++|++.
T Consensus       116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (326)
T cd08289         116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE  194 (326)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence            9999998774 66678877743   233 34789999988 9999999999999999 5888889999999999999988


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++.+.  . ..+.++++   .+.++|++||++|+ ..+...+++++++|+++.+|.... ....+...++.+++++.+.
T Consensus       195 v~~~~~--~-~~~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~  267 (326)
T cd08289         195 VIPREE--L-QEESIKPL---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGI  267 (326)
T ss_pred             EEcchh--H-HHHHHHhh---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEE
Confidence            876432  1 23334433   34679999999997 688899999999999999996532 2223344566788888886


Q ss_pred             eec---CCcHHHHHHHHHcCCCC---CCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY---KNTWPLCLELLRSGKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~---~~~l~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...   ......+++.+.+ .+.   ....+.+.+++  +++.+|++.+.+++..+|+|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         268 DSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             EeEecCchHHHHHHHHHHh-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence            432   1223333333332 221   12345778888  99999999999998899999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08251 polyketide_synthase polyketide synthase

Probab=99.96  E-value=3.7e-27  Score=199.64  Aligned_cols=251  Identities=25%  Similarity=0.394  Sum_probs=197.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++++++||+|++...                          ..+|+|++|+.++++.++++|++
T Consensus        40 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~~~~~~~~~~p~~   93 (303)
T cd08251          40 TPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------------------------ESMGGHATLVTVPEDQVVRKPAS   93 (303)
T ss_pred             CcCceeeEEEEEECCCCCCCCCCCEEEEecC--------------------------CCCcceeeEEEccHHHeEECCCC
Confidence            6799999999999999999999999987421                          13589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+++.+ ..+.++|++++...++++++++|+|+ +.+|++++++++++|+ .++++.+++++.+.++.+|.+.+++.
T Consensus        94 ~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  172 (303)
T cd08251          94 LSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINY  172 (303)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence            999999877 47889999987788999999999976 9999999999999999 58888888889999999999888764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhh----ccCcEEEE
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAA----VREVDVVG  233 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~----~~~~~i~~  233 (290)
                      .  ..++...+.++.  .++++|+++|++++ ......+++++++|+++.+|.....  ..+....+.    ++.+++.+
T Consensus       173 ~--~~~~~~~i~~~~--~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (303)
T cd08251         173 V--EEDFEEEIMRLT--GGRGVDVVINTLSG-EAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRK  247 (303)
T ss_pred             C--CccHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHH
Confidence            3  346666666543  45689999999985 6788899999999999999854321  122222211    11222211


Q ss_pred             eeec-----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          234 VFRY-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       234 ~~~~-----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ....     .+.+.+++++++++.++  +...+.+++  +++.++++.+.+++..+|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         248 LLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPF--DDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence            1111     34577888999999884  445667888  999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.96  E-value=3.5e-27  Score=202.03  Aligned_cols=252  Identities=21%  Similarity=0.307  Sum_probs=190.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++  +++.|++||+|++.+.                     .. +...+|+|++|+.+++++++++|++
T Consensus        60 ~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~---------------------~~-g~~~~g~~~~~~~v~~~~~~~lp~~  115 (325)
T cd05280          60 TPGIDAAGTVVSS--DDPRFREGDEVLVTGY---------------------DL-GMNTDGGFAEYVRVPADWVVPLPEG  115 (325)
T ss_pred             ccCcccEEEEEEe--CCCCCCCCCEEEEccc---------------------cc-CCCCCceeEEEEEEchhhEEECCCC
Confidence            5799999999999  4668999999997421                     00 1124699999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh---cCCC-CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR---ANIG-PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~---~~~~-~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +++.+++.++ .+.+++.+++.   ..+. .+++|+|+|+ |.+|++++++|+.+|++ ++++++++++.++++++|++.
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~  194 (325)
T cd05280         116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASE  194 (325)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcE
Confidence            9999998774 67788888754   2335 3579999998 99999999999999995 888889999999999999988


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++..    +....+.+.  ..++++|++||++|+ ..+...+++++++|+++.+|.... ...++...++.+++++.+.
T Consensus       195 ~~~~~----~~~~~~~~~--~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T cd05280         195 VLDRE----DLLDESKKP--LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGI  267 (325)
T ss_pred             EEcch----hHHHHHHHH--hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEE
Confidence            87632    111122222  234579999999997 688999999999999999986432 2233444455678887775


Q ss_pred             eec---C----CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY---K----NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~---~----~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...   .    +.++.+.+++.++..   +.+...+++  ++++++++.+.+++..+|+|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         268 DSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             EeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            433   1    223445555555533   336677888  99999999999998899999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.96  E-value=5.7e-27  Score=201.73  Aligned_cols=252  Identities=21%  Similarity=0.298  Sum_probs=197.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++.|++||+|+....                         ...+|+|++|+.++.++++++|++
T Consensus        62 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~  116 (336)
T cd08252          62 ILGWDASGVVEAVGSEVTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKS  116 (336)
T ss_pred             ccccceEEEEEEcCCCCCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCC
Confidence            6899999999999999999999999986311                         124699999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCC-----CCeEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcC
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGP-----ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIG  152 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~-----~~~vlI~Ga-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg  152 (290)
                      +++.+++.++ .+.++|+++.. +.+++     +++|+|+|+ |++|++++++++.+| + .+++++.++++.++++++|
T Consensus       117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g  195 (336)
T cd08252         117 LSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELG  195 (336)
T ss_pred             CCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcC
Confidence            9999888664 66788888744 66766     999999986 999999999999999 7 6888888889999999999


Q ss_pred             CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879          153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  232 (290)
                      .+.+++..   .++...+..   ..++++|++||++|.+..+..++++++++|+++.+|...  ..++...+..++.++.
T Consensus       196 ~~~~~~~~---~~~~~~i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~  267 (336)
T cd08252         196 ADHVINHH---QDLAEQLEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFH  267 (336)
T ss_pred             CcEEEeCC---ccHHHHHHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEE
Confidence            98887643   245555542   234689999999997678899999999999999998543  2334444445666666


Q ss_pred             Eeeec-------------CCcHHHHHHHHHcCCCCCCCc-eeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          233 GVFRY-------------KNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       233 ~~~~~-------------~~~l~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      +....             .+.++++++++.+|.+.+... ....+++  +++.+|++.+.+++..+|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         268 WEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             EEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence            54321             134778999999998843211 1123456  9999999999998888898874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=6.8e-27  Score=199.32  Aligned_cols=251  Identities=26%  Similarity=0.336  Sum_probs=200.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|+++++|++||+|++..                            ..|+|++|+.++++.++++|++
T Consensus        57 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~  108 (320)
T cd05286          57 VLGVEGAGVVEAVGPGVTGFKVGDRVAYAG----------------------------PPGAYAEYRVVPASRLVKLPDG  108 (320)
T ss_pred             cCCcceeEEEEEECCCCCCCCCCCEEEEec----------------------------CCCceeEEEEecHHHceeCCCC
Confidence            689999999999999999999999998631                            2589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ++..+++.+ ..+.++++++.. .++++++++||+|+ |++|++++++++.+|+ .+++++.++++.+.++++|.+.+++
T Consensus       109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  187 (320)
T cd05286         109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVIN  187 (320)
T ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEe
Confidence            999888866 577788888754 78899999999996 9999999999999999 5788888889999999999888776


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      .  ...++.+.+.++  ..+.++|++|||+++ ......+++++++|+++.+|..... ..++...+..+++.+.+....
T Consensus       188 ~--~~~~~~~~~~~~--~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (320)
T cd05286         188 Y--RDEDFVERVREI--TGGRGVDVVYDGVGK-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLF  262 (320)
T ss_pred             C--CchhHHHHHHHH--cCCCCeeEEEECCCc-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehh
Confidence            3  334565566554  245689999999997 6788999999999999999864432 223333333566666543211


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                               .+.+++++++++++.+.+  ...+.|++  +++.++++.+.+++..+|+++.+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         263 HYIATREELLARAAELFDAVASGKLKV--EIGKRYPL--ADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             hhcCCHHHHHHHHHHHHHHHHCCCCcC--cccceEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                     234567888999988743  35567778  99999999999888888998863

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.96  E-value=9.2e-27  Score=199.03  Aligned_cols=256  Identities=29%  Similarity=0.439  Sum_probs=202.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|+++++|++||+|+.....                       .....|++++|+.++++.++++|++
T Consensus        60 ~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~  116 (325)
T cd08253          60 VPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG-----------------------WGRRQGTAAEYVVVPADQLVPLPDG  116 (325)
T ss_pred             ecccceEEEEEeeCCCCCCCCCCCEEEEeccc-----------------------cCCCCcceeeEEEecHHHcEeCCCC
Confidence            67999999999999999999999999975321                       0113689999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ .++.+|++++.. .++.++++++|+|+ +++|++++++++..|. .+++++.++++.+.++.+|.+.+++
T Consensus       117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (325)
T cd08253         117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN  195 (325)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            999998876 588889998865 88899999999987 9999999999999999 5888888889999888899888776


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      .  ...++...+.++.  .++++|+++|++|. ......+++++++|+++.++.......++...++.+...+.+...+ 
T Consensus       196 ~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (325)
T cd08253         196 Y--RAEDLADRILAAT--AGQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYT  270 (325)
T ss_pred             C--CCcCHHHHHHHHc--CCCceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhh
Confidence            4  3345555555542  45689999999997 4678889999999999999864433334444445566666655432 


Q ss_pred             ------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                            .+.++.+.+++.++.+  .+.....+++  ++++++++.+.++...+|+++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         271 ATPEERAAAAEAIAAGLADGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence                  2346667778888877  3445667788  99999999999888889999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.96  E-value=1.4e-26  Score=198.16  Aligned_cols=251  Identities=20%  Similarity=0.295  Sum_probs=189.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.  +++..|++||+|++.+..                     . +.+.+|+|++|+.+++++++++|++
T Consensus        59 ~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~  114 (323)
T TIGR02823        59 IPGIDAAGTVVS--SEDPRFREGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEG  114 (323)
T ss_pred             cceeeeEEEEEe--cCCCCCCCCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCC
Confidence            579999999988  567789999999974210                     0 0124699999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh---cCCCCCC-eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR---ANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~---~~~~~~~-~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +++.+++.++ .+.+++.+++.   ..+.+++ +++|+|+ |.+|++++++|+++|++ ++++..++++.++++++|++.
T Consensus       115 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~  193 (323)
T TIGR02823       115 LSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASE  193 (323)
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcE
Confidence            9999988774 66777766643   4578898 9999998 99999999999999995 666667777778889999988


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++..  +.+  ..++.+   ...++|+++|++|+ ..+...+++++++|+++.+|.... ....+...++.+++++.+.
T Consensus       194 ~~~~~--~~~--~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  265 (323)
T TIGR02823       194 VIDRE--DLS--PPGKPL---EKERWAGAVDTVGG-HTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGI  265 (323)
T ss_pred             EEccc--cHH--HHHHHh---cCCCceEEEECccH-HHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEE
Confidence            77632  112  133333   22359999999996 578899999999999999996532 2223334455778888775


Q ss_pred             eec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...       .+.++.+.+++..+.+.  +. .+.+++  +++++|++.+.+++..+|+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       266 DSVYCPMALREAAWQRLATDLKPRNLE--SI-TREITL--EELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             eccccCchhHHHHHHHHHHHhhcCCCc--Cc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence            432       12355666677777763  33 456777  99999999999998899999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.96  E-value=1.1e-26  Score=201.23  Aligned_cols=260  Identities=21%  Similarity=0.272  Sum_probs=191.5

Q ss_pred             ccccceeEEEEEeCCCCC-CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCC----ceE
Q 022879            2 VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCF   76 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~----~~~   76 (290)
                      ++|+|++|+|+++|++++ +|++||+|++.....                       ....|+|++|+++++.    .++
T Consensus        61 ~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~v~~~~~~~~~~  117 (352)
T cd08247          61 GLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHP-----------------------YGGQGTLSQYLLVDPKKDKKSIT  117 (352)
T ss_pred             ccCceeEEEEEEeCcccccCCCCCCEEEEeecCC-----------------------CCCCceeeEEEEEccccccceeE
Confidence            579999999999999998 899999999753221                       1136899999999988    789


Q ss_pred             ECCCCCChhhhhhh-hhhHHHHHHHHh-c-CCCCCCeEEEECC-CHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc
Q 022879           77 KLPDNVSLEEGAMC-EPLSVGVHACRR-A-NIGPETNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI  151 (290)
Q Consensus        77 ~~P~~~~~~~aa~~-~~~~ta~~~l~~-~-~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l  151 (290)
                      ++|+++++.+++.+ ..+.|+|+++.. . .+++|++++|+|+ +.+|++++++|+.+|. +.++++.+ +++.+.++++
T Consensus       118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~  196 (352)
T cd08247         118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL  196 (352)
T ss_pred             ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence            99999999999877 477789999876 4 6999999999988 8999999999999854 35666654 4555677889


Q ss_pred             CCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhc---cCCEEEEec-cCCCCcc--------
Q 022879          152 GADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC---AGGKVCLVG-MGHHEMT--------  218 (290)
Q Consensus       152 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~~~--------  218 (290)
                      |++.+++.+.... .+...+.+.. ++++++|++|||+|+......++++++   ++|+++.++ .......        
T Consensus       197 g~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~  275 (352)
T cd08247         197 GADHFIDYDAHSGVKLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWD  275 (352)
T ss_pred             CCCEEEecCCCcccchHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhcc
Confidence            9988877433210 0333333322 125689999999998667888999999   999999875 2211100        


Q ss_pred             ---ccc----hhhhccCcEEEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          219 ---VPL----TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       219 ---~~~----~~~~~~~~~i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                         ...    ....+...++......  .+.++++++++.++.+  .+...+.+++  +++++|++.+.+++..+|++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         276 NPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             ccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEe
Confidence               000    1122333343332211  2457889999999988  4446677888  9999999999988888999986


Q ss_pred             C
Q 022879          290 L  290 (290)
Q Consensus       290 ~  290 (290)
                      +
T Consensus       352 ~  352 (352)
T cd08247         352 V  352 (352)
T ss_pred             C
Confidence            4

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.96  E-value=5.6e-27  Score=201.19  Aligned_cols=243  Identities=21%  Similarity=0.208  Sum_probs=192.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecC-CceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~P~   80 (290)
                      ++|+|++|+|+++|++  ++++||+|+..                               ++|++|+.+++ +.++++|+
T Consensus        67 ~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~~~lP~  113 (329)
T cd05288          67 PMRGGGVGEVVESRSP--DFKVGDLVSGF-------------------------------LGWQEYAVVDGASGLRKLDP  113 (329)
T ss_pred             cccCceEEEEEecCCC--CCCCCCEEecc-------------------------------cceEEEEEecchhhcEECCc
Confidence            5689999999999964  79999999852                               58999999999 99999999


Q ss_pred             CCC--hhhhhh-h-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC
Q 022879           81 NVS--LEEGAM-C-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA  153 (290)
Q Consensus        81 ~~~--~~~aa~-~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~  153 (290)
                      +++  +.+++. + ..+.++|+++.. ..+.++++|||+|+ |.+|++++++++..|+ .++++++++++.+.+++ +|+
T Consensus       114 ~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~  192 (329)
T cd05288         114 SLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGF  192 (329)
T ss_pred             ccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCC
Confidence            985  434433 4 588899998865 77889999999986 9999999999999999 58888888999998888 999


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc------ccchhhhcc
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT------VPLTPAAVR  227 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~  227 (290)
                      +.+++++  ..++.+.+.++.   +.++|++||++|+ ..+..++++++++|+++.+|.......      ++....+.+
T Consensus       193 ~~~~~~~--~~~~~~~v~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  266 (329)
T cd05288         193 DAAINYK--TPDLAEALKEAA---PDGIDVYFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITK  266 (329)
T ss_pred             ceEEecC--ChhHHHHHHHhc---cCCceEEEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhC
Confidence            8887743  345666665543   3679999999996 688899999999999999985432211      223345677


Q ss_pred             CcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          228 EVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       228 ~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ++++.+....      .+.+.+++++++++.+++.+.  ..+++  +++.++++.+.+++..+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~l--~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         267 RLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRED--VVEGL--ENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccc--ccccH--HHHHHHHHHHhcCCCccceeC
Confidence            8888776543      245788899999998855433  34667  999999999988877788874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.96  E-value=1.4e-26  Score=197.56  Aligned_cols=249  Identities=27%  Similarity=0.411  Sum_probs=200.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|++++.+++||+|+..                            ..+|+|++|+.+++++++++|++
T Consensus        60 ~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          60 ILGLEVAGVVVAVGPGVTGWKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             cccceeEEEEEeeCCCCCCCCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCC
Confidence            57999999999999999999999999863                            23589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++++++.. ..+.++++++|+|+ |++|++++++++..|+ .+++++.++++.+.++.++.+.+++
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN  190 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            999888866 588889998765 77899999999987 9999999999999999 5888888888888888899877766


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      .  ...++.+.+.+..  .++++|++||++|+ ..+...+++++++|+++.+|.... ...++...++.+++++.+....
T Consensus       191 ~--~~~~~~~~~~~~~--~~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (323)
T cd05276         191 Y--RTEDFAEEVKEAT--GGRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLR  265 (323)
T ss_pred             C--CchhHHHHHHHHh--CCCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeecc
Confidence            3  3345555555442  34679999999997 457888999999999999985432 2233444455678888776533


Q ss_pred             -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                                 ...++++++++.++.+  .+..++.|++  ++++++++.+.+++..+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         266 SRSLEEKAALAAAFREHVWPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             chhhhccHHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence                       1235678888888888  4446677888  999999999988877888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.96  E-value=3.7e-26  Score=195.35  Aligned_cols=251  Identities=25%  Similarity=0.387  Sum_probs=200.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|+++.++++||+|+..                            ..+|+|++|+.++..+++++|++
T Consensus        60 ~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        60 ILGLEVAGEVVAVGEGVSRWKVGDRVCAL----------------------------VAGGGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             CccceeEEEEEEeCCCCCCCCCCCEEEEc----------------------------cCCCcceeEEEecHHHcEeCCCC
Confidence            57999999999999999999999999863                            23489999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++++++. ...++++++++|+|+ |++|++++++++.+|+ .++++..++++.+.++.+|.+.+++
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN  190 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            998888766 58888998864 488999999999987 9999999999999999 5778888888888888899877665


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      .  ...++...+.+..  .+.++|+++|++|. ......+++++++|+++.+|.... ...++...++.+++++.+....
T Consensus       191 ~--~~~~~~~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (325)
T TIGR02824       191 Y--REEDFVEVVKAET--GGKGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLR  265 (325)
T ss_pred             c--CchhHHHHHHHHc--CCCCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehh
Confidence            3  3345555555442  34579999999996 577889999999999999986432 2234444455788888876532


Q ss_pred             -----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                                 ...+.+++++++++.+  .+..++.+++  +++.++++.+.+++..+|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       266 ARPVAEKAAIAAELREHVWPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             hcchhhhHHHHHHHHHHHHHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence                       1234667888888887  3445667788  99999999998887888999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=3.7e-26  Score=191.93  Aligned_cols=247  Identities=28%  Similarity=0.403  Sum_probs=193.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|+++++|++||+|+..                             ..|+|++|+.++.++++++|++
T Consensus        26 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~-----------------------------~~g~~~~~~~~~~~~~~~~p~~   76 (288)
T smart00829       26 VLGGECAGVVTRVGPGVTGLAVGDRVMGL-----------------------------APGSFATYVRTDARLVVPIPDG   76 (288)
T ss_pred             CCCceeEEEEEeeCCCCcCCCCCCEEEEE-----------------------------cCCceeeEEEccHHHeEECCCC
Confidence            68999999999999999999999999863                             2488999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHH-HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--CEE
Q 022879           82 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--DNI  156 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l-~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~  156 (290)
                      +++.+++.++ .+.++++++ +...++++++|+|+|+ |.+|++++++++..|+ .+++++.++++.+.++.+|.  +.+
T Consensus        77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  155 (288)
T smart00829       77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHI  155 (288)
T ss_pred             CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhhe
Confidence            9999998774 777899887 4478899999999986 9999999999999999 58888888999999999997  666


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--CccccchhhhccCcEEEEe
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++  ...++.+.+.+..  .++++|+++|++|+ ......++.++++|+++.+|....  ...++... +.+.+.+.+.
T Consensus       156 ~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~  229 (288)
T smart00829      156 FSS--RDLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAV  229 (288)
T ss_pred             eeC--CCccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEE
Confidence            653  3345666665542  45679999999995 678889999999999999986432  11222222 2344444443


Q ss_pred             eec---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          235 FRY---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       235 ~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ...         .+.+..++++++++.+.+  ...+.|++  ++++++++.+..+...+|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      230 DLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHHHHHHHHHhcCCCcceEeC
Confidence            211         234677888898888743  34466777  999999999988877778764

Enoylreductase in Polyketide synthases.

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=6.9e-26  Score=193.86  Aligned_cols=251  Identities=28%  Similarity=0.386  Sum_probs=196.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|+++.+|++||+|+.....                       .....|+|++|+.+++++++++|++
T Consensus        60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~  116 (326)
T cd08272          60 ILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPAN  116 (326)
T ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCC
Confidence            57999999999999999999999999974210                       0123689999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++..++.++ .+.+||+++. ..+++++++++|+|+ |.+|++++++++.+|++ ++++..+ ++.++++++|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~  194 (326)
T cd08272         117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAAFARSLGADPIIY  194 (326)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHHHHHHcCCCEEEe
Confidence            9998888764 7778998874 488999999999986 99999999999999994 7777677 8888888899887776


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ..  .. +.+.+.++  ..+.++|+++|++++ ......+++++++|+++.++... .  .+......+++.+.+.... 
T Consensus       195 ~~--~~-~~~~~~~~--~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~  265 (326)
T cd08272         195 YR--ET-VVEYVAEH--TGGRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLL  265 (326)
T ss_pred             cc--hh-HHHHHHHh--cCCCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEccc
Confidence            32  23 55555554  245679999999997 57788999999999999998553 1  2222233566666554421 


Q ss_pred             -----------CCcHHHHHHHHHcCCCCCCCcee-eEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -----------KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -----------~~~l~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                                 .+.++.++++++++.+.  +.++ +.+++  +++.++++.+.+++..+|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         266 PLLTGEGRAHHGEILREAARLVERGQLR--PLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             ccccccchhhHHHHHHHHHHHHHCCCcc--cccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence                       34577888899898873  3333 67788  99999999998887789999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.95  E-value=3.5e-26  Score=197.89  Aligned_cols=249  Identities=26%  Similarity=0.322  Sum_probs=188.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|+++++|++||+|++.+..                         ...|+|++|+.+++++++++|++
T Consensus        76 ~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~  130 (350)
T cd08248          76 TLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKN  130 (350)
T ss_pred             eecceeEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCC
Confidence            68999999999999999999999999974321                         13589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCC----CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIG----PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD  154 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~----~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  154 (290)
                      +++.+++.+ ..+.++|+++.. ..+.    ++++++|+|+ |++|++++++++.+|++ ++++.++ ++.+.++++|.+
T Consensus       131 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~  208 (350)
T cd08248         131 LSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGAD  208 (350)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCc
Confidence            999988876 478889998865 5554    4999999986 99999999999999995 6666554 577788999988


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--c--ccc----chhhhc
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--M--TVP----LTPAAV  226 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~--~~~----~~~~~~  226 (290)
                      .+++..  ..++...+.     ..+++|++||++|.+ ....++++++++|+++.+|.....  .  .+.    .....+
T Consensus       209 ~~~~~~--~~~~~~~l~-----~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  280 (350)
T cd08248         209 DVIDYN--NEDFEEELT-----ERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDL  280 (350)
T ss_pred             eEEECC--ChhHHHHHH-----hcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHH
Confidence            777642  234443332     235799999999974 888999999999999999854211  0  110    001111


Q ss_pred             ---------cCcE--EEEeeecCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          227 ---------REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       227 ---------~~~~--i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                               +...  +.........++++++++++|.+  .+.+.+.|++  +++.++++.+.+++..+|++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         281 LKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence                     1111  11111124568899999999987  4446677888  9999999999888778888874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=3e-25  Score=189.94  Aligned_cols=256  Identities=28%  Similarity=0.397  Sum_probs=199.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|+++.+|++||+|+..+...                       ...+|++++|+.++++.++++|++
T Consensus        60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~  116 (328)
T cd08268          60 RLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDG  116 (328)
T ss_pred             CCCcceEEEEEeeCCCCCcCCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCC
Confidence            579999999999999999999999999753211                       124589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++|+++.. ..+.++++++|+|+ |.+|++++++++..|+ .++.++.++++.+.++.+|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (328)
T cd08268         117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV  195 (328)
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            998888766 588899998864 77889999999987 9999999999999999 5777778888888888899877776


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      .+  ..++...+.+..  .+.++|++++++|+ ......+++++++|+++.+|.... ...++....+.+++.+.+....
T Consensus       196 ~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T cd08268         196 TD--EEDLVAEVLRIT--GGKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLD  270 (328)
T ss_pred             cC--CccHHHHHHHHh--CCCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecc
Confidence            43  345555555442  45579999999997 677889999999999999985432 2233333346677776665421


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                               ...++.+.+++.++.+.  +.....|++  +++.++++.+.+++..+|++++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         271 EITLDPEARRRAIAFILDGLASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                     23455566677777773  345566777  99999999998887888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.95  E-value=1.2e-25  Score=189.04  Aligned_cols=247  Identities=26%  Similarity=0.346  Sum_probs=193.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++++++||+|+..                             ..|+|+||+.++.+.++++|++
T Consensus        30 ~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-----------------------------~~g~~~~~~~~~~~~~~~~p~~   80 (293)
T cd05195          30 PLGLECSGIVTRVGSGVTGLKVGDRVMGL-----------------------------APGAFATHVRVDARLVVKIPDS   80 (293)
T ss_pred             ccceeeeEEEEeecCCccCCCCCCEEEEE-----------------------------ecCcccceEEechhheEeCCCC
Confidence            57999999999999999999999999863                             2489999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEE
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNI  156 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~  156 (290)
                      +++.+++.+ ..+.+++.++.. ..++++++++|+|+ |.+|++++++++.+|+ .++++..++++.+.++.++  ++.+
T Consensus        81 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~  159 (293)
T cd05195          81 LSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHI  159 (293)
T ss_pred             CCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceE
Confidence            999988877 577889888754 78899999999976 9999999999999999 5888888888888888887  5666


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--ccccchhhhccCcEEEEe
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~  234 (290)
                      ++.  ...++.+.++++.  .+.++|+++|++|+. .....++.++++|+++.+|.....  ..+.... +.+...+...
T Consensus       160 ~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~  233 (293)
T cd05195         160 FSS--RDLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSV  233 (293)
T ss_pred             eec--CchhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEE
Confidence            653  3345555665542  456899999999975 889999999999999999864421  1222222 2233444332


Q ss_pred             eec----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          235 FRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       235 ~~~----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ...          .+.+..++++++++.+  .+.....+.+  +++.++++.+.+++..+|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         234 DLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--ASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             eHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hhHHHHHHHHhcCCCCceecC
Confidence            211          2357788899999987  4455566777  999999999998877788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=1.3e-25  Score=192.88  Aligned_cols=244  Identities=25%  Similarity=0.315  Sum_probs=187.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|+++++|++||+|++..                            ..|+|++|+.++++.++++|++
T Consensus        60 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (331)
T cd08273          60 TPGYDLVGRVDALGSGVTGFEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEG  111 (331)
T ss_pred             ccccceEEEEEEeCCCCccCCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCC
Confidence            679999999999999999999999999631                            2488999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++|+++.. ..+.++++++|+|+ |.+|++++++++.+|+ .++++.. +++.++++++|+.. ++
T Consensus       112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~  188 (331)
T cd08273         112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID  188 (331)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence            999988766 588899998865 78999999999987 9999999999999999 5777766 88888888899654 33


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc--ccc------------hhh
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPL------------TPA  224 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~------------~~~  224 (290)
                        ....++...  +.   .++++|+++|++|+. ....++++++++|+++.+|.......  +..            ...
T Consensus       189 --~~~~~~~~~--~~---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (331)
T cd08273         189 --YRTKDWLPA--ML---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKL  260 (331)
T ss_pred             --CCCcchhhh--hc---cCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcc
Confidence              222333322  12   235799999999975 58899999999999999986542211  110            001


Q ss_pred             --hccCcEEEEeeec--------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          225 --AVREVDVVGVFRY--------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       225 --~~~~~~i~~~~~~--------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                        ..+..........        .+.++++++++++|.+.  +.+.+.+++  ++++++++.+.+++..+|+|+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         261 LPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR--PKIAKRLPL--SEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             eeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc--CCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence              1122222222111        35688899999999884  446677888  999999999988888888875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.95  E-value=1.9e-25  Score=190.67  Aligned_cols=250  Identities=33%  Similarity=0.553  Sum_probs=201.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|+++.++++||+|+..+                            ..|++++|+.++.+.++++|++
T Consensus        60 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~  111 (323)
T cd08241          60 VPGSEVAGVVEAVGEGVTGFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDG  111 (323)
T ss_pred             cccceeEEEEEEeCCCCCCCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCC
Confidence            579999999999999999999999999642                            2588999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ++..+++.+ ..+.+|++++. ...++++++++|+|+ |.+|++++++++..|+ .++.++.++++.+.++.+|.+.+++
T Consensus       112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd08241         112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID  190 (323)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence            998888755 58888998886 478899999999998 9999999999999999 5788888888889888899877765


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc-ccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~  237 (290)
                      .  ...++.+.+.++.  .++++|+++|++|+ ..+..++++++++|+++.+|....... +.......+++++.+....
T Consensus       191 ~--~~~~~~~~i~~~~--~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (323)
T cd08241         191 Y--RDPDLRERVKALT--GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWG  265 (323)
T ss_pred             c--CCccHHHHHHHHc--CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecc
Confidence            3  3345666665542  45679999999997 678889999999999999986433222 2233455677777776432


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          238 ----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       238 ----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                                .+.++++++++.++.+  .+.....|++  +++.++++.+.+++..+|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         266 AYARREPELLRANLAELFDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             cccchhHHHHHHHHHHHHHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence                      2457789999999987  4446677888  9999999998888778888864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.95  E-value=2.9e-25  Score=190.19  Aligned_cols=251  Identities=21%  Similarity=0.296  Sum_probs=190.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|++  ++++++++||+|++....                     . ....+|+|++|+.++.++++++|++
T Consensus        60 ~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08288          60 VPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG---------------------V-GERHWGGYAQRARVKADWLVPLPEG  115 (324)
T ss_pred             ccccceEEEEEe--CCCCCCCCCCEEEECCcc---------------------C-CCCCCCcceeEEEEchHHeeeCCCC
Confidence            469999999998  777889999999974210                     0 0113689999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH---hcCCC-CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACR---RANIG-PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~---~~~~~-~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +++.+++.++ .+++++.+++   ..... +++++||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.
T Consensus       116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~  194 (324)
T cd08288         116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE  194 (324)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence            9999888774 6667776654   34445 5789999998 9999999999999999 4788778899999999999988


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  234 (290)
                      ++++..    +...++.+   ...++|.++|+++. ......+..++.+|+++.+|.... ....+...+..++.++.+.
T Consensus       195 ~~~~~~----~~~~~~~~---~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08288         195 IIDRAE----LSEPGRPL---QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGI  266 (324)
T ss_pred             EEEcch----hhHhhhhh---ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEE
Confidence            887532    22233333   23458999999996 467788888999999999986422 1123333444778888876


Q ss_pred             eec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...       .+.++.+.+++.++.+  .+ +.+.+++  +++.+|++.+.+++..+|+++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         267 DSVMAPIERRRAAWARLARDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             EeecccchhhHHHHHHHHHHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence            432       2346667778888877  33 3567788  99999999999998899999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=2e-25  Score=190.50  Aligned_cols=249  Identities=29%  Similarity=0.363  Sum_probs=185.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|++++++++||+|+...+.                         ...|+|++|+.++.+.++++|++
T Consensus        61 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~ip~~  115 (319)
T cd08267          61 IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-------------------------KGGGALAEYVVAPESGLAKKPEG  115 (319)
T ss_pred             cccceeeEEEEEeCCCCCCCCCCCEEEEeccC-------------------------CCCceeeEEEEechhheEECCCC
Confidence            47999999999999999999999999874321                         13589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.+||+++.. ..++++++++|+|+ |++|++++++++.+|+ .++++..+ ++.++++++|.+.+++
T Consensus       116 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~  193 (319)
T cd08267         116 VSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVID  193 (319)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeec
Confidence            999888866 478889999876 56899999999997 9999999999999999 57776655 7788889999887776


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEeccCCCCccccc-----hh-hhccCcEE
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPL-----TP-AAVREVDV  231 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~~-~~~~~~~i  231 (290)
                      ...  .++.   ..  .+.++++|++++|+|+. ......+..++++|+++.+|..........     .. ...+.+..
T Consensus       194 ~~~--~~~~---~~--~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (319)
T cd08267         194 YTT--EDFV---AL--TAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKF  266 (319)
T ss_pred             CCC--CCcc---hh--ccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEE
Confidence            432  2332   11  23456899999999852 222333344999999999986432211111     11 11122222


Q ss_pred             EEeeecCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          232 VGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       232 ~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      .......+.+++++++++++.+  .+...+.|++  +++++|++.+.+++..+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~--~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         267 FLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPL--EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             EEecCCHHHHHHHHHHHHCCCe--eeeeeeEEcH--HHHHHHHHHHhcCCCCCcEeC
Confidence            2221125678899999999987  4446677888  999999999998877788774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=4.4e-25  Score=188.94  Aligned_cols=253  Identities=26%  Similarity=0.350  Sum_probs=193.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|++++++++||+|++...                         ...+|+|++|+.+++++++++|++
T Consensus        59 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~  113 (325)
T cd08271          59 VPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDS  113 (325)
T ss_pred             ccccceEEEEEEeCCCCCcCCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCC
Confidence            5799999999999999999999999997421                         113589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++.+++.+ ..+.++++++.. +.++++++++|+|+ +.+|++++++++..|++ ++++. ++++.++++.+|.+.+++
T Consensus       114 ~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~  191 (325)
T cd08271         114 LSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVID  191 (325)
T ss_pred             CCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEec
Confidence            999988866 588889999865 78899999999998 89999999999999995 66665 667778888899887765


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc--ccchhhhccCcEEEEeee
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~  236 (290)
                        ....++...+.++.  .++++|++++++++. .....+++++++|+++.++.......  .....+.++.+++.....
T Consensus       192 --~~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (325)
T cd08271         192 --YNDEDVCERIKEIT--GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHD  266 (325)
T ss_pred             --CCCccHHHHHHHHc--CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEeccccc
Confidence              33345555565542  456799999999974 55678999999999999974322111  011123334444433322


Q ss_pred             c---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 Y---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .         .+.+.+++++++++.+.  +...+.+++  +++.++++.+.+++..+|+++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         267 HGDPAAWQDLRYAGEELLELLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence            1         23457788999998884  334566777  99999999999888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=8.3e-25  Score=188.13  Aligned_cols=249  Identities=29%  Similarity=0.382  Sum_probs=194.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+.+|++++++++||+|+..                            ..+|+|++|+.++.++++++|++
T Consensus        59 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~  110 (337)
T cd08275          59 VPGFECAGTVEAVGEGVKDFKVGDRVMGL----------------------------TRFGGYAEVVNVPADQVFPLPDG  110 (337)
T ss_pred             CCcceeEEEEEEECCCCcCCCCCCEEEEe----------------------------cCCCeeeeEEEecHHHeEECCCC
Confidence            67999999999999999999999999963                            23489999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHHHHcCCCEEE
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~lg~~~~~  157 (290)
                      +++.+++.+ ..+.++|+++.. ..++++++|+|+|+ |.+|++++++++.+ . .+.+++ ..+++.++++.+|.+.++
T Consensus       111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~  188 (337)
T cd08275         111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVI  188 (337)
T ss_pred             CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEe
Confidence            999888866 488889998754 78899999999998 99999999999998 2 233332 345677888889988777


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC--cccc---------------
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVP---------------  220 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~---------------  220 (290)
                      +.  ...++...++++.   ++++|+++|++|+ ......+++++++|+++.+|.....  ....               
T Consensus       189 ~~--~~~~~~~~~~~~~---~~~~d~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (337)
T cd08275         189 DY--RTQDYVEEVKKIS---PEGVDIVLDALGG-EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVD  262 (337)
T ss_pred             eC--CCCcHHHHHHHHh---CCCceEEEECCcH-HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccC
Confidence            63  3456666666653   4679999999997 5778899999999999999854321  1111               


Q ss_pred             chhhhccCcEEEEeeec---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          221 LTPAAVREVDVVGVFRY---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       221 ~~~~~~~~~~i~~~~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...++.+++++.+....         ...+.+++++++++.+  .+.....|++  ++++++++.+.+++..+|+++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         263 PMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            12345666776665421         1246778888989887  4445667888  99999999999888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.94  E-value=5.8e-25  Score=186.67  Aligned_cols=243  Identities=28%  Similarity=0.354  Sum_probs=189.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+.+|++++++++||+|+..+..                         ...|+|++|+.++...++++|++
T Consensus        62 ~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~  116 (309)
T cd05289          62 IPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPAN  116 (309)
T ss_pred             ccccceeEEEEeeCCCCCCCCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCC
Confidence            57999999999999999999999999975321                         12589999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++..++.+ ..+.++++++.. ..+.++++++|+|+ |.+|++++++++..|++ ++++..++ +.++++.+|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~  194 (309)
T cd05289         117 LSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVID  194 (309)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEe
Confidence            999888876 477788988866 55899999999997 99999999999999995 66666666 778888899877766


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ..  ..++.+      ...+.++|+++|++|+ .....++++++++|+++.+|.......    ....++.++...... 
T Consensus       195 ~~--~~~~~~------~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~  261 (309)
T cd05289         195 YT--KGDFER------AAAPGGVDAVLDTVGG-ETLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEP  261 (309)
T ss_pred             CC--CCchhh------ccCCCCceEEEECCch-HHHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecc
Confidence            33  223322      1245679999999997 478899999999999999986433111    222334444333222 


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                       .+.+++++++++++.+  .+.+++.|++  ++++++++.+..++..+|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         262 DGEQLAELAELVEAGKL--RPVVDRVFPL--EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             cHHHHHHHHHHHHCCCE--EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence             4578889999999987  4446677888  999999999988877778764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=6.6e-25  Score=175.07  Aligned_cols=242  Identities=17%  Similarity=0.197  Sum_probs=191.9

Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc--eEECCC--C
Q 022879            6 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFKLPD--N   81 (290)
Q Consensus         6 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~~P~--~   81 (290)
                      .++|+|++.  +-+.+++||.|++.                               =+|.||.+++++.  .+++|.  +
T Consensus        78 ~GV~kVi~S--~~~~~~~GD~v~g~-------------------------------~gWeeysii~~~~~~~~ki~~~~~  124 (343)
T KOG1196|consen   78 FGVAKVIDS--GHPNYKKGDLVWGI-------------------------------VGWEEYSVITPNDLEHFKIQHPTD  124 (343)
T ss_pred             CceEEEEec--CCCCCCcCceEEEe-------------------------------ccceEEEEecCcchhcccCCCCCc
Confidence            678999884  55679999999974                               2699999998764  445544  3


Q ss_pred             CChhhhh-hh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEE
Q 022879           82 VSLEEGA-MC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNI  156 (290)
Q Consensus        82 ~~~~~aa-~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~  156 (290)
                      ++..-.. .+ ++..|||-.+.. +.+++|++|+|.|| |++|+++.|+|+.+|+ .|++...+++|.++++. +|.+..
T Consensus       125 ~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~a  203 (343)
T KOG1196|consen  125 VPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDA  203 (343)
T ss_pred             cCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccc
Confidence            4433333 22 588899998854 88999999999987 9999999999999999 79999999999998865 799989


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Ccccc---chhhhccCcE
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMTVP---LTPAAVREVD  230 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~---~~~~~~~~~~  230 (290)
                      ++|.. +.+..+++++.   ...++|+.||++|+ ..++..+..|+..||++.+|.-+.   +.+..   +..++.++++
T Consensus       204 fNYK~-e~~~~~aL~r~---~P~GIDiYfeNVGG-~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~  278 (343)
T KOG1196|consen  204 FNYKE-ESDLSAALKRC---FPEGIDIYFENVGG-KMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIR  278 (343)
T ss_pred             eeccC-ccCHHHHHHHh---CCCcceEEEeccCc-HHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEE
Confidence            98743 34777777764   57899999999998 799999999999999999996441   22222   2346789999


Q ss_pred             EEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          231 VVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       231 i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+..-.      .+.++.+..++++|+++....+..  ++  ++.++|+..|-.++..||.++++
T Consensus       279 iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~--Gl--en~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  279 IQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIAD--GL--ENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             eeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHH--HH--hccHHHHHHHhccCcccceEEEe
Confidence            9886432      567888999999999976554432  57  99999999999999999998864

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.93  E-value=1.1e-25  Score=205.46  Aligned_cols=243  Identities=22%  Similarity=0.321  Sum_probs=193.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|.||+|+          .+-|.||.++..                            .-++++.+.++.+.+|.+|.+
T Consensus      1483 lLGmEFsGR----------d~~GrRvM~mvp----------------------------AksLATt~l~~rd~lWevP~~ 1524 (2376)
T KOG1202|consen 1483 LLGMEFSGR----------DASGRRVMGMVP----------------------------AKSLATTVLASRDFLWEVPSK 1524 (2376)
T ss_pred             eeceeeccc----------cCCCcEEEEeee----------------------------hhhhhhhhhcchhhhhhCCcc
Confidence            478888887          455899987532                            356888899999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEE-CCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cC---CC
Q 022879           82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IG---AD  154 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~-Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg---~~  154 (290)
                      ...++|++.| .|+|+||++- +.+.++|++|||| |+|++|++||.+|.+.|+ .|+++..++||++++.. |+   ..
T Consensus      1525 WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~ 1603 (2376)
T KOG1202|consen 1525 WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQET 1603 (2376)
T ss_pred             cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhh
Confidence            9999999886 8889999985 4899999999999 559999999999999999 57777788888887754 43   33


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccc-hhhhccCcEEEE
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVG  233 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~  233 (290)
                      ++-  ++++.+|...+  +.+++|+|+|+|++.... +.++..+++|+.+||+..+|-......-++ ...+.++.++.|
T Consensus      1604 ~~~--NSRdtsFEq~v--l~~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHG 1678 (2376)
T KOG1202|consen 1604 NFA--NSRDTSFEQHV--LWHTKGRGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHG 1678 (2376)
T ss_pred             ccc--ccccccHHHHH--HHHhcCCCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceee
Confidence            332  35667776555  446789999999999984 789999999999999999996554333333 346778888888


Q ss_pred             eeec------CCcHHHHHHHHHcCCCC--CCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          234 VFRY------KNTWPLCLELLRSGKID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       234 ~~~~------~~~l~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ....      .+.+.++..++++|.-.  ..|..+++|.-  .++++||+.|.++++.||+|+++
T Consensus      1679 iLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1679 ILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             eehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence            7543      45677777777765442  36777788877  99999999999999999999974

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.77  E-value=1.2e-17  Score=123.78  Aligned_cols=128  Identities=28%  Similarity=0.548  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHH
Q 022879          118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTA  197 (290)
Q Consensus       118 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  197 (290)
                      ++|++++|+|+++|+ ++++++++++|+++++++|++.+++++  +.++.+.+++++  ++.++|++|||+|.+..++.+
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--cccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence            589999999999996 799999999999999999999998854  456888888774  456899999999988899999


Q ss_pred             HHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec-CCcHHHHHHHHHc
Q 022879          198 LGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  250 (290)
Q Consensus       198 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~  250 (290)
                      +++++++|+++.+|... ....++...++++++++.+++.+ .++++++++++.+
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            99999999999999776 66678888899999999999988 4889999888764

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.70  E-value=1.9e-17  Score=118.59  Aligned_cols=77  Identities=38%  Similarity=0.726  Sum_probs=70.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEEC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL   78 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~   78 (290)
                      +|+|||++|+|+++|+++++|++||+|.+.+...|+.|.+|..+..++|+....++.. .+|+|+||+.+++++++++
T Consensus        33 ~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   33 LILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             EES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             cccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            4799999999999999999999999999999999999999999999999999888764 8999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.50  E-value=1e-12  Score=113.89  Aligned_cols=164  Identities=20%  Similarity=0.275  Sum_probs=130.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .-+|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+.+.++.+|+..+ +       ..+.+        .+.|++
T Consensus       199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v--------~~aDVV  261 (413)
T cd00401         199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV--------KEGDIF  261 (413)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH--------cCCCEE
Confidence            3589999999999999999999999999 68889999999999999997432 1       11111        358999


Q ss_pred             EEccCCHHHHHHH-HHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec--CCcHH--HHHHHHHcCCC-CCCCc
Q 022879          185 FDCAGLNKTMSTA-LGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWP--LCLELLRSGKI-DVKPL  258 (290)
Q Consensus       185 id~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~--~~~~~~~~g~~-~~~~~  258 (290)
                      |+|+|.+..+... +..++++|.++.+|..  +..++...+..+.+++.+.+.+  ...++  .++.++.+|.+ ++...
T Consensus       262 I~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~  339 (413)
T cd00401         262 VTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA  339 (413)
T ss_pred             EECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence            9999988777765 8999999999999954  4467777788899999998887  22566  79999999999 77766


Q ss_pred             eeeE-----eeCChh-hHHHHHHHHhcCCC-ceeEEEe
Q 022879          259 VTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMFN  289 (290)
Q Consensus       259 ~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gk~vl~  289 (290)
                      +++.     ++|  + ++.++++.+.+... ..|+++.
T Consensus       340 ~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         340 TGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             CCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEEC
Confidence            6665     556  8 99999988877643 3566653

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.48  E-value=1.6e-12  Score=115.35  Aligned_cols=155  Identities=17%  Similarity=0.260  Sum_probs=114.6

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EecCCC-----------cccHHHHHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-----------LQDIAEEVEK  172 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~-----------~~~~~~~~~~  172 (290)
                      ..++++|+|.|+|.+|+++++.|+.+|+ .|++++.++++.+.++++|++.+ ++....           .+++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4589999999999999999999999999 69999999999999999999854 432111           0122222222


Q ss_pred             HHHHhCCCccEEEEccCCH-----HH-HHHHHHHhccCCEEEEeccC-CCC--ccccchhhhc-cCcEEEEeeecCCcHH
Q 022879          173 IQKAMGTGIDVSFDCAGLN-----KT-MSTALGATCAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTWP  242 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~l~  242 (290)
                      ......+++|++|+|+|.+     .. ..++++.++++|+++.++.. +..  .+.+...++. +++++.|.++....+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p  320 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP  320 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence            2222235799999999963     25 48999999999999999964 332  3444445665 8999999887744454


Q ss_pred             -HHHHHHHcCCCCCCCcee
Q 022879          243 -LCLELLRSGKIDVKPLVT  260 (290)
Q Consensus       243 -~~~~~~~~g~~~~~~~~~  260 (290)
                       ++.+++.++.+++.+.++
T Consensus       321 ~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        321 TQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHhCCccHHHHhc
Confidence             699999999886555544

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.40  E-value=1.4e-13  Score=101.38  Aligned_cols=117  Identities=26%  Similarity=0.375  Sum_probs=78.8

Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC--CHHHHHHHHHHhccCCEEEEeccCCCCccccchh--hhc
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP--AAV  226 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~  226 (290)
                      ||++++++|+  .+++         ...+++|+|||++|  .+..+..++++| ++|+++.++.     ......  ...
T Consensus         1 LGAd~vidy~--~~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYR--DTDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETT--CSHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred             CCcCEEecCC--Cccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence            6899999875  3444         24678999999999  644446777788 9999999984     111111  112


Q ss_pred             cCcEEEEeee------cCCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          227 REVDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       227 ~~~~i~~~~~------~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ..++......      ..+.++++.+++++|++  ++.+.++|++  +++++|++.+++++..||+||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence            2333333331      24569999999999999  7788899999  999999999999999999996

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.70  E-value=7.5e-07  Score=79.44  Aligned_cols=105  Identities=20%  Similarity=0.282  Sum_probs=80.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-------------cccHHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDIAEEVEK  172 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~~~~~~~  172 (290)
                      .++.+++|.|+|.+|++++++++.+|+ .|++.+.++++++.++.+|.+.+. .+..             .+++.+...+
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~-v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccccceeecCHHHHHHHHH
Confidence            367899999999999999999999999 588999999999999999987532 2211             1233333333


Q ss_pred             HHHHhCCCccEEEEcc---CCHH---HHHHHHHHhccCCEEEEecc
Q 022879          173 IQKAMGTGIDVSFDCA---GLNK---TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +.....+++|++|+|+   |.+.   .....++.+++++.+++++.
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~  285 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA  285 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence            3333356799999999   5433   45678999999999999974

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.57  E-value=9.2e-07  Score=73.88  Aligned_cols=171  Identities=19%  Similarity=0.260  Sum_probs=104.2

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      +.++++++||..|+|+ |..++++++..|.. .+++++.+++..+.+++.    +...+...   ..+    +.++. ..
T Consensus        73 ~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d----~~~l~-~~  143 (272)
T PRK11873         73 AELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGE----IEALP-VA  143 (272)
T ss_pred             ccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecc----hhhCC-CC
Confidence            5688999999999877 88888888887764 699999999998888663    33222111   112    12111 12


Q ss_pred             CCCccEEEEcc------CCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEe-eecCCcHHHHHHHHHc
Q 022879          178 GTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLELLRS  250 (290)
Q Consensus       178 ~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~~~~~~~~~  250 (290)
                      ...||+|+...      .....+..+.+.|+++|+++..+..... .+  .....+...+.+. .......++..+++++
T Consensus       144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  220 (272)
T PRK11873        144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-EL--PEEIRNDAELYAGCVAGALQEEEYLAMLAE  220 (272)
T ss_pred             CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CC--CHHHHHhHHHHhccccCCCCHHHHHHHHHH
Confidence            34799998643      2345788999999999999987654322 11  1111122222111 1123456677777876


Q ss_pred             CCC-CCCCceeeEeeCChhhHHHHHHHH--hcCCCceeEE
Q 022879          251 GKI-DVKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVM  287 (290)
Q Consensus       251 g~~-~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gk~v  287 (290)
                      ..+ .........+.+  ++..++++.+  .+++..++.+
T Consensus       221 aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        221 AGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             CCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence            444 223333345566  8888999888  5544444444

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.41  E-value=7.8e-06  Score=71.64  Aligned_cols=103  Identities=20%  Similarity=0.271  Sum_probs=77.5

Q ss_pred             HHHHHHhc-CCC-CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHH
Q 022879           96 GVHACRRA-NIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        96 a~~~l~~~-~~~-~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      +|.++..+ .+. .|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|.. +.       ++    .+.
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l----~ea  264 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TM----EEA  264 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CH----HHH
Confidence            34444443 444 89999999999999999999999999 688898888887666666643 21       11    222


Q ss_pred             HHHhCCCccEEEEccCCHHHHH-HHHHHhccCCEEEEeccCCC
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  215 (290)
                      .    .+.|++|+++|....+. ..+..+++++.++..|....
T Consensus       265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence            1    36899999999876666 57888999999999986553

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.38  E-value=4.8e-05  Score=64.11  Aligned_cols=112  Identities=17%  Similarity=0.198  Sum_probs=81.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+++|.|.|.+|..+++.++.+|+ .|.+.++++++.+.++.+|...+ .+    +    .+.+.    -.++|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~----~l~~~----l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----S----ELAEE----VGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----H----HHHHH----hCCCCEEEE
Confidence            68999999999999999999999999 68888999888888888886532 11    1    22222    146999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~  234 (290)
                      |++..-.....++.+++++.++.++.......+  ...-.+.+++.+.
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~  262 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLA  262 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEE
Confidence            998643445677889999999999865443333  2333455555543

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.37  E-value=2.9e-05  Score=63.97  Aligned_cols=130  Identities=22%  Similarity=0.319  Sum_probs=85.3

Q ss_pred             cceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879           64 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus        64 ~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      |.+|.. +...++.+++++++..+....+ ..++..+.. ...++.+||-.|+|+ |..++.+++ .|...+++++.++.
T Consensus        79 ~~~~~~-~~~~~i~i~p~~afgtg~h~tt-~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~  153 (250)
T PRK00517         79 WEDPPD-PDEINIELDPGMAFGTGTHPTT-RLCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQ  153 (250)
T ss_pred             CcCCCC-CCeEEEEECCCCccCCCCCHHH-HHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHH
Confidence            555544 6677899999999887763322 223333332 256889999999987 887776554 67767999999999


Q ss_pred             HHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEeccC
Q 022879          144 RLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       144 ~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ..+.+++.    +....+....               ....||+|+.+....   ..+..+.+.|+++|.++..|..
T Consensus       154 ~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        154 AVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            88877552    2211111000               111599998776542   2456788889999999987643

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.32  E-value=2.3e-06  Score=72.71  Aligned_cols=107  Identities=24%  Similarity=0.317  Sum_probs=79.7

Q ss_pred             ceEECCCCCChhhhhhhhhhHHHHHHHHhcCC----CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHH
Q 022879           74 LCFKLPDNVSLEEGAMCEPLSVGVHACRRANI----GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVA  148 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~----~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~  148 (290)
                      ..+++|+.+..+.++...+.++++.+++.+..    -++.+|+|.|+|.+|..+++.++..|.+.++++++++++. +++
T Consensus       140 ~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la  219 (311)
T cd05213         140 KAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELA  219 (311)
T ss_pred             HHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            45777888888888877777778777765322    4789999999999999999999988887888899988764 677


Q ss_pred             HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHH
Q 022879          149 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT  193 (290)
Q Consensus       149 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  193 (290)
                      +++|.. ++++    ++    +.+..    ...|+||.|++.+..
T Consensus       220 ~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~  251 (311)
T cd05213         220 KELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY  251 (311)
T ss_pred             HHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence            888873 3221    11    22211    348999999998654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.28  E-value=9.1e-08  Score=84.44  Aligned_cols=157  Identities=22%  Similarity=0.265  Sum_probs=101.6

Q ss_pred             ccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEE---C-C
Q 022879            4 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK---L-P   79 (290)
Q Consensus         4 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~---~-P   79 (290)
                      |.|+++.+.+|+.+.++     +|++.+.. |+.|.+|    .+.|......|. ..++.|++++.++. .+..   + +
T Consensus        91 ~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~i~~  158 (417)
T TIGR01035        91 GESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETDISA  158 (417)
T ss_pred             chHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcCCCC
Confidence            56677777777777765     56666666 7777777    334544444432 45789999988876 3322   2 2


Q ss_pred             CCCChhhhhhhhhhHHHHH-HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEE
Q 022879           80 DNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIV  157 (290)
Q Consensus        80 ~~~~~~~aa~~~~~~ta~~-~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~  157 (290)
                      ..++...+|        .. +.+.....++++++|.|+|.+|..+++.++..|+..+++++++.++.+ +++.++.. .+
T Consensus       159 ~~vSv~~~A--------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i  229 (417)
T TIGR01035       159 GAVSISSAA--------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AV  229 (417)
T ss_pred             CCcCHHHHH--------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-Ee
Confidence            223322221        11 122334467899999999999999999999999768888889887754 66777753 22


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHH
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT  193 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  193 (290)
                      .+    .+    +.+..    .++|+||+|++.+..
T Consensus       230 ~~----~~----l~~~l----~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       230 KF----ED----LEEYL----AEADIVISSTGAPHP  253 (417)
T ss_pred             eH----HH----HHHHH----hhCCEEEECCCCCCc
Confidence            21    12    22221    358999999987543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.18  E-value=3.9e-05  Score=66.91  Aligned_cols=93  Identities=22%  Similarity=0.272  Sum_probs=72.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .-.|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|.. +.       +..+.+        .+.|++
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~leeal--------~~aDVV  254 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEEAA--------KIGDIF  254 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHHHH--------hcCCEE
Confidence            3689999999999999999999999999 588898888877666666652 21       111111        347999


Q ss_pred             EEccCCHHHHHH-HHHHhccCCEEEEeccCC
Q 022879          185 FDCAGLNKTMST-ALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       185 id~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  214 (290)
                      |+++|....+.. .+..+++++.++..|...
T Consensus       255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       255 ITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             EECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            999998777764 888999999999998654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.12  E-value=0.0015  Score=54.84  Aligned_cols=185  Identities=12%  Similarity=0.100  Sum_probs=104.2

Q ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCcCCC-CChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCCChhhh
Q 022879            9 GVIEKVGSEVKTLVPGDRVALEPGISCW-RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG   87 (290)
Q Consensus         9 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a   87 (290)
                      ++|++  ++++++.+|.||+++-..... ..........++.+.+.-  .....-.|-+|.++..+..+.    -+.+..
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~h--R~~l~~~YN~Y~r~~~d~~y~----~~~e~~  110 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPH--RAGLPPIYNQYLRVSADPAYD----PEREDW  110 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhh--hCcCchhhhceeecCCCcccC----cchhHH
Confidence            66776  888999999999985322110 000000000111110000  011223455555555443321    122222


Q ss_pred             -hhh-hhhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHcC-CCEEEec
Q 022879           88 -AMC-EPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKV  159 (290)
Q Consensus        88 -a~~-~~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~  159 (290)
                       +++ +.+.|.|..-+-   ...-..+.|+|.+| +-.+...+..++ ..+..+++++ +|+.+.++.+.+| .+.++.|
T Consensus       111 ~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vgl-TS~~N~~Fve~lg~Yd~V~~Y  189 (314)
T PF11017_consen  111 QMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGL-TSARNVAFVESLGCYDEVLTY  189 (314)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEE-ecCcchhhhhccCCceEEeeh
Confidence             233 567777755432   22345567788877 777877777777 4555478888 5566777999999 5566665


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCC-EEEEeccC
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG-KVCLVGMG  213 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~  213 (290)
                      +.        +..+   ....--+++|..|..+....+...++..= ..+.+|..
T Consensus       190 d~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t  233 (314)
T PF11017_consen  190 DD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT  233 (314)
T ss_pred             hh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence            42        3333   23456789999999888778888887653 45566643

>PLN02494 adenosylhomocysteinase

Probab=98.06  E-value=6.3e-05  Score=66.32  Aligned_cols=92  Identities=20%  Similarity=0.253  Sum_probs=72.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|... .       +..+.+        ...|+++
T Consensus       252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal--------~~ADVVI  314 (477)
T PLN02494        252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVV--------SEADIFV  314 (477)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHH--------hhCCEEE
Confidence            468999999999999999999999999 6888988887766666666542 1       111111        2479999


Q ss_pred             EccCCHHHH-HHHHHHhccCCEEEEeccCC
Q 022879          186 DCAGLNKTM-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       186 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      .+.|....+ ...++.+++++.++.+|...
T Consensus       315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            999986553 78999999999999999743

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.04  E-value=7.3e-05  Score=58.62  Aligned_cols=112  Identities=16%  Similarity=0.183  Sum_probs=80.1

Q ss_pred             hhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEecC-CCc
Q 022879           89 MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVS-TNL  163 (290)
Q Consensus        89 ~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~-~~~  163 (290)
                      +++.......+++...++++++||-.|+|+ |+.++-+++..|  .|+.++..++=.+    .++.+|...+.... +..
T Consensus        54 tis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~  130 (209)
T COG2518          54 TISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS  130 (209)
T ss_pred             eecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc
Confidence            443333344466677899999999999987 999999999988  6999999887444    34668864443322 111


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          164 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..|.         ...+||.|+-+.+.++.-..+++.|+++|+++.--.
T Consensus       131 ~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         131 KGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             cCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            2221         236899999888876666789999999999987643

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.91  E-value=0.00013  Score=63.41  Aligned_cols=96  Identities=22%  Similarity=0.318  Sum_probs=67.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++.+++|.|+|.+|+.+++.++.+|+ .|+++++++++.+.+. .++......+ .   + .+.+.+..    ..+|++|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~-~~~l~~~l----~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRY-S---N-AYEIEDAV----KRADLLI  235 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEecc-C---C-HHHHHHHH----ccCCEEE
Confidence            34669999999999999999999999 5888999888877664 4554321111 1   1 12233321    3689999


Q ss_pred             EccCC-----HH-HHHHHHHHhccCCEEEEecc
Q 022879          186 DCAGL-----NK-TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       186 d~~g~-----~~-~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ++++.     +. .....++.+++++.++.++.
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            99832     11 13567788999999999884

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.87  E-value=0.00044  Score=65.40  Aligned_cols=141  Identities=21%  Similarity=0.259  Sum_probs=82.6

Q ss_pred             cccceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC
Q 022879           62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus        62 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      .++.+|..+++..++.+ +.++.+++....        .......+++++||+|+ |++|...++.+...|+ .|+.+++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence            34456666666655555 444444443110        00112236789999987 9999999999999999 6888888


Q ss_pred             ChhHHHHH-HHcCC---CEEEecCCCc-ccHHHHHHHHHHHhCCCccEEEEccCCH------------------------
Q 022879          141 DDYRLSVA-KEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLN------------------------  191 (290)
Q Consensus       141 ~~~~~~~~-~~lg~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~------------------------  191 (290)
                      ++++.+.+ +.++.   ...+..+-.+ ++..+.+++..+ ..+++|++|+++|..                        
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~-~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~  533 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAAL-AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH  533 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHH-HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            88776544 33442   1122222222 223333333322 234799999999831                        


Q ss_pred             -HHHHHHHHHhcc---CCEEEEeccC
Q 022879          192 -KTMSTALGATCA---GGKVCLVGMG  213 (290)
Q Consensus       192 -~~~~~~~~~l~~---~G~~v~~g~~  213 (290)
                       ...+.++..+++   +|+++.++..
T Consensus       534 ~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        534 FLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence             123334555555   5889988753

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.85  E-value=5.1e-05  Score=67.37  Aligned_cols=158  Identities=21%  Similarity=0.274  Sum_probs=92.9

Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCC
Q 022879            3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV   82 (290)
Q Consensus         3 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~   82 (290)
                      -|+|+++.+.+|+.+..+.-+|+.-     . |+.   |.. ..+.|......+. ..++.|++++.+        |+.+
T Consensus        92 ~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQ---vk~-a~~~a~~~g~~g~-~l~~lf~~a~~~--------~k~v  152 (423)
T PRK00045         92 EGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQ---VKD-AYALAQEAGTVGT-ILNRLFQKAFSV--------AKRV  152 (423)
T ss_pred             CCHHHHHHHHHHHhhhhhhhcCChH-----H-HHH---HHH-HHHHHHHcCCchH-HHHHHHHHHHHH--------HhhH
Confidence            3777777777777777664444322     1 121   111 1111221111111 234555554433        4444


Q ss_pred             ChhhhhhhhhhHHHHHHHHhc----CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEE
Q 022879           83 SLEEGAMCEPLSVGVHACRRA----NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIV  157 (290)
Q Consensus        83 ~~~~aa~~~~~~ta~~~l~~~----~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~  157 (290)
                      ..+.+..-.+.++++++++.+    ...++.+++|.|+|.+|..+++.++..|++.+++++++.++.+ +++.+|.. ++
T Consensus       153 ~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~  231 (423)
T PRK00045        153 RTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AI  231 (423)
T ss_pred             hhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-Ee
Confidence            433333333566667676542    2357899999999999999999999999877888889887755 77778753 22


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  192 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  192 (290)
                      ++    .+    +.+.    -.++|+||+|+|.+.
T Consensus       232 ~~----~~----~~~~----l~~aDvVI~aT~s~~  254 (423)
T PRK00045        232 PL----DE----LPEA----LAEADIVISSTGAPH  254 (423)
T ss_pred             eH----HH----HHHH----hccCCEEEECCCCCC
Confidence            21    11    2221    136899999999754

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.80  E-value=2.4e-05  Score=72.22  Aligned_cols=81  Identities=22%  Similarity=0.393  Sum_probs=56.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC---------------------hhHHHHHHHcCCCEEEecCCC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---------------------DYRLSVAKEIGADNIVKVSTN  162 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~~~~~~~~  162 (290)
                      ..++|++|+|.|+|++|+++++.++..|+ .|++++..                     +.+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            35789999999999999999999999999 47777642                     34566778899776554211 


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEccCCHH
Q 022879          163 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  192 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  192 (290)
                      ..+..  ..+.    ..++|++|+++|...
T Consensus       211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        211 GEDIT--LEQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CCcCC--HHHH----HhhCCEEEEeeCCCC
Confidence            01211  1111    135999999999753

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.73  E-value=0.00099  Score=59.08  Aligned_cols=93  Identities=22%  Similarity=0.282  Sum_probs=71.0

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .-.|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. .       ++    .++.    ...|+|
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~l----eell----~~ADIV  313 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TL----EDVV----ETADIF  313 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cH----HHHH----hcCCEE
Confidence            4479999999999999999999999999 6888877777664444455431 1       12    2221    358999


Q ss_pred             EEccCCHHHHH-HHHHHhccCCEEEEeccCC
Q 022879          185 FDCAGLNKTMS-TALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       185 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  214 (290)
                      +.++|....+. ..+..+++++.++.+|...
T Consensus       314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            99999766664 7899999999999998654

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.73  E-value=0.00065  Score=57.02  Aligned_cols=99  Identities=16%  Similarity=0.193  Sum_probs=70.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+++++|.|.|.+|.++++.++.+|+ .|.+.++++++.+.+.+.+...+ .       + +.+.+.    -...|+||+
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~----l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEK----VAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHH----hccCCEEEE
Confidence            57899999999999999999999999 68888888887776666664321 1       1 122222    146899999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccc
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV  219 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  219 (290)
                      +++..-.-...++.++++..++.++.......+
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence            997532224566778888888888765443333

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.69  E-value=0.00059  Score=57.44  Aligned_cols=127  Identities=18%  Similarity=0.223  Sum_probs=76.4

Q ss_pred             CceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-
Q 022879           73 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-  151 (290)
Q Consensus        73 ~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-  151 (290)
                      .....+.+++.+..+.. ++...+..++.. ...++++||-.|+|+ |..++.+++ .|...+++++.++...+.+++. 
T Consensus       127 ~~~i~ldpg~aFgtG~h-~tt~l~l~~l~~-~~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~  202 (288)
T TIGR00406       127 ALIIMLDPGLAFGTGTH-PTTSLCLEWLED-LDLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNA  202 (288)
T ss_pred             cEEEEECCCCcccCCCC-HHHHHHHHHHHh-hcCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHH
Confidence            34455666665554432 111122333333 245789999999987 877777665 5777899999999887776542 


Q ss_pred             ---CCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEeccC
Q 022879          152 ---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       152 ---g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                         +.. .+.....   +    ...   ....+||+|+......   ..+..+.+.|+++|.++..|..
T Consensus       203 ~~n~~~~~~~~~~~---~----~~~---~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       203 ELNQVSDRLQVKLI---Y----LEQ---PIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHcCCCcceEEEec---c----ccc---ccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence               211 1111111   1    000   1235799999866543   3456678899999999987643

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.69  E-value=0.00029  Score=52.19  Aligned_cols=74  Identities=24%  Similarity=0.342  Sum_probs=53.4

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC--EEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      -.+.+++|.|+|++|.+++..+...|++.+..+.++.+|.+.+ +.++..  ..+.++    ++.+.+        ..+|
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~--------~~~D   77 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEAL--------QEAD   77 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHH--------HTES
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHH--------hhCC
Confidence            3688999999999999999999999998899999998876644 556432  233322    221111        3599


Q ss_pred             EEEEccCCH
Q 022879          183 VSFDCAGLN  191 (290)
Q Consensus       183 ~vid~~g~~  191 (290)
                      +||+|++.+
T Consensus        78 ivI~aT~~~   86 (135)
T PF01488_consen   78 IVINATPSG   86 (135)
T ss_dssp             EEEE-SSTT
T ss_pred             eEEEecCCC
Confidence            999999874

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.68  E-value=0.00052  Score=56.28  Aligned_cols=84  Identities=24%  Similarity=0.279  Sum_probs=58.8

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-----CEEEecCCCcccHHHHHHHHHHHhC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-----DNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ..+.++||+|| +++|...+..+...|. .++.+.+++++++.+ +++.-     ..++..|-.+.+-.+.+.+-....+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            46789999999 9999999999999999 688888999987755 33331     1345444333333334433323344


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      ..+|+.++++|-
T Consensus        83 ~~IdvLVNNAG~   94 (265)
T COG0300          83 GPIDVLVNNAGF   94 (265)
T ss_pred             CcccEEEECCCc
Confidence            589999999986

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.67  E-value=0.0023  Score=52.02  Aligned_cols=105  Identities=21%  Similarity=0.214  Sum_probs=65.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADNIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      +++++||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +.+   +....+..+-.+ ++..+.+++... .-.+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAK-VLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence            4689999988 9999999999999999 578888888776554 322   222333322222 223333333221 1246


Q ss_pred             ccEEEEccCCHH-----------------------HHHHHHHHhccCCEEEEeccC
Q 022879          181 IDVSFDCAGLNK-----------------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       181 ~d~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|.++.+.|...                       .++..+..++++|+++.++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            899999887421                       133455566678899988754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.66  E-value=0.0026  Score=51.02  Aligned_cols=82  Identities=28%  Similarity=0.356  Sum_probs=57.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC--CEEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA--DNIVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .++.++|+|| +++|.+.++.+...|+ +++.+.+..++++.+ .+++.  -..+..+- ..++..+.+..+.+ .-+.+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCcc
Confidence            4577899998 9999999999999999 688888998887755 56773  22222222 22344444544433 23569


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999886

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.61  E-value=0.00073  Score=52.52  Aligned_cols=84  Identities=21%  Similarity=0.284  Sum_probs=60.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .|.+|||+|+ +++|+..++-...+|- .|+...+++++++.++....+ +....+-.+.+...++.+|....-...+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            5789999965 9999999998888998 688889999999888764322 112222233444445555555555679999


Q ss_pred             EEccCCH
Q 022879          185 FDCAGLN  191 (290)
Q Consensus       185 id~~g~~  191 (290)
                      +++.|..
T Consensus        83 iNNAGIq   89 (245)
T COG3967          83 INNAGIQ   89 (245)
T ss_pred             eeccccc
Confidence            9999864

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.60  E-value=0.0016  Score=50.09  Aligned_cols=101  Identities=22%  Similarity=0.284  Sum_probs=70.5

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ...+++++++++=.|+|+ |..+++++...-..++++++++++..+..    ++||.+.+.......+   +.+.+    
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap---~~L~~----   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP---EALPD----   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch---HhhcC----
Confidence            346789999777778866 77888888655555899999999988876    4588665444332222   22221    


Q ss_pred             hCCCccEEEEccCC--HHHHHHHHHHhccCCEEEEe
Q 022879          177 MGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~  210 (290)
                       ...+|.+|---|.  ++.++.++..|+++|++|.-
T Consensus       100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n  134 (187)
T COG2242         100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN  134 (187)
T ss_pred             -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence             2258999865443  35788899999999999865

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.58  E-value=0.0015  Score=51.73  Aligned_cols=102  Identities=22%  Similarity=0.362  Sum_probs=70.1

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcC-CCEEEecCCCcccHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIG-ADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ....+.+++++|..|+|+ |.+++++++.++. ..+++++.+++..+.++    .++ .+.+....   .+..+.+..  
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~--  107 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT--  107 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh--
Confidence            446788999999999988 8899999987653 37999999998887654    355 23322211   122222221  


Q ss_pred             HHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879          175 KAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  210 (290)
                        ....+|.||...+.   ...+..+.+.|+++|+++..
T Consensus       108 --~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        108 --INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             --cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence              23579999985543   34677788899999999853

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.0011  Score=55.47  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=55.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+.+...+... +..+-. .+++...+++..+..++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~-~~~Dl~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEA-FQLDYAEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceE-EEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence            4678999988 9999999998888899 6888888888877666555432 222222 2233333444333234579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        81 i~~Ag~   86 (277)
T PRK05993         81 FNNGAY   86 (277)
T ss_pred             EECCCc
Confidence            999763

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.44  E-value=0.0051  Score=50.97  Aligned_cols=114  Identities=22%  Similarity=0.292  Sum_probs=70.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EE--ecCC-CcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IV--KVST-NLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~-~~~~~~~~~~~~~~~~  177 (290)
                      .++.|+|+|| +++|.+.+.-.-..|++ ++.+.+..++++.+    ++++... ++  ..|- ..++..+.+. +....
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~-~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE-WAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH-HHHHh
Confidence            5788999999 99998888877788995 44444666655554    3444332 22  2222 2233333442 22234


Q ss_pred             CCCccEEEEccCCHH-------------------------HHHHHHHHhccC--CEEEEeccCCCCccccch
Q 022879          178 GTGIDVSFDCAGLNK-------------------------TMSTALGATCAG--GKVCLVGMGHHEMTVPLT  222 (290)
Q Consensus       178 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~  222 (290)
                      -+++|+.+++.|-..                         ....++..|++.  |+++.++...+...+|..
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~  160 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR  160 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence            568999999988631                         223366666543  999999876655555544

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.38  E-value=0.0034  Score=53.46  Aligned_cols=103  Identities=23%  Similarity=0.286  Sum_probs=71.8

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      .++...++++++||..|+|. |..++.+++..+. ..|++++.+++..+.++    ..|.+.+....   .+..+...  
T Consensus        72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~--  145 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVP--  145 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhccc--
Confidence            44456788999999999974 9999999998764 25899999998766554    35654433221   22211111  


Q ss_pred             HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                         ....+|+|+.+.+.+......++.|+++|+++..
T Consensus       146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence               1246999999988766666788899999998763

>PRK12742 oxidoreductase; Provisional

Probab=97.32  E-value=0.0069  Score=49.20  Aligned_cols=78  Identities=22%  Similarity=0.291  Sum_probs=47.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +++++||+|+ |++|...++.+...|++ ++.+. +++++.+ +.+.++... +..+-.  +. +.+.++.+. .+++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~--~~-~~~~~~~~~-~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATA-VQTDSA--DR-DAVIDVVRK-SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeE-EecCCC--CH-HHHHHHHHH-hCCCcE
Confidence            4679999987 99999999999999995 55543 3444443 334455432 222222  21 123333222 246999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        79 li~~ag~   85 (237)
T PRK12742         79 LVVNAGI   85 (237)
T ss_pred             EEECCCC
Confidence            9999875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.28  E-value=0.0037  Score=49.01  Aligned_cols=113  Identities=18%  Similarity=0.192  Sum_probs=73.5

Q ss_pred             CCCCeEEEEC-C-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          106 GPETNVLIMG-A-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       106 ~~~~~vlI~G-a-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .....|||+| + |++|.+...-....|+ .|+++.++-+..+-+. ++|.. .-+|. ..+++......+.+....++.
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCce
Confidence            3557899996 4 9999998888888899 7999988888777554 56622 22222 334455555556655456789


Q ss_pred             cEEEEccCCHH----------H--------------HHHH--HHHhccCCEEEEeccCCCCcccc
Q 022879          182 DVSFDCAGLNK----------T--------------MSTA--LGATCAGGKVCLVGMGHHEMTVP  220 (290)
Q Consensus       182 d~vid~~g~~~----------~--------------~~~~--~~~l~~~G~~v~~g~~~~~~~~~  220 (290)
                      |+.++..|.+=          .              +..+  -...+..|+++.+|....-.+++
T Consensus        83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp  147 (289)
T KOG1209|consen   83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP  147 (289)
T ss_pred             EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence            99999887631          1              1112  22447789999998644333333

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.26  E-value=0.0011  Score=52.71  Aligned_cols=106  Identities=22%  Similarity=0.266  Sum_probs=68.9

Q ss_pred             HHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHH----HHcCCCEEEecCCC-cccHHH
Q 022879           95 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVA----KEIGADNIVKVSTN-LQDIAE  168 (290)
Q Consensus        95 ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~  168 (290)
                      +-..+++...+++|++||-.|+|+ |+.++-+++..|.. .|++++..++-.+.+    +.++...+...... ...+  
T Consensus        60 ~~a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~--  136 (209)
T PF01135_consen   60 MVARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW--  136 (209)
T ss_dssp             HHHHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT--
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc--
Confidence            334456667799999999999876 88888888887754 588998888655444    44565433221111 1111  


Q ss_pred             HHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          169 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                             ....+||.|+-+.+.+..-...++.|+++|+++..
T Consensus       137 -------~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  137 -------PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -------GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             -------ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence                   12357999999888766667888999999999984

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.26  E-value=0.011  Score=53.16  Aligned_cols=81  Identities=25%  Similarity=0.336  Sum_probs=49.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCCEEEecCCCccc-HHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQD-IAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  181 (290)
                      +++++||+|+ |++|...++.+...|+ .++.++.++  ++ .+..++++... +..+-.+.+ ..+.+....+ ...++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~-~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTA-LALDITAPDAPARIAEHLAE-RHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeE-EEEeCCCHHHHHHHHHHHHH-hCCCC
Confidence            4789999988 9999999999999999 577776643  22 23334455432 222222222 2222233322 23479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus       286 d~vi~~AG~  294 (450)
T PRK08261        286 DIVVHNAGI  294 (450)
T ss_pred             CEEEECCCc
Confidence            999999983

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.25  E-value=0.0085  Score=48.04  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=68.7

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      +++...++++++||-.|+|. |..+..+++..+. ..+++++.+++..+.+++    ++...+.....+....      +
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------~  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------Y  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------C
Confidence            44556789999999998876 7777888887764 279999999888776644    4433221111111000      0


Q ss_pred             HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                        ....+||+|+-............+.|+++|+++..
T Consensus       141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence              12357999976655555667788899999998875

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.23  E-value=0.0057  Score=51.02  Aligned_cols=130  Identities=21%  Similarity=0.285  Sum_probs=78.5

Q ss_pred             CCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-
Q 022879           72 ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-  150 (290)
Q Consensus        72 ~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-  150 (290)
                      ....+++.+++.|...... +...++.+++. .++++.++|=.|+|+ |.++|..++ +|+..+++++-++...+..++ 
T Consensus       129 ~~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~-~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eN  204 (300)
T COG2264         129 DELNIELDPGLAFGTGTHP-TTSLCLEALEK-LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAREN  204 (300)
T ss_pred             CceEEEEccccccCCCCCh-hHHHHHHHHHH-hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHH
Confidence            3556778888876544322 22223334443 356899999999866 666666554 488889999999877766654 


Q ss_pred             --cC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEeccC
Q 022879          151 --IG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       151 --lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                        +. .... .. ...-..   ..   ...+.+||+|+-++=..   ...+.....++|+|++++-|-.
T Consensus       205 a~~N~v~~~-~~-~~~~~~---~~---~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl  265 (300)
T COG2264         205 ARLNGVELL-VQ-AKGFLL---LE---VPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL  265 (300)
T ss_pred             HHHcCCchh-hh-cccccc---hh---hcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence              22 2210 00 000000   00   11235899999877532   2445677889999999998843

>PRK14967 putative methyltransferase; Provisional

Probab=97.22  E-value=0.01  Score=47.97  Aligned_cols=99  Identities=27%  Similarity=0.335  Sum_probs=64.4

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      +....++++++||-.|+|. |..++.+++. +...+++++.+++..+.++.    .+....+.    ..++.+.+     
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~----~~d~~~~~-----   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR----RGDWARAV-----   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE----ECchhhhc-----
Confidence            3344577889999999987 8888888875 55579999999988776543    33321111    12322211     


Q ss_pred             HhCCCccEEEEccCC---------------------------HHHHHHHHHHhccCCEEEEe
Q 022879          176 AMGTGIDVSFDCAGL---------------------------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       176 ~~~~~~d~vid~~g~---------------------------~~~~~~~~~~l~~~G~~v~~  210 (290)
                       ....||+|+...+.                           ...+..+.+.|+++|+++.+
T Consensus        98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             23579999875320                           11345677889999998865

>PRK08017 oxidoreductase; Provisional

Probab=97.22  E-value=0.0046  Score=50.87  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=53.4

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +++||+|+ |.+|...++.+...|. .++++.+++++.+.++..+...+. .+-.+ +++.+.+.......+..+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGIL-LDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEE-eecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            57999998 9999999999998999 588888888888777766654322 22211 22222233332222356899998


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            8774

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.20  E-value=0.0013  Score=50.62  Aligned_cols=100  Identities=18%  Similarity=0.262  Sum_probs=66.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe-cCCC--------------cccHHHHHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK-VSTN--------------LQDIAEEVE  171 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~-~~~~--------------~~~~~~~~~  171 (290)
                      +..+|+|.|+|.+|+.|+++++.+|+ .++..+...++.+..+.++...+.. +...              ...+...+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            44789999999999999999999999 6888999999888888887655433 1111              233344444


Q ss_pred             HHHHHhCCCccEEEEccCC-----HH-HHHHHHHHhccCCEEEEec
Q 022879          172 KIQKAMGTGIDVSFDCAGL-----NK-TMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g~-----~~-~~~~~~~~l~~~G~~v~~g  211 (290)
                      +..    ..+|++|.+.-.     +. .....++.|+++..++.+.
T Consensus        98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            332    247898864321     11 2345778889888888886

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.20  E-value=0.0033  Score=48.88  Aligned_cols=91  Identities=23%  Similarity=0.215  Sum_probs=63.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.|.+|.|.|.|.+|+..++.++.+|+ .|++.+++....+.....+...        .++.+.++        ..|+|+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~--------~aDiv~   96 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLA--------QADIVS   96 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHH--------H-SEEE
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcc--------hhhhhh
Confidence            368999999999999999999999999 7999988888766445555321        13333322        368998


Q ss_pred             EccCCHH-----HHHHHHHHhccCCEEEEeccC
Q 022879          186 DCAGLNK-----TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      .+....+     .-...++.++++..+|.++..
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG  129 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVARG  129 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSG
T ss_pred             hhhccccccceeeeeeeeeccccceEEEeccch
Confidence            8776422     123567888888888888653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.005  Score=51.36  Aligned_cols=79  Identities=23%  Similarity=0.267  Sum_probs=53.2

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +++||+|+ |++|...++.+...|+ .|+++++++++.+.+...+...+ .|. ...+++.+.++.+.+ ...++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence            47899988 9999999999988999 68888888877666655554322 222 122333333444332 2356999999


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9984

>PRK06182 short chain dehydrogenase; Validated

Probab=97.19  E-value=0.0063  Score=50.72  Aligned_cols=81  Identities=21%  Similarity=0.219  Sum_probs=54.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ++++++|+|+ |.+|...++.+...|+ .|+++++++++.+.+...+... +..+- ..+++.+.+++..+ ...++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~-~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHP-LSLDVTDEASIKAAVDTIIA-EEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeE-EEeeCCCHHHHHHHHHHHHH-hcCCCCEE
Confidence            3578999988 9999999999888999 6888888887766554444332 22222 22334344444333 33579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999984

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0066  Score=50.00  Aligned_cols=81  Identities=25%  Similarity=0.336  Sum_probs=52.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +++++||+|+ |.+|...++.+...|+ .++.+++++.+.+.. +.++.. .+..+-.+ +++.+.++++.+ ..+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAE-TYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4789999998 9999999999988999 577777877665433 445432 23222222 233333333322 2346999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998874

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.15  E-value=0.017  Score=41.63  Aligned_cols=102  Identities=24%  Similarity=0.315  Sum_probs=66.9

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ....+.+++++|-.|+|. |..+..+++..+...+++++.++...+.++.    ++...+.....   +....+..    
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~----   84 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED----   84 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence            334567788888899877 8889999998754579999999988776643    44322211111   11100111    


Q ss_pred             hCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879          177 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ....+|+|+-..+.   ...++.+.+.|+++|.++..
T Consensus        85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            12479999876543   23677899999999999864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0072  Score=51.97  Aligned_cols=82  Identities=27%  Similarity=0.366  Sum_probs=53.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+    +..+... ++..+-.+ ++..+.+++..+ ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence            4679999998 9999999999999999 577888888776533    3345432 22222222 223333333322 235


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0088  Score=49.25  Aligned_cols=82  Identities=23%  Similarity=0.340  Sum_probs=53.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-c---C-CCEEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-I---G-ADNIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l---g-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |.+|..++..+...|+ .|+.+.+++++.+.+.. +   + ...++..+- ..+++.+.+++..+ ..+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence            4789999987 9999999999998999 58888888777543322 2   2 122333222 22234343444332 235


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.024  Score=48.81  Aligned_cols=82  Identities=20%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+    +..+... .+..+-. .+++.+.++++.+ .-+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~-~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE-ELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH-HCC
Confidence            4678999988 9999999999888999 577777887765433    2334332 2222222 2223333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.07  E-value=0.013  Score=46.98  Aligned_cols=104  Identities=18%  Similarity=0.200  Sum_probs=67.1

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~  172 (290)
                      .+++...++++++||-.|+|. |..++.+++..+. ..|++++.+++..+.++    .++.+.+.....   +..+..  
T Consensus        68 ~~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--  141 (215)
T TIGR00080        68 MMTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--  141 (215)
T ss_pred             HHHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--
Confidence            344556788999999998866 6677778887653 25899999988777664    344332211111   111100  


Q ss_pred             HHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                         ....+||+|+-....+.......+.|+++|+++..
T Consensus       142 ---~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       142 ---EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ---cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence               01347999886554445666788999999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.029  Score=46.43  Aligned_cols=82  Identities=23%  Similarity=0.283  Sum_probs=52.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+ ..++++.. ..+..+- +.+++.+.+++..+. -..+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999987 9999999999888999 6888888876544 33445422 1222222 222333333333322 24699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.032  Score=45.59  Aligned_cols=82  Identities=16%  Similarity=0.143  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~  179 (290)
                      ++.+++|+|+ |.+|...+..+...|+ .++.+++++++.+.. +.   .+.. .++..+-.+. ++.+.+++..+ .-.
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA-ALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4688999988 9999999999888999 577777777654432 22   2322 2222222222 22222222222 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.02  E-value=0.03  Score=43.44  Aligned_cols=92  Identities=18%  Similarity=0.256  Sum_probs=61.7

Q ss_pred             EEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          111 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       111 vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      |+|.|+ |.+|...++.+...|. .|.++.+++++.+.  ..+.+ ++..+.  .+. +.+.+..    .++|.||.++|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence            689998 9999999999999997 68888899888776  33333 333332  222 2233221    37999999998


Q ss_pred             C----HHHHHHHHHHhccCC--EEEEeccC
Q 022879          190 L----NKTMSTALGATCAGG--KVCLVGMG  213 (290)
Q Consensus       190 ~----~~~~~~~~~~l~~~G--~~v~~g~~  213 (290)
                      .    .......++.++..|  +++.++..
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred             hhcccccccccccccccccccccceeeecc
Confidence            4    234556666665443  77777643

...

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.02  E-value=0.0039  Score=52.35  Aligned_cols=135  Identities=19%  Similarity=0.337  Sum_probs=75.8

Q ss_pred             cceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879           64 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus        64 ~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      |.+|-.-+...+..+.+++.|-..-.. +-..++.+++.. ..++++||=.|+|+ |.+++.-++ +|++.|++++-++.
T Consensus       120 w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~  195 (295)
T PF06325_consen  120 WEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPL  195 (295)
T ss_dssp             T----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCH
T ss_pred             CcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHH
Confidence            444422244556778888777766433 112233344432 57888999888754 555554444 59989999999988


Q ss_pred             HHHHHHH---c-CC-CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH---HHHHHHHHhccCCEEEEeccCC
Q 022879          144 RLSVAKE---I-GA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       144 ~~~~~~~---l-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ..+.+++   + +. ..+... . ..+.          ...+||+|+-+.-.+-   ..+...+.++++|.++.-|...
T Consensus       196 Av~~a~~N~~~N~~~~~~~v~-~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~  262 (295)
T PF06325_consen  196 AVEAARENAELNGVEDRIEVS-L-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILE  262 (295)
T ss_dssp             HHHHHHHHHHHTT-TTCEEES-C-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEG
T ss_pred             HHHHHHHHHHHcCCCeeEEEE-E-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccH
Confidence            7666543   2 21 122111 1 1111          1257999998877532   3344566788999999988543

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.011  Score=48.88  Aligned_cols=82  Identities=17%  Similarity=0.218  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +.   .+.. ..+..+-.++ +..+.+++..+ .-+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE-AFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4789999988 9999999999888999 678888887665433 22   2321 2222222222 23333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.01  Score=48.48  Aligned_cols=78  Identities=24%  Similarity=0.359  Sum_probs=52.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ++.+++|+|+ |.+|...++.+...|. .|+.+++++++.+.+ +.++.. .+..+-.+.+   .+.+..+. ..++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~-~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVGDDA---AIRAALAA-AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHH---HHHHHHHH-hCCCCEE
Confidence            4679999988 9999999999999999 588888887766544 334433 3322222221   23333222 3469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            999974

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.98  E-value=0.0076  Score=49.86  Aligned_cols=130  Identities=15%  Similarity=0.243  Sum_probs=88.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC---------CCcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS---------TNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~---------~~~~~~~~~~~~~~~~~  177 (290)
                      ++.++|+.|.|.+|+.++..++..|+ .|..-+....+.+-.+.+|+...-.-+         .-+++|.+.-.++....
T Consensus       163 ~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~~  241 (356)
T COG3288         163 SPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAEQ  241 (356)
T ss_pred             cchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHHH
Confidence            56788999999999999999999999 676666777776767767754322111         12345555555554456


Q ss_pred             CCCccEEEEccCCH------HHHHHHHHHhccCCEEEEeccCC-CCc--cccchhhhccCcEEEEeeec
Q 022879          178 GTGIDVSFDCAGLN------KTMSTALGATCAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       178 ~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~  237 (290)
                      -+++|+||-+.-.|      -....++..++|++.++.+.... +..  +-+-.-...+.++|+|..+.
T Consensus       242 ~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl  310 (356)
T COG3288         242 AKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL  310 (356)
T ss_pred             hcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence            67899999976432      13457889999999999987432 211  22223345678899998654

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.04  Score=45.04  Aligned_cols=104  Identities=22%  Similarity=0.231  Sum_probs=59.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +++++||+|+ |.+|...++.+...|. .|+.+.++. ++.+ ..   +..+.. ..+..+-. .++..+.++++.+ ..
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE-EF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hC
Confidence            4678999988 9999999998888899 466665643 2222 22   222322 12222222 2233333333322 22


Q ss_pred             CCccEEEEccCCH-------------------HHHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLN-------------------KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .++|+++.+.|..                   ..++.+...+...|+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            4699999888642                   123334444555688888864

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.014  Score=48.57  Aligned_cols=81  Identities=28%  Similarity=0.297  Sum_probs=52.4

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +.++||+|+ |++|...++.+...|+ .++.+++++++.+.+ +.++....+..+-. .+++.+.++++.+. -.++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            578999988 9999999998888899 577777887776543 44542222322222 23333334444332 2579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999874

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.93  E-value=0.023  Score=44.56  Aligned_cols=101  Identities=20%  Similarity=0.283  Sum_probs=60.2

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ..++++++||..|+|+-+ .+..+++.. +...+++++.+++.    +..+.. ++..+..+....+.+.+.  ....++
T Consensus        28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~--~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRER--VGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHH--hCCCCc
Confidence            567899999999987744 344444443 43469999998764    112332 222222222222222222  235579


Q ss_pred             cEEEEcc-----CC------------HHHHHHHHHHhccCCEEEEec
Q 022879          182 DVSFDCA-----GL------------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       182 d~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |+|+...     |.            ...+..+.+.|+++|+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            9999531     21            246777899999999998754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.93  E-value=0.016  Score=48.02  Aligned_cols=82  Identities=22%  Similarity=0.269  Sum_probs=53.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. .++.. ..+..+- +.++..+.+++..+. .+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4679999987 9999999999888999 5788888877765543 34421 2222222 222333444444332 34699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99999884

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.011  Score=47.73  Aligned_cols=78  Identities=19%  Similarity=0.246  Sum_probs=50.7

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      ++++|+|+ |++|...++.+...|+ .|+.+++++++.+.++.++....+..+-.+. ++.+.++++   .+.++|++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence            47899987 9999999988888899 6888888877666555554333333222222 222222222   2347999999


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            8864

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.018  Score=48.59  Aligned_cols=82  Identities=23%  Similarity=0.283  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +.   .+.. ..+..+-.+ +++.+.++++.+ .-+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK-RIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4578999987 9999999998888899 688888887765433 22   2322 222222222 233333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.018  Score=48.75  Aligned_cols=81  Identities=31%  Similarity=0.459  Sum_probs=53.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EE----EecCCCcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~----~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      +++++||+|+ |++|..+++.+...|+ .|+.+++++++.+. .+.++.. .+    .|. .+.++..+.++++.+. .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVER-FG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHH-cC
Confidence            5789999988 9999999999999999 58888888776553 3455421 11    222 1222333334443322 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.017  Score=47.46  Aligned_cols=82  Identities=22%  Similarity=0.256  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.++++++..+...++....  .+..+-. .+++.+.+.++.+. ..++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999988 9999999998888999 5888888776655555443221  2222222 22233333333222 24699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99999975

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.86  E-value=0.0066  Score=43.00  Aligned_cols=93  Identities=29%  Similarity=0.372  Sum_probs=62.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHH-c---C-CCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKE-I---G-ADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~-l---g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      |+.+||-.|+|. |..++.+++. .++ .+++++.+++..+.+++ .   + .+.+....   .++ ...    .....+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~~----~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EFD----PDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HGG----TTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-ccC----cccCCC
Confidence            678999998876 7788888884 677 79999999998887754 2   2 12221111   222 111    123457


Q ss_pred             ccEEEEcc-CC---HH------HHHHHHHHhccCCEEEE
Q 022879          181 IDVSFDCA-GL---NK------TMSTALGATCAGGKVCL  209 (290)
Q Consensus       181 ~d~vid~~-g~---~~------~~~~~~~~l~~~G~~v~  209 (290)
                      ||+|+... ..   ..      .+..+.+.|+|+|+++.
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            99999877 21   12      37788899999999875

...

>PRK06484 short chain dehydrogenase; Validated

Probab=96.85  E-value=0.043  Score=50.33  Aligned_cols=105  Identities=22%  Similarity=0.252  Sum_probs=66.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. .++... .+..+-.+ ++..+.+++..+ .-+.+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA-RWGRLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            5788999987 9999999998888999 6888888877766543 354322 22222222 233333443332 234699


Q ss_pred             EEEEccCCHH--------------------------HHHHHHHHhccCCEEEEeccC
Q 022879          183 VSFDCAGLNK--------------------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       183 ~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++|++.|...                          ..+.++..++.+|+++.++..
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            9999987420                          122244555567899988753

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.84  E-value=0.02  Score=49.73  Aligned_cols=98  Identities=17%  Similarity=0.214  Sum_probs=63.6

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+|||.|+|.+|+.+++.+...|-..|...+++.++.+.+....  .-..+..+..  + .+.+.++.    +++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~--d-~~al~~li----~~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAA--D-VDALVALI----KDFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEeccc--C-hHHHHHHH----hcCCEEEE
Confidence            47899999999999999988888447999999988888776653  1122222221  1 12333332    34699999


Q ss_pred             ccCCHHHHHHHH-HHhccCCEEEEeccCC
Q 022879          187 CAGLNKTMSTAL-GATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~~~~~~-~~l~~~G~~v~~g~~~  214 (290)
                      +.+..-.. .++ .+++.+=.++......
T Consensus        75 ~~p~~~~~-~i~ka~i~~gv~yvDts~~~  102 (389)
T COG1748          75 AAPPFVDL-TILKACIKTGVDYVDTSYYE  102 (389)
T ss_pred             eCCchhhH-HHHHHHHHhCCCEEEcccCC
Confidence            99974333 444 4555555666665433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.84  E-value=0.024  Score=46.42  Aligned_cols=82  Identities=16%  Similarity=0.267  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      +++++||+|+ |++|..+++.+...|+ .++.+++++++.+..    +..+.. ..+..+-.+ +++.+.++++.+ ...
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAE-DFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            4679999988 9999999999998999 578888887654432    223432 222222222 233333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|.+|++.|.
T Consensus        82 ~id~vi~~ag~   92 (253)
T PRK08217         82 QLNGLINNAGI   92 (253)
T ss_pred             CCCEEEECCCc
Confidence            68999999873

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.017  Score=47.54  Aligned_cols=81  Identities=25%  Similarity=0.256  Sum_probs=51.2

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCC-CEEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      ++++||+|+ +++|...++.+...|+ .|+++++++++.+.+.    ..+. ...+..+-. .+++.+.+.++.+. .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            468999987 9999999999999999 6888888776554332    2221 122322222 22333334443332 246


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            9999999874

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.84  E-value=0.024  Score=46.39  Aligned_cols=82  Identities=18%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~  181 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++.  ..+.++.++.. ..+..+-. .+++...+++..+ ...++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVE-EFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-HcCCC
Confidence            4789999988 9999999998888999 5777766542  22333444432 22222222 2233333333322 23469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.81  E-value=0.011  Score=45.13  Aligned_cols=81  Identities=22%  Similarity=0.297  Sum_probs=50.8

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC--hhHHH-HHHH---cCCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLS-VAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~-~~~~---lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      +++||+|+ +++|...++.+-..|..+++.+.++  .++.+ +.++   .+.. .++..+- ..++..+.++++. ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI-KRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH-HHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence            47899987 9999998887777777788888888  33333 3333   3421 2222222 2233444444443 2346


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|++|.+.|.
T Consensus        80 ~ld~li~~ag~   90 (167)
T PF00106_consen   80 PLDILINNAGI   90 (167)
T ss_dssp             SESEEEEECSC
T ss_pred             ccccccccccc
Confidence            79999999886

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.017  Score=46.81  Aligned_cols=81  Identities=22%  Similarity=0.263  Sum_probs=49.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +++++||+|+ |.+|..+++.+...|+ .|+.+++++++.. .++.   .+.. .+..+- ..+++.+.+++..+.. .+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~-~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQF-GR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            3689999988 9999999998888899 5888878665432 2222   2322 222221 1223333333333222 47


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            9999998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.022  Score=47.61  Aligned_cols=82  Identities=22%  Similarity=0.132  Sum_probs=52.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |.+|.+.++.+...|. .|+++++++++.+.+......  ..+..+-.+ ++..+.+++..+ .-.++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEA-TFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHH-HhCCCC
Confidence            3578999988 9999999998888899 588888888776655443211  122222222 223333333322 224699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999885

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.79  E-value=0.022  Score=50.40  Aligned_cols=75  Identities=16%  Similarity=0.255  Sum_probs=53.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .+.++||.|+|.+|.+++..+...|+..++++.++.++.+ +++.++...++.       + +.+.+.    -..+|+||
T Consensus       180 ~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~----l~~aDiVI  247 (414)
T PRK13940        180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQL----IKKADIII  247 (414)
T ss_pred             cCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHH----hccCCEEE
Confidence            5789999999999999999999999888888888877654 445565222222       1 122221    14589999


Q ss_pred             EccCCHHH
Q 022879          186 DCAGLNKT  193 (290)
Q Consensus       186 d~~g~~~~  193 (290)
                      +|++.+..
T Consensus       248 ~aT~a~~~  255 (414)
T PRK13940        248 AAVNVLEY  255 (414)
T ss_pred             ECcCCCCe
Confidence            99998643

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.022  Score=46.54  Aligned_cols=82  Identities=24%  Similarity=0.299  Sum_probs=51.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++.++||+|+ |.+|...++.+...|+ .++.+++++++.+ ..++++... .+..+-.+ ++..+.++.+.+ ...++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence            4679999988 9999999999999999 5788877766544 334455332 22222111 222222233322 235799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.016  Score=47.90  Aligned_cols=83  Identities=20%  Similarity=0.256  Sum_probs=52.8

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      -++.++||+|+ |.+|...++.+...|. .|+.+.++++..+.+. .+...  ..+..+-.+ +++.+.+++..+. -.+
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence            46789999988 9999999999999999 5888878776555433 33322  222222222 2233333333222 247


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|.||++.|.
T Consensus        87 ~d~vi~~ag~   96 (264)
T PRK12829         87 LDVLVNNAGI   96 (264)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.79  E-value=0.034  Score=44.99  Aligned_cols=104  Identities=26%  Similarity=0.383  Sum_probs=71.8

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +...++.+|++|+=.|.|+ |.+++.|+++.|. ..++..+..++..+.++    .++....+.+  ...|..+..    
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~--~~~Dv~~~~----  159 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTL--KLGDVREGI----  159 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEE--Eeccccccc----
Confidence            3457899999999988877 8899999998877 47899988888777664    3443332221  112222211    


Q ss_pred             HHhCCCccEEE-EccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                        .+..+|.+| |.-..-+.+..+.+.|+++|.++.+.+
T Consensus       160 --~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         160 --DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             --cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence              234788875 444444678889999999999998864

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.78  E-value=0.019  Score=50.30  Aligned_cols=99  Identities=23%  Similarity=0.277  Sum_probs=68.4

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      +...++++++||-.|+|. |..+..+++..|+ .|++++.+++..+.+++......+.+.  ..++    .++    .+.
T Consensus       161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~----~~l----~~~  228 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDY----RDL----NGQ  228 (383)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECch----hhc----CCC
Confidence            446789999999998864 7788888888888 699999999999988764322111111  1122    111    346


Q ss_pred             ccEEEEc-----cCC---HHHHHHHHHHhccCCEEEEec
Q 022879          181 IDVSFDC-----AGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       181 ~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ||.|+..     +|.   +..+..+.+.|+|+|.++...
T Consensus       229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            9998643     343   245777888999999998754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.021  Score=47.17  Aligned_cols=82  Identities=17%  Similarity=0.260  Sum_probs=49.9

Q ss_pred             CCCeEEEECCC---HHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Gag---~vG~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|++   ++|.+.++.+...|+ .|+.++++++..    +..++++....+..+-. .++..+.+++..+.. 
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence            46899999873   899999998888999 466666665432    22233443333333322 223333333333322 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +.+|+++++.|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            469999999874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.78  E-value=0.031  Score=46.33  Aligned_cols=103  Identities=21%  Similarity=0.357  Sum_probs=70.5

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      +++.++++|.++|=.|+|- |.+++-.|+..|+ .|++++-|++..+.+++    .|...-+.  -...++.+    +  
T Consensus        65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~--v~l~d~rd----~--  134 (283)
T COG2230          65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVE--VRLQDYRD----F--  134 (283)
T ss_pred             HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccE--EEeccccc----c--
Confidence            4568999999999999876 7788899999999 69999999998887754    44331111  01112211    1  


Q ss_pred             HhCCCccEEE-----EccCC---HHHHHHHHHHhccCCEEEEeccCC
Q 022879          176 AMGTGIDVSF-----DCAGL---NKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       176 ~~~~~~d~vi-----d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                        ...||-|+     +.+|.   +.-+..+.+.|+++|++.+.....
T Consensus       135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence              22377774     35554   245667888999999998876443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.77  E-value=0.02  Score=47.72  Aligned_cols=82  Identities=18%  Similarity=0.250  Sum_probs=50.0

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +++++||+|+ +  ++|.+.++.+...|+ .|+.+.++++..+    ..++++....+..|-. .++..+.+++..+. -
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence            4678999988 4  899999998888999 5666666543222    2233453333332222 22333334443322 2


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +.+|+++++.|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            479999999884

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.77  E-value=0.044  Score=43.66  Aligned_cols=101  Identities=17%  Similarity=0.202  Sum_probs=66.5

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCC---EEEecCCCcccHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGAD---NIVKVSTNLQDIAEEV  170 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~---~~~~~~~~~~~~~~~~  170 (290)
                      +++...++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.++    ..+..   .++.-     +..+.+
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-----d~~~~~  137 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-----DGKRGL  137 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-----CcccCC
Confidence            34556778899999998866 777777887764 237999999988766554    34432   22221     111101


Q ss_pred             HHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       171 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                           .....||.|+-+.........+.+.|+++|+++..
T Consensus       138 -----~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        138 -----EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             -----ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence                 01247999987766545556788999999999764

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.021  Score=46.94  Aligned_cols=82  Identities=27%  Similarity=0.330  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ +.+   +.. ..+..+- ..++..+.++++.+.. +
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-G   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            4789999988 9999999999989999 577777877665433 222   321 1222222 2223333344433222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.76  E-value=0.041  Score=50.33  Aligned_cols=44  Identities=20%  Similarity=0.204  Sum_probs=36.5

Q ss_pred             cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 022879          103 ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  147 (290)
Q Consensus       103 ~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  147 (290)
                      .+.+.|+++||.|+ |.+|..+++.+...|+ .|+++.++.++.+.
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~  119 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES  119 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            56678999999998 9999999999888899 57777788776543

>PRK06196 oxidoreductase; Provisional

Probab=96.75  E-value=0.017  Score=49.30  Aligned_cols=82  Identities=20%  Similarity=0.284  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+.++||+|+ |++|..++..+...|+ .|+.+++++++.+. .+.+..-..+..+-. .++..+.+.++.+ ...++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence            4679999988 9999999998888899 57777787766543 333332223322222 2223333333322 2357999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.027  Score=46.60  Aligned_cols=84  Identities=27%  Similarity=0.360  Sum_probs=52.2

Q ss_pred             CCCCCeEEEECC-C-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----H-cCCCEE--EecCCCcc-cHHHHHHHHH
Q 022879          105 IGPETNVLIMGA-G-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----E-IGADNI--VKVSTNLQ-DIAEEVEKIQ  174 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~-lg~~~~--~~~~~~~~-~~~~~~~~~~  174 (290)
                      +..++++||+|+ | ++|.+.++.+...|+ .|+.+++++++.+...    . ++...+  +..+-.+. +....+++..
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            345789999987 6 799999999999999 5777777776554332    1 343222  22222222 2333333332


Q ss_pred             HHhCCCccEEEEccCC
Q 022879          175 KAMGTGIDVSFDCAGL  190 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~  190 (290)
                      + ..+++|++|++.|.
T Consensus        93 ~-~~g~id~li~~ag~  107 (262)
T PRK07831         93 E-RLGRLDVLVNNAGL  107 (262)
T ss_pred             H-HcCCCCEEEECCCC
Confidence            2 22479999999984

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.74  E-value=0.0045  Score=51.55  Aligned_cols=99  Identities=23%  Similarity=0.383  Sum_probs=59.5

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++++++++|++||-.|+|- |..++.+++..|+ .|++++.+++..+++++    .|....+.+.  ..++.    ++  
T Consensus        55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~--~~D~~----~~--  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVR--LQDYR----DL--  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEE--ES-GG----G---
T ss_pred             HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEE--Eeecc----cc--
Confidence            4558899999999999874 6678888888899 69999999998887753    4522111110  11221    11  


Q ss_pred             HhCCCccEEEE-----ccCC---HHHHHHHHHHhccCCEEEEe
Q 022879          176 AMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       176 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~  210 (290)
                        ...||.|+.     .+|.   +..+..+.+.|+|+|+++.-
T Consensus       125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence              237999855     4443   24577888999999999754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.73  E-value=0.02  Score=45.98  Aligned_cols=98  Identities=24%  Similarity=0.273  Sum_probs=64.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -+|.+||=.|+|+ |+++..+|+. |+ .|.+++-+++..+.++.-....-+..+.. ..   .++++.. .++.||+|+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~-~~---~~edl~~-~~~~FDvV~  129 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYR-QA---TVEDLAS-AGGQFDVVT  129 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccch-hh---hHHHHHh-cCCCccEEE
Confidence            4788999988855 5666666554 78 79999999999999875432222221111 11   2344432 347899997


Q ss_pred             E-----ccCCH-HHHHHHHHHhccCCEEEEec
Q 022879          186 D-----CAGLN-KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       186 d-----~~g~~-~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .     .+..+ ..+..+.+.++|+|.++.--
T Consensus       130 cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST  161 (243)
T COG2227         130 CMEVLEHVPDPESFLRACAKLVKPGGILFLST  161 (243)
T ss_pred             EhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence            5     34433 35667999999999887653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.69  E-value=0.028  Score=46.51  Aligned_cols=81  Identities=26%  Similarity=0.235  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++++++|+|+ |++|...++.+...|+ .|+.+++++++.+.+.. .+.. ..+..+- ..++..+.++++.+. -+.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            4689999988 9999999998888999 57788887776655543 3321 1222121 122333334443322 24689


Q ss_pred             EEEEccC
Q 022879          183 VSFDCAG  189 (290)
Q Consensus       183 ~vid~~g  189 (290)
                      ++|++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.027  Score=46.03  Aligned_cols=82  Identities=22%  Similarity=0.212  Sum_probs=51.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC--C-CEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG--A-DNIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      ++.++||+|+ |.+|...++.+...|. .|+.+++++++.+.+ +.+.  . ...+..+- ..+++...+++... ...+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALE-RFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence            4578999988 9999999998888899 488888887665443 3332  1 11222222 22233333333322 2346


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.025  Score=46.85  Aligned_cols=82  Identities=22%  Similarity=0.293  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCEE--EecCCCc-ccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADNI--VKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~--~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.. +++    +...+  +..+-.+ ++..+.++++.+. 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR-   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4679999988 9999999999999999 577888887665432 222    11122  2222222 2333333333222 


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|++++++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            3469999999984

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=96.68  E-value=0.026  Score=47.07  Aligned_cols=101  Identities=16%  Similarity=0.157  Sum_probs=66.0

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE-
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD-  186 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid-  186 (290)
                      ++|||.|+|. |..+=++++....+++++++-+++=.++.+++ +....-..+.+-+=......++.+....+||+||- 
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D  156 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD  156 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence            6999997655 55777888988888999999999988888773 32110000111111112233333334458999854 


Q ss_pred             ccCC---------HHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGL---------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~---------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +...         .+..+.+.++|+++|.++.-
T Consensus       157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            4332         34677899999999999887

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.68  E-value=0.011  Score=49.06  Aligned_cols=97  Identities=18%  Similarity=0.263  Sum_probs=70.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +..+|.|.|+|.+|.-++.+|.-+|+ .|...+.+..|+..++.+-..++..+.+...++.+.+        .+.|++|.
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg  237 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG  237 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence            44577888999999999999999999 5888999999998887755444433333333333322        45899998


Q ss_pred             ccCCH------HHHHHHHHHhccCCEEEEecc
Q 022879          187 CAGLN------KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~------~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ++-.+      -...+.++.|+|++.++.+.-
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence            76332      246678999999999998763

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.1  Score=43.36  Aligned_cols=79  Identities=24%  Similarity=0.357  Sum_probs=48.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE--EEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~  181 (290)
                      +++|+|+ |++|..+++.+...|+ .|+.+++++++.+..    +..+...  .+..+-. .++..+...++.+ ...++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA-AHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH-hcCCC
Confidence            6899987 9999999998888999 577777776654332    2233321  1111211 2223333333322 23569


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999999974

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.67  E-value=0.042  Score=41.55  Aligned_cols=95  Identities=19%  Similarity=0.257  Sum_probs=61.7

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..-.|++++|.|=|.+|.-.++.++.+|+ +|++++.++.+.-.+..-|.. +.       +    +.+.    -...|+
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~----~~~a----~~~adi   81 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------T----LEEA----LRDADI   81 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE------------HHHH----TTT-SE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------C----HHHH----HhhCCE
Confidence            35688999999999999999999999999 699999999776655555543 21       1    2221    235799


Q ss_pred             EEEccCCHHH-HHHHHHHhccCCEEEEeccCCC
Q 022879          184 SFDCAGLNKT-MSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       184 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      +|.++|.... -..-++.|+++..+...|....
T Consensus        82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~  114 (162)
T PF00670_consen   82 FVTATGNKDVITGEHFRQMKDGAILANAGHFDV  114 (162)
T ss_dssp             EEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred             EEECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence            9999997553 3467788887777777775443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.67  E-value=0.053  Score=43.10  Aligned_cols=35  Identities=43%  Similarity=0.563  Sum_probs=31.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|..+++.+...|...+..++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45789999999999999999999999888888766

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.67  E-value=0.097  Score=41.67  Aligned_cols=93  Identities=16%  Similarity=0.111  Sum_probs=59.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|.+|||.|+|.+|..-++.+...|+ .|.+++.... ....+.+.+.-..+.   .  ++..  ..     -.++++||
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~---~--~~~~--~d-----l~~~~lVi   74 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA---R--CFDA--DI-----LEGAFLVI   74 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe---C--CCCH--HH-----hCCcEEEE
Confidence            46799999999999999999999999 5777655432 222222333211221   1  1111  11     14689999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      -+++.++.-.......+..|..+..-.
T Consensus        75 ~at~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        75 AATDDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence            999986555566666777788776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.032  Score=45.65  Aligned_cols=82  Identities=24%  Similarity=0.321  Sum_probs=50.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |.+|...++.+...|+ .++.+++++++.+.+ +.+   +.. ..+..+-.+ +++.+..+++.+.. .
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-G   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence            4678999988 9999999998888898 588888876654322 222   211 222222222 22333333333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.64  E-value=0.033  Score=45.83  Aligned_cols=82  Identities=17%  Similarity=0.280  Sum_probs=50.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-. .+++.+.+++..+ .-.
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            4689999987 9999999998888899 577787877654322 2   22321 12222222 2233333333322 235


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999999975

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.64  E-value=0.029  Score=46.44  Aligned_cols=82  Identities=16%  Similarity=0.223  Sum_probs=48.5

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +  ++|.+.++.+...|+ .|+.+.++++..+.+    ++++....+..|-. .++..+.+++..+.. 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~-   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW-   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc-
Confidence            5678999987 4  799999888888899 466666664322222    23343333222222 233333444433322 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +.+|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (260)
T PRK06603         85 GSFDFLLHGMAF   96 (260)
T ss_pred             CCccEEEEcccc
Confidence            469999998873

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.034  Score=45.70  Aligned_cols=82  Identities=20%  Similarity=0.175  Sum_probs=51.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|...++.+...|+ .++.+++++++.+.+ +   ..+.. ..+..+-.+ ++..+.++++.+. -+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            4678999987 9999999998888999 577777877665533 2   22322 222222222 2233333333322 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|++|++.|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK08589 short chain dehydrogenase; Validated

Probab=96.62  E-value=0.032  Score=46.49  Aligned_cols=82  Identities=24%  Similarity=0.381  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++++..+..+++   +.. ..+..+- ..++..+.++++.+.. ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            4679999988 9999999998888899 577777774433334333   321 2222222 2223333344443322 46


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            9999999874

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.031  Score=46.10  Aligned_cols=83  Identities=22%  Similarity=0.266  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+++++|+|+ |++|...++.+...|++.|+.+++++++..    .++..+... .+..+-.+ +++.+.++...+.. +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-G   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5678999988 999999999999999964788877765544    222334321 12222222 22333333332222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>PRK06128 oxidoreductase; Provisional

Probab=96.62  E-value=0.095  Score=44.36  Aligned_cols=82  Identities=23%  Similarity=0.234  Sum_probs=47.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--H----HHHHHHcCCCE-EEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--R----LSVAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~----~~~~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|.+.++.+...|++ |+.+..+.+  .    .+.++..+... .+..+-. .++..+.+++..+. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE-  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence            4679999987 99999999988889995 555544322  1    12233334322 2222222 22333333333322 


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|++|++.|.
T Consensus       132 ~g~iD~lV~nAg~  144 (300)
T PRK06128        132 LGGLDILVNIAGK  144 (300)
T ss_pred             hCCCCEEEECCcc
Confidence            2469999999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.035  Score=44.94  Aligned_cols=82  Identities=16%  Similarity=0.221  Sum_probs=52.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      .+++++|.|+ +++|.+.+..+...|+ .|+.+.+++++.+.+    ++.+... .+..+- ..++..+.+++..+..+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999988 9999999988888899 577777877765432    2334321 222222 223333334444333343


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      .+|++|++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            7999999986

>PRK07574 formate dehydrogenase; Provisional

Probab=96.59  E-value=0.055  Score=47.34  Aligned_cols=92  Identities=21%  Similarity=0.258  Sum_probs=63.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|+..++.++.+|+ .|.+.+++....+..+.++...   +    .+    ++++.    ...|+|+-
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI  254 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence            56789999999999999999999999 6888887764444444555321   1    12    22222    34799988


Q ss_pred             ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKTM-----STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +.......     ...+..|+++..+|.++...
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence            87754322     24677889999999887654

>PRK06194 hypothetical protein; Provisional

Probab=96.58  E-value=0.04  Score=46.19  Aligned_cols=82  Identities=23%  Similarity=0.325  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.. +++   +.. ..+..+-.+ +++.+.++.+.+ ...
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            3578999987 9999999998888899 577787776554322 222   322 122222222 223333333322 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            68999999885

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.58  E-value=0.035  Score=47.49  Aligned_cols=81  Identities=22%  Similarity=0.363  Sum_probs=50.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC---CC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIG---AD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg---~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      ++.+++|+|+ |++|...++.+...|+ .|+.+++++++.+. .+++.   .. ..+..+- +.++..+.++++. ....
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~-~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR-ALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH-HhCC
Confidence            4678999987 9999999998888898 57778787766543 33332   11 1222221 1222333333332 2345


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|++|++.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999987

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.039  Score=45.62  Aligned_cols=81  Identities=25%  Similarity=0.344  Sum_probs=50.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc--C-CCEEEecCCCcc-cHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI--G-ADNIVKVSTNLQ-DIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l--g-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  180 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+++++++++.+.+. ++  + ....+..+-.+. +..+..+.+.+  .++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            4678999987 9999999998888999 5888888877655442 22  2 112222222222 22222222221  357


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|.++++.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.57  E-value=0.046  Score=44.32  Aligned_cols=106  Identities=25%  Similarity=0.396  Sum_probs=74.7

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ....+|++||=.|+|. |-.++.+++..|...+++++-++..++.+++    .+... +.+-..  +    .+++ .-.+
T Consensus        47 ~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~--d----Ae~L-Pf~D  117 (238)
T COG2226          47 LGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG--D----AENL-PFPD  117 (238)
T ss_pred             hCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe--c----hhhC-CCCC
Confidence            4556899999987765 8899999999986689999999999887765    22221 111110  1    1111 1245


Q ss_pred             CCccEEEEccCC------HHHHHHHHHHhccCCEEEEeccCCCCc
Q 022879          179 TGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHHEM  217 (290)
Q Consensus       179 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~  217 (290)
                      +.||++.-+.|-      +..+.++.+.|+|+|+++.+.......
T Consensus       118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~  162 (238)
T COG2226         118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN  162 (238)
T ss_pred             CccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence            679999776665      357899999999999999887665443

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.042  Score=45.53  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=50.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      +++++||+|+ |++|...++.+...|+ .|+.+++++++.+.. +.   .+.. ..+..+-. .+++.+.+++.... .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999988 9999999998888999 588887776654322 22   2222 22222222 22333334443322 24


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|++|++.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            6999999876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.56  E-value=0.032  Score=46.03  Aligned_cols=82  Identities=28%  Similarity=0.319  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCCE-EEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +++++||+|+ |.+|.+.++.+...|+ .|+.+++++...+..+++   +... .+..+- ..++..+.++++.+. -++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999988 9999999998888999 577777775433333333   3221 122221 122333344443322 346


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++++++|.
T Consensus        85 id~lv~nAg~   94 (260)
T PRK12823         85 IDVLINNVGG   94 (260)
T ss_pred             CeEEEECCcc
Confidence            9999999873

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.56  E-value=0.038  Score=45.46  Aligned_cols=81  Identities=22%  Similarity=0.255  Sum_probs=48.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+.+++|+|+ |++|...++.+...|++ ++.+ .++++..+.++..+.. .+..+- ..++..+.++++.+ .-+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEK-EFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4678999987 99999999988888995 5554 3444444444433322 222222 22333334444332 2346999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.54  E-value=0.044  Score=45.25  Aligned_cols=79  Identities=30%  Similarity=0.318  Sum_probs=49.5

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCEEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+....+..+- +.++..+.+++..+ .-+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~-~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWE-LLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHH-hcCCCCE
Confidence            6899987 9999999998888899 578888877664432 22   23222333322 22233333333332 2347999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9999874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.043  Score=45.86  Aligned_cols=105  Identities=18%  Similarity=0.234  Sum_probs=63.8

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChh---HHH-HHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLS-VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+   +++|.+.++.+...|+ .|+.+.++++   +.+ ..++++....+..+-.+ ++..+.++++.+. .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4689999986   4899999998888999 5777767642   222 22445533333332222 2333344443332 3


Q ss_pred             CCccEEEEccCCH--------------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          179 TGIDVSFDCAGLN--------------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       179 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +++|+++++.|..              +               ..+..+..+..+|+++.++..
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~  145 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL  145 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence            5799999999841              1               122355566677999988753

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.042  Score=45.38  Aligned_cols=82  Identities=22%  Similarity=0.315  Sum_probs=50.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      .+.++||+|+ |.+|...++.+...|+ .|+.++++++..+..+++   +.. ..+..+-.+ ++..+.+.++.+ .-.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE-KEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            4678999987 9999999998888999 588887776544443332   322 122222222 223333333322 2356


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            9999999884

>PRK08643 acetoin reductase; Validated

Probab=96.53  E-value=0.041  Score=45.22  Aligned_cols=81  Identities=21%  Similarity=0.275  Sum_probs=50.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      ++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ ..   .+.. ..+..+-. .++..+.++++.+ .-++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD-TFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            568999987 9999999999888999 588887877654433 22   2222 12222221 2233333333332 2356


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.52  E-value=0.048  Score=46.43  Aligned_cols=91  Identities=26%  Similarity=0.302  Sum_probs=60.4

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      .+|.|.|+|.+|.+.+..++..|. ..|++.++++++.+.+++.|......     .+..+.        -...|+||.|
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~--------~~~aDvViia   73 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEA--------VKGADLVILC   73 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHH--------hcCCCEEEEC
Confidence            579999999999999998888885 36888899998888888777432111     111111        1358999999


Q ss_pred             cCCHHH---HHHHHHHhccCCEEEEecc
Q 022879          188 AGLNKT---MSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       188 ~g~~~~---~~~~~~~l~~~G~~v~~g~  212 (290)
                      +.....   +......++++..++.++.
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            986322   2233344566666666654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.52  E-value=0.045  Score=45.12  Aligned_cols=82  Identities=23%  Similarity=0.272  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+...    ..+.. ..+..+-. .+++.+.+.++.+. ..
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4689999987 9999999998888999 5788878776654432    22221 12222222 22333333333322 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|.+|.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.52  E-value=0.095  Score=43.28  Aligned_cols=81  Identities=15%  Similarity=0.236  Sum_probs=47.1

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHHcCCC--EEEecCC-CcccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLS-VAKEIGAD--NIVKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~--~~~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      .+++++|+|+   +++|.+.++.+...|+ .|+.+.++.   ++.+ ..+++...  ..+..|- +.++..+.++++.+.
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            4688999986   5999999988888899 466664432   2333 33334211  1222222 223333344443322


Q ss_pred             hCCCccEEEEccC
Q 022879          177 MGTGIDVSFDCAG  189 (290)
Q Consensus       177 ~~~~~d~vid~~g  189 (290)
                      . +++|+++++.|
T Consensus        85 ~-g~ld~lv~nag   96 (257)
T PRK08594         85 V-GVIHGVAHCIA   96 (257)
T ss_pred             C-CCccEEEECcc
Confidence            2 46999999886

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.037  Score=45.57  Aligned_cols=82  Identities=23%  Similarity=0.212  Sum_probs=51.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      ++.++||+|+ |.+|...++.+...|++ ++.+++++++.+..+.+   +.. ..+..+-. .+++...++++... ..+
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence            4679999988 99999999888888995 66676777665444332   322 22222222 22233333333322 247


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999984

>PRK00811 spermidine synthase; Provisional

Probab=96.52  E-value=0.022  Score=47.86  Aligned_cols=100  Identities=18%  Similarity=0.164  Sum_probs=64.6

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-------CEEEecCCCcccHHHHHHHHHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA-------DNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ...+++||+.|+|. |..+..+++..+...+++++-+++-.+.+++. ..       +.-+.+  ...|..+.+    ..
T Consensus        74 ~~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v--~~~Da~~~l----~~  146 (283)
T PRK00811         74 HPNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVEL--VIGDGIKFV----AE  146 (283)
T ss_pred             CCCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEE--EECchHHHH----hh
Confidence            35678999998866 66777888877777899999999988888763 10       110110  012222222    22


Q ss_pred             hCCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+.+|+||-....          .+.+..+.+.|+++|.++.-.
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            35679999864321          234567788999999998753

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.046  Score=46.66  Aligned_cols=82  Identities=18%  Similarity=0.257  Sum_probs=49.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CC-C-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----GA-D-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~-~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .+++++|+|+ +++|.+.++.+...|+ .|+.+.+++++.+. ++++    +. . ..+..+-. .++..+..+++.+ .
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence            4689999988 9999999998888899 57777787765432 2222    11 1 12222221 2223233333322 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      ..++|++|+++|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence            3579999998874

>PRK05717 oxidoreductase; Validated

Probab=96.51  E-value=0.046  Score=44.96  Aligned_cols=82  Identities=26%  Similarity=0.278  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |.+|...+..+...|+ .|+.++++.++.+ ..+.++.. ..+..+-.+ .+..+.++++.+.. +++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            4678999987 9999999998888899 5777766655433 33445422 222222222 22333334433222 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.51  E-value=0.1  Score=41.16  Aligned_cols=103  Identities=14%  Similarity=0.288  Sum_probs=61.5

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ....++++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+....   .+..+.+..+   
T Consensus        34 ~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~---  106 (196)
T PRK07402         34 SQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL---  106 (196)
T ss_pred             HhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC---
Confidence            445677888888887654 5566666665433479999999988776643    4543222111   1221212111   


Q ss_pred             hCCCccE-EEEccCC-HHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDV-SFDCAGL-NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ...+|. .++.... ...+..+.+.|+++|+++...
T Consensus       107 -~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 -APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             -CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence             122344 4443222 356788899999999998774

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.044  Score=45.42  Aligned_cols=81  Identities=16%  Similarity=0.227  Sum_probs=51.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc----CCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+. ++    +.. ..+..+-. .++..+.+++..  .-
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~--~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK--NI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH--hh
Confidence            4778999988 9999999999999999 5777888876654332 22    221 22222222 223333333332  22


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            469999999875

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.15  Score=41.54  Aligned_cols=82  Identities=17%  Similarity=0.186  Sum_probs=47.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      ++.++||+|+ |.+|...++.+...|++ ++.+.+ ++++.+ ..   +..+.. ..+..+-. .+++.+.++++.+. -
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            5678999987 99999999999999995 544433 332222 22   223321 22222221 22333333433322 2


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (245)
T PRK12937         82 GRIDVLVNNAGV   93 (245)
T ss_pred             CCCCEEEECCCC
Confidence            469999999884

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.48  E-value=0.048  Score=44.82  Aligned_cols=82  Identities=21%  Similarity=0.261  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++.  ..+.++..+... .+..+- ..++..+.+++..+. -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4689999987 9999999998889999 4666655432  223334454321 222222 223333344443322 3469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999874

>PLN03139 formate dehydrogenase; Provisional

Probab=96.48  E-value=0.078  Score=46.40  Aligned_cols=92  Identities=20%  Similarity=0.216  Sum_probs=63.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|++|.|.|.|.+|...++.++.+|+ .+++.+.+....+..+..+....       .++.    ++.    ...|+|+-
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~----ell----~~sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLD----AML----PKCDVVVI  261 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHH----HHH----hhCCEEEE
Confidence            57799999999999999999999999 57888776544444445553211       1222    222    23788888


Q ss_pred             ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKTM-----STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++......     ...+..|+++..+|.++...
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  294 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARGA  294 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence            77653322     24677889999998887654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.47  E-value=0.043  Score=45.41  Aligned_cols=82  Identities=18%  Similarity=0.244  Sum_probs=48.7

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +++++||+|+   +++|.+.++.+...|+ .|+.+.+.++..+.+++    ++....+..|-. .++..+.+.+..+ ..
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK-HW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH-Hh
Confidence            4678999983   5899999998888999 46665554433333332    343233333322 2233333444333 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            579999999875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.47  E-value=0.011  Score=53.14  Aligned_cols=91  Identities=11%  Similarity=0.151  Sum_probs=57.6

Q ss_pred             cCCCCCCeEE----EECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHH
Q 022879          103 ANIGPETNVL----IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       103 ~~~~~~~~vl----I~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .++++|+++|    |+|+ |++|.+++|+++.+|+ .|+++...+++....+..+.. .+++  .....+.+.+..+.  
T Consensus        29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~~--  103 (450)
T PRK08261         29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKALY--  103 (450)
T ss_pred             cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHHH--
Confidence            5778999988    8865 9999999999999999 477775555543333333333 2333  22223333333221  


Q ss_pred             hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       177 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                                     ......++.|.++|+++.++..
T Consensus       104 ---------------~~~~~~l~~l~~~griv~i~s~  125 (450)
T PRK08261        104 ---------------EFFHPVLRSLAPCGRVVVLGRP  125 (450)
T ss_pred             ---------------HHHHHHHHhccCCCEEEEEccc
Confidence                           3445566777788888888753

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.47  E-value=0.035  Score=48.90  Aligned_cols=93  Identities=23%  Similarity=0.301  Sum_probs=56.9

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH--cC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE--IG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~--lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      |+|.|+|.+|..+++++...+-. .+++.+++.++.+.+..  .+ .......+.  .+.. .+.++.    .+.|+||+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence            68888899999999988877643 68889999999765543  22 112222222  2222 255543    35699999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      |+|.......+-.++..+-.|+..
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CCccchhHHHHHHHHHhCCCeecc
Confidence            999753444455566777788873

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.46  E-value=0.046  Score=44.99  Aligned_cols=82  Identities=15%  Similarity=0.212  Sum_probs=50.3

Q ss_pred             CCCeEEEECCC---HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Gag---~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|++   ++|.+.++.+...|+ .|+.+.++++..+.++++...  ..+..|- +.++..+.+++..+.. +.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence            57899999874   899999998888999 577776765444444544322  1222222 2223333334333222 46


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+++++.|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998874

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.052  Score=44.52  Aligned_cols=82  Identities=15%  Similarity=0.187  Sum_probs=51.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ ++   .+.. ..+..+- ..++..+.++++.+.. +
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            3578999987 9999999999999999 688888876655433 22   2321 2222222 1223333333433222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.049  Score=44.79  Aligned_cols=82  Identities=21%  Similarity=0.185  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +++   +.. ..+..+- ..+++...+++..+.. .
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence            5679999987 9999999999889999 578888877665433 222   221 1222222 2223333333333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|++|++.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999999874

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.45  E-value=0.017  Score=48.43  Aligned_cols=75  Identities=15%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+.+++|.|+|+.+.+++.-+..+|++.+.++.++.+|.+.+ +.++... +...     ++.+.+.+    .-..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~-----~~~~~~~~----~~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRL-----EGDSGGLA----IEKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceec-----cchhhhhh----cccCCCEE
Confidence            578999999999999999999999998898999998776644 4443211 1111     00011111    11468999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |+|++.
T Consensus       195 InaTp~  200 (282)
T TIGR01809       195 VSTVPA  200 (282)
T ss_pred             EECCCC
Confidence            999875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.45  E-value=0.051  Score=44.80  Aligned_cols=82  Identities=18%  Similarity=0.193  Sum_probs=49.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH---HHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS---VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ +++|...++.+...|+ .++.+.++++..+   .....+.. ..+..+-. .++..+.+++..+ ..++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE-EFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            5789999988 9999999999888999 5666666532222   22233322 22222222 2223333444332 2346


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+++++.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.044  Score=44.60  Aligned_cols=83  Identities=22%  Similarity=0.343  Sum_probs=51.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CC-C-EE--EecCC-CcccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GA-D-NI--VKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~-~-~~--~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      ++++++|+|+ |++|...++.+...|+ .|+.+++++++.+.+ +++   +. . ..  .+... ..+++.....++...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4579999987 9999999998888899 588888887665433 222   21 1 11  22211 122333333333332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      ....+|++|++.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            32468999999984

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.061  Score=43.76  Aligned_cols=83  Identities=23%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      ....++||+|+ |.+|..++..+...|. .|+++++++++.+.+.    ..+.. ..+..+-. .+++.+.++++.+ ..
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   81 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE-QF   81 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            34578999987 9999999999988999 6888888876654332    22222 12222221 2233333333332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|+++++.|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            469999999984

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.049  Score=44.59  Aligned_cols=82  Identities=23%  Similarity=0.236  Sum_probs=50.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc--CCC-EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l--g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      ++.++||+|+ |.+|...++.+...|+ .++.+.+++++.+. .+.+  +.. ..+..+-.+ ++..+.++++.+ ..++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAA-RWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            4678999988 9999999998888898 57777777655432 2222  221 222222222 223333333322 2357


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+++++.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.053  Score=44.52  Aligned_cols=82  Identities=27%  Similarity=0.356  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-. ..+..+.+++..+.. +
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence            4689999988 9999999998888899 588888887654322    233322 22222221 222333333333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.052  Score=45.20  Aligned_cols=82  Identities=23%  Similarity=0.280  Sum_probs=50.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC------CCEEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIG------ADNIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg------~~~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+. .+.+.      .-.++..+-. .++....+++..+ .
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA-W   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence            3679999998 9999999999998999 58888777665432 22221      1122222221 2223333333322 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      ..++|++|++.|.
T Consensus        84 ~~~~d~li~~ag~   96 (276)
T PRK05875         84 HGRLHGVVHCAGG   96 (276)
T ss_pred             cCCCCEEEECCCc
Confidence            3478999999873

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.049  Score=44.91  Aligned_cols=82  Identities=27%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEecCC-CcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~~-~~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ +.+     +.. ..+..+- +.+++.+.++++.+. 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA-   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            4678999987 9999999998888999 577777777665433 222     211 1222222 222333444443332 


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+.+|++|++.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            2479999999884

>PLN02253 xanthoxin dehydrogenase

Probab=96.44  E-value=0.048  Score=45.54  Aligned_cols=82  Identities=22%  Similarity=0.283  Sum_probs=50.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+ ..+.++.   ...+..+-. .++..+.++.+.+. -++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            4678999987 9999999998888899 5777777665443 3333431   122222222 22333333333332 246


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.051  Score=44.84  Aligned_cols=81  Identities=26%  Similarity=0.341  Sum_probs=50.9

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC--CCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG--ADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +.++  ....+..+-.+ .++.+.+....+...+++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47999988 9999999998888899 578888887776544 3333  11222222222 22333333332221457999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus        81 vi~~ag~   87 (260)
T PRK08267         81 LFNNAGI   87 (260)
T ss_pred             EEECCCC
Confidence            9999985

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.036  Score=44.57  Aligned_cols=77  Identities=27%  Similarity=0.358  Sum_probs=50.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHH-HHhCCCccEEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-KAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~vid  186 (290)
                      ++++|+|+ |.+|...++.+...|+ .++.+++++++.+.++..+.. .+..+-.+.+   .++++. +..+.++|+++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAE-ALALDVADPA---SVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccce-EEEecCCCHH---HHHHHHHHhcCCCCCEEEE
Confidence            47899987 9999999987777899 578888887777666655533 2222222222   222221 113347999999


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            8875

>PRK01581 speE spermidine synthase; Validated

Probab=96.43  E-value=0.11  Score=44.85  Aligned_cols=100  Identities=16%  Similarity=0.154  Sum_probs=65.7

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-----------CEEEecCCCcccHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-----------DNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-----------~~~~~~~~~~~~~~~~~~~  172 (290)
                      .....++|||.|+|. |.++..+++..+.+.+++++-+++-.+.++.+..           ..+-.   .-.|-.+.++ 
T Consensus       147 ~h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~v---vi~Da~~fL~-  221 (374)
T PRK01581        147 KVIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNV---HVCDAKEFLS-  221 (374)
T ss_pred             hCCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEE---EECcHHHHHH-
Confidence            345567999998764 6677888887666789999999999998886310           11100   0122222232 


Q ss_pred             HHHHhCCCccEEEEccCC-----------HHHHHHHHHHhccCCEEEEec
Q 022879          173 IQKAMGTGIDVSFDCAGL-----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                         .....||+||--...           .+.+..+.+.|+++|.++.-.
T Consensus       222 ---~~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        222 ---SPSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             ---hcCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence               234579999765422           125667888999999988764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.43  E-value=0.053  Score=44.69  Aligned_cols=82  Identities=18%  Similarity=0.294  Sum_probs=50.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCCcc-cHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~~~-~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+    +..+... .+..+-.+. ++.+.+.+... ...
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            4679999988 9999999998888999 577777777554322    2334332 222222222 22223333222 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999999875

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.055  Score=43.87  Aligned_cols=82  Identities=27%  Similarity=0.282  Sum_probs=51.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC---CCEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIG---ADNIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      .+.+++|+|+ |.+|...++.+...|+ .|+++++++++... .+.+.   ....+..+- ...++.+.++++.+. ..+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999988 9999999998888899 58888887766543 34442   112222221 222333334443322 247


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.42  E-value=0.054  Score=45.22  Aligned_cols=81  Identities=20%  Similarity=0.249  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~  179 (290)
                      ++.+++|+|+ |++|.+.++.+...|+ .|+.+++++++.+. .++   .+.. ..+..+-.+. +....++++.+ .-+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE-DFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            4688999987 9999999999988999 57777777655432 222   2322 1222222222 23333333322 224


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|++|++.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.39  E-value=0.14  Score=41.52  Aligned_cols=99  Identities=23%  Similarity=0.272  Sum_probs=63.3

Q ss_pred             HHHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCC----hhH--------HHHHHHcCCCEEEecCCC
Q 022879           98 HACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAP--RIVIVDVD----DYR--------LSVAKEIGADNIVKVSTN  162 (290)
Q Consensus        98 ~~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~~~~~~~~  162 (290)
                      .+++... --.+.+++|.|+|+.|..++..+...|++  +++.++++    .++        .++++.++... .     
T Consensus        14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----   87 (226)
T cd05311          14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----   87 (226)
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----
Confidence            3444433 24568999999999999999999999998  89999887    333        33445543211 0     


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEccCCHHHH-HHHHHHhccCCEEEEec
Q 022879          163 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG  211 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g  211 (290)
                      ..++.+.+        .++|++|++++. ..+ ...++.+.+...+..+.
T Consensus        88 ~~~l~~~l--------~~~dvlIgaT~~-G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          88 GGTLKEAL--------KGADVFIGVSRP-GVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             cCCHHHHH--------hcCCEEEeCCCC-CCCCHHHHHhhCCCCEEEEeC
Confidence            01222222        248999999973 333 35667777776666554

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.39  E-value=0.057  Score=42.28  Aligned_cols=97  Identities=21%  Similarity=0.248  Sum_probs=62.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      ++++.+||-.|+|. |..++.+++......|++++.+++..+.+++    .+.+.+....   .+.    .++.  ....
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~---~d~----~~~~--~~~~  112 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVH---GRA----EEFG--QEEK  112 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEe---ccH----hhCC--CCCC
Confidence            55688999888755 6666666665543479999999887766643    4443221111   121    1111  1357


Q ss_pred             ccEEEEccCC--HHHHHHHHHHhccCCEEEEec
Q 022879          181 IDVSFDCAGL--NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       181 ~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ||+|+-....  +..+..+.+.|+++|+++.+-
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            9999874332  356778889999999999773

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.37  E-value=0.08  Score=45.22  Aligned_cols=94  Identities=19%  Similarity=0.224  Sum_probs=57.7

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|||+|+ |-+|...++.+...|. .|.++.++.++...+...+.+.+ ..+-.++   +.+.+..    .++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v-~~Dl~d~---~~l~~al----~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELV-YGDLSLP---ETLPPSF----KGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEE-ECCCCCH---HHHHHHH----CCCCEEEECC
Confidence            6899998 9999999998888898 57777777766555444554332 2121111   2233221    3689999987


Q ss_pred             CCHH------------HHHHHHHHhccCC--EEEEecc
Q 022879          189 GLNK------------TMSTALGATCAGG--KVCLVGM  212 (290)
Q Consensus       189 g~~~------------~~~~~~~~l~~~G--~~v~~g~  212 (290)
                      +...            ....+++.++..|  +++.++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss  110 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI  110 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence            6310            1123445554444  7887775

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.37  E-value=0.058  Score=44.42  Aligned_cols=81  Identities=14%  Similarity=0.212  Sum_probs=49.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCC--CEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGA--DNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~--~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      ++++||+|+ |.+|...++.+...|+ .++.++++.++.+.. +.    .+.  ...+..+-.+ ++....+.++.+. -
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            468999988 9999999998888899 578887776654322 22    221  1222222222 2233333333222 2


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|+++++.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.37  E-value=0.058  Score=45.02  Aligned_cols=83  Identities=24%  Similarity=0.250  Sum_probs=49.5

Q ss_pred             CCCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHHcCCCEEEecCCC-cccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLS-VAKEIGADNIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      -.++++||+|+   +++|.+.++.+...|+ .|+.+.+++   ++.+ +.++++....+..+-. .++..+.++++.+ .
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK-K   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH-h
Confidence            35688999986   5899999998888999 566665553   2222 2244553223333222 2233333333322 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|+++++.|.
T Consensus        86 ~g~iD~lv~nAG~   98 (272)
T PRK08159         86 WGKLDFVVHAIGF   98 (272)
T ss_pred             cCCCcEEEECCcc
Confidence            3479999999874

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.37  E-value=0.044  Score=44.92  Aligned_cols=82  Identities=18%  Similarity=0.249  Sum_probs=48.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .+.++||+|+ |.+|...+..+...|++ ++.+ .+++++.+ ....++.. ..+..+- ..+++.+.+++..+..+.++
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3578999987 99999999988888995 5444 44444433 33334422 1222222 12233334444333334459


Q ss_pred             cEEEEccC
Q 022879          182 DVSFDCAG  189 (290)
Q Consensus       182 d~vid~~g  189 (290)
                      |++|++.|
T Consensus        83 d~li~~ag   90 (253)
T PRK08642         83 TTVVNNAL   90 (253)
T ss_pred             eEEEECCC
Confidence            99999876

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.36  E-value=0.11  Score=44.49  Aligned_cols=99  Identities=14%  Similarity=0.118  Sum_probs=65.5

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHH-HHHCCCCeEEEEeCChhHHHH-HHHc----CCCEEEecCCCcccHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLA-ARAFGAPRIVIVDVDDYRLSV-AKEI----GADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~l-a~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +....+...+++|.|+|..|...+.. +...+++.+.+.++++++.+. .+.+    +.. +..+    .++.+.+    
T Consensus       120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~----  190 (325)
T PRK08618        120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAI----  190 (325)
T ss_pred             HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHH----
Confidence            33333567789999999999776654 456788889999999887653 3333    332 2222    2222222    


Q ss_pred             HHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                          ...|+|+.|+++...+- . ..++++-.+..+|...
T Consensus       191 ----~~aDiVi~aT~s~~p~i-~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        191 ----EEADIIVTVTNAKTPVF-S-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             ----hcCCEEEEccCCCCcch-H-HhcCCCcEEEecCCCC
Confidence                35899999999764333 3 8889888888888654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.36  E-value=0.064  Score=43.52  Aligned_cols=80  Identities=19%  Similarity=0.285  Sum_probs=49.7

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ++++||+|+ +++|...++.+...|+ .|+.+++++++ .+.++..+.. .+..+- ..++..+.+.++.+ .-+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQ-HTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHh-hCCCccEE
Confidence            468999987 9999999998888899 57777666543 3334445532 232222 22233333333322 22469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            999874

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.36  E-value=0.064  Score=43.81  Aligned_cols=81  Identities=17%  Similarity=0.260  Sum_probs=50.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC-CEEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~-~~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...++.+...|+ .|+.++++.++...+    +..+. ..++..+-.+ +++.+.++++.+ .-.
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ-ALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            4678999988 9999999998888899 577777776554432    22232 2223332222 223333333322 234


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            6899999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.35  E-value=0.063  Score=44.11  Aligned_cols=82  Identities=28%  Similarity=0.456  Sum_probs=50.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .++.+++++++.+.+ +++   +.. ..+..+-.+ +++.+.+..+.+ ...
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK-DIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH-hcC
Confidence            4678999987 9999999998888899 577787776654332 222   221 122222222 223333333322 235


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            69999999974

>PRK00536 speE spermidine synthase; Provisional

Probab=96.35  E-value=0.022  Score=47.00  Aligned_cols=102  Identities=10%  Similarity=-0.123  Sum_probs=67.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .....++|||.|+|. |.++-+++|.-.  .|+.++-+++-.++.++ ++.-.- .+++..-.+...+.   +...+.||
T Consensus        69 ~h~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~~---~~~~~~fD  141 (262)
T PRK00536         69 TKKELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLL---DLDIKKYD  141 (262)
T ss_pred             hCCCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehhh---hccCCcCC
Confidence            346679999998766 557788998853  79999999998888887 331100 11122222211221   22335799


Q ss_pred             EEE-EccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          183 VSF-DCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       183 ~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +|| |++-.++....+.+.|+++|.++.-..
T Consensus       142 VIIvDs~~~~~fy~~~~~~L~~~Gi~v~Qs~  172 (262)
T PRK00536        142 LIICLQEPDIHKIDGLKRMLKEDGVFISVAK  172 (262)
T ss_pred             EEEEcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence            985 546666677789999999999997643

>PRK04457 spermidine synthase; Provisional

Probab=96.35  E-value=0.091  Score=43.57  Aligned_cols=97  Identities=16%  Similarity=0.170  Sum_probs=65.1

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC----CEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+.|.|+ |..+..+++......+++++-+++-.+.+++. +.    ..+-..   ..|..+.+.+    ....
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~----~~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV----HRHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh----CCCC
Confidence            4567899999876 77888888877544799999999999888763 31    111111   1233333332    2457


Q ss_pred             ccEEE-EccCC---------HHHHHHHHHHhccCCEEEEe
Q 022879          181 IDVSF-DCAGL---------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       181 ~d~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +|+|+ |....         .+.+..+.+.|+++|.++.-
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            99996 33211         35678899999999999873

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.073  Score=43.86  Aligned_cols=81  Identities=20%  Similarity=0.171  Sum_probs=50.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC---CEEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  181 (290)
                      +.++||+|+ |++|...++.+...|+ .++.+++++++.+.. +.+..   ...+..+-. .+++.+.++++.+.. +.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH-GLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            468999987 9999999998888899 578888877765543 33321   112222222 223333333333222 358


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999999874

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.32  E-value=0.041  Score=47.11  Aligned_cols=41  Identities=20%  Similarity=0.188  Sum_probs=33.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      .|++++|+|+ +++|.+.++.+...|+ .|+.+++++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~   93 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDV   93 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHH
Confidence            4789999998 9999998888878899 478888888776543

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.32  E-value=0.15  Score=38.69  Aligned_cols=88  Identities=13%  Similarity=0.106  Sum_probs=53.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|+|.|+|.+|..-++.+...|+ .|.+++  ++..+.++.++......     ..+.       +..-.++|+||-
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~~-----~~~~-------~~dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWKQ-----KTFS-------NDDIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEEe-----cccC-------hhcCCCceEEEE
Confidence            57899999999999988888888899 466663  33333334454222211     1111       112356899999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +++.+ .++..+...+..+.++..
T Consensus        77 aT~d~-e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         77 ATNQH-AVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CCCCH-HHHHHHHHHHHHCCcEEE
Confidence            99975 455555544433334443

>PRK09242 tropinone reductase; Provisional

Probab=96.32  E-value=0.076  Score=43.69  Aligned_cols=82  Identities=23%  Similarity=0.285  Sum_probs=51.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|...++.+...|+ .++.+++++++.+.+ +++     +.. ..+..+-. .+++.+.+.++.+. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH-   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence            4789999988 9999999999999999 577777777665433 222     111 11222211 22333333333322 


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|+++++.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            3479999999985

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.31  E-value=0.071  Score=43.77  Aligned_cols=82  Identities=27%  Similarity=0.376  Sum_probs=50.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |.+|...++.+...|. .++.+++++++.+.. .++   +.. ..+..+-. .+++.+.+..+.+ ...
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE-TFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            3578999987 9999999998888899 577787877664432 222   322 12222222 2233333333322 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|.++|.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.056  Score=44.37  Aligned_cols=78  Identities=23%  Similarity=0.198  Sum_probs=48.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++||+|+ |++|...++.+...|+ .++.+++++++    +..+. ...+..+-. .+++.+.+..+.+ ....+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVE-RHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4689999987 9999999998888999 57777777654    11221 112222211 2233333333332 2346899


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        79 vi~~ag~   85 (252)
T PRK07856         79 LVNNAGG   85 (252)
T ss_pred             EEECCCC
Confidence            9999874

>PRK06398 aldose dehydrogenase; Validated

Probab=96.30  E-value=0.036  Score=45.81  Aligned_cols=76  Identities=16%  Similarity=0.292  Sum_probs=48.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ +++|.+.+..+...|+ .|+.+++++.+..      ....+..+- +.++..+.+++..+ .-+.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~-~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVIS-KYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            4679999988 9999999999999999 5777777654322      111222222 22233344444332 23469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.30  E-value=0.035  Score=50.46  Aligned_cols=73  Identities=26%  Similarity=0.421  Sum_probs=52.8

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +.++++|+|+|.|..|++++++++..|+ .|++.+..+.+.+.++++|.... .. .   ...+.+        ..+|+|
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~-~---~~~~~l--------~~~D~V   74 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-ST-S---DAVQQI--------ADYALV   74 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cC-c---chHhHh--------hcCCEE
Confidence            4578899999999999999999999999 58888877666666667776432 11 1   111111        247999


Q ss_pred             EEccCCH
Q 022879          185 FDCAGLN  191 (290)
Q Consensus       185 id~~g~~  191 (290)
                      +.+.|.+
T Consensus        75 V~SpGi~   81 (488)
T PRK03369         75 VTSPGFR   81 (488)
T ss_pred             EECCCCC
Confidence            9998875

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.061  Score=45.63  Aligned_cols=82  Identities=22%  Similarity=0.279  Sum_probs=49.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----C-CC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----G-AD-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g-~~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|..+++.+...|+ .++.+.++.++.+. .+.+    + .. ..+..+-. .++..+.++++.+ .
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA-A   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh-h
Confidence            5689999988 9999999998888899 57777777665432 2222    1 11 12222222 2223333333322 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -.++|++|+++|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence            3469999999874

>PRK04148 hypothetical protein; Provisional

Probab=96.28  E-value=0.28  Score=35.93  Aligned_cols=95  Identities=12%  Similarity=0.180  Sum_probs=64.5

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ..++.++++.|.| .|...+..+..+|. .|++++.+++..+.++..+...+.+ +--++++     ++    =.++|+|
T Consensus        14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~-----~~----y~~a~li   81 (134)
T PRK04148         14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL-----EI----YKNAKLI   81 (134)
T ss_pred             cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH-----HH----HhcCCEE
Confidence            3456889999998 78755556667898 7999999999999888887655443 1111221     11    1368999


Q ss_pred             EEccCCHHHHHHHHHHhccC-CEEEEec
Q 022879          185 FDCAGLNKTMSTALGATCAG-GKVCLVG  211 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~-G~~v~~g  211 (290)
                      ...-..++....+++..+.- ..++..-
T Consensus        82 ysirpp~el~~~~~~la~~~~~~~~i~~  109 (134)
T PRK04148         82 YSIRPPRDLQPFILELAKKINVPLIIKP  109 (134)
T ss_pred             EEeCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence            99888877777777766554 4444443

>PRK09186 flagellin modification protein A; Provisional

Probab=96.28  E-value=0.077  Score=43.55  Aligned_cols=81  Identities=23%  Similarity=0.340  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCE--EEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN--IVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~--~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |.+|...+..+...|+ .++.+.+++++.+.+ +.+    +...  ++..+-. .+++.+.+++..+ .
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~-~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE-K   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH-H
Confidence            4689999988 9999999999988999 577777777665432 332    2211  1122222 2233344444332 2


Q ss_pred             CCCccEEEEccC
Q 022879          178 GTGIDVSFDCAG  189 (290)
Q Consensus       178 ~~~~d~vid~~g  189 (290)
                      -.++|+++++.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence            246999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.073  Score=44.48  Aligned_cols=82  Identities=28%  Similarity=0.404  Sum_probs=50.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+. .+++   +.. ..+..+- ..+++.+.+.+..+ .-+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR-LLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-HcC
Confidence            4678999987 9999999998888999 57777777655442 2222   322 1222221 12233333333322 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.27  E-value=0.068  Score=44.33  Aligned_cols=81  Identities=17%  Similarity=0.207  Sum_probs=47.7

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +  ++|.+.++.+...|+ .++.++++++..+.+++    .+....+..+-. .++..+.+++..+ .-
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK-VW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh-hc
Confidence            4678999987 3  799998888888899 46666665322222322    232222322222 2233333443332 22


Q ss_pred             CCccEEEEccC
Q 022879          179 TGIDVSFDCAG  189 (290)
Q Consensus       179 ~~~d~vid~~g  189 (290)
                      +.+|++|++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            46999999997

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.25  E-value=0.077  Score=44.06  Aligned_cols=81  Identities=23%  Similarity=0.443  Sum_probs=52.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh----HHHHHHHcCCC--EEEecCCCcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY----RLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      .|+.|||+|+ +++|.+.++-...+|+ +++..+.+++    ..+..+..|.-  ...|. +..++.....++..+..| 
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~G-  113 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEVG-  113 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhcC-
Confidence            6899999987 8999888777777788 5767766653    33333444412  22232 234455554455544444 


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|++++++|.
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            79999999886

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.24  E-value=0.078  Score=43.59  Aligned_cols=82  Identities=17%  Similarity=0.234  Sum_probs=49.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.++..+.  ..+.++.++.. ..+..+- ..++..+.++++.+. ..++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence            4679999987 9999999999888999 5666654432  22333344422 1222222 222334444444332 3479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999975

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.091  Score=43.38  Aligned_cols=81  Identities=23%  Similarity=0.347  Sum_probs=49.4

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      +.++||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +   ..+... ++..+-. .+++...+++..+ .-.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVA-RFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcCC
Confidence            357999988 9999999998888898 688888886654422 2   233221 2222221 2223333333322 2246


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.23  E-value=0.077  Score=37.10  Aligned_cols=88  Identities=17%  Similarity=0.263  Sum_probs=57.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+|||.|+|.+|..-++.+...|+ .+.+++...   +..+  +.-....     ..+.+        .-.++++||-
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA   66 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence            57899999999999999999999999 677776664   2222  2111221     12211        1256999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +++.+..-.......+..|.++.....
T Consensus        67 at~d~~~n~~i~~~a~~~~i~vn~~D~   93 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGILVNVVDD   93 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSEEEETT-
T ss_pred             cCCCHHHHHHHHHHHhhCCEEEEECCC
Confidence            999866655666677778988887643

>PRK12743 oxidoreductase; Provisional

Probab=96.23  E-value=0.072  Score=43.87  Aligned_cols=81  Identities=21%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH----HHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++++||+|+ +++|..+++.+...|++ |+.+ .++.++.+.    ++..+.. ..+..+-. .++..+.+.++.+ .-.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQ-RLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            468999988 99999999999999995 5544 444443322    2334432 22222222 2233333333332 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.076  Score=43.73  Aligned_cols=83  Identities=20%  Similarity=0.313  Sum_probs=50.1

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhH-HH-HHH---HcCC--CEEEecCCCc-ccHHHHHHHHH
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYR-LS-VAK---EIGA--DNIVKVSTNL-QDIAEEVEKIQ  174 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~-~~-~~~---~lg~--~~~~~~~~~~-~~~~~~~~~~~  174 (290)
                      +..+.++||+|+ |++|...++.+... |+ .|+.+++++++ .+ ..+   ..+.  -.++..+-.+ ++..+.+++..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            566789999988 99999999876666 47 57777776654 22 223   3332  1233333222 23333344443


Q ss_pred             HHhCCCccEEEEccCC
Q 022879          175 KAMGTGIDVSFDCAGL  190 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~  190 (290)
                      +  .+++|+++++.|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            2  2579999988765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.22  E-value=0.085  Score=43.42  Aligned_cols=82  Identities=32%  Similarity=0.358  Sum_probs=51.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +.++.. ..+..+-. .++..+.++++.+. -.++|
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            3578999988 9999999999988999 578888887765543 334422 12222222 22333333333222 24699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        83 ~li~~ag~   90 (257)
T PRK07067         83 ILFNNAAL   90 (257)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.085  Score=43.95  Aligned_cols=80  Identities=20%  Similarity=0.160  Sum_probs=50.6

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++||+|+ |.+|...++.+...|. .++++.+++++.+.++. .+.. ..+..+-. .+++.+.++++.+ ...++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA-ALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            57999987 9999999988888899 57888888877665543 2321 12222211 2223333333322 23568999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.087  Score=43.32  Aligned_cols=82  Identities=16%  Similarity=0.253  Sum_probs=49.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-H-HHHHH---HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-R-LSVAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      ++.++||+|+ +++|.+.++.+...|+ .++.++++++ . .+..+   ..+.. ..+..+-. .++..+.+++..+ .-
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA-EL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999987 9999999999988999 5666666542 2 22222   23322 22222222 2233333333332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +.+|++|++.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            569999999984

>PRK07985 oxidoreductase; Provisional

Probab=96.21  E-value=0.19  Score=42.43  Aligned_cols=82  Identities=20%  Similarity=0.205  Sum_probs=47.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ +++|.+.++.+...|++ |+.+.++  .++.+.+    +..+... .+..+-. .++..+.+++..+ .
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK-A  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH-H
Confidence            5678999988 99999999988889994 6665433  2222222    2333221 2222222 2233333333332 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|+++++.|.
T Consensus       126 ~g~id~lv~~Ag~  138 (294)
T PRK07985        126 LGGLDIMALVAGK  138 (294)
T ss_pred             hCCCCEEEECCCC
Confidence            3479999998873

>PLN02366 spermidine synthase

Probab=96.21  E-value=0.057  Score=45.83  Aligned_cols=101  Identities=25%  Similarity=0.281  Sum_probs=64.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC------CEEEecCCCcccHHHHHHHHHHHh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA------DNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~------~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ....++||+.|+|. |..+..+++.-+...+.+++-+++-.+.++++ ..      +.-+.+  ...|-.+.+++   ..
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~v--i~~Da~~~l~~---~~  162 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNL--HIGDGVEFLKN---AP  162 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEE--EEChHHHHHhh---cc
Confidence            46678999998866 66777888887766899999998877777663 21      100110  01222222222   12


Q ss_pred             CCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ++.||+||--...          .+.+..+.+.|+++|.++.-.
T Consensus       163 ~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        163 EGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             CCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            4579999764322          135677889999999997654

>PRK06720 hypothetical protein; Provisional

Probab=96.21  E-value=0.14  Score=39.48  Aligned_cols=82  Identities=23%  Similarity=0.315  Sum_probs=49.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++.+++|+|+ +++|...+..+...|+ .++.++.++++.+.. +   ..+.. ..+..+-. .+++.+.+.+..+. -+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            5778999987 8999999988888898 578887776554322 2   23422 22332221 12333333333222 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            68999999884

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.097  Score=42.76  Aligned_cols=81  Identities=22%  Similarity=0.274  Sum_probs=49.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc-----CC-CEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI-----GA-DNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l-----g~-~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      ++++||+|+ |++|...++.+...|. .++.+++++++.+.+. .+     +. -..+..+-.+ +++.+.++++.. .-
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD-EL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            468999987 9999988888888898 5777778776654332 11     11 1222222222 233333343332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|++|++.|.
T Consensus        80 ~~id~vi~~ag~   91 (248)
T PRK08251         80 GGLDRVIVNAGI   91 (248)
T ss_pred             CCCCEEEECCCc
Confidence            569999999873

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.19  E-value=0.045  Score=45.97  Aligned_cols=43  Identities=30%  Similarity=0.414  Sum_probs=37.1

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      ..+.+++|.|+|++|.+++..+...|++.+..++++.+|.+.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            3567999999999999999999999998899999998876644

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=96.19  E-value=0.089  Score=43.83  Aligned_cols=84  Identities=24%  Similarity=0.276  Sum_probs=52.6

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H---cCCC----EEEecCCCcc-cHHHHHHHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E---IGAD----NIVKVSTNLQ-DIAEEVEKIQK  175 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---lg~~----~~~~~~~~~~-~~~~~~~~~~~  175 (290)
                      -.+..+||+|+ .++|.+.+..+...|+ +|+.+++++++.+... .   .+..    ..+..+-..+ +..+.+....+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            36788999987 9999999999999999 6777878877754332 2   2221    1222222222 23333333222


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      ...+++|+++++.|.
T Consensus        85 ~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGA   99 (270)
T ss_pred             HhCCCCCEEEEcCCc
Confidence            225679999998876

>PLN02823 spermine synthase

Probab=96.17  E-value=0.082  Score=45.41  Aligned_cols=99  Identities=16%  Similarity=0.177  Sum_probs=62.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-C-EEEecCC----CcccHHHHHHHHHHHhCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-D-NIVKVST----NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~-~~~~~~~----~~~~~~~~~~~~~~~~~~  179 (290)
                      ...++|||.|+|. |..+.++++..+.+.+++++-+++-.++++++-. . ..+. +.    ...|-...+    +...+
T Consensus       102 ~~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~-dprv~v~~~Da~~~L----~~~~~  175 (336)
T PLN02823        102 PNPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFC-DKRLELIINDARAEL----EKRDE  175 (336)
T ss_pred             CCCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhccccccccc-CCceEEEEChhHHHH----hhCCC
Confidence            3567999998765 5667778887777789999999999998877421 1 0000 00    012222222    23456


Q ss_pred             CccEEEEccCC------------HHHHH-HHHHHhccCCEEEEe
Q 022879          180 GIDVSFDCAGL------------NKTMS-TALGATCAGGKVCLV  210 (290)
Q Consensus       180 ~~d~vid~~g~------------~~~~~-~~~~~l~~~G~~v~~  210 (290)
                      .+|+||--...            .+.+. .+.+.|+++|.++.-
T Consensus       176 ~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q  219 (336)
T PLN02823        176 KFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ  219 (336)
T ss_pred             CccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence            79999653211            12344 677889999998754

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.16  E-value=0.16  Score=44.28  Aligned_cols=83  Identities=19%  Similarity=0.108  Sum_probs=48.2

Q ss_pred             CCCCeEEEECC-CHHHHH--HHHHHHHCCCCeEEEEeCCh---h-------------HHHHHHHcCCC-EEEecCCC-cc
Q 022879          106 GPETNVLIMGA-GPIGLV--TMLAARAFGAPRIVIVDVDD---Y-------------RLSVAKEIGAD-NIVKVSTN-LQ  164 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~-~~~~~~~~-~~  164 (290)
                      ..++++||+|+ +++|.+  .++.+ ..|++ +++++...   +             -.+.++.+|.. ..+..+-. .+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            45678999987 899998  45555 78994 56665321   1             12344556643 23333322 23


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEccCCH
Q 022879          165 DIAEEVEKIQKAMGTGIDVSFDCAGLN  191 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~d~vid~~g~~  191 (290)
                      +..+.++++.+. -+++|+++++++.+
T Consensus       117 ~v~~lie~I~e~-~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQD-LGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHh-cCCCCEEEECCccC
Confidence            333344444332 35699999998875

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.095  Score=43.66  Aligned_cols=81  Identities=23%  Similarity=0.207  Sum_probs=51.0

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +.++||+|+ |.+|...++.+...|. .|+.+++++++.+.+.. ++.. ..+..+- ..+++.+.+..+.+ .-.++|.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            468999987 9999999998888898 57888888776554433 3321 2222222 12233333333332 2247899


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999885

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.15  E-value=0.15  Score=43.87  Aligned_cols=90  Identities=22%  Similarity=0.244  Sum_probs=62.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|++|.|.|.|.+|...++.++.+|+ .|++.+++.+.. ....++..    +    .++.+.+        ...|+|+-
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~----~~l~ell--------~~aDiV~l  210 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----Y----RPLEELL--------RESDFVSL  210 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----e----cCHHHHH--------hhCCEEEE
Confidence            57899999999999999999999999 588887765433 23334431    1    1222222        23689988


Q ss_pred             ccCCHHH----H-HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKT----M-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++.....    + ...++.++++..++.++...
T Consensus       211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~  243 (333)
T PRK13243        211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK  243 (333)
T ss_pred             eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence            8875332    1 35678889999999887654

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.062  Score=44.59  Aligned_cols=79  Identities=20%  Similarity=0.264  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+.+++|+|+ |.+|...++.+...|+ .|+++++++++.+..  -+. ..+..+- +.+++.+.++...+ ..+.+|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~-~~~~~D~~d~~~~~~~~~~~~~-~~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGV-ELLELDVTDDASVQAAVDEVIA-RAGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCC-eeEEeecCCHHHHHHHHHHHHH-hCCCCCEE
Confidence            3568999988 9999999998888899 588887776554321  122 2222222 22334444444433 23469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            999985

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.13  E-value=0.1  Score=42.93  Aligned_cols=82  Identities=17%  Similarity=0.235  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ +++|...+..+...|+ .++.+++++++.+.+    +..+.. ..+..+-.+ ++..+.++.+.+ .-.
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS-KLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4689999987 9999999998888899 467777776654432    222322 222222222 223333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.087  Score=43.95  Aligned_cols=80  Identities=16%  Similarity=0.190  Sum_probs=49.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCC---CEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA---DNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~---~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +.++||+|+ |.+|...+..+...|+ .|+++++++++.+.+..    .+.   ...+..+-. .+++.+ +++..+ .-
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~-~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK-EI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH-hc
Confidence            568999988 9999999998888899 57777777765543322    221   122222222 223333 444332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            478999999874

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.12  E-value=0.023  Score=46.48  Aligned_cols=108  Identities=28%  Similarity=0.426  Sum_probs=65.3

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +...+++||++|+=.|.|+ |.+...|+++.|.. .|+..+.++++.+.++    ..|....+....  .|..+.-  +.
T Consensus        33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~~  107 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--FD  107 (247)
T ss_dssp             HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----S
T ss_pred             HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--cc
Confidence            3457899999999988766 77888888877643 7999999998887664    355432221111  1111000  00


Q ss_pred             HHhCCCccEEE-EccCCHHHHHHHHHHh-ccCCEEEEecc
Q 022879          175 KAMGTGIDVSF-DCAGLNKTMSTALGAT-CAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~G~~v~~g~  212 (290)
                      +.....+|.|| |--..-..+..+.+.| +++|+++.+.+
T Consensus       108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            00124688775 4444345788999999 89999999865

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.12  E-value=0.11  Score=42.28  Aligned_cols=82  Identities=22%  Similarity=0.283  Sum_probs=50.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++.++||+|+ |.+|...++.+...|. .++...++.++.+.+ ..++.. ..+..+-. .+++.+.++++.+ .-.++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEA-DLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            4679999987 9999999998888898 577666666655433 334422 22222222 2223333333322 234799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      .+|++.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999884

>TIGR00417 speE spermidine synthase

Probab=96.11  E-value=0.067  Score=44.59  Aligned_cols=100  Identities=17%  Similarity=0.179  Sum_probs=61.7

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC------CEEEecCCCcccHHHHHHHHHHHh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA------DNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~------~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .+.+++||+.|+|. |..+..+++......+.+++.+++-.+.+++. ..      +.-+..  ...+..+.+++    .
T Consensus        70 ~~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i--~~~D~~~~l~~----~  142 (270)
T TIGR00417        70 HPNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDL--QIDDGFKFLAD----T  142 (270)
T ss_pred             CCCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEE--EECchHHHHHh----C
Confidence            34556999998865 55666777766566899999998877777652 11      000110  01222222322    2


Q ss_pred             CCCccEEEEccC----------CHHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...+|+||-...          ..+.++.+.+.|+++|.++...
T Consensus       143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            467999975332          1234567889999999998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.068  Score=44.05  Aligned_cols=76  Identities=18%  Similarity=0.199  Sum_probs=47.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcc-cHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~  183 (290)
                      +++++||+|+ |++|...++.+...|+ .|+.+++++...     ++. ...+..+-.+. +..+.+.++.+ ..+++|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLE-RLGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4689999987 9999999998888899 577777765432     121 11222222222 23333333322 2356999


Q ss_pred             EEEccC
Q 022879          184 SFDCAG  189 (290)
Q Consensus       184 vid~~g  189 (290)
                      +|++.|
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            999987

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.09  E-value=0.084  Score=43.15  Aligned_cols=83  Identities=20%  Similarity=0.173  Sum_probs=48.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-A---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...+..+...|++.++...++.++.+. .   +..+.. ..+..+-. .++....+++..+. -.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4578999988 9999999999998999533334555544322 2   223322 22222222 22333333333322 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.09  E-value=0.4  Score=39.14  Aligned_cols=105  Identities=16%  Similarity=0.146  Sum_probs=59.4

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH-H---HHHHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL-S---VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~---~~~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +.++||+|+ |.+|...++.+...|++.++...++.++. +   .++..+.. ..+..+- ...++...++++.+. -.+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence            578999987 99999999988889995333333332222 2   22333322 2222222 122333333444332 247


Q ss_pred             ccEEEEccCC----------HH---------------HHHHHHHHhccCCEEEEeccC
Q 022879          181 IDVSFDCAGL----------NK---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       181 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|.+|++.|.          .+               ..+.+.+.++..|+++.++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~  142 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV  142 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence            9999999983          11               122345555667899988753

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.08  E-value=0.026  Score=47.12  Aligned_cols=46  Identities=30%  Similarity=0.377  Sum_probs=39.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG  152 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg  152 (290)
                      ++++++|.|+|+.+.+++.-+...|+.+++++.++.+|.+.+ +.++
T Consensus       125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~  171 (283)
T COG0169         125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG  171 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            579999999999999999999999988899998988886654 4444

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.3  Score=40.01  Aligned_cols=107  Identities=17%  Similarity=0.208  Sum_probs=59.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHH-HHHHHc---CCC-EEEecCCCc-ccHHHHHHHHHHH--
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRL-SVAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKA--  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~--  176 (290)
                      .++++||+|+ +++|.+.++.+...|++ ++.+ .+++++. +...++   +.. ..+..+-.+ ++....++++.+.  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4678999987 99999999999889995 5554 3443332 222222   321 112111111 1222223332211  


Q ss_pred             --hC-CCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEeccCC
Q 022879          177 --MG-TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       177 --~~-~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                        .+ .++|+++++.|..          +               ..+.++..++..|+++.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~  147 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA  147 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence              11 3799999998741          0               1122455566678999887543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.07  E-value=0.1  Score=43.07  Aligned_cols=81  Identities=16%  Similarity=0.127  Sum_probs=47.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH-HHH----cCCC-EEEecCCCc-ccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV-AKE----IGAD-NIVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~-~~~----lg~~-~~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      +++++||+|+ +++|.+.++.+...|++ |+.+. +++++.+. .+.    .+.. ..+..+-.+ ++..+.+.++.+. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED-   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence            4689999988 99999999988889995 55553 44444332 222    2321 233322222 2333333333222 


Q ss_pred             CCCccEEEEccC
Q 022879          178 GTGIDVSFDCAG  189 (290)
Q Consensus       178 ~~~~d~vid~~g  189 (290)
                      -..+|+++++.|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence            246999999885

>PRK08264 short chain dehydrogenase; Validated

Probab=96.06  E-value=0.047  Score=44.31  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=48.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+.++||+|+ |.+|...++.+...|.+.|+.++++.++.+.   .+.. ..+..+-.+.   +.++++.+. -..+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~---~~~~~~~~~-~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP---ASVAAAAEA-ASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH---HHHHHHHHh-cCCCCEE
Confidence            4678999987 9999999998888998557777777665442   3221 2222222111   123333221 2358999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            999886

>PLN02928 oxidoreductase family protein

Probab=96.05  E-value=0.18  Score=43.63  Aligned_cols=98  Identities=19%  Similarity=0.273  Sum_probs=61.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--C---CEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--A---DNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .|+++.|.|.|.+|..+++.++.+|+ .|++.+++..+... ..++  .   ...........+    +.++.    ...
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----L~ell----~~a  227 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHED----IYEFA----GEA  227 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccC----HHHHH----hhC
Confidence            57899999999999999999999999 68888776332111 1110  0   000000001122    33322    247


Q ss_pred             cEEEEccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879          182 DVSFDCAGLNKT-----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       182 d~vid~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      |+|+.++.....     -...++.|+++..+|.++...
T Consensus       228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~  265 (347)
T PLN02928        228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGG  265 (347)
T ss_pred             CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence            999988765322     135778899999999998543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.03  E-value=0.074  Score=40.10  Aligned_cols=96  Identities=23%  Similarity=0.259  Sum_probs=58.6

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ..+.+++|.|+|.+|...++.+...|...+.+.++++++.+ +.+.++... +..  ...+..+.        -.+.|+|
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~--~~~~~~~~--------~~~~Dvv   85 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAI--AYLDLEEL--------LAEADLI   85 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cce--eecchhhc--------cccCCEE
Confidence            45688999999999999998888886446888888877655 445555421 000  00111111        2468999


Q ss_pred             EEccCCHHH----HHHHHHHhccCCEEEEecc
Q 022879          185 FDCAGLNKT----MSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       185 id~~g~~~~----~~~~~~~l~~~G~~v~~g~  212 (290)
                      +.|++....    .......++++..++.++.
T Consensus        86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            999986421    1111233555666666654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=96.02  E-value=0.31  Score=41.22  Aligned_cols=61  Identities=20%  Similarity=0.263  Sum_probs=48.2

Q ss_pred             HHHHHH----hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE---eCChhHHHHHHHcCCCEEE
Q 022879           96 GVHACR----RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        96 a~~~l~----~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v---~~~~~~~~~~~~lg~~~~~  157 (290)
                      ||.++.    ...+.||.+.||-.. |+.|...+-.+...|++ ++.+   ..+.||...++.||+.-+.
T Consensus        87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk-~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYK-CIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCce-EEEEechhhhHHHHHHHHHcCCEEEe
Confidence            666653    367999999999976 99999999999999995 5555   3446788899999987554

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.02  E-value=0.14  Score=41.97  Aligned_cols=82  Identities=16%  Similarity=0.279  Sum_probs=51.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      ++.+++|+|+ |.+|...++.+...|+ .++.+++++++.+.+    +..+.. ..+..+- ..+++.+.+++.... -+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE-HG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence            5789999988 9999999998888899 588888876654332    223321 2222222 222333333333322 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|.+|.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999999884

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.00  E-value=0.15  Score=43.99  Aligned_cols=35  Identities=37%  Similarity=0.552  Sum_probs=31.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|..+++.+...|...+..++.+
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34789999999999999999999999888888775

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.99  E-value=0.13  Score=42.59  Aligned_cols=82  Identities=26%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ +++|...+..+...|++ ++.+.+++++.+.+    +..+.. ..+..+-.+ ++..+.+.++.+ .-+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK-EVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence            5678999987 99999999888888995 77777777654422    223322 222222222 222333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            69999999875

>PRK04266 fibrillarin; Provisional

Probab=95.98  E-value=0.39  Score=38.89  Aligned_cols=102  Identities=15%  Similarity=0.111  Sum_probs=61.4

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      +...++++++||=.|+|+ |..+..+++..+...|++++.+++..+.+.+    ...-..+.-+..  +. .....+   
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~--~~-~~~~~l---  138 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR--KP-ERYAHV---  138 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC--Cc-chhhhc---
Confidence            346789999999888754 4456667776653379999999977664422    211122211111  10 000011   


Q ss_pred             hCCCccEEEEccCCHH----HHHHHHHHhccCCEEEEe
Q 022879          177 MGTGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  210 (290)
                       ...+|+++.....+.    .+..+.+.|+|+|+++..
T Consensus       139 -~~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        139 -VEKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             -cccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence             134999996554322    357788899999999874

>PRK08317 hypothetical protein; Provisional

Probab=95.97  E-value=0.19  Score=40.66  Aligned_cols=100  Identities=23%  Similarity=0.327  Sum_probs=66.7

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +...+.++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.++..    +.. .+...+.  .++        
T Consensus        13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~~--------   81 (241)
T PRK08317         13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DGL--------   81 (241)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--ccC--------
Confidence            446788999999999876 888888888874 23799999999888877654    111 1111110  100        


Q ss_pred             HHhCCCccEEEEcc------CCHHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ......+|+|+...      .....+..+.+.|+++|.++...
T Consensus        82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            00234689887532      22346788999999999998765

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.95  E-value=0.35  Score=38.36  Aligned_cols=90  Identities=12%  Similarity=0.166  Sum_probs=52.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh-H-HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-R-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+.+|||.|+|.+|...++.+...|+ .+++++.... . .++++. +.-...   ..  .+..       ..-.++|+|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~~---~~--~~~~-------~~l~~adlV   74 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRWK---QK--EFEP-------SDIVDAFLV   74 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEEE---ec--CCCh-------hhcCCceEE
Confidence            56899999999999999988888898 5666654321 1 122222 211111   11  1110       112468999


Q ss_pred             EEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          185 FDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |-+++.++ ++..+...+..+.++...
T Consensus        75 iaaT~d~e-lN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         75 IAATNDPR-VNEQVKEDLPENALFNVI  100 (202)
T ss_pred             EEcCCCHH-HHHHHHHHHHhCCcEEEC
Confidence            99999854 454444444455666554

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.14  Score=42.76  Aligned_cols=82  Identities=17%  Similarity=0.169  Sum_probs=48.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      +..++||+|+ |.+|...++.+...|+ .|+++.++.++.+..    +..+... .+..+-. .++..+.+++... .-+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   86 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE-ALG   86 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-hcC
Confidence            3468999987 9999999998888899 577776766544322    2233321 2222221 2223333333222 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        87 ~id~vi~~Ag~   97 (274)
T PRK07775         87 EIEVLVSGAGD   97 (274)
T ss_pred             CCCEEEECCCc
Confidence            68999999875

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.13  Score=42.39  Aligned_cols=82  Identities=20%  Similarity=0.227  Sum_probs=47.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHH---cCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .+.++||+|+ |.+|...++.+...|++ ++.+ .++.++.+ ..+.   .+.. ..+..+-. .+++.+.+.+..+. .
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFD-VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-L   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999988 99999999988888995 5444 33443332 2222   2322 12222221 22333333333222 2


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|++|++.|.
T Consensus        86 ~~iD~vi~~ag~   97 (258)
T PRK09134         86 GPITLLVNNASL   97 (258)
T ss_pred             CCCCEEEECCcC
Confidence            479999999874

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.026  Score=46.43  Aligned_cols=76  Identities=18%  Similarity=0.230  Sum_probs=47.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +.++||+|+ |.+|..+++.+...|+ .++++.+++++.+.+..    .+.. .++..+-  .+. +.+.+.   ...++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence            458999988 9999999999999999 57777777665544322    2221 1221111  121 123222   23479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        75 d~vi~~ag~   83 (257)
T PRK09291         75 DVLLNNAGI   83 (257)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.90  E-value=0.2  Score=40.14  Aligned_cols=35  Identities=31%  Similarity=0.414  Sum_probs=30.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|...++.+...|...+..++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45689999999999999999999999888888776

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.15  Score=43.36  Aligned_cols=81  Identities=19%  Similarity=0.243  Sum_probs=48.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh----------hHHH----HHHHcCCC-EEEecCC-CcccHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----------YRLS----VAKEIGAD-NIVKVST-NLQDIAEE  169 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~----------~~~~----~~~~lg~~-~~~~~~~-~~~~~~~~  169 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++.          ++.+    .++..+.. ..+..+- ..++....
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4689999988 9999999999988999 577776652          2222    22333422 2222222 22334434


Q ss_pred             HHHHHHHhCCCccEEEEcc-C
Q 022879          170 VEKIQKAMGTGIDVSFDCA-G  189 (290)
Q Consensus       170 ~~~~~~~~~~~~d~vid~~-g  189 (290)
                      +.+..+.. +++|++|++. |
T Consensus        86 ~~~~~~~~-g~iDilVnnA~g  105 (305)
T PRK08303         86 VERIDREQ-GRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHHc-CCccEEEECCcc
Confidence            44443322 4699999988 5

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.90  E-value=0.14  Score=41.68  Aligned_cols=82  Identities=20%  Similarity=0.226  Sum_probs=49.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |.+|...+..+...|+ .|++++++.++....    +..+.. .++..+-. .+++.+.++++.. ...
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVE-DFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence            4678999987 9999999998888899 578887875543322    222221 12222211 2223333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|.+|++.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            69999999865

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.1  Score=42.11  Aligned_cols=75  Identities=20%  Similarity=0.295  Sum_probs=47.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +++|+|+ +++|...++.+...|+ .++.+++++++.+.+ +.++.. .+..+-.+++   .++++.+.-...+|+++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVD-AIVCDNTDPA---SLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCc-EEecCCCCHH---HHHHHHHHHhhcCcEEEEC
Confidence            5899987 9999999998888899 577778887766543 444433 2222222222   2222222112368999998


Q ss_pred             cC
Q 022879          188 AG  189 (290)
Q Consensus       188 ~g  189 (290)
                      .|
T Consensus        77 ag   78 (223)
T PRK05884         77 PA   78 (223)
T ss_pred             CC
Confidence            65

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.90  E-value=0.13  Score=42.05  Aligned_cols=81  Identities=26%  Similarity=0.374  Sum_probs=50.2

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +.++||+|+ |.+|...+..+...|. .++.+++++++.+.+..    .+.. ..+..+- ..+++.+.++++.+ ...+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAA-EFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hcCC
Confidence            357999988 9999999998888899 58888887766544322    2221 1222221 22234343444432 2346


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      .|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999998864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06484 short chain dehydrogenase; Validated

Probab=95.90  E-value=0.091  Score=48.19  Aligned_cols=82  Identities=27%  Similarity=0.381  Sum_probs=53.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +++++||+|+ +++|.+.++.+...|+ .|+.++++.++.+ ..++++... .+..+- ..+++.+.++++.+. .+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999987 9999999999999999 5788878777654 345565322 222222 223333444443332 24799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.15  Score=41.82  Aligned_cols=81  Identities=25%  Similarity=0.316  Sum_probs=49.9

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++++||+|+ |.+|...+..+...|+ .++.++++.++.+. .+.+...  ..+..+-.+ +++...+.++.+.. +++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER-GPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            468999988 9999999988888898 57778787766543 3333211  122222222 22333333333222 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999974

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.88  E-value=0.16  Score=41.20  Aligned_cols=82  Identities=21%  Similarity=0.295  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++.++||+|+ |.+|...++.+...|.+ ++.+.+++++.+..    +..+... .+..+-. ..++.+.++++.. .-.
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVE-AFG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HhC
Confidence            3568999998 99999999988888995 88888887664432    2234322 2111211 2233333333322 224


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|.+++++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999999865

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.86  E-value=0.16  Score=41.27  Aligned_cols=82  Identities=22%  Similarity=0.365  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .+.+++|.|+ |.+|...+..+...|+ .|+.+++++++.+.. ++   .+.. ..+..+-. ..++.+.+++..+ .-.
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   83 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELG   83 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            3578999987 9999999998888899 688888877654432 22   2221 12222221 2223333333322 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|.+|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (239)
T PRK07666         84 SIDILINNAGI   94 (239)
T ss_pred             CccEEEEcCcc
Confidence            79999999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.86  E-value=0.19  Score=43.30  Aligned_cols=36  Identities=36%  Similarity=0.491  Sum_probs=31.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ...+|+|.|+|++|..+++.+...|...+..++.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            346899999999999999999999998888887763

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.86  E-value=0.17  Score=41.34  Aligned_cols=84  Identities=21%  Similarity=0.329  Sum_probs=51.9

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC--EEE--ecCC-CcccHHHHHHHHH
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD--NIV--KVST-NLQDIAEEVEKIQ  174 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~~--~~~~-~~~~~~~~~~~~~  174 (290)
                      ..++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+    +..+..  .++  +.+. ...++.+.++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            457889999987 9999999988888899 577888877654322    222321  122  2211 1223333333343


Q ss_pred             HHhCCCccEEEEccCC
Q 022879          175 KAMGTGIDVSFDCAGL  190 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~  190 (290)
                      + ...++|.+|.+.|.
T Consensus        88 ~-~~~~id~vi~~Ag~  102 (247)
T PRK08945         88 E-QFGRLDGVLHNAGL  102 (247)
T ss_pred             H-HhCCCCEEEECCcc
Confidence            2 23479999998864

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.86  E-value=0.2  Score=42.69  Aligned_cols=90  Identities=12%  Similarity=0.148  Sum_probs=61.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+++|.|.|.|.+|...++.++.+|+ .+.+.+.+.++.+     +.....    ...+    +.++.    ...|+|+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN  196 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence            67899999999999999999999999 5778776544321     111111    1112    33332    34799998


Q ss_pred             ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKTM-----STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +....+..     ...++.|+++..++.++...
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  229 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV  229 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence            88764322     24677899999999998654

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.11  Score=42.36  Aligned_cols=41  Identities=27%  Similarity=0.268  Sum_probs=33.3

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      .+++|+|+ |++|...+..+...|+ .|+.+++++++.+.+..
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~   43 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT   43 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            57899987 9999988888888899 58888888877765544

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.85  E-value=0.13  Score=42.46  Aligned_cols=82  Identities=21%  Similarity=0.283  Sum_probs=48.2

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCC---hhHHH-HHHHcCCCEEEecCC-CcccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVD---DYRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~---~~~~~-~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+   +++|.+.++.+...|++ ++.+...   +++.+ +.++++....+..|- ..++..+.++...+. -
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH-W   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-h
Confidence            4678999983   58999988888888995 6555432   23322 234445332232222 223344444444332 2


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +.+|+++++.|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            579999998874

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.83  E-value=0.5  Score=37.72  Aligned_cols=102  Identities=19%  Similarity=0.131  Sum_probs=62.9

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +++...++++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++    ++...+.....   +....   + 
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~-  139 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---W-  139 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---C-
Confidence            34456788999999998755 55555566553 3 68999999877665543    34322111111   11000   0 


Q ss_pred             HHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       .....||+|+-............+.|+++|+++..-
T Consensus       140 -~~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        140 -PAYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             -CcCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence             012569998876555556667888999999987653

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.16  Score=42.12  Aligned_cols=79  Identities=25%  Similarity=0.322  Sum_probs=47.4

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++||+|+ |++|...++.+...|. .|+.+++++++.+. .+   ..+... .+..+-.+ +++.+.+..+.. ...++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            6899988 9999999988888899 57777777665442 22   223221 22222212 222222222222 235799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99999884

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.81  E-value=0.17  Score=41.43  Aligned_cols=79  Identities=25%  Similarity=0.316  Sum_probs=50.0

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCE-EEecCC-CcccHHHHHHHHHHHhCCCccEEE
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      +++|+|+ |.+|...++.+...|+ .|+.+++++++.+.+.. ++... .+..+- ..+++.+.++++.+ ..+++|.++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA-EWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHH-HcCCCCEEE
Confidence            6899987 9999999999988999 58888888776654433 44321 222221 12233333333322 224699999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98874

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.096  Score=42.99  Aligned_cols=75  Identities=20%  Similarity=0.229  Sum_probs=45.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+++++|+|+ |++|...++.+...|+ .|+.+++++ +..+... .+....+..+-.  +.. .+.+.    -+++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~--~~~-~~~~~----~~~iDil   83 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECG--KEE-SLDKQ----LASLDVL   83 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCC--CHH-HHHHh----cCCCCEE
Confidence            3579999988 9999999998888999 577776665 2222211 111122222221  111 22221    2369999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |+++|.
T Consensus        84 VnnAG~   89 (245)
T PRK12367         84 ILNHGI   89 (245)
T ss_pred             EECCcc
Confidence            999975

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.14  Score=42.99  Aligned_cols=83  Identities=29%  Similarity=0.361  Sum_probs=48.8

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh---------hHH-HHHHHc---CCC-EEEecCC-CcccHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---------YRL-SVAKEI---GAD-NIVKVST-NLQDIAEE  169 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~---------~~~-~~~~~l---g~~-~~~~~~~-~~~~~~~~  169 (290)
                      -.++++||+|+ +++|.+.++.+...|++ ++.++.+.         ++. +..+++   +.. ..+..+- +.++..+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            35789999987 99999999988888994 66665442         222 222322   322 1222222 22233333


Q ss_pred             HHHHHHHhCCCccEEEEccCC
Q 022879          170 VEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       170 ~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +++..+.. +.+|++|++.|.
T Consensus        83 ~~~~~~~~-g~id~lv~nAG~  102 (286)
T PRK07791         83 VDAAVETF-GGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHhc-CCCCEEEECCCC
Confidence            44433322 469999999875

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.79  E-value=0.29  Score=41.85  Aligned_cols=90  Identities=22%  Similarity=0.308  Sum_probs=61.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|+++.|.|.|.||++.++.++.+|+ .++.-+++.. .+..+.++...+        ++.+.++        ..|++.-
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell~--------~sDii~l  206 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELLA--------ESDIISL  206 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHHH--------hCCEEEE
Confidence            48899999999999999999999999 5777777665 333344444321        1222222        3577754


Q ss_pred             -ccCCHHHH----HHHHHHhccCCEEEEeccCC
Q 022879          187 -CAGLNKTM----STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 -~~g~~~~~----~~~~~~l~~~G~~v~~g~~~  214 (290)
                       |-..+++.    ...++.|++++.+|..+...
T Consensus       207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~  239 (324)
T COG1052         207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG  239 (324)
T ss_pred             eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence             44443322    24788899999999998654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.79  E-value=0.23  Score=39.12  Aligned_cols=76  Identities=28%  Similarity=0.396  Sum_probs=47.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      ++.+++|.|+ |.+|...+..+...|. .++.++++.++.+.+ +.+    +.. +...+.  .+.. .+.+..    .+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence            5689999987 9999988888888887 677778887765543 223    222 111111  1111 222221    35


Q ss_pred             ccEEEEccCCH
Q 022879          181 IDVSFDCAGLN  191 (290)
Q Consensus       181 ~d~vid~~g~~  191 (290)
                      .|+||.++..+
T Consensus        98 ~diVi~at~~g  108 (194)
T cd01078          98 ADVVFAAGAAG  108 (194)
T ss_pred             CCEEEECCCCC
Confidence            89999998764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.74  E-value=0.14  Score=44.89  Aligned_cols=73  Identities=23%  Similarity=0.354  Sum_probs=54.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .+.++||.|+|-+|..++..+...|...++...++.++.. +++++++.. +.++    +    +.+.    -..+|+||
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~----e----l~~~----l~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALE----E----LLEA----LAEADVVI  243 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHH----H----HHHh----hhhCCEEE
Confidence            6789999999999999999999999888888888877755 678888443 2221    1    2211    14589999


Q ss_pred             EccCCHH
Q 022879          186 DCAGLNK  192 (290)
Q Consensus       186 d~~g~~~  192 (290)
                      -+++.+.
T Consensus       244 ssTsa~~  250 (414)
T COG0373         244 SSTSAPH  250 (414)
T ss_pred             EecCCCc
Confidence            9999854

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.73  E-value=0.19  Score=41.05  Aligned_cols=34  Identities=29%  Similarity=0.483  Sum_probs=29.7

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.+|+|.|+|++|..+++.+...|.+.+..++.+
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4789999999999999999999999888777554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.73  E-value=0.35  Score=35.93  Aligned_cols=32  Identities=31%  Similarity=0.545  Sum_probs=27.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +|+|.|+|++|...++.+...|.+.+..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            58899999999999999999999888887654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.72  E-value=0.17  Score=41.75  Aligned_cols=82  Identities=24%  Similarity=0.248  Sum_probs=47.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      ++.++||+|+ |.+|...++.+...|++ ++.+.+ +++..+ ..   +..+.. ..+..+-. .++..+.++.+.+ ..
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK-EF   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-Hc
Confidence            5789999987 99999999999999995 555544 333322 22   223322 12222222 2222333333322 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|+++++.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            469999999885

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.72  E-value=0.17  Score=43.14  Aligned_cols=81  Identities=25%  Similarity=0.377  Sum_probs=49.9

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCChhHHH-HHHHcCC--C--EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLS-VAKEIGA--D--NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~-~~~~lg~--~--~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      +.++||+|+ +++|.+.++.+...| . .|+.+.+++++.+ ..+++..  .  ..+..+-. .++..+.+.++.+ ...
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE-SGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence            568999988 999999888888889 7 5777777776554 3344431  1  12222221 2233333444322 235


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        81 ~iD~lI~nAG~   91 (314)
T TIGR01289        81 PLDALVCNAAV   91 (314)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.18  Score=41.54  Aligned_cols=79  Identities=27%  Similarity=0.351  Sum_probs=50.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ +++    +.. ..+..+-.  + .+.++++.+.. .
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS--S-PEAREQLAAEA-G   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC--C-HHHHHHHHHHh-C
Confidence            4689999988 9999999998888999 688888877665432 222    221 22222221  1 12233333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        81 ~id~lv~~ag~   91 (259)
T PRK06125         81 DIDILVNNAGA   91 (259)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.70  E-value=0.12  Score=45.60  Aligned_cols=76  Identities=13%  Similarity=0.245  Sum_probs=46.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-CEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+++++|+|+ |++|.+.++.+...|+ .++++++++++.+.. ..... ...+..+-.  +. +.+.+.    -+++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d~-~~v~~~----l~~IDi  248 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--QE-AALAEL----LEKVDI  248 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--CH-HHHHHH----hCCCCE
Confidence            4789999988 9999999998888899 577777776654322 11111 112222211  11 223332    136999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus       249 LInnAGi  255 (406)
T PRK07424        249 LIINHGI  255 (406)
T ss_pred             EEECCCc
Confidence            9998874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.69  E-value=0.15  Score=41.55  Aligned_cols=81  Identities=16%  Similarity=0.175  Sum_probs=47.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HH---HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VA---KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  181 (290)
                      +++||+|+ |.+|...++.+...|++.++...+++++.+ ..   +..+.. ..+..+-.+ ++..+.++++.+ ...++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence            47899988 999999999888889953333445554432 22   223322 222222222 233333343332 34679


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|.+.|.
T Consensus        81 d~vi~~ag~   89 (247)
T PRK09730         81 AALVNNAGI   89 (247)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=95.67  E-value=0.17  Score=41.27  Aligned_cols=82  Identities=22%  Similarity=0.264  Sum_probs=47.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      +++++||+|+ |.+|...++.+...|++ ++.+ .+++++.+ ..+.   .+.. ..+..+-.+ +.+.+.+++... .-
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   82 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN-HF   82 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-Hc
Confidence            3689999987 99999999988888995 5444 33444332 2222   2322 223222222 233333333322 22


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      ..+|++|.+.|.
T Consensus        83 ~~id~vi~~ag~   94 (247)
T PRK12935         83 GKVDILVNNAGI   94 (247)
T ss_pred             CCCCEEEECCCC
Confidence            468999999875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.67  E-value=0.15  Score=41.62  Aligned_cols=81  Identities=26%  Similarity=0.238  Sum_probs=46.1

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +++||+|+ |++|...++.+...|++.++...+++++.+.+    +..+.. ..+..+- ...++.+.++++.+. -.++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence            57999988 99999999988888995333344554443322    223322 1222222 122333333333222 2469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06947         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCcc
Confidence            999999873

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.64  E-value=0.12  Score=46.88  Aligned_cols=81  Identities=23%  Similarity=0.377  Sum_probs=52.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-----cCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .|++|||+|+ |++|...+.-....+.+.++..+.++.++..++.     ++......+=.+-.|.. .+.++.  .+.+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~-~~~~~~--~~~k  325 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRD-RVERAM--EGHK  325 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHH-HHHHHH--hcCC
Confidence            5899999987 9999887776667799899999999988765532     33222221112222322 233332  3557


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+||+++.-
T Consensus       326 vd~VfHAAA~  335 (588)
T COG1086         326 VDIVFHAAAL  335 (588)
T ss_pred             CceEEEhhhh
Confidence            9999998753

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.64  E-value=0.31  Score=40.46  Aligned_cols=106  Identities=17%  Similarity=0.210  Sum_probs=67.1

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .++...++.++.+||=.|+|. |..+..+++..++ .+++++.+++..+.+++... ...+.+..  .+..    +. ..
T Consensus        43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~-~~  113 (263)
T PTZ00098         43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KK-DF  113 (263)
T ss_pred             HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cC-CC
Confidence            345557788999999988754 5566777777777 69999999988887766321 11111100  1110    00 01


Q ss_pred             hCCCccEEEEcc-----C---CHHHHHHHHHHhccCCEEEEecc
Q 022879          177 MGTGIDVSFDCA-----G---LNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       177 ~~~~~d~vid~~-----g---~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....||+|+..-     +   ....+..+.+.|+|+|+++....
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            235699998621     1   12466778899999999998754

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.62  E-value=0.29  Score=40.42  Aligned_cols=97  Identities=23%  Similarity=0.290  Sum_probs=66.8

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      +......++++||=.|+|. |..+..+++.. +. .+++++.++...+.+++.+.+.+ .     .+.    .++.  ..
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~~   87 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--PK   87 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--CC
Confidence            4445667889999998866 67777888775 45 79999999999888877554322 1     121    1121  23


Q ss_pred             CCccEEEEccC-----C-HHHHHHHHHHhccCCEEEEe
Q 022879          179 TGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       179 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ..||+|+-...     . ...+..+.+.|+|+|.++..
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            57999987542     1 34567788999999999865

>PRK09135 pteridine reductase; Provisional

Probab=95.62  E-value=0.22  Score=40.54  Aligned_cols=82  Identities=16%  Similarity=0.097  Sum_probs=47.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH-H---HcCC--CEEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-K---EIGA--DNIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~-~---~lg~--~~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .+.++||+|+ |.+|..+++.+...|+ .++.++++ +++.+.+ +   ....  ...+..+-. .+++.+.++++.+ .
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA-A   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence            4578999988 9999999998888899 57777654 3333322 1   2211  112222222 2223333333322 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -.++|++|++.|.
T Consensus        83 ~~~~d~vi~~ag~   95 (249)
T PRK09135         83 FGRLDALVNNASS   95 (249)
T ss_pred             cCCCCEEEECCCC
Confidence            3468999999983

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.60  E-value=0.29  Score=39.88  Aligned_cols=105  Identities=21%  Similarity=0.236  Sum_probs=66.5

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .+..++++||-.|.|. |..++.+++.++ ...+++++.+++..+.+++    .|...-+.+  ...+..+.+.++....
T Consensus        64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~--~~gda~~~L~~l~~~~  140 (234)
T PLN02781         64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINF--IQSDALSALDQLLNND  140 (234)
T ss_pred             HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEccHHHHHHHHHhCC
Confidence            4566788999888744 667777777753 3479999999988777654    443322221  1234444444432211


Q ss_pred             -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879          178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  210 (290)
                       ...||+||-....   ...+..+++.++++|.++.-
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence             3579999765432   34567788999999988753

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.59  E-value=0.56  Score=37.56  Aligned_cols=103  Identities=21%  Similarity=0.324  Sum_probs=70.4

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEE-ecCCCcccHHHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIV-KVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~-~~~~~~~~~~~~~~~~~~~  176 (290)
                      ++..+.++||=.|.+ +|..++.+|..+. -.++++++.++++.+.+++    .|....+ ....  .+..+.+.+   .
T Consensus        55 ~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~--gdal~~l~~---~  128 (219)
T COG4122          55 ARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG--GDALDVLSR---L  128 (219)
T ss_pred             HHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec--CcHHHHHHh---c
Confidence            456688888888764 4888889999886 3379999999999887754    5644422 2211  244444433   2


Q ss_pred             hCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....||+||--...   +..+..+++.|+++|-++.=.
T Consensus       129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         129 LDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             cCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            34689999654332   357888999999999988654

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.58  E-value=0.83  Score=36.77  Aligned_cols=91  Identities=14%  Similarity=0.072  Sum_probs=54.6

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ++.+|||.|+|.++.-=++.+...|++ |.+++..  ++-.++. ..+.-..+.     .++..  .+     -.++++|
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~-~~~~i~~~~-----r~~~~--~d-----l~g~~LV   89 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLK-KYGNLKLIK-----GNYDK--EF-----IKDKHLI   89 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHH-hCCCEEEEe-----CCCCh--HH-----hCCCcEE
Confidence            577999999999998878888888994 6666333  2222222 223222222     11111  11     1468999


Q ss_pred             EEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          185 FDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |-|++.++.-.......+..+.++...
T Consensus        90 iaATdD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         90 VIATDDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence            999997654445555555667776654

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.58  E-value=0.24  Score=38.29  Aligned_cols=33  Identities=30%  Similarity=0.361  Sum_probs=28.7

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      +|+|.|+|++|...++.+...|...+..++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999999999999999999998788887664

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.58  E-value=0.41  Score=39.69  Aligned_cols=101  Identities=19%  Similarity=0.230  Sum_probs=65.5

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcC-------CCE--EEecCCCcccHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIG-------ADN--IVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-------~~~--~~~~~~~~~~~~~~~~~  172 (290)
                      ..++++++||-.|+|. |..+..+++..+. ..+++++.+++..+.+++-.       ...  .+.  ....+       
T Consensus        69 ~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~--~d~~~-------  138 (261)
T PLN02233         69 SGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIE--GDATD-------  138 (261)
T ss_pred             hCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEE--ccccc-------
Confidence            5678899999998765 5577778877653 27999999999888775421       111  111  11111       


Q ss_pred             HHHHhCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEeccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      + ....+.||.|+-..+-      ...+.++.+.|+|+|+++.+....
T Consensus       139 l-p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~  185 (261)
T PLN02233        139 L-PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK  185 (261)
T ss_pred             C-CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence            1 0123469999754321      346788999999999998876443

>PRK03612 spermidine synthase; Provisional

Probab=95.57  E-value=0.2  Score=46.02  Aligned_cols=99  Identities=15%  Similarity=0.147  Sum_probs=63.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----------CCEEEecCCCcccHHHHHHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-----------ADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      .+++++||+.|+|. |..+.++++.-+.+++++++-+++-.+.+++..           ...+ ..  ...|..+.+   
T Consensus       295 ~~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~v--i~~Da~~~l---  367 (521)
T PRK03612        295 SARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TV--VNDDAFNWL---  367 (521)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EE--EEChHHHHH---
Confidence            45678999998764 666677777645458999999999999887721           0111 10  012222222   


Q ss_pred             HHHhCCCccEEEEccCCH-----------HHHHHHHHHhccCCEEEEec
Q 022879          174 QKAMGTGIDVSFDCAGLN-----------KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ....++||+|+-....+           +.++.+.+.|+++|.++.-.
T Consensus       368 -~~~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        368 -RKLAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             -HhCCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence             22346899997644321           24567888999999988653

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.55  E-value=0.14  Score=42.76  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=52.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-----HcCC-C--EEEecCCCcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-----EIGA-D--NIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-----~lg~-~--~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      -|++.+|+|+ .++|.+-+.-+...|. .|+.++++++|++.++     +.++ .  .++|+...++++.+-.+++   .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l---~  123 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL---A  123 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh---c
Confidence            4688999998 8999765554444899 5999999999987663     2331 2  3445444433344333333   4


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      +-.+-+.++++|-
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            5567788999885

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.12  Score=41.84  Aligned_cols=74  Identities=18%  Similarity=0.337  Sum_probs=47.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++++||+|+ |.+|...++.+...|. .|+.++++.++     .+.. .++..+- ..++..+.+.++.+  ..+.|++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~vi   73 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAIV   73 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEEE
Confidence            578999988 9999999998888998 57777776554     1121 2222222 22233333444432  23689999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            99874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.55  E-value=0.22  Score=40.45  Aligned_cols=82  Identities=21%  Similarity=0.273  Sum_probs=46.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHH-HHH---HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLS-VAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .+.++||+|+ |.+|...+..+...|++ |+++.++ +++.+ ..+   ..+.. ..+..+-. .+++.+.++++.+ .-
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA-EF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            3568999988 99999999999889995 5444443 32222 222   22322 12221222 2223333333322 22


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|.++.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            468999999874

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.54  E-value=0.1  Score=41.22  Aligned_cols=97  Identities=19%  Similarity=0.260  Sum_probs=60.6

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ....++.+||-.|+|. |..+..+++. |. .|++++.+++..+.+++.    +...+.   ....++.    ++  ...
T Consensus        26 l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~---~~~~d~~----~~--~~~   93 (197)
T PRK11207         26 VKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH---TAVVDLN----NL--TFD   93 (197)
T ss_pred             cccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce---EEecChh----hC--CcC
Confidence            3455678999998866 7777888875 77 799999999877766542    221111   0011211    11  113


Q ss_pred             CCccEEEEccCC--------HHHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..||+|+.+..-        ...+..+.+.|+++|.++.+.
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            469999875331        235667888899999965543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.54  E-value=0.22  Score=40.40  Aligned_cols=81  Identities=20%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      ..++||+|+ |.+|...++.+...|.+.++.+.++++..+.+    +..+.. ..+..+-. .+++.+.+.++.+ .-.+
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~   84 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE-RFGR   84 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH-HcCC
Confidence            468999988 99999999998888995444444444433322    222322 22222222 2233333333322 2247


Q ss_pred             ccEEEEccC
Q 022879          181 IDVSFDCAG  189 (290)
Q Consensus       181 ~d~vid~~g  189 (290)
                      +|.+|.+.|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            999999887

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.54  E-value=0.18  Score=41.21  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=47.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +++++||+|+ |.+|...++.+...|+ .++.++++.     .+..+.. ..+..+-. .+++.+.++++.+ ...++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4678999988 9999999998888899 577776665     1222211 12222222 2233333444332 2356999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9999875

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.52  E-value=0.11  Score=42.97  Aligned_cols=78  Identities=21%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .++.++.++++.+.   ... ..+..+- ..+++.+.++++.+ .-+++|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~-~~~~~D~~~~~~~~~~~~~~~~-~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENY-QFVPTDVSSAEEVNHTVAEIIE-KFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---Cce-EEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            4678999987 9999999999988999 57777666554321   111 1222222 12233333333322 22479999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        82 i~~Ag~   87 (266)
T PRK06171         82 VNNAGI   87 (266)
T ss_pred             EECCcc
Confidence            999874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.52  E-value=0.1  Score=44.03  Aligned_cols=36  Identities=22%  Similarity=0.369  Sum_probs=30.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .+++++|.|+|++|.+++..+...|++.++++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999998888889997688888875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.52  E-value=0.21  Score=38.91  Aligned_cols=81  Identities=21%  Similarity=0.395  Sum_probs=52.2

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCC--CE-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGA--DN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~--~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ...+|.|+ +++|.+..|++...|++ +++.+.+. +..+.++.|+.  ++ .+..+-+ ..+....++++.+.- +.++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Gar-v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~ps   92 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGAR-VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-GTPS   92 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcE-EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc-CCCc
Confidence            45677776 99999999999999995 66665544 45566777775  22 2222222 223333355554433 4799


Q ss_pred             EEEEccCCH
Q 022879          183 VSFDCAGLN  191 (290)
Q Consensus       183 ~vid~~g~~  191 (290)
                      ++++|.|..
T Consensus        93 vlVncAGIt  101 (256)
T KOG1200|consen   93 VLVNCAGIT  101 (256)
T ss_pred             EEEEcCccc
Confidence            999999873

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=95.51  E-value=0.19  Score=41.52  Aligned_cols=82  Identities=17%  Similarity=0.221  Sum_probs=46.2

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCC------hhHHHHHHHc-CCCEEEecCCC-cccHHHHHHHHHH
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVD------DYRLSVAKEI-GADNIVKVSTN-LQDIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~------~~~~~~~~~l-g~~~~~~~~~~-~~~~~~~~~~~~~  175 (290)
                      .+++++|+|+   +++|.+.++.+...|++ |+.+..+      ++..+.+++. +....+..|-. .++..+.+++..+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4678999986   48999999988889995 5555322      2222222222 21122222222 2233333444333


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      . .+.+|+++++.|.
T Consensus        84 ~-~g~iD~lv~nag~   97 (258)
T PRK07370         84 K-WGKLDILVHCLAF   97 (258)
T ss_pred             H-cCCCCEEEEcccc
Confidence            2 2479999999873

>PLN02244 tocopherol O-methyltransferase

Probab=95.50  E-value=0.39  Score=41.55  Aligned_cols=98  Identities=16%  Similarity=0.245  Sum_probs=62.4

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +++++||=.|+|. |..+..+++..|+ .+++++.++...+.+++.    +...-+.+..  .+..    ++ ....+.|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~----~~-~~~~~~F  187 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADAL----NQ-PFEDGQF  187 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCcc----cC-CCCCCCc
Confidence            6788998888765 6677788887788 699999999877766542    3211111100  1110    00 0123579


Q ss_pred             cEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          182 DVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       182 d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      |+|+..-..      ...+..+.+.|+|+|+++....
T Consensus       188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            999864321      2467788999999999988653

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.49  E-value=0.42  Score=37.85  Aligned_cols=35  Identities=26%  Similarity=0.465  Sum_probs=30.6

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|...++.+...|...++.++.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            44789999999999999999999999878888776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.49  E-value=0.24  Score=40.80  Aligned_cols=82  Identities=16%  Similarity=0.308  Sum_probs=48.4

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD--YR-LSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .+++++|+|+   +++|.+.++.+...|+ .|+.++++.  +. .+..++++.. ..+..+-. .++..+.+++..+ ..
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVRE-HV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999985   7999999998888999 577765442  32 2333444421 12222222 2233333333322 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            579999998874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.48  E-value=0.24  Score=40.37  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=47.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEE-EeCCh-hHHHHHH---HcCCCEE-EecCCC-cccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVI-VDVDD-YRLSVAK---EIGADNI-VKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~-v~~~~-~~~~~~~---~lg~~~~-~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++++||+|+ |.+|...++.+...|++ ++. ..+++ ...+.++   ..+.... +..+-. .++..+.+++..+. .+
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFK-VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            578899987 99999999999999995 444 33333 3333333   2343321 122221 22333333333332 35


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        81 ~id~li~~ag~   91 (246)
T PRK12938         81 EIDVLVNNAGI   91 (246)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PLN03075 nicotianamine synthase; Provisional

Probab=95.48  E-value=0.13  Score=43.13  Aligned_cols=99  Identities=21%  Similarity=0.259  Sum_probs=66.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcC-C----CEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIG-A----DNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-~----~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      .++++|+-.|.|+.+..++-+++.... ..+++++.+++..+.++++- .    ..-+.+..  .+..+    .. ....
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~-~~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VT-ESLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----cc-cccC
Confidence            378999999999889888888865533 37999999999888887643 1    11122211  22211    10 0125


Q ss_pred             CccEEEEcc-------CCHHHHHHHHHHhccCCEEEEec
Q 022879          180 GIDVSFDCA-------GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       180 ~~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      +||+||-.+       .....+..+.+.|+++|.++.=.
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            799998765       22346788999999999988654

>PRK08328 hypothetical protein; Provisional

Probab=95.48  E-value=0.27  Score=39.99  Aligned_cols=35  Identities=26%  Similarity=0.446  Sum_probs=30.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      .+.+|+|.|+|++|..+++.+...|.+.+..++.+
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45789999999999999999999999988888643

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.47  E-value=0.26  Score=42.89  Aligned_cols=36  Identities=31%  Similarity=0.487  Sum_probs=31.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ...+|||.|+|++|..+++.+...|.+.+..++.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            447999999999999999999999999888886653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.47  E-value=0.24  Score=40.28  Aligned_cols=81  Identities=28%  Similarity=0.360  Sum_probs=47.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      +.++||.|+ |.+|...+..+...|++ ++.+ ++++++.+.+ ..   .+.. .++..+-.+ +++.+.+..+.. ...
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE-KFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence            468999988 99999998887788995 6666 7776654332 22   2221 122222222 223233333322 123


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.27  Score=41.36  Aligned_cols=83  Identities=19%  Similarity=0.186  Sum_probs=47.9

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-HHH----HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~----~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      -++.++||+|+ |.+|...++.+...|+ .|+.+.+++. ..+    .++..+... .+..+-.+ +++.+.++++... 
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-  121 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-  121 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            34679999988 9999999998888899 4666655532 111    222223221 22222222 2233333333222 


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      ..++|++|++.|.
T Consensus       122 ~~~iD~lI~~Ag~  134 (290)
T PRK06701        122 LGRLDILVNNAAF  134 (290)
T ss_pred             cCCCCEEEECCcc
Confidence            2469999998874

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.47  E-value=0.29  Score=40.15  Aligned_cols=35  Identities=29%  Similarity=0.457  Sum_probs=30.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|..++..+...|...+..++.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45799999999999999999999999888777543

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.47  E-value=0.24  Score=42.12  Aligned_cols=98  Identities=15%  Similarity=0.113  Sum_probs=64.5

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      -....+++|.|+|..|.+.++.+. ..+.+.+.+.++++++.+ +++.+....+ ...  ..+..+.+        ...|
T Consensus       122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av--------~~aD  190 (304)
T PRK07340        122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP--------EAVD  190 (304)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------hcCC
Confidence            356679999999999988888775 478878888889887755 4444432110 000  12232222        3689


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879          183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      +|+.|+.++..+-..  .++++-.+..+|....
T Consensus       191 iVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p  221 (304)
T PRK07340        191 LVVTATTSRTPVYPE--AARAGRLVVAVGAFTP  221 (304)
T ss_pred             EEEEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence            999999886544333  3788888888886543

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.46  E-value=0.37  Score=40.39  Aligned_cols=58  Identities=21%  Similarity=0.393  Sum_probs=45.2

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEe
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +...+++|.+|+=--+|+.|.+.+.+|+.+|++.++++  .-+.+|..+++.+|+.-+..
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            34668999965554459999999999999999755555  45678999999999886654

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.46  E-value=0.1  Score=43.12  Aligned_cols=96  Identities=21%  Similarity=0.274  Sum_probs=61.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .++.+||-.|+|. |..+..+++. |. .|++++.+++..+.+++.    +.. .+....   .+.    .++.......
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~----~~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAA----QDIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCH----HHHhhhcCCC
Confidence            4567888888766 7778888875 76 699999999988877652    211 111111   121    1111112457


Q ss_pred             ccEEEEccC-----C-HHHHHHHHHHhccCCEEEEec
Q 022879          181 IDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       181 ~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ||+|+....     . ...+..+.+.|+|+|.++.+-
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            999985422     1 245778899999999998653

>PRK05855 short chain dehydrogenase; Validated

Probab=95.45  E-value=0.18  Score=46.69  Aligned_cols=82  Identities=24%  Similarity=0.273  Sum_probs=51.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+    +..|.. ..+..+-.+ ++..+.+.++.+ ..+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence            4578999988 9999999988888999 588888887665433    223322 222222222 223333333322 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|++|+++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            69999999885

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=95.45  E-value=0.55  Score=37.64  Aligned_cols=108  Identities=19%  Similarity=0.163  Sum_probs=70.3

Q ss_pred             CCCCeEEEEC--C-CHHHHHHHHHHHHCCCCeEEEEeCChh---H-HHHHHHcCCCEEEecCCCcc-cHHHHHHHHHHHh
Q 022879          106 GPETNVLIMG--A-GPIGLVTMLAARAFGAPRIVIVDVDDY---R-LSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~G--a-g~vG~~ai~la~~~g~~~vv~v~~~~~---~-~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~  177 (290)
                      -.|++.||.|  . .+++.-.++.++..|++ +..+--.++   + .+++++++.+.++..+-.++ +..+...++ +..
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i-~~~   81 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI-KKK   81 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH-HHh
Confidence            4689999997  3 78999999999999996 444433332   2 34566788777776554333 333333333 334


Q ss_pred             CCCccEEEEccCCHH-----------------------------HHHHHHHHhccCCEEEEeccCCC
Q 022879          178 GTGIDVSFDCAGLNK-----------------------------TMSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       178 ~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      -+++|.++.+++-..                             ....+...|.++|.++.+...+.
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs  148 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS  148 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence            568999999886521                             22335567788999998875543

>PRK12744 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.19  Score=41.28  Aligned_cols=82  Identities=16%  Similarity=0.162  Sum_probs=45.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC----hhH-HHHHH---HcCCC-EEEecCCC-cccHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD----DYR-LSVAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~----~~~-~~~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~  175 (290)
                      .+.++||+|+ |++|...++.+...|++ ++.+..+    .++ .+..+   ..+.. ..+..+-. .++..+.+.+..+
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~-vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAK-AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCc-EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            4678999987 99999999998888996 4444321    122 22222   23322 12222221 2223333333322


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                       ..+++|++|++.|.
T Consensus        86 -~~~~id~li~~ag~   99 (257)
T PRK12744         86 -AFGRPDIAINTVGK   99 (257)
T ss_pred             -hhCCCCEEEECCcc
Confidence             22479999999985

>TIGR02415 23BDH acetoin reductases

Probab=95.43  E-value=0.28  Score=40.14  Aligned_cols=80  Identities=19%  Similarity=0.268  Sum_probs=48.5

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~  181 (290)
                      ++++|+|+ |.+|...++.+...|+ .++.+.+++++.+ ..+   ..+.. ..+..+-. .++..+.+.++.+. ..++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence            36899987 9999999998888999 5777777765443 222   22322 12222222 22333334444332 2468


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.43  E-value=0.17  Score=42.53  Aligned_cols=36  Identities=17%  Similarity=0.236  Sum_probs=30.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .++++||.|+|+.+.+++..+...|++.+.++.+++
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            567999999988898877777778998888888884

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.24  Score=41.20  Aligned_cols=82  Identities=26%  Similarity=0.321  Sum_probs=48.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-------H-HH---HHHcCCC-EEEecCC-CcccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-------L-SV---AKEIGAD-NIVKVST-NLQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-------~-~~---~~~lg~~-~~~~~~~-~~~~~~~~~~~  172 (290)
                      ++.++||+|+ |++|...++.+...|+ .++.++++.++       . +.   ++..+.. ..+..+- ..++..+.+++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999988 9999999998888899 57777665432       1 11   2223322 1222221 22233333333


Q ss_pred             HHHHhCCCccEEEEccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~  190 (290)
                      +.+.. +.+|++|++.|.
T Consensus        84 ~~~~~-g~id~li~~ag~  100 (273)
T PRK08278         84 AVERF-GGIDICVNNASA  100 (273)
T ss_pred             HHHHh-CCCCEEEECCCC
Confidence            32222 369999999875

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=95.40  E-value=0.077  Score=43.15  Aligned_cols=105  Identities=25%  Similarity=0.337  Sum_probs=62.4

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ....++|++||=.|+|. |..+..+++..+.+ .|++++-+++-++.+++    .+...+.-...+.+++.        .
T Consensus        42 ~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp--------~  112 (233)
T PF01209_consen   42 LLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP--------F  112 (233)
T ss_dssp             HHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB----------S
T ss_pred             ccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc--------C
Confidence            35678899999987755 67788888887642 79999999998887764    22221111112222211        1


Q ss_pred             hCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEeccCCC
Q 022879          177 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       177 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      .++.||+|.-+.|-      ...+.++.+.|+|+|+++.+.....
T Consensus       113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p  157 (233)
T PF01209_consen  113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKP  157 (233)
T ss_dssp             -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-
T ss_pred             CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCC
Confidence            24569999876654      2468889999999999998875443

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.38  E-value=0.17  Score=39.48  Aligned_cols=94  Identities=19%  Similarity=0.252  Sum_probs=57.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++.+||=.|+|+ |..++.+++......+++++.+++..+.++    +.+...+....   .+..    ++  .....+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~---~d~~----~~--~~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN---GRAE----DF--QHEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe---cchh----hc--cccCCcc
Confidence            378888888755 566666666554347999999998766553    34533221111   1211    11  1235799


Q ss_pred             EEEEccC--CHHHHHHHHHHhccCCEEEEe
Q 022879          183 VSFDCAG--LNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       183 ~vid~~g--~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +|+-..-  -+..+..+.+.|+++|+++..
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            9976531  134566678889999999876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.38  E-value=0.63  Score=32.99  Aligned_cols=92  Identities=17%  Similarity=0.156  Sum_probs=60.3

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      |+|.|.|.+|...++.++..+. .+++++.++++.+.++..+.. ++.-+..+.+   .+++   .+-...+.++-+++.
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~---~l~~---a~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDPE---VLER---AGIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSHH---HHHH---TTGGCESEEEEESSS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhhh---HHhh---cCccccCEEEEccCC
Confidence            5788999999999999999665 799999999999999888844 4433332222   2322   244578889888886


Q ss_pred             HHHHHH---HHHHhccCCEEEEe
Q 022879          191 NKTMST---ALGATCAGGKVCLV  210 (290)
Q Consensus       191 ~~~~~~---~~~~l~~~G~~v~~  210 (290)
                      +..-..   .++.+.+..+++..
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEE
Confidence            432222   33334455566544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.36  E-value=0.42  Score=38.27  Aligned_cols=104  Identities=17%  Similarity=0.193  Sum_probs=61.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEE------e-cCCCccc-HHHHHHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIV------K-VSTNLQD-IAEEVEKIQKA  176 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~------~-~~~~~~~-~~~~~~~~~~~  176 (290)
                      .++.++|+.|+|. |.-++-||. .|. .|++++.++...+.+ ++-+.....      . +....-+ +...+.++...
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5778999998876 778888875 699 699999999888764 222211000      0 0000000 00001001000


Q ss_pred             hCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEecc
Q 022879          177 MGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       177 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....||.|+|+..-        +..+..+.+.|+|+|++...+.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            12458999996531        2356788899999998777654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.34  E-value=0.4  Score=38.87  Aligned_cols=33  Identities=30%  Similarity=0.424  Sum_probs=29.0

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      ..+|+|.|+|++|..++..+...|...+..++.
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            579999999999999999999999988877743

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.32  E-value=0.58  Score=36.55  Aligned_cols=99  Identities=21%  Similarity=0.336  Sum_probs=62.2

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ....+.++.+||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+-.. .  .+...   .    
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~-~--~d~~~---~----   93 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDII-P--GEAPI---E----   93 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEE-e--cCchh---h----
Confidence            334567888988888765 6677777776543379999999987776643    332222111 1  11111   1    


Q ss_pred             hCCCccEEEEccC---CHHHHHHHHHHhccCCEEEEe
Q 022879          177 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ....+|+|+....   ....+..+.+.|+++|+++..
T Consensus        94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            1246999986432   124567788999999998764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.32  E-value=0.16  Score=41.23  Aligned_cols=80  Identities=24%  Similarity=0.272  Sum_probs=46.1

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HHHHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      +++||+|+ |.+|...++.+...|+ .++++.+ ++++.+ ...++   +.. ..+..+-. .+++.+.++++.+ ...+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEA-ELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH-HcCC
Confidence            46899987 9999999999988999 4666555 443332 22222   211 12222222 2223333333332 2356


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            9999999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.31  E-value=0.2  Score=36.83  Aligned_cols=95  Identities=22%  Similarity=0.295  Sum_probs=55.6

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh-------------------hHHHH----HHHcC-CCEEEecCCCc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-------------------YRLSV----AKEIG-ADNIVKVSTNL  163 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~~~~----~~~lg-~~~~~~~~~~~  163 (290)
                      ..+|+|.|+|++|...+..+...|...+..++.+.                   .|.+.    ++++. ...+..+.   
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~---   78 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP---   78 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence            46899999999999999998888998888775432                   12222    22232 22222221   


Q ss_pred             ccH-HHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEE
Q 022879          164 QDI-AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL  209 (290)
Q Consensus       164 ~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~  209 (290)
                      ..+ .+...++.    .++|+||+|+...+....+.+.+...+.-..
T Consensus        79 ~~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i  121 (135)
T PF00899_consen   79 EKIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFI  121 (135)
T ss_dssp             SHCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEE
T ss_pred             cccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEE
Confidence            122 12233332    3689999999985554455555555554433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.29  E-value=1.1  Score=37.33  Aligned_cols=99  Identities=22%  Similarity=0.229  Sum_probs=60.5

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..++++++||=.|+|+ |..++.+++.++ ...+++++.++++.+.++    .+|...+.....   |.. .+..    .
T Consensus        67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~-~~~~----~  137 (264)
T TIGR00446        67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGR-VFGA----A  137 (264)
T ss_pred             hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHH-Hhhh----h
Confidence            4678899988887755 545556666553 236999999999987664    456543322211   211 1111    1


Q ss_pred             CCCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCEEEEe
Q 022879          178 GTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 ~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ...||.|+-   |+|.                         .+.+..+++.++++|+++..
T Consensus       138 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs  198 (264)
T TIGR00446       138 VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS  198 (264)
T ss_pred             ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            235998864   3442                         12566788899999998754

>PLN02476 O-methyltransferase

Probab=95.28  E-value=0.54  Score=39.23  Aligned_cols=105  Identities=21%  Similarity=0.233  Sum_probs=67.8

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .+..+.++||-.|.+. |..++.+++.++.. .+++++.+++..+.++    +.|..+-+.+  ...+..+.+.++....
T Consensus       114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~l--i~GdA~e~L~~l~~~~  190 (278)
T PLN02476        114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNV--KHGLAAESLKSMIQNG  190 (278)
T ss_pred             HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhcc
Confidence            4566788999988743 77777888876422 6899999998877774    3554422221  1234444555443211


Q ss_pred             -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEe
Q 022879          178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  210 (290)
                       ...||.||--...   ...+..+++.|+++|.++.=
T Consensus       191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence             3579999665443   23567788899999998754

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.27  E-value=0.64  Score=35.44  Aligned_cols=91  Identities=18%  Similarity=0.183  Sum_probs=58.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      .+|.+.|.|.+|...++-+...|. .+.+.++++++.+.+.+.|+...       .+..+.++        ..|+||-|+
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~--------~~dvvi~~v   65 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAE--------QADVVILCV   65 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHH--------HBSEEEE-S
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhh--------cccceEeec
Confidence            368888999999999988888899 68889999999888877774322       12222221        258999999


Q ss_pred             CCHHHHHHHHH------HhccCCEEEEeccCCC
Q 022879          189 GLNKTMSTALG------ATCAGGKVCLVGMGHH  215 (290)
Q Consensus       189 g~~~~~~~~~~------~l~~~G~~v~~g~~~~  215 (290)
                      .........+.      .+.++..++.++....
T Consensus        66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p   98 (163)
T PF03446_consen   66 PDDDAVEAVLFGENILAGLRPGKIIIDMSTISP   98 (163)
T ss_dssp             SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS--H
T ss_pred             ccchhhhhhhhhhHHhhccccceEEEecCCcch
Confidence            87655555433      3455667777765543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.28  Score=41.04  Aligned_cols=83  Identities=18%  Similarity=0.228  Sum_probs=57.2

Q ss_pred             HHHhcCC-CCCCeEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879           99 ACRRANI-GPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus        99 ~l~~~~~-~~~~~vlI~Gag~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .++...+ -.|.+++|.|.|. +|.-++.++...|+. |.+..+..                     .++.+.+      
T Consensus       148 ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~l~~~~------  199 (286)
T PRK14175        148 ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KDMASYL------  199 (286)
T ss_pred             HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hhHHHHH------
Confidence            3444332 4789999999855 999999999999994 55543321                     1222221      


Q ss_pred             hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       177 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                        +..|+||.++|.+..+..  +.++++..++.+|..
T Consensus       200 --~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        200 --KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             --hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence              358999999998655554  458888888888854

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.26  E-value=0.24  Score=47.03  Aligned_cols=82  Identities=23%  Similarity=0.342  Sum_probs=51.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCCE--EEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGADN--IVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~--~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +.    .+...  .+..+-. .+++.+.+.+... .
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~-~  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL-A  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH-h
Confidence            4688999987 9999999998888899 578888877665433 22    23211  2222221 2233333333322 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|++|++.|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence            3479999999985

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.24  Score=40.31  Aligned_cols=78  Identities=18%  Similarity=0.193  Sum_probs=47.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .+++|+|+ |++|...++.+...|+ .|+++++++++.+.+ +.+    +.. ..+..+-.+.   +.++++.+.....+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDT---ASHAAFLDSLPALP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh---HHHHHHHHHHhhcC
Confidence            47899987 9999999998888899 588888887665432 221    111 2222221111   22333322223357


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++.+.|.
T Consensus        78 d~vv~~ag~   86 (243)
T PRK07102         78 DIVLIAVGT   86 (243)
T ss_pred             CEEEECCcC
Confidence            999998764

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.3  Score=40.71  Aligned_cols=79  Identities=20%  Similarity=0.329  Sum_probs=47.3

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  181 (290)
                      +++++|+|+|++|...++.+. .|. .|+.+++++++.+.+ +++   +.. ..+..+-.+ ++..+.+++. +. -+++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence            357888999999999988875 788 577777876654422 222   322 222222222 2333333333 21 2469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        78 d~li~nAG~   86 (275)
T PRK06940         78 TGLVHTAGV   86 (275)
T ss_pred             CEEEECCCc
Confidence            999999985

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.25  E-value=0.14  Score=46.34  Aligned_cols=77  Identities=22%  Similarity=0.344  Sum_probs=52.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh---------------------hHHHHHHHcCCCEEEecCCCccc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD---------------------YRLSVAKEIGADNIVKVSTNLQD  165 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~  165 (290)
                      .+++|+|.|+|+.|+.++..++..|.+ ++..+..+                     ...+.++.+|.+..++..- ..+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence            578999999999999999999999994 77776543                     2456677888765433111 111


Q ss_pred             HHHHHHHHHHHhCCCccEEEEccCCH
Q 022879          166 IAEEVEKIQKAMGTGIDVSFDCAGLN  191 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~d~vid~~g~~  191 (290)
                      +  .+.++.    ..+|.||.++|..
T Consensus       218 ~--~~~~~~----~~~D~vilAtGa~  237 (467)
T TIGR01318       218 I--SLDDLL----EDYDAVFLGVGTY  237 (467)
T ss_pred             c--CHHHHH----hcCCEEEEEeCCC
Confidence            1  122221    3599999999974

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.28  Score=39.93  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=46.6

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH----HHHcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      +.++||+|+ |.+|...++.+...|+. ++.+. +++++.+.    ++..+... .+..+-. .+++.+.+.++.+. ..
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence            457999987 99999999888888985 44443 44433322    23334321 2222221 22333333333322 24


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06123         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCCC
Confidence            69999999875

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.23  E-value=0.31  Score=42.76  Aligned_cols=35  Identities=40%  Similarity=0.511  Sum_probs=31.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      .+.+|+|.|+|++|..++..+...|.+.+..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999988888776

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.23  E-value=0.7  Score=33.47  Aligned_cols=92  Identities=22%  Similarity=0.215  Sum_probs=52.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCChh---HHHHHHHcCCC--EEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDY---RLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~~---~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|.|+|+ |-+|...++.+.. -+.+.+-++++++.   ..+.-+..+..  .+..    ..+    ++++.    ...|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v----~~~----l~~~~----~~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV----TDD----LEELL----EEAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE----BS-----HHHHT----TH-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc----chh----HHHhc----ccCC
Confidence            6899999 9999999999988 68865556666551   11111112211  1111    112    33321    2288


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++||.+. ++.....++.+...|.-+..|..+
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence            9999985 566666666666667777777544

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.22  E-value=0.47  Score=39.74  Aligned_cols=89  Identities=22%  Similarity=0.276  Sum_probs=55.4

Q ss_pred             eEEEECCCHHHHHH-HHHHHHCCCCeEEEEeCChhH--HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Gag~vG~~a-i~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      ++.|.|+|.+|... ..+.+..+++.+.+++.++++  .++.+++|.....      .++...+      ....+|+||+
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e~ll------~~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVDGLL------ANPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHHHHh------cCCCCCEEEE
Confidence            68889999999754 566666677544445555544  4567778855332      1222222      1246999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +++...+.......+..+=.++..
T Consensus        71 aTp~~~H~e~a~~al~aGk~VIde   94 (285)
T TIGR03215        71 ATSAKAHARHARLLAELGKIVIDL   94 (285)
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEC
Confidence            999876666666666554444433

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.19  E-value=0.23  Score=38.27  Aligned_cols=93  Identities=18%  Similarity=0.304  Sum_probs=59.4

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|.|.|+ |-+|...++-|..+|- .|+++.++++|....+.+-   ++.  ..--++.+ +.+    .-.++|+||++.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~---i~q--~Difd~~~-~a~----~l~g~DaVIsA~   70 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVT---ILQ--KDIFDLTS-LAS----DLAGHDAVISAF   70 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccce---eec--ccccChhh-hHh----hhcCCceEEEec
Confidence            5778888 9999999999999999 5888889999876532221   111  00011111 111    125899999998


Q ss_pred             CCH---------HHHHHHHHHhccC--CEEEEeccC
Q 022879          189 GLN---------KTMSTALGATCAG--GKVCLVGMG  213 (290)
Q Consensus       189 g~~---------~~~~~~~~~l~~~--G~~v~~g~~  213 (290)
                      |..         ...+.++..|+.-  -|+..+|..
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence            764         1233466666653  477777753

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.16  E-value=0.13  Score=42.77  Aligned_cols=75  Identities=16%  Similarity=0.183  Sum_probs=51.7

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      +++......+++++|.|+|+.+.+++.-+..+|+..+.++.+++++.+.+ +.++..           +...+      .
T Consensus       113 ~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~------~  175 (272)
T PRK12550        113 LLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL------G  175 (272)
T ss_pred             HHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc------c
Confidence            34433444567899999999999999999999998899998998876654 334311           00011      1


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      ...+|+|++|+..
T Consensus       176 ~~~~dlvINaTp~  188 (272)
T PRK12550        176 GIEADILVNVTPI  188 (272)
T ss_pred             cccCCEEEECCcc
Confidence            2358999999863

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.15  E-value=0.15  Score=48.09  Aligned_cols=77  Identities=22%  Similarity=0.292  Sum_probs=53.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEecCCCccc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQD  165 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~  165 (290)
                      .+++|+|.|+|+.|+.++..++..|.+ |++.+..+.                     ..++++.+|.+..++..- ..+
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  386 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD  386 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence            489999999999999999999999994 777766652                     456667788765443211 111


Q ss_pred             HHHHHHHHHHHhCCCccEEEEccCCH
Q 022879          166 IAEEVEKIQKAMGTGIDVSFDCAGLN  191 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~d~vid~~g~~  191 (290)
                      .  .+.++    ...+|.||.++|..
T Consensus       387 ~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        387 I--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  12222    13699999999963

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.13  E-value=0.29  Score=43.21  Aligned_cols=83  Identities=22%  Similarity=0.301  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-------HHHHcCCCEEEecCCCcccHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-------VAKEIGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       104 ~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-------~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ....+.+|||+|+ |.+|..+++.+...|. .|+++.++..+.+       ..+......++..+-.+.   +.+.++.+
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~---~~l~~~~~  131 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA---DSLRKVLF  131 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH---HHHHHHHH
Confidence            3456789999988 9999999998888898 5777777654321       111222222232222222   23333322


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      ..+.++|+||+|++.
T Consensus       132 ~~~~~~D~Vi~~aa~  146 (390)
T PLN02657        132 SEGDPVDVVVSCLAS  146 (390)
T ss_pred             HhCCCCcEEEECCcc
Confidence            112269999998864

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.11  E-value=0.45  Score=36.55  Aligned_cols=77  Identities=14%  Similarity=0.175  Sum_probs=51.9

Q ss_pred             CCCCCeEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          105 IGPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       105 ~~~~~~vlI~Gag~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      --.+.++||.|+|. +|..++.+++..|+ .+.++.++.                     +++.+.+        ..+|+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------~~l~~~l--------~~aDi   90 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------KNLKEHT--------KQADI   90 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------hhHHHHH--------hhCCE
Confidence            45889999999986 59989999999999 566665431                     1111111        34899


Q ss_pred             EEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          184 SFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       184 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ||.+++.+..+..  +.++++-.++.++..
T Consensus        91 VIsat~~~~ii~~--~~~~~~~viIDla~p  118 (168)
T cd01080          91 VIVAVGKPGLVKG--DMVKPGAVVIDVGIN  118 (168)
T ss_pred             EEEcCCCCceecH--HHccCCeEEEEccCC
Confidence            9999998653322  346666666677644

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK05599 hypothetical protein; Provisional

Probab=95.11  E-value=0.36  Score=39.48  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=47.0

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~  181 (290)
                      ++||+|+ +++|.+.++.+. .|. .|+.+++++++.+.+ +   +.+..  ..+..|-.+ ++..+.+.++.+ ..+++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~i   78 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQE-LAGEI   78 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHH-hcCCC
Confidence            5899987 999988888665 487 577777877665533 2   23322  233333222 233333333332 23579


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        79 d~lv~nag~   87 (246)
T PRK05599         79 SLAVVAFGI   87 (246)
T ss_pred             CEEEEecCc
Confidence            999998875

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.31  Score=39.95  Aligned_cols=84  Identities=19%  Similarity=0.311  Sum_probs=48.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC-EEEecCC-CcccHHHHHHHHHHHh--
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAM--  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~~~~~~~~~--  177 (290)
                      .+.+++|+|+ |.+|...++.+...|.+.++...++.++.+ ..+.+   +.. ..+..+- ..+++.+.+++..+..  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            3578999988 999999999888889853333455555433 32332   211 1222222 2223333333332211  


Q ss_pred             ---CCCccEEEEccCC
Q 022879          178 ---GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ---~~~~d~vid~~g~  190 (290)
                         ..++|++|++.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence               1469999999875

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.10  E-value=0.81  Score=37.74  Aligned_cols=100  Identities=24%  Similarity=0.277  Sum_probs=66.5

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHHhC
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      +....+.++++||=.|+|. |..+..+++..+...+++++.++...+.+++... ..++.     .+.    .++.  ..
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~----~~~~--~~   91 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADI----ASWQ--PP   91 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cch----hccC--CC
Confidence            3445567889999998765 6677788887654489999999998887766422 22222     111    1111  23


Q ss_pred             CCccEEEEccCC------HHHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+|+|+-...-      ...+..+.+.|+++|.++...
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~  130 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM  130 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence            479999765432      246778889999999998753

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.08  E-value=1.5  Score=35.62  Aligned_cols=34  Identities=24%  Similarity=0.445  Sum_probs=29.6

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ..+|+|.|.|++|..+++.+...|...+..++.+
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999888888654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.06  E-value=0.59  Score=39.92  Aligned_cols=86  Identities=15%  Similarity=0.169  Sum_probs=57.6

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|+++.|.|-|.+|...+++++.+|+ .|++.+.....     ....        ...++    .++.    ...|+|+-
T Consensus       146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~-----~~~~--------~~~~l----~ell----~~sDiv~l  203 (314)
T PRK06932        146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGAS-----VCRE--------GYTPF----EEVL----KQADIVTL  203 (314)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCccc-----cccc--------ccCCH----HHHH----HhCCEEEE
Confidence            46899999999999999999999999 57777543211     0000        01123    2322    23688887


Q ss_pred             ccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKT-----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +....+.     -...++.|+++..++.++...
T Consensus       204 ~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~  236 (314)
T PRK06932        204 HCPLTETTQNLINAETLALMKPTAFLINTGRGP  236 (314)
T ss_pred             cCCCChHHhcccCHHHHHhCCCCeEEEECCCcc
Confidence            7664322     235788999999999998654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.06  E-value=0.31  Score=41.41  Aligned_cols=81  Identities=23%  Similarity=0.319  Sum_probs=46.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHH-HHH---HHcCCCE-EEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRL-SVA---KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~-~~~---~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|...++.+...|+ .|+.++.. .++. +..   +..+... .+..+-.+ ++..+.+++..+  -
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence            4678999987 9999999988888899 46666543 2222 222   2334222 22222111 222222222222  3


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        88 g~iD~li~nAG~   99 (306)
T PRK07792         88 GGLDIVVNNAGI   99 (306)
T ss_pred             CCCCEEEECCCC
Confidence            479999999875

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.05  E-value=1.1  Score=37.25  Aligned_cols=35  Identities=23%  Similarity=0.442  Sum_probs=30.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      .+.+|+|.|.|++|..++..+...|...+..++.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45789999999999999999999998888887654

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.05  E-value=0.39  Score=40.45  Aligned_cols=94  Identities=21%  Similarity=0.225  Sum_probs=56.2

Q ss_pred             CeEEEECCCHHHHH-HHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGAGPIGLV-TMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Gag~vG~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -++.|.|.|.+|.. +..+.+.-+++.+.+++.+++  ...+.+++|.....      .++...+.+   ..-.++|+||
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~---~~~~dIDiVf   75 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM---PEFDDIDIVF   75 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC---cCCCCCCEEE
Confidence            47899999999986 555555556754555555554  34567778754221      233222211   0114699999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEec
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ++++...+.......+..+-.++...
T Consensus        76 ~AT~a~~H~e~a~~a~eaGk~VID~s  101 (302)
T PRK08300         76 DATSAGAHVRHAAKLREAGIRAIDLT  101 (302)
T ss_pred             ECCCHHHHHHHHHHHHHcCCeEEECC
Confidence            99997655555555555555555544

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=95.04  E-value=0.7  Score=37.39  Aligned_cols=103  Identities=21%  Similarity=0.265  Sum_probs=64.1

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ....++++++||=.|+|. |..+..+++..+. ..+++++.+++..+.+++    .+.+.+.....   +.    .++. 
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~----~~~~-  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NA----MELP-  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---ch----hcCC-
Confidence            335678899999998765 6677788877643 279999999888776653    22221111111   11    0110 


Q ss_pred             HhCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          176 AMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       176 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .....+|+|+-+..-      ...+..+.+.|+++|.++....
T Consensus       110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            123579999753221      2356778899999999987654

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.02  E-value=0.9  Score=39.09  Aligned_cols=88  Identities=20%  Similarity=0.186  Sum_probs=59.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|. .|++.+.+++.....    .    .+   ..++.+.+        ...|+|+-
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~---~~~l~ell--------~~aDiVil  204 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TY---KDSVKEAI--------KDADIISL  204 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hc---cCCHHHHH--------hcCCEEEE
Confidence            56789999999999999999999999 688888776543210    0    00   11222222        34799988


Q ss_pred             ccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKT-----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++.....     ....+..++++..+|..+...
T Consensus       205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~  237 (330)
T PRK12480        205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA  237 (330)
T ss_pred             eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence            8876431     234667788888888887544

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.01  E-value=0.41  Score=37.83  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=30.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|...++.+-..|.+.+..++.+
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            45789999999999999999999999988887654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=95.00  E-value=0.49  Score=40.13  Aligned_cols=87  Identities=24%  Similarity=0.214  Sum_probs=59.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|+++.|.|.|.+|+..+++++.+|+ .|++.+++...      .+....  +    .+    ++++.    ...|+|+.
T Consensus       121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~----~~----l~ell----~~aDiv~~  179 (303)
T PRK06436        121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--Y----ME----PEDIM----KKSDFVLI  179 (303)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--c----CC----HHHHH----hhCCEEEE
Confidence            58899999999999999999999999 68888765321      121110  0    12    22222    24789988


Q ss_pred             ccCCHHHH-----HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKTM-----STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +....+..     ...+..++++..++.++...
T Consensus       180 ~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~  212 (303)
T PRK06436        180 SLPLTDETRGMINSKMLSLFRKGLAIINVARAD  212 (303)
T ss_pred             CCCCCchhhcCcCHHHHhcCCCCeEEEECCCcc
Confidence            88754322     34678899999999887654

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.98  E-value=0.4  Score=41.06  Aligned_cols=98  Identities=20%  Similarity=0.272  Sum_probs=59.0

Q ss_pred             eEEEECCCHHHHHHHHHHHHCC----CCeEEEEeC--ChhHHHHHHHcCCC------------EEEecCCC------ccc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFG----APRIVIVDV--DDYRLSVAKEIGAD------------NIVKVSTN------LQD  165 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~lg~~------------~~~~~~~~------~~~  165 (290)
                      +|.|.|.|.+|...++.+...+    + .++.+..  +.+...++-+++..            ..+.++..      ..+
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999887654    5 3555522  23344444333210            00001100      001


Q ss_pred             HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          166 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      .. .+ .|   ...++|+||+|+|.......+...+..+++.+.++.+
T Consensus        80 p~-~~-~w---~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PE-AL-PW---RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hh-hc-cc---cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            11 00 12   2358999999999876677788889988899888744

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=94.96  E-value=0.64  Score=39.71  Aligned_cols=91  Identities=23%  Similarity=0.237  Sum_probs=62.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE-
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF-  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi-  185 (290)
                      .|++|.|.|.|.+|+..++-++.+|. .+.-..++..+.+...+.++..        .++.+.+        ...|+++ 
T Consensus       161 ~gK~vgilG~G~IG~~ia~rL~~Fg~-~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~~--------~~sD~ivv  223 (336)
T KOG0069|consen  161 EGKTVGILGLGRIGKAIAKRLKPFGC-VILYHSRTQLPPEEAYEYYAEF--------VDIEELL--------ANSDVIVV  223 (336)
T ss_pred             cCCEEEEecCcHHHHHHHHhhhhccc-eeeeecccCCchhhHHHhcccc--------cCHHHHH--------hhCCEEEE
Confidence            68899999999999999999999994 6777777666666666655541        2332222        2356664 


Q ss_pred             EccCCHHH----HHHHHHHhccCCEEEEeccCC
Q 022879          186 DCAGLNKT----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       186 d~~g~~~~----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +|...+.+    -...+..|++++.+|..+...
T Consensus       224 ~~pLt~~T~~liNk~~~~~mk~g~vlVN~aRG~  256 (336)
T KOG0069|consen  224 NCPLTKETRHLINKKFIEKMKDGAVLVNTARGA  256 (336)
T ss_pred             ecCCCHHHHHHhhHHHHHhcCCCeEEEeccccc
Confidence            44444322    224788899999999887543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.93  E-value=0.4  Score=39.25  Aligned_cols=80  Identities=24%  Similarity=0.275  Sum_probs=46.7

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hH-HHHH---HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YR-LSVA---KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~-~~~~---~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      +++||+|+ |.+|...+..+...|+ .++.++++. ++ .+..   +..+.. ..+..+-. ..++.+.++++.+.. .+
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            57899988 9999999998888899 466666543 22 1222   222321 22222222 223333344443322 46


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|.+.|.
T Consensus        81 id~vi~~ag~   90 (256)
T PRK12745         81 IDCLVNNAGV   90 (256)
T ss_pred             CCEEEECCcc
Confidence            9999999874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.89  E-value=0.19  Score=41.30  Aligned_cols=100  Identities=16%  Similarity=0.138  Sum_probs=56.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ++.+|||+|+ |.+|...++.+...|. .|+++.+++++......-+ .-.++..+-.+  ..+.+.+.   -+.++|++
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~l~~~---~~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--GSDKLVEA---IGDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--CHHHHHHH---hhcCCCEE
Confidence            4679999998 9999999988888898 5777767766543221111 11222211111  11122211   12369999


Q ss_pred             EEccCCHH-------------HHHHHHHHhcc--CCEEEEecc
Q 022879          185 FDCAGLNK-------------TMSTALGATCA--GGKVCLVGM  212 (290)
Q Consensus       185 id~~g~~~-------------~~~~~~~~l~~--~G~~v~~g~  212 (290)
                      |.+.|...             ....+++.+..  .++++.++.
T Consensus        90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS  132 (251)
T PLN00141         90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS  132 (251)
T ss_pred             EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence            99877421             12344444443  367888764

>PLN00203 glutamyl-tRNA reductase

Probab=94.85  E-value=0.26  Score=44.99  Aligned_cols=75  Identities=21%  Similarity=0.379  Sum_probs=51.4

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +.+|+|.|+|.+|.++++.+...|++.++++.++.++.+.+ ..++...+. +    ..+. .+.+.    -...|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~-dl~~a----l~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLD-EMLAC----AAEADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHh-hHHHH----HhcCCEEEE
Confidence            68899999999999999999999987788888998876644 445421111 0    1111 12111    146899999


Q ss_pred             ccCCHH
Q 022879          187 CAGLNK  192 (290)
Q Consensus       187 ~~g~~~  192 (290)
                      |++.+.
T Consensus       336 AT~s~~  341 (519)
T PLN00203        336 STSSET  341 (519)
T ss_pred             ccCCCC
Confidence            987643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.83  E-value=0.15  Score=38.88  Aligned_cols=81  Identities=22%  Similarity=0.222  Sum_probs=51.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|..|+++|+ -++|...++-+...|+ .|+++.++++.+..+-+.-...+...-..-.+|. .+.+... .-.++|..+
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~we-a~~~~l~-~v~pidgLV   82 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSLIIPIVGDLSAWE-ALFKLLV-PVFPIDGLV   82 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcceeeeEecccHHH-HHHHhhc-ccCchhhhh
Confidence            5778999998 7899999999999999 6999999998877554433333333222223333 3333321 123566666


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      +..|.
T Consensus        83 NNAgv   87 (245)
T KOG1207|consen   83 NNAGV   87 (245)
T ss_pred             ccchh
Confidence            66554

>PRK07069 short chain dehydrogenase; Validated

Probab=94.82  E-value=0.35  Score=39.49  Aligned_cols=79  Identities=22%  Similarity=0.304  Sum_probs=46.3

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH-HHc----CCCEE--EecC-CCcccHHHHHHHHHHHhCC
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-KEI----GADNI--VKVS-TNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~-~~l----g~~~~--~~~~-~~~~~~~~~~~~~~~~~~~  179 (290)
                      +++|+|+ |.+|...++.+...|+ .++.++++ .++.+.+ +.+    +...+  +..+ .+.+++.+.+.+..+ .-.
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD-AMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH-HcC
Confidence            3789987 9999999998888899 57777665 4443322 222    11111  2111 122334333433332 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++.+.|.
T Consensus        79 ~id~vi~~ag~   89 (251)
T PRK07069         79 GLSVLVNNAGV   89 (251)
T ss_pred             CccEEEECCCc
Confidence            69999999874

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.81  E-value=0.24  Score=35.70  Aligned_cols=92  Identities=20%  Similarity=0.173  Sum_probs=51.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCCh-hHHHHHHHcC----CCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDD-YRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~-~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|.|.|+ |.+|...++++.. -.++.+..++++. ....+...++    .... ....  .+    ..++     .+.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~--~~----~~~~-----~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVED--AD----PEEL-----SDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEE--TS----GHHH-----TTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEee--cc----hhHh-----hcCC
Confidence            6889997 9999999998876 3554444455554 2222222222    1111 1111  11    1111     4699


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +||.|++........-..+..+-+++.++..
T Consensus        69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   69 VVFLALPHGASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             EEEE-SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred             EEEecCchhHHHHHHHHHhhCCcEEEeCCHH
Confidence            9999999643333344445667788888643

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.79  E-value=0.83  Score=39.15  Aligned_cols=90  Identities=16%  Similarity=0.140  Sum_probs=58.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|+++.|.|.|.+|...++.++ .+|. .|+..++... .+....++...        .++.+.+        ...|+|.
T Consensus       144 ~gktvGIiG~G~IG~~va~~l~~~fgm-~V~~~~~~~~-~~~~~~~~~~~--------~~l~ell--------~~sDvv~  205 (323)
T PRK15409        144 HHKTLGIVGMGRIGMALAQRAHFGFNM-PILYNARRHH-KEAEERFNARY--------CDLDTLL--------QESDFVC  205 (323)
T ss_pred             CCCEEEEEcccHHHHHHHHHHHhcCCC-EEEEECCCCc-hhhHHhcCcEe--------cCHHHHH--------HhCCEEE
Confidence            5689999999999999999998 8999 5776655432 22223344321        1222222        2368887


Q ss_pred             EccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879          186 DCAGLNKT-----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       186 d~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      -+......     -...++.|+++..+|..+...
T Consensus       206 lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~  239 (323)
T PRK15409        206 IILPLTDETHHLFGAEQFAKMKSSAIFINAGRGP  239 (323)
T ss_pred             EeCCCChHHhhccCHHHHhcCCCCeEEEECCCcc
Confidence            76654321     124778899999999887654

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.77  E-value=0.28  Score=38.70  Aligned_cols=95  Identities=16%  Similarity=0.224  Sum_probs=57.1

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      ...++.+||-.|+|. |..+..+++ .|. .|++++.++...+.++..    +..  +..  ...+..    .+  .-..
T Consensus        27 ~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~--~~~d~~----~~--~~~~   93 (195)
T TIGR00477        27 KTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRT--DAYDIN----AA--ALNE   93 (195)
T ss_pred             ccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--cee--Eeccch----hc--cccC
Confidence            344567888888755 666667776 477 699999999877766432    221  110  001110    01  0124


Q ss_pred             CccEEEEcc-----CC---HHHHHHHHHHhccCCEEEEec
Q 022879          180 GIDVSFDCA-----GL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       180 ~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .+|+|+.+.     ..   ...+..+.+.|+++|.++.+.
T Consensus        94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477        94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             CCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            699997642     11   246677888999999965543

Part of a tellurite-reducing operon tehA and tehB

>PRK12827 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.4  Score=38.98  Aligned_cols=82  Identities=17%  Similarity=0.229  Sum_probs=46.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC----ChhHHHHH----HHcCCC-EEEecCCCcc-cHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV----DDYRLSVA----KEIGAD-NIVKVSTNLQ-DIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~----~~~~~~~~----~~lg~~-~~~~~~~~~~-~~~~~~~~~~~  175 (290)
                      .+.++||+|+ |.+|...+..+...|++ ++.+.+    ++++.+.+    +..+.. ..+..+-.+. +..+.++++.+
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGAD-VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999988 99999999888888995 555432    23332221    222322 2222222222 22233333322


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                       ...++|.+|.+.|.
T Consensus        84 -~~~~~d~vi~~ag~   97 (249)
T PRK12827         84 -EFGRLDILVNNAGI   97 (249)
T ss_pred             -HhCCCCEEEECCCC
Confidence             22469999999874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=94.72  E-value=0.57  Score=37.98  Aligned_cols=80  Identities=19%  Similarity=0.230  Sum_probs=46.4

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcC---C-CEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIG---A-DNIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg---~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      +++||+|+ |.+|..+++.+...|. .++.+.+++.  ..+....+.   . -..+..+-.+ ++..+.++++.. ...+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEE-EEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            47899987 9999999998888898 5777766632  222222222   1 1222222222 223333333322 2356


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        81 id~vi~~ag~   90 (245)
T PRK12824         81 VDILVNNAGI   90 (245)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.69  E-value=1.2  Score=32.50  Aligned_cols=93  Identities=20%  Similarity=0.284  Sum_probs=53.1

Q ss_pred             EEEECC-CHHHHHHHHHHHHCC--CCeEEEEeCCh--hH-HHHHHHcCCCEEEecCCCcccHHHHHHHHH----------
Q 022879          111 VLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQ----------  174 (290)
Q Consensus       111 vlI~Ga-g~vG~~ai~la~~~g--~~~vv~v~~~~--~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~----------  174 (290)
                      |.|.|+ |++|..++++.+...  + .+++.....  ++ .+.+++|.+..+...+   ++....+++..          
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence            567898 999999999999987  5 455554432  22 3345678877776533   22222232211          


Q ss_pred             -------HH-hCCCccEEEEccCCHHHHHHHHHHhccCCEE
Q 022879          175 -------KA-MGTGIDVSFDCAGLNKTMSTALGATCAGGKV  207 (290)
Q Consensus       175 -------~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  207 (290)
                             +. ....+|+++.++-+-..+.-.+..++.+=++
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~i  117 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDI  117 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEE
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeE
Confidence                   11 1246788888776666677777777655443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07201 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.4  Score=45.42  Aligned_cols=81  Identities=23%  Similarity=0.275  Sum_probs=50.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +.   .+.. ..+..+- +.+++.+.++++.+. -++
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~  448 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE-HGH  448 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh-cCC
Confidence            678999988 9999999998888899 688888887765433 22   2322 1222221 222333333433322 246


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+++++.|.
T Consensus       449 id~li~~Ag~  458 (657)
T PRK07201        449 VDYLVNNAGR  458 (657)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.68  E-value=0.33  Score=45.08  Aligned_cols=75  Identities=15%  Similarity=0.144  Sum_probs=55.7

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      ++++|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.- |..+   .+.+++.   +-...|.++-++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a---~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLA---HLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhc---CccccCEEEEEc
Confidence            789999999999999999999998 5999999999999999887654432 2222   2233332   335788888777


Q ss_pred             CCH
Q 022879          189 GLN  191 (290)
Q Consensus       189 g~~  191 (290)
                      +.+
T Consensus       490 ~~~  492 (558)
T PRK10669        490 PNG  492 (558)
T ss_pred             CCh
Confidence            654

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.67  E-value=0.21  Score=41.84  Aligned_cols=77  Identities=16%  Similarity=0.184  Sum_probs=54.2

Q ss_pred             CCCCCeEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          105 IGPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       105 ~~~~~~vlI~Gag~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      --.|++++|.|.|+ +|...+.++...|+ .|.+..+..                     .++.+.+        ..+|+
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t---------------------~~L~~~~--------~~aDI  205 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT---------------------QNLPELV--------KQADI  205 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc---------------------hhHHHHh--------ccCCE
Confidence            35788999999976 99999999999999 565553311                     1111111        35899


Q ss_pred             EEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          184 SFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       184 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|+++|.+..+.  .+.++++..++.+|..
T Consensus       206 vI~AtG~~~~v~--~~~lk~gavViDvg~n  233 (283)
T PRK14192        206 IVGAVGKPELIK--KDWIKQGAVVVDAGFH  233 (283)
T ss_pred             EEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence            999998765333  3568888888888854

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.66  E-value=0.46  Score=40.52  Aligned_cols=87  Identities=24%  Similarity=0.222  Sum_probs=58.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|+++.|.|-|.+|+..+++++.+|+ +|++.+++....    ..+.    .    ..+    +.++.    ...|+|.-
T Consensus       144 ~gktvGIiG~G~IG~~vA~~~~~fgm-~V~~~d~~~~~~----~~~~----~----~~~----l~ell----~~sDvv~l  202 (311)
T PRK08410        144 KGKKWGIIGLGTIGKRVAKIAQAFGA-KVVYYSTSGKNK----NEEY----E----RVS----LEELL----KTSDIISI  202 (311)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhcCC-EEEEECCCcccc----ccCc----e----eec----HHHHh----hcCCEEEE
Confidence            67899999999999999999999999 688887653211    1111    1    112    33332    23688877


Q ss_pred             ccCCHH-----HHHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK-----TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++...+     .-...++.|+++..+|.++...
T Consensus       203 h~Plt~~T~~li~~~~~~~Mk~~a~lIN~aRG~  235 (311)
T PRK08410        203 HAPLNEKTKNLIAYKELKLLKDGAILINVGRGG  235 (311)
T ss_pred             eCCCCchhhcccCHHHHHhCCCCeEEEECCCcc
Confidence            665422     1235788999999999998654

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.64  E-value=0.68  Score=42.61  Aligned_cols=90  Identities=19%  Similarity=0.248  Sum_probs=62.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|+++.|.|.|.+|+..++.++.+|+ .|++.++... .+....++....        +    +.++.    ...|+|+-
T Consensus       139 ~gktvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~-~~~~~~~g~~~~--------~----l~ell----~~aDiV~l  200 (526)
T PRK13581        139 YGKTLGIIGLGRIGSEVAKRAKAFGM-KVIAYDPYIS-PERAAQLGVELV--------S----LDELL----ARADFITL  200 (526)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCC-hhHHHhcCCEEE--------c----HHHHH----hhCCEEEE
Confidence            47899999999999999999999999 6888876432 222334554321        2    22222    24689988


Q ss_pred             ccCCHHH----H-HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKT----M-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++.....    + ...++.++++..++.++...
T Consensus       201 ~lP~t~~t~~li~~~~l~~mk~ga~lIN~aRG~  233 (526)
T PRK13581        201 HTPLTPETRGLIGAEELAKMKPGVRIINCARGG  233 (526)
T ss_pred             ccCCChHhhcCcCHHHHhcCCCCeEEEECCCCc
Confidence            8776422    2 34678889999999887654

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.64  E-value=0.4  Score=38.13  Aligned_cols=106  Identities=22%  Similarity=0.255  Sum_probs=67.5

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .+....++||-.|.+. |+.++.+++.+.- .++++++.++++.+.+++    .|...-+.+  ...+..+.+.++....
T Consensus        41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~--~~gda~~~l~~l~~~~  117 (205)
T PF01596_consen   41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEV--IEGDALEVLPELANDG  117 (205)
T ss_dssp             HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEE--EES-HHHHHHHHHHTT
T ss_pred             HHhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEE--EEeccHhhHHHHHhcc
Confidence            3445667999998754 8888999988742 279999999998887754    443222221  1234445555554222


Q ss_pred             -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       .+.||.||--...   ...+..+++.|+++|.++.=.
T Consensus       118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN  155 (205)
T PF01596_consen  118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN  155 (205)
T ss_dssp             TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred             CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence             2479999543332   235667889999999888654

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.64  E-value=0.7  Score=38.52  Aligned_cols=95  Identities=15%  Similarity=0.174  Sum_probs=58.4

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++++|.|+|++|.+++..+...|. .+.++++++++.+ +.+.+.... +...     ++.    +.   ....+|+
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~----~~---~~~~~Di  181 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMD----EL---PLHRVDL  181 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chh----hh---cccCccE
Confidence            457889999999999999988888898 6788888877654 334443211 1110     111    11   1235899


Q ss_pred             EEEccCCHH--HH---HHHHHHhccCCEEEEeccC
Q 022879          184 SFDCAGLNK--TM---STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       184 vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~  213 (290)
                      ||+|++...  ..   ......++++..++.+...
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~  216 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN  216 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            999998621  01   1123456677777777543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.62  E-value=0.53  Score=40.13  Aligned_cols=83  Identities=24%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC----CCEE--EecCC-CcccHHHHHHHHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG----ADNI--VKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg----~~~~--~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      -.+.+++|+|+ +++|...+.-+...|+ .|+...++.++.+.+ +.+.    ...+  +..|- +..+......++ +.
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~-~~  110 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF-KK  110 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH-Hh
Confidence            35578889998 9999999999999998 577777887554433 3322    2222  11111 112222222222 23


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      ...+.|+.|+++|.
T Consensus       111 ~~~~ldvLInNAGV  124 (314)
T KOG1208|consen  111 KEGPLDVLINNAGV  124 (314)
T ss_pred             cCCCccEEEeCccc
Confidence            46789999998875

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.62  E-value=0.21  Score=47.31  Aligned_cols=77  Identities=23%  Similarity=0.324  Sum_probs=50.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEecCCCcc
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQ  164 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~  164 (290)
                      ..+.+|+|.|+|+.|++++..+...|. .|++++..+.                     ..+.++.+|.+...+.. ...
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~-v~~  402 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCE-VGK  402 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCE-eCC
Confidence            357899999999999999999999999 4777766532                     34455667754332210 001


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          165 DIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +.  .++++    ...+|.||.++|.
T Consensus       403 ~i--~~~~~----~~~~DavilAtGa  422 (654)
T PRK12769        403 DI--SLESL----LEDYDAVFVGVGT  422 (654)
T ss_pred             cC--CHHHH----HhcCCEEEEeCCC
Confidence            11  11222    1359999999886

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.62  E-value=2.1  Score=35.11  Aligned_cols=96  Identities=18%  Similarity=0.282  Sum_probs=62.0

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ...++.+||-.|+|. |..+..+++ .|. .+++++.+++..+.++.... ...+..+.  ++       + ......||
T Consensus        39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~--~~-------~-~~~~~~fD  105 (251)
T PRK10258         39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI--ES-------L-PLATATFD  105 (251)
T ss_pred             CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc--cc-------C-cCCCCcEE
Confidence            334678899888865 655555554 576 79999999999888876432 22222111  11       1 01234699


Q ss_pred             EEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          183 VSFDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       183 ~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +|+....-      ...+..+.+.|+++|.++....
T Consensus       106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        106 LAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             EEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            99875431      2467788899999999987653

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=94.60  E-value=0.077  Score=44.77  Aligned_cols=29  Identities=31%  Similarity=0.482  Sum_probs=25.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRI  135 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~v  135 (290)
                      +...|||.|+|+.|.=++|++.+.|+.++
T Consensus        65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~l   93 (427)
T KOG2017|consen   65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRL   93 (427)
T ss_pred             CCccEEEEccCCCCCHHHHHHHHcCCCee
Confidence            45789999999999999999999999754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.53  E-value=0.54  Score=38.57  Aligned_cols=82  Identities=12%  Similarity=0.109  Sum_probs=46.5

Q ss_pred             CCCeEEEECCC---HHHHHHHHHHHHCCCCeEEEEeCC------------hhHHHHHH---HcCCC-EEEecCCC-cccH
Q 022879          107 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVD------------DYRLSVAK---EIGAD-NIVKVSTN-LQDI  166 (290)
Q Consensus       107 ~~~~vlI~Gag---~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~~~~---~lg~~-~~~~~~~~-~~~~  166 (290)
                      .++++||+|++   ++|...+..+...|+ .++.++++            ++...+.+   ..+.. ..+..+-. ..+.
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            45789999873   799998888888899 46666554            22222222   23322 22222222 2233


Q ss_pred             HHHHHHHHHHhCCCccEEEEccCC
Q 022879          167 AEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      ...++++.+.. .++|++|++.|.
T Consensus        83 ~~~~~~~~~~~-g~id~vi~~ag~  105 (256)
T PRK12748         83 NRVFYAVSERL-GDPSILINNAAY  105 (256)
T ss_pred             HHHHHHHHHhC-CCCCEEEECCCc
Confidence            33344443322 469999999874

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.49  E-value=0.61  Score=39.94  Aligned_cols=90  Identities=21%  Similarity=0.190  Sum_probs=56.3

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      |+++.|.|.|.+|+..++.++.+|+ .|++.+....+. .....+...       ..++.+.++        ..|++.-.
T Consensus       142 gkTvGIiG~G~IG~~va~~l~afgm-~v~~~d~~~~~~-~~~~~~~~~-------~~~Ld~lL~--------~sDiv~lh  204 (324)
T COG0111         142 GKTVGIIGLGRIGRAVAKRLKAFGM-KVIGYDPYSPRE-RAGVDGVVG-------VDSLDELLA--------EADILTLH  204 (324)
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEECCCCchh-hhcccccee-------cccHHHHHh--------hCCEEEEc
Confidence            7899999999999999999999999 688887722221 111111111       122322222        35777665


Q ss_pred             cCCHH-----HHHHHHHHhccCCEEEEeccCC
Q 022879          188 AGLNK-----TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       188 ~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +...+     .-...+..|+++..++.++...
T Consensus       205 ~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~  236 (324)
T COG0111         205 LPLTPETRGLINAEELAKMKPGAILINAARGG  236 (324)
T ss_pred             CCCCcchhcccCHHHHhhCCCCeEEEECCCcc
Confidence            55422     1224677888888887776543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=94.45  E-value=0.33  Score=36.57  Aligned_cols=96  Identities=19%  Similarity=0.266  Sum_probs=62.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHH-----HhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-----AMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  181 (290)
                      ..+|+|+|+ |.+|.+.++..++.++ -|.-++-++....     ....++   ..+.+|.++-+...+     ..+.++
T Consensus         3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~A-----d~sI~V---~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQA-----DSSILV---DGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccc-----cceEEe---cCCcchhHHHHHHHHHHHHhhccccc
Confidence            358999988 9999999999999999 5777766654321     122222   334556554443332     357789


Q ss_pred             cEEEEccCCH--------H-------HH-----------HHHHHHhccCCEEEEecc
Q 022879          182 DVSFDCAGLN--------K-------TM-----------STALGATCAGGKVCLVGM  212 (290)
Q Consensus       182 d~vid~~g~~--------~-------~~-----------~~~~~~l~~~G~~v~~g~  212 (290)
                      |.||.-.|+=        +       .+           ..+...|+++|-+.+.|.
T Consensus        74 Dav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGA  130 (236)
T KOG4022|consen   74 DAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGA  130 (236)
T ss_pred             ceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Confidence            9999877641        1       11           114456888888877764

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.45  E-value=0.17  Score=40.11  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=53.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|.+++|.|.|.+|..+++.+...|+ .|++.+.++++.+.+. .+++.. ++  .  ++       +   ....+|+++
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~--~--~~-------l---~~~~~Dv~v   90 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VA--P--EE-------I---YSVDADVFA   90 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ec--c--hh-------h---ccccCCEEE
Confidence            67899999999999999999999999 6788888888766554 456432 22  1  11       1   123589999


Q ss_pred             EccCCHHHHHHHHHHhc
Q 022879          186 DCAGLNKTMSTALGATC  202 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~  202 (290)
                      -|......-...++.++
T Consensus        91 p~A~~~~I~~~~~~~l~  107 (200)
T cd01075          91 PCALGGVINDDTIPQLK  107 (200)
T ss_pred             ecccccccCHHHHHHcC
Confidence            76554333334455554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=94.45  E-value=0.52  Score=39.00  Aligned_cols=81  Identities=19%  Similarity=0.140  Sum_probs=45.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHH-HHHHcC----CC-EEEecCCCcc-cHHHHHHHHHH---H
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLS-VAKEIG----AD-NIVKVSTNLQ-DIAEEVEKIQK---A  176 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~-~~~~lg----~~-~~~~~~~~~~-~~~~~~~~~~~---~  176 (290)
                      .+++|+|+ +++|...++.+...|++ |+.+. +++++.+ ..+++.    .. ..+..+-.+. ...+.++++.+   .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYR-VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            46899988 99999999998889995 55543 3333333 333332    11 1222222222 22122222211   1


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      .-+++|++|++.|.
T Consensus        81 ~~g~iD~lv~nAG~   94 (267)
T TIGR02685        81 AFGRCDVLVNNASA   94 (267)
T ss_pred             ccCCceEEEECCcc
Confidence            23469999999874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.41  E-value=0.31  Score=39.45  Aligned_cols=70  Identities=23%  Similarity=0.335  Sum_probs=47.0

Q ss_pred             EEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          111 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       111 vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      |+|.|+ |.+|...++.+...+.+ |.+..++..  ..+.++..|+..+ ..+..  +. +.+.+..    .++|.||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~-V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~--~~-~~l~~al----~g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFS-VRALVRDPSSDRAQQLQALGAEVV-EADYD--DP-ESLVAAL----KGVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGC-EEEEESSSHHHHHHHHHHTTTEEE-ES-TT---H-HHHHHHH----TTCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCC-cEEEEeccchhhhhhhhcccceEe-ecccC--CH-HHHHHHH----cCCceEEee
Confidence            789998 99999999999888885 666656653  3455677887644 33222  22 2333322    479999999


Q ss_pred             cC
Q 022879          188 AG  189 (290)
Q Consensus       188 ~g  189 (290)
                      ++
T Consensus        72 ~~   73 (233)
T PF05368_consen   72 TP   73 (233)
T ss_dssp             SS
T ss_pred             cC
Confidence            88

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.41  E-value=0.46  Score=38.03  Aligned_cols=76  Identities=21%  Similarity=0.241  Sum_probs=46.4

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .++||+|+ |.+|...+..+... . .|++++++.++.+.+. .+....++..+-.  + .+.+++..... .++|.+|+
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-~~id~vi~   77 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLT--D-PEAIAAAVEQL-GRLDVLVH   77 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCC--C-HHHHHHHHHhc-CCCCEEEE
Confidence            57999987 99999888876666 6 5888888876655443 2322223322221  2 12333332211 26999999


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.|.
T Consensus        78 ~ag~   81 (227)
T PRK08219         78 NAGV   81 (227)
T ss_pred             CCCc
Confidence            9875

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.41  E-value=0.83  Score=39.95  Aligned_cols=35  Identities=31%  Similarity=0.539  Sum_probs=30.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ...+|+|.|+|++|..++..+...|...+..++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45689999999999999999999999888888665

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.39  E-value=0.4  Score=37.30  Aligned_cols=32  Identities=25%  Similarity=0.364  Sum_probs=27.7

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ++||+|+ |++|+..++.+...|...++.+.++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~   34 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS   34 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence            6899987 9999999999998888889998888

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.39  E-value=1.3  Score=31.58  Aligned_cols=87  Identities=25%  Similarity=0.263  Sum_probs=56.6

Q ss_pred             eEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCChhHHHH-HHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      ++.|.|.|.+|.....-.+..  +.+.+.+.+.++++.+. .+.++.. .+  .    ++.+.+.      ...+|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~----~~~~ll~------~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--T----DLEELLA------DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--S----SHHHHHH------HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--h----HHHHHHH------hhcCCEEEE
Confidence            678999999998887655555  45334455777766664 4667765 32  1    3333322      236999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ++....+...+..++..+- -+.+
T Consensus        69 ~tp~~~h~~~~~~~l~~g~-~v~~   91 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGK-HVLV   91 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTS-EEEE
T ss_pred             ecCCcchHHHHHHHHHcCC-EEEE
Confidence            9998777777777776554 4444

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.34  E-value=0.95  Score=35.91  Aligned_cols=99  Identities=15%  Similarity=0.119  Sum_probs=62.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ++.+||-.|+|. |..+..+++......+++++.+++..+.+++    .+...+....   .+..+.+...  .....+|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D  113 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD  113 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence            667888888866 7777788877644479999999998887754    2322221111   2221122111  1245689


Q ss_pred             EEEEccC--------------CHHHHHHHHHHhccCCEEEEec
Q 022879          183 VSFDCAG--------------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       183 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .|+-...              .+..+..+.+.|+++|.++...
T Consensus       114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~  156 (202)
T PRK00121        114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT  156 (202)
T ss_pred             eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence            8875432              1346788899999999998763

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.33  E-value=0.27  Score=42.24  Aligned_cols=93  Identities=19%  Similarity=0.189  Sum_probs=60.1

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      -.+.+|+|+|+ |.+|..+++.+. ..|.+.++.+.+++++.+.+. +++...+       .+    +.+.    -...|
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~----l~~~----l~~aD  217 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LS----LEEA----LPEAD  217 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------Hh----HHHH----HccCC
Confidence            36789999998 999999888886 457767888888877766543 3431111       11    2222    13589


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          183 VSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|+.+++.+..+..-...+++.-.++.++.+
T Consensus       218 iVv~~ts~~~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        218 IVVWVASMPKGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             EEEECCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence            9999998754321222455666777777754

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.33  E-value=0.51  Score=44.35  Aligned_cols=93  Identities=15%  Similarity=0.176  Sum_probs=64.5

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      .++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|... +.-|..+.+   .+++   .+-...|.++-+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v-~~GDat~~~---~L~~---agi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKV-FYGDATRMD---LLES---AGAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeE-EEEeCCCHH---HHHh---cCCCcCCEEEEE
Confidence            3689999999999999999999999 5899999999999999887643 322222222   2332   244578999999


Q ss_pred             cCCHHHHHH---HHHHhccCCEEE
Q 022879          188 AGLNKTMST---ALGATCAGGKVC  208 (290)
Q Consensus       188 ~g~~~~~~~---~~~~l~~~G~~v  208 (290)
                      ++.++.-..   ..+.+.|+-+++
T Consensus       472 ~~d~~~n~~i~~~ar~~~p~~~ii  495 (621)
T PRK03562        472 IDDPQTSLQLVELVKEHFPHLQII  495 (621)
T ss_pred             eCCHHHHHHHHHHHHHhCCCCeEE
Confidence            987543222   333444554444

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.33  E-value=0.41  Score=32.16  Aligned_cols=84  Identities=18%  Similarity=0.319  Sum_probs=52.9

Q ss_pred             ECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE---EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       114 ~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      .|+| .|..+..+++. +...+++++.+++..+.+++.....   ....+.  .++        ....+.||+|+....-
T Consensus         3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~--~~l--------~~~~~sfD~v~~~~~~   70 (95)
T PF08241_consen    3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDA--EDL--------PFPDNSFDVVFSNSVL   70 (95)
T ss_dssp             ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBT--TSS--------SS-TT-EEEEEEESHG
T ss_pred             ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehH--HhC--------ccccccccccccccce
Confidence            3555 48888888888 4448999999999888887754222   222111  111        0124579999774322


Q ss_pred             ------HHHHHHHHHHhccCCEEEE
Q 022879          191 ------NKTMSTALGATCAGGKVCL  209 (290)
Q Consensus       191 ------~~~~~~~~~~l~~~G~~v~  209 (290)
                            ...+..+.+.|+++|+++.
T Consensus        71 ~~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   71 HHLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             GGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eeccCHHHHHHHHHHHcCcCeEEeC
Confidence                  2467889999999999873

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.32  E-value=1.3  Score=39.52  Aligned_cols=102  Identities=16%  Similarity=0.151  Sum_probs=61.7

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE-EEecCCCcccHHHHHHHHHHH
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ...+++|++||=.|+|+ |..+..+++.++...+++++.++++.+.++    .+|... +........+.    ..+  .
T Consensus       233 ~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~----~~~--~  305 (426)
T TIGR00563       233 WLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGP----SQW--A  305 (426)
T ss_pred             HhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccc----ccc--c
Confidence            34678899999887654 445556666655337999999999877663    456541 21111111110    000  0


Q ss_pred             hCCCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCEEEEe
Q 022879          177 MGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ....||.||-   |+|.                         ...+..+++.|+++|+++..
T Consensus       306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys  367 (426)
T TIGR00563       306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA  367 (426)
T ss_pred             cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            1346999874   4442                         13566788899999999865

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.29  E-value=0.56  Score=37.94  Aligned_cols=74  Identities=22%  Similarity=0.338  Sum_probs=53.8

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +++|.|+|.+|...++.+...|. .|+.++.++++.+. +. +++.. ++.-+..++   +.+++   .+-..+|+++-+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~~---~~L~~---agi~~aD~vva~   73 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATDE---DVLEE---AGIDDADAVVAA   73 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCCH---HHHHh---cCCCcCCEEEEe
Confidence            57889999999999999999999 58999999998776 33 35543 333233222   33443   355789999999


Q ss_pred             cCCH
Q 022879          188 AGLN  191 (290)
Q Consensus       188 ~g~~  191 (290)
                      +|..
T Consensus        74 t~~d   77 (225)
T COG0569          74 TGND   77 (225)
T ss_pred             eCCC
Confidence            9973

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=94.28  E-value=0.35  Score=41.06  Aligned_cols=78  Identities=21%  Similarity=0.147  Sum_probs=49.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH---HHHHHHcC-CC-EEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR---LSVAKEIG-AD-NIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~---~~~~~~lg-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .+.+|+|+|| |-+|...+..+-..|+ .|.++.++++.   .+.+++|. +. ....+..+-.+..+.-+.+     .|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai-----~g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI-----DG   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH-----hC
Confidence            5678999998 9999999999999999 57777677655   34566665 11 1111112112222222222     46


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      .|.||.++..
T Consensus        79 cdgVfH~Asp   88 (327)
T KOG1502|consen   79 CDGVFHTASP   88 (327)
T ss_pred             CCEEEEeCcc
Confidence            9999997754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.26  E-value=0.36  Score=41.23  Aligned_cols=37  Identities=19%  Similarity=-0.000  Sum_probs=29.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      .+.+|||+|+ |.+|...++.+...|. .|+++.++.++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   41 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD   41 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence            4679999987 9999999998888899 46655555443

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.25  E-value=0.22  Score=41.12  Aligned_cols=74  Identities=18%  Similarity=0.095  Sum_probs=49.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      +|||.|+++-|...+..+...|. .|++...++...+.+...|...++.- .  -+-. .+.++.  ...++|+|+|++.
T Consensus         2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g-~--l~~~-~l~~~l--~~~~i~~VIDAtH   74 (256)
T TIGR00715         2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTG-A--LDPQ-ELREFL--KRHSIDILVDATH   74 (256)
T ss_pred             eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEEC-C--CCHH-HHHHHH--HhcCCCEEEEcCC
Confidence            68999885559988887777898 57777788777776666665555431 1  1212 243332  3467999999988


Q ss_pred             C
Q 022879          190 L  190 (290)
Q Consensus       190 ~  190 (290)
                      .
T Consensus        75 P   75 (256)
T TIGR00715        75 P   75 (256)
T ss_pred             H
Confidence            5

This enzyme was found to be a monomer by gel filtration.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.18  E-value=1.2  Score=30.38  Aligned_cols=85  Identities=20%  Similarity=0.247  Sum_probs=52.8

Q ss_pred             eEEEECCCHHHHHHHHHHHHCC---CCeEE-EEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          110 NVLIMGAGPIGLVTMLAARAFG---APRIV-IVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g---~~~vv-~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +|.|.|+|.+|.+.++-+...|   . .+. +.++++++.+.+ ++++.....      .+..+.++        ..|+|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~--------~advv   65 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ--------EADVV   65 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH--------HTSEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc--------cCCEE
Confidence            4677899999999999888888   6 455 548888887655 566644321      12222322        36999


Q ss_pred             EEccCCHHHHHHHHHH---hccCCEEEEe
Q 022879          185 FDCAGLNKTMSTALGA---TCAGGKVCLV  210 (290)
Q Consensus       185 id~~g~~~~~~~~~~~---l~~~G~~v~~  210 (290)
                      |-|+..+ .+...++.   ..++..++.+
T Consensus        66 ilav~p~-~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   66 ILAVKPQ-QLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             EE-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence            9999864 44444433   4455555554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.17  E-value=1.2  Score=35.60  Aligned_cols=99  Identities=15%  Similarity=0.204  Sum_probs=57.0

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ++++++||=.|+|+ |..+..+++..+. ..|++++.++..     .+..-.++.-+-.+......+.+.  .....+|+
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~~~~~~~~~i~~~--~~~~~~D~  120 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDFRDELVLKALLER--VGDSKVQV  120 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCCCChHHHHHHHHH--hCCCCCCE
Confidence            57888888888755 5555566666553 279999887621     121112232221111212222221  13567999


Q ss_pred             EEEcc-----CC------------HHHHHHHHHHhccCCEEEEec
Q 022879          184 SFDCA-----GL------------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       184 vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |+...     |.            ...+..+.+.|+++|.++..-
T Consensus       121 V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~~  165 (209)
T PRK11188        121 VMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKV  165 (209)
T ss_pred             EecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence            98644     21            124677888999999998753

>PRK08309 short chain dehydrogenase; Provisional

Probab=94.16  E-value=2  Score=33.27  Aligned_cols=93  Identities=8%  Similarity=0.015  Sum_probs=50.3

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC---CEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA---DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +++|.|++++|...++.+...|+ .|.++++++++.+.+.. ++.   ...+..+- +.+++...++...+ ..+++|++
T Consensus         2 ~vlVtGGtG~gg~la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~-~~g~id~l   79 (177)
T PRK08309          2 HALVIGGTGMLKRVSLWLCEKGF-HVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIE-KNGPFDLA   79 (177)
T ss_pred             EEEEECcCHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcCCCeEE
Confidence            57889874555556665566799 56666777766554332 321   11221122 22344444544433 23578999


Q ss_pred             EEccCCHHHHHHHHHHhccCC
Q 022879          185 FDCAGLNKTMSTALGATCAGG  205 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~G  205 (290)
                      |+.+-. ..-.......+..|
T Consensus        80 v~~vh~-~~~~~~~~~~~~~g   99 (177)
T PRK08309         80 VAWIHS-SAKDALSVVCRELD   99 (177)
T ss_pred             EEeccc-cchhhHHHHHHHHc
Confidence            998775 33344444444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	290
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		5e-75
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-74
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		1e-73
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		5e-72
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		3e-55
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		5e-34
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		5e-34
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		7e-33
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		2e-30
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		8e-30
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-29
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		3e-22
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-21
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		2e-21
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		6e-21
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		6e-21
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		7e-21
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		4e-19
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-19
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-19
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		2e-18
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		2e-18
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-18
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		3e-18
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		3e-18
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		4e-18
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		5e-18
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		6e-18
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		1e-17
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		1e-17
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		1e-17
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-17
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-17
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		6e-17
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		6e-17
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		6e-17
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		7e-17
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		7e-17
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-16
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-16
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		2e-16
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-16
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-16
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-16
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		3e-16
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		1e-15
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-15
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		4e-15
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-15
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		7e-15
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		7e-15
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		9e-15
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-14
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		2e-14
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		3e-14
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		6e-14
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		9e-14
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		1e-13
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		1e-13
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-13
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		2e-13
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-13
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-13
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		3e-13
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		4e-13
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		5e-13
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		9e-13
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-12
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		6e-12
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		1e-11
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		3e-11
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		3e-11
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		7e-10
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		9e-10
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		2e-08
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		2e-07
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-07
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		4e-06
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-05
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		4e-05
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		6e-05
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		6e-05
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		2e-04
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-04
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		6e-04

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  277 bits (708), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 147/290 (50%), Positives = 192/290 (66%), Gaps = 4/290 (1%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP 
Sbjct: 62  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 121
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+LA   VH AD C KLPDNVSLEEGA+ EPLSVGVHACRRA +   T VL++GAGPIG
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIG 181
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LV++LAA+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G  
Sbjct: 182 LVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDL 240
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
            +V+ DC+G  K ++  +  T  GG + LVGMG   +TVPL  A  RE+D+  VFRY N 
Sbjct: 241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCND 300
Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 289
           +P+ LE++ SG+ +VK LVTH F   Q    +AFE +  +    IKVM +
Sbjct: 301 YPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 199/290 (68%), Gaps = 7/290 (2%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP 
Sbjct: 64  MVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPD 123
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIG
Sbjct: 124 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 183
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           LV +LAA+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+
Sbjct: 184 LVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGS 240
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY N
Sbjct: 241 KPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCN 300
Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM  
Sbjct: 301 TWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMIK 347

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 194/290 (66%), Gaps = 7/290 (2%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
           +VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE     +G 
Sbjct: 185 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGC 241
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
             +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY N
Sbjct: 242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCN 301
Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           TWP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 302 TWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  267 bits (683), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 142/280 (50%), Positives = 187/280 (66%), Gaps = 6/280 (2%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  
Sbjct: 66  VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDD 125
Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
           G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG 
Sbjct: 126 GNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGX 185
Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTG 180
           VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE     +G  
Sbjct: 186 VTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCK 242
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
            +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NT
Sbjct: 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNT 302
Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
           WP+ +  L S  ++VKPLVTHRF    ++  EAFET  +G
Sbjct: 303 WPVAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 178/291 (61%), Gaps = 8/291 (2%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+GHE AG +  V   VK++  GDRVA+EP + C  C+ C  GRYN C  + F +TPPV 
Sbjct: 75  VLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVP 134
Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
           G L   V HPA  C K+  N+S E GAM EPLSV +   +RA +     VLI GAGPIGL
Sbjct: 135 GLLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGL 193
Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
           +TML A+A GA  +VI D+D+ RL  AKEI  + +      L    E  +KI ++ G GI
Sbjct: 194 ITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERL-SAEESAKKIVESFG-GI 251
Query: 182 D--VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
           +  V+ +C G+  +++ A+ A   GGKV ++G+G +E+ +P   A+VREVD+   +RY N
Sbjct: 252 EPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCN 311
Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFN 289
           TWP  + L+ +G +D+  LVTHRF    ++  +AFET++   T AIKV   
Sbjct: 312 TWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQ 360

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 156/294 (53%), Gaps = 13/294 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            + GHE AG + ++G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F     
Sbjct: 62  QIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DT 120
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A   V PA   +K P ++  E   + EPL   V       I  ++ VLI GAGP+G
Sbjct: 121 DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLG 179
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+ +  A+A GA  +++ +  D+R  +AK++GAD +  ++   +D+ +EV  I    G G
Sbjct: 180 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNG 235
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
           +DV  + +G  K +   L A    G+V L+G+   ++T+      + + + + G+     
Sbjct: 236 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHL 295
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 290
             TW     LL+SGK+++ P++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 296 WETWYTVSRLLQSGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 156/294 (53%), Gaps = 13/294 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            + GHE AG + ++G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F     
Sbjct: 63  QIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DT 121
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A   V PA   +K P ++  E   + EPL   V       I  ++ VLI GAGP+G
Sbjct: 122 DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLG 180
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+ +  A+A GA  +++ +  D+R  +AK++GAD +  ++   +D+ +EV  I    G G
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNG 236
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
           +DV  + +G  K +   L A    G+V L+G+   ++T+      + + + + G+     
Sbjct: 237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHL 296
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 290
             TW     LL+SGK+++ P++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  137 bits (345), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 154/292 (52%), Gaps = 12/292 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            ++GHE AG + +VG  V+ L  GD +++E  I C +C  CK  RY++C   K F    +
Sbjct: 63  QIMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DM 121
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A+  + PA   +K P ++  E  A+ EPL   V       I   +  LI GAGP+G
Sbjct: 122 DGVFAHYAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLG 180
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+ +  A+A GA  +++ +  ++R  +AK++GAD +  V+   +D  + V  I    G G
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAG 236
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
           ++V  + +G  K +   L A   GG+V L+G+   E+T+      + + ++V G+     
Sbjct: 237 VEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHL 296
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 288
             TW     L++SGK+++ P++TH++ GF +   EEAFE    G T   V F
Sbjct: 297 WETWYTVSSLIQSGKLNLDPIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 13/292 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V GHE +GV+E VG  V+    GD V+LE  I C  C  C+ G Y++C   +       
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVD-R 117
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A  VV PA+  +  P ++  E  A+ EP    VH     +     +VLI GAGPIG
Sbjct: 118 DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIG 177
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+  +  RA GA  I++ D + YRL+ A+   AD +V     L++  + +E +++  G+G
Sbjct: 178 LMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSG 231
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
           ++V  + +G    +   L A   GG+  ++G+    +   L    V R +   G+   R 
Sbjct: 232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRL 291
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
             TW     L+ SG++D+ PL+THR   S+    EAF   A  G A+KV+ +
Sbjct: 292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSR--YREAFGLLA-SGQAVKVILD 340

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  127 bits (318), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 28/303 (9%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +   
Sbjct: 55  ITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR- 113
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A  +V      F LP ++ +E+GA  EP++VG+HA   A      NV+I+GAG IG
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIG 173
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST----NLQDIAEEVEKIQKA 176
           L+ +  A A GA  +  +D+   +L++AK  GA      S      +Q +  E+   Q  
Sbjct: 174 LLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLI 233
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDV 231
           + T        AG+ +T+  A+       ++ LVG  H ++   LT A       +E+ V
Sbjct: 234 LET--------AGVPQTVELAVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTV 283
Query: 232 VGVF-RYKNTWP-----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 285
           +G +  Y + WP         LL   K+ ++PL+ HR  F  +   +A    AR     K
Sbjct: 284 IGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGK 341
Query: 286 VMF 288
           V+ 
Sbjct: 342 VLL 344

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 9/271 (3%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC  ++      +
Sbjct: 77  VTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG---I 133
Query: 61  H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGP 118
           H  G  A  V+ P    F++P  +    GA CEPL+  +H    + I   + V I+G G 
Sbjct: 134 HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGV 193
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           IGL+T+  AR  GA  +++      +  +A+E+GA   V  S    D+ E +      + 
Sbjct: 194 IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVGLVP 251
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFR 236
            G+DV  +CAG+ +T+  +     AGG V ++G+      V + P  +  RE+ V+G F 
Sbjct: 252 GGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFI 311
Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 267
                    +L+ +G I++   ++ R    +
Sbjct: 312 NPFVHRRAADLVATGAIEIDRXISRRISLDE 342

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           VIGHE  GVI+ VG  V++   G+RVA++P +SC  C  C  G+ N+C  +       VH
Sbjct: 76  VIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VH 132
Query: 62  --GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPI 119
             G  +   V PA   +K+P+ V+ +   M EP ++  +            VL+ GAGPI
Sbjct: 133 ADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPI 192
Query: 120 GLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEEVEKIQKA 176
           GL  +   +  +    +++ D  D RL  AKE GAD  +  S     +  AE+       
Sbjct: 193 GLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK------- 245
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 236
            G    +  D A     +  A+       ++ L+G       V       +E+ +     
Sbjct: 246 -GIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRL 304
Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 267
             N +P+ ++ L  G I  + L+TH F F  
Sbjct: 305 NANKFPVVIDWLSKGLIKPEKLITHTFDFQH 335

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 28/299 (9%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
           ++ GHE  G++E+VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A  
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGY 114
Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
            V G  A      AD   K+PDN+S EE A   C  ++    A +     P   V I G 
Sbjct: 115 SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGI 173
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G V +  A+A G   +V VD+ D +L +AKE+GAD +V        + E+  K  K 
Sbjct: 174 GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKE 226
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
              G+  +   A       +A  +   GG   LVG+   EM +P+    +  + ++G + 
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIV 286
Query: 236 RYKNTWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
             +      L+    GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 287 GTRKDLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 28/299 (9%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
           ++ GHE  G++E+VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A  
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGY 114
Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
            V G  A      AD   K+PDN+S EE A   C  ++    A +     P   V I G 
Sbjct: 115 SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGI 173
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G  G V +  A+A G   +V VD+ D +L +AKE+GAD +V        + E+  K  K 
Sbjct: 174 GGFGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKE 226
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
              G+  +   A       +A  +   GG   LVG+   EM +P+    +  + ++G + 
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIV 286
Query: 236 RYKNTWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
             +      L+    GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 287 GTRKDLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 39/312 (12%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+GHECAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +
Sbjct: 63  VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 61  HGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPL 93
              L                            VV  A+L  ++ D  +LE   +  C   
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFS 181
Query: 94  SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
           S    A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +GA
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 154 DNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVG 211
            + +    N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG
Sbjct: 242 TDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 212 MGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
               EMT+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F  +
Sbjct: 298 AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--E 355
Query: 269 EVEEAFETSARG 280
            + +A +    G
Sbjct: 356 SINDAIDLMKEG 367

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 39/312 (12%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+GHECAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +
Sbjct: 63  VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 61  HGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPL 93
              L                            VV  A+L  ++ D  +LE   +  C   
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFS 181
Query: 94  SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
           S    A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +GA
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 154 DNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVG 211
            + +    N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG
Sbjct: 242 TDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 212 MGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
               EMT+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F  +
Sbjct: 298 AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--E 355
Query: 269 EVEEAFETSARG 280
            + +A +    G
Sbjct: 356 SINDAIDLMKEG 367

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 14/263 (5%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G + +GV++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       H
Sbjct: 60  VLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRH 118
Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEP--LSVGVHACRRANIGPETNVLIMGAGP- 118
           G+ A  VV P       P N+S EE A      L+       +  + P  +VL+M AG  
Sbjct: 119 GTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSG 178
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           + +  +  A+ FGA R++     + +L  AK +GAD  V  +    D  +EV ++    G
Sbjct: 179 VSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--G 233
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFR 236
            G D   D  G        + AT  GG++ + G    +E T+P      R++ ++G    
Sbjct: 234 KGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA 292
Query: 237 YKNTWPLCLELLRSGKIDVKPLV 259
            K+     L  +  GK+  KP+V
Sbjct: 293 SKSRLFPILRFVEEGKL--KPVV 313

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 37/312 (11%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE AG++E +G  V  + PGD+V       C +C  C     NLC ++    +P  
Sbjct: 66  VIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPAS 125
Query: 59  -----------------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCE-PLSV 95
                            PV+     S  +Q    +D+   K+ D+ +LE   +     S 
Sbjct: 126 DQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFST 185
Query: 96  GVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154
           G  A    A + P +   + G G +GL  ++  +A GA RI+ +D++  +   AK +GA 
Sbjct: 186 GYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGAT 245
Query: 155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL---VG 211
           + +      + I E + ++ K    G+D + DCAG ++TM  AL  T AG   C    V 
Sbjct: 246 DCLNPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVA 302
Query: 212 MGHHEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
            G   +TV P      R ++    G ++  ++ P  +   ++ K ++  LVTH   F + 
Sbjct: 303 AGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK- 361
Query: 269 EVEEAFETSARG 280
            + EAF+   +G
Sbjct: 362 -ISEAFDLMNQG 372

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 49/325 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    NLC  +K  + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRG 120
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 121 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFS 176
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 177 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 236
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM  AL + C  A G   +V
Sbjct: 237 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIV 291
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 292 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 351
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 352 --EKINEGFDL-LRSGKSIRTILTF 373

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 49/325 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    NLC  +K  + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRG 120
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 121 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFS 176
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 177 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 236
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM  AL + C  A G   +V
Sbjct: 237 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIV 291
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 292 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 351
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 352 --EKINEGFDL-LRSGKSIRTILTF 373

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  R + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPV 60
           V+GHE  G+++++G++V +L  GDRV++      C  C++C  G    C E+K  A   V
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSV 115
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPI 119
            G +A + +  AD   K+PD +   E +      V  + A + + + P    +I GAG +
Sbjct: 116 DGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGL 175
Query: 120 G-LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKA 176
           G L    A   FGA +++ VD++  +L++AK+IGAD I+    N  D+   +E++KI   
Sbjct: 176 GNLAIQYAKNVFGA-KVIAVDINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG- 229
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
            G G+  +  CA        A+ +    GK+  V + + EMT+ +       V+V G + 
Sbjct: 230 -GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLV 288
Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHR 262
             +       +    GK  VKP+V  R
Sbjct: 289 GTRLDLAEAFQFGAEGK--VKPIVATR 313

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NY 122
Query: 61  HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GP 118
            G+ A  V+ P     +KL    ++E   +         A R+A++ P   ++++GA G 
Sbjct: 123 DGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G + +  A+A     I+ VDV +  L  AK  GAD ++  S+  QD   E+ +I +  G
Sbjct: 183 LGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--G 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRY 237
            G D   D     KT+S         GK  +VG+   ++        + EV  +G +   
Sbjct: 239 KGADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGN 298
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
           ++ +   + L  +GK  VKP+VT       +E  EA + 
Sbjct: 299 QSDFLGIMSLAEAGK--VKPMVTKTMKL--EEANEAIDN 333

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPV 60
           V+GHE  G+++++G++V +L  GDRV++      C  C++C  G    C E+K  A   V
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSV 115
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPI 119
            G +A + +  AD   K+PD +   E +      V  + A + + + P    +I GAG +
Sbjct: 116 DGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGL 175
Query: 120 G-LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKA 176
           G L    A   FGA +++ VD++  +L++AK+IGAD    V+ N  D+   +E++KI   
Sbjct: 176 GNLAIQYAKNVFGA-KVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG- 229
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
            G G+  +  CA        A+ +    GK+  V + + EMT+ +       V+V G + 
Sbjct: 230 -GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLV 288
Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHR 262
             +       +    GK  VKP+V  R
Sbjct: 289 GTRLDLAEAFQFGAEGK--VKPIVATR 313

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P  +         + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   + 
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIT 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G  GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G  GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   + 
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIS 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           G+      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +    + P  
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D +S+ +     PL          S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
              V    N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
            +      + + P         +  + G F+ K++ P  +    + K  + PL+TH   F
Sbjct: 293 AVTPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
             +++ E F+   R G +I+ +   
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP  + LE   M  + ++ G H    A+I     V +
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G GP+GL+ +  A+  GA RI+ V      +  AK  GA +IV    N +D   E + +
Sbjct: 173 LGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIM 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D +    G    M+TA+     GG +  V                  GM H 
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------- 51
           +++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C +         
Sbjct: 63  VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGT 122
Query: 52  -----MKFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-H 98
                 +F  +  P+H      + +   V   +   K+     LE+  +     S G   
Sbjct: 123 LQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A + A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   + 
Sbjct: 183 AVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHE 216
              N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+    
Sbjct: 242 ---NPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 217 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 271
             + + P         +  + G F+ K + P  +    + K  +  L+T+   F  +++ 
Sbjct: 299 QNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKIN 356
Query: 272 EAFETSARGGTAIKVMFNL 290
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGKSIRTVLTF 374

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 32/297 (10%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPP 59
           + +GHE  G + ++G  V     GD VA+     C  C  C  GR N C        TPP
Sbjct: 58  LTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPP 117
Query: 60  VHGSLANQ----VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN--IGPETNVLI 113
             GS  +     +V  A     + D   +    + +      HA  R    +GP +  ++
Sbjct: 118 GLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVV 177
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +G V +   RA  A R++ VD+DD RL++A+E+GAD  VK      D   E+   
Sbjct: 178 IGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG- 236
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTPAAVREVD 230
               G G    FD  G   T+ TA       G + +VG+    H ++   + P     V 
Sbjct: 237 ----GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT 292
Query: 231 VVGVFRYKNTWPLCLE---LLRSGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 280
                 Y  T    +E   L R+G++D+     H   F+  E   A+    E S RG
Sbjct: 293 -----PYWGTRSELMEVVALARAGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP  + LE   M  + ++ G H    A+I     V +
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G GP+GL+ +  A+  GA RI+ V      +  AK  GA +IV    N +D   E + +
Sbjct: 173 LGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIM 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D +    G    M+TA+     GG +  V                  GM H 
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
            + GHE  G +  VGS VK +  GDRV + P +  +C  C HC GG   LC E +     
Sbjct: 82  FIPGHEGVGFVSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEE-QLNTGY 139
Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
            V+G  A  VV   +    LP N+   E A  +C  ++V     +  +  P   V+I G 
Sbjct: 140 SVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGI 198
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G + +  ARA G   +  VD+DD +L +A+ +GA     V+ N + +A+    I+K 
Sbjct: 199 GGLGHMAVQYARAMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKE 253
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
              G       A   K    ALG    GG V L G+
Sbjct: 254 TDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGL 289

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 127/305 (41%), Gaps = 38/305 (12%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------- 54
           ++GHE AG++E VG  V  +  GD V       C  C  CK G+ NLC +++        
Sbjct: 65  ILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIM 124
Query: 55  -------FAT--PPVHGSLANQ------VVHPADLCFKLPDNVSLEEGAMCE---PLSVG 96
                  F+    P++  +         VVH   +  K+     L++  +     P  +G
Sbjct: 125 MNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA-KIDPTAPLDKVCLLGCGVPTGLG 183
Query: 97  VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156
                 A + P +NV I G G +GL     A+  GA RI+ +D+D  +   AK+ G +  
Sbjct: 184 A-VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF 242
Query: 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM--- 212
           V    + + I E +  +      G+D SF+C G    M  AL     G G   +VG+   
Sbjct: 243 VNPKDHDKPIQEVIVDLTDG---GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 299
Query: 213 GHHEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 270
           G    T P  L    V +    G F+ +   P  +E   + +I V   +TH       E+
Sbjct: 300 GQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EI 357
Query: 271 EEAFE 275
            +AF+
Sbjct: 358 NKAFD 362

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 35/304 (11%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-- 51
           +++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C       P+  
Sbjct: 63  VILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT 122
Query: 52  -----MKFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-H 98
                 +F     P+H      + +   V   +   K+     LE+  +     S G   
Sbjct: 123 LQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   + 
Sbjct: 183 AVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHE 216
              N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+    
Sbjct: 242 ---NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 217 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 271
             + + P         +  ++G F+ K   P  +    + K  +  L+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKIN 356
Query: 272 EAFE 275
           E F+
Sbjct: 357 EGFD 360

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 45/321 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C +      P  
Sbjct: 63  VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D  ++ +     PL          S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A   A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
              +    N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
           +      + + P         +  V G F+ K   P  +    + K  +  L+TH   F 
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFETSARGGTAIKVM 287
            +++ E F+    G +   V+
Sbjct: 353 -EKINEGFDLLHSGKSICTVL 372

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C +      P  
Sbjct: 63  VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D  ++ +     PL          S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A   A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
              +    N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
           +      + + P         +  V G F+ K   P  +    + K  +  L+TH   F 
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFE 275
            +++ E F+
Sbjct: 353 -EKINEGFD 360

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C +      P  
Sbjct: 63  VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D  ++ +     PL          S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A   A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
              +    N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
           +      + + P         +  V G F+ K   P  +    + K  +  L+TH   F 
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFE 275
            +++ E F+
Sbjct: 353 -EKINEGFD 360

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C +      P  
Sbjct: 63  VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59  --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
                         P+H  L           + + D  ++ +     PL          S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95  VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            G   A   A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
              +    N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
           +      + + P         +  V G F+ K   P  +    + K  +  L+TH   F 
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFE 275
            +++ E F+
Sbjct: 353 -EKINEGFD 360

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP  + LE   M  + ++ G H    ANI     V +
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++  +
Sbjct: 173 IGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--L 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHH 215
           +   G G+D      G   T + A+     G  +                    VGMGH 
Sbjct: 229 KATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 289 HIHGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 133/319 (41%), Gaps = 37/319 (11%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-------- 53
           V+GHE AG++E VG  V  + PGD V       C  C  CK G+ NLC +++        
Sbjct: 83  VLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVM 142
Query: 54  ---------FFATPPVH---GSLANQVVHPADLCFKLPDNVS-LEEGAMCE---PLSVGV 97
                        P  H    S  +Q     D+     D V+ LE+  +     P  +G 
Sbjct: 143 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGA 202
Query: 98  HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
                A + P + V + G G +GL     A+A GA RI+ +D+D  +   AK  G    +
Sbjct: 203 -VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFI 261
Query: 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---G 213
               + Q I + +  +      G+D SF+C G    M +AL     G G   +VG+   G
Sbjct: 262 NPKEHEQPIQQVIVDLTDG---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 318
Query: 214 HHEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 271
               T P  L    V +    G F+ ++  P  ++     +I V   +TH    +  ++ 
Sbjct: 319 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DIN 376
Query: 272 EAFETSARGGTAIKVMFNL 290
           +AF+     G  ++V+ ++
Sbjct: 377 KAFDL-MHDGDCLRVVLDM 394

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G       M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP ++ LE   M  + ++ G H    A+I     V +
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G GP+GL+ +  A+  GA RI+ V      +  AK  GA +IV    N +D   E + +
Sbjct: 173 LGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIM 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D +    G    M+TA+     GG +  V                  GM H 
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 289 TIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------- 52
           V+GHE +G+IE +G  V  L  GD V L  G  C +C  C  G    C E          
Sbjct: 62  VLGHEGSGIIEAIGPNVTELQVGDHVVLSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGAD 120
Query: 53  -----------------KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 95
                             FFA      S A   +   +   K+  +V +E   +  PL  
Sbjct: 121 SEGNHALCTHDQGVVNDHFFA----QSSFATYALSRENNTVKVTKDVPIE---LLGPLGC 173
Query: 96  GVH----ACRRA-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE 150
           G+     AC  A  + P ++ +  GAG +GL  +LAA+  GA  I+ VD+ + RL +AK+
Sbjct: 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233
Query: 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210
           +GA +++   T      + V  I++    G++ + +  G  + +   + A    GK+ +V
Sbjct: 234 LGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVV 288
Query: 211 G 211
           G
Sbjct: 289 G 289

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP  + LE   M  + ++ G H    A+I   ++V++
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D      G ++T+S A+     GG +  +                  GM H 
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
            + GHE  G +  VGS V  +  GDRV + P +  +C  C+HC  G   LC E +     
Sbjct: 63  FIPGHEGVGYVAAVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLC-ESQQNTGY 120
Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
            V+G  A  V+   +    LP NV   E A  +C  ++V     ++ N  P   V I G 
Sbjct: 121 SVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGI 179
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G V +  ARA G   +  +D+DD +L +A+++GA   V          + VE IQ+ 
Sbjct: 180 GGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRD 233
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233
           +G G       A  N     A+G    GG + LVG+   +   P+    ++ + + G
Sbjct: 234 IG-GAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP  + LE   M  + ++ G H    A+I   ++V++
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D      G ++T+S A+     GG +  +                  GM H 
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 125/298 (41%), Gaps = 42/298 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPP 59
           M++GHE  G I KVGS VK L  GD+V +      W  +  + G   +    +  +    
Sbjct: 55  MILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSN 114
Query: 60  VHGSLANQVVH----PADLCFKLPDNVSLEEGAMCEPL-SVGVHACRRANIGPETNVLIM 114
               + ++V H     A+L   LP ++  E+  M   + + G H    ANI     V ++
Sbjct: 115 FKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI 173
Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
           G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++  ++
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LK 229
Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHE 216
              G G+D      G   T + A+     G  +                    VGMGH  
Sbjct: 230 ATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKH 289
Query: 217 MTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
           +   LTP         G  R +        L+ +GK+D   L+THRF   +K VE+A 
Sbjct: 290 IHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 12/236 (5%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPP 59
            + GHE  G +  VGS V  +  GDRV +    S C  C+HC  G   LC E +      
Sbjct: 59  FIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLC-EKQQNTGYS 117
Query: 60  VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAG 117
           V+G     VV   +    LPD V   E A  +C  ++V     +  +  P   V+I G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIG 176
Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G V +  ARA G  R+  VD+DD +L++A+ +GA+    V+ N +D  +    +QK +
Sbjct: 177 GLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEI 230
Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233
           G G       A   K  S A+G    GG + L G+   +   P+    ++ + + G
Sbjct: 231 G-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 125/298 (41%), Gaps = 42/298 (14%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPP 59
           M++GHE  G I KVGS VK L  GD+V +      W  +  + G   +    +  +    
Sbjct: 55  MILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSN 114
Query: 60  VHGSLANQVVH----PADLCFKLPDNVSLEEGAMCEPL-SVGVHACRRANIGPETNVLIM 114
               + ++V H     A+L   LP ++  E+  M   + + G H    ANI     V ++
Sbjct: 115 FKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI 173
Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
           G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++  ++
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LK 229
Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHE 216
              G G+D      G   T + A+     G  +                    VGMGH  
Sbjct: 230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKH 289
Query: 217 MTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
           +   LTP         G  R +        L+ +GK+D   L+THRF   +K VE+A 
Sbjct: 290 IHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61  HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
            G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G 
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G + +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++  
Sbjct: 183 LGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
            G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG     
Sbjct: 239 KGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
            +  L  + L  +GK  VKP++T       +E  EA + 
Sbjct: 299 QSDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61  HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
            G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G 
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G + +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++  
Sbjct: 183 LGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
            G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG     
Sbjct: 239 KGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
            +  L  + L  +GK  VKP++T       +E  EA + 
Sbjct: 299 QSDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61  HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
            G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G 
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G + +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++  
Sbjct: 183 LGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
            G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG     
Sbjct: 239 KGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
            +  L  + L  +GK  VKP++T       +E  EA + 
Sbjct: 299 QSDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 34/264 (12%)
Query: 1   MVIGHECAGVIEKVGSEVKTL-----VPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKF 54
           +++GHE AG + +V  E + L      PGD +    GI+C  C  CK  +   LCP  K 
Sbjct: 73  IILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV 132
Query: 55  FAT-------PPVHGSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 106
           +         P + G  ++ +V  P     K+ +   L+  AM   +  G  A    +  
Sbjct: 133 YGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEY 190
Query: 107 PET----NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 162
           PE+     V+I GAGP+GL  ++ AR+ GA  ++++     RL +A+EIGAD    ++ N
Sbjct: 191 PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLN 246
Query: 163 LQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
            ++ +  VE+ +KA+     G G D   +  G ++ +         GG   + G+   + 
Sbjct: 247 RRETS--VEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD 304
Query: 218 TVPLTPAAVREVDVVGVFRYKNTW 241
            VP     V E  V+    +K  W
Sbjct: 305 PVPFK---VYEWLVLKNATFKGIW 325

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G       M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V++
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D      G ++T+S A+     GG +  +                  GM H 
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 289 TIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G       +    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V++
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D      G ++T+S A+     GG +  +                  GM H 
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 289 TIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 43/313 (13%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AG++E VG  V  L  GD V       C  C  C   + NLC +++      +
Sbjct: 63  VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 122
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
                ++               +  E  +   +SV                 G+      
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA   + 
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
              N QD ++ ++++   M   G+D SF+C G  K M  AL A   G            +
Sbjct: 242 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 294
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
                  A R   +V    +K T    W      P  +    S KI V   VTH   F  
Sbjct: 295 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 353
Query: 268 KEVEEAFETSARG 280
            E+ +AFE    G
Sbjct: 354 -EINKAFELMHSG 365

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 43/313 (13%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AG++E VG  V  L  GD V       C  C  C   + NLC +++      +
Sbjct: 62  VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
                ++               +  E  +   +SV                 G+      
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA   + 
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 240
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
              N QD ++ ++++   M   G+D SF+C G  K M  AL A   G            +
Sbjct: 241 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 293
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
                  A R   +V    +K T    W      P  +    S KI V   VTH   F  
Sbjct: 294 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 352
Query: 268 KEVEEAFETSARG 280
            E+ +AFE    G
Sbjct: 353 -EINKAFELMHSG 364

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 43/313 (13%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AG++E VG  V  L  GD V       C  C  C   + NLC +++      +
Sbjct: 63  VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 122
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
                ++               +  E  +   +SV                 G+      
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA   + 
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
              N QD ++ ++++   M   G+D SF+C G  K M  AL A   G            +
Sbjct: 242 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 294
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
                  A R   +V    +K T    W      P  +    S KI V   VTH   F  
Sbjct: 295 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 353
Query: 268 KEVEEAFETSARG 280
            E+ +AFE    G
Sbjct: 354 -EINKAFELMHSG 365

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 118/290 (40%), Gaps = 30/290 (10%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+GHE AG++E VG  V    PG++V       C  C  C+  + N C +     +P V
Sbjct: 64  VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDV 123
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
                 +         +     +  +  +   ++V                 GV      
Sbjct: 124 MSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGA 183
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++   + GA RI+ VD++  +   AK  GA + V 
Sbjct: 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN 243
Query: 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG--HH 215
            + + + I++ + K+      G+D S +C G    M  AL +   G G   LVG    H 
Sbjct: 244 PNDHSEPISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300
Query: 216 EMTVPLTPAAVR--EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 263
             T P+   A R  +  + G F+ K+  P  ++     K+ +   +THR 
Sbjct: 301 VATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 12/217 (5%)
Query: 3   IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
           +GHE  G IE+V   V+ L  GD V L P ++   C  C+ G    C  ++F     + G
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDG 135
Query: 63  SLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGVHACRRAN-----IGPETNVLIMGA 116
             A  +        KLP ++S E+     PL+  G+ A R        + P   V I+G 
Sbjct: 136 GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV 195
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G + +   +      ++ +DV + +L +A+ +GAD++V      +D  ++V ++ + 
Sbjct: 196 GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR- 251
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213
            G G++V+ D  G   T+          G++ +VG G
Sbjct: 252 -GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 287

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 46/300 (15%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G       M    KF  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114
Query: 57  TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
               V G   +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V++
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
           +G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIEDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
               G G+D      G ++T+S A+     GG +  +                  GM H 
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
            +   L P         G  R +       +++   ++D+  LVTH + GF    +EEA 
Sbjct: 289 TIKGGLCPG--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 15/278 (5%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61  HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
            G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G 
Sbjct: 123 DGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G   +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++  
Sbjct: 183 LGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
            G+D   D     KT+S    A    GK   VG+   ++        + E+  VG     
Sbjct: 239 KGVDAVIDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPLCL-ELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
            +  L +  L  +GK  VKP +T        ++EEA E
Sbjct: 299 QSDFLGIXRLAEAGK--VKPXIT-----KTXKLEEANE 329

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 119/313 (38%), Gaps = 43/313 (13%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GH  AG++E VG  V  L  GD V       C  C  C   + NLC +++      +
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
                ++               +  E  +   +SV                 G+      
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA   + 
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 240
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
              N QD ++ ++++   M   G+D SF+C G  K M  AL A   G            +
Sbjct: 241 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 293
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
                  A R   +V    +K T    W      P  +    S KI V   VTH   F  
Sbjct: 294 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 352
Query: 268 KEVEEAFETSARG 280
            E+ +AFE    G
Sbjct: 353 -EINKAFELMHSG 364

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 1   MVIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 54
           + +GHE +GV+ + G E       K    G+ V  E  + C  C  C  G  N C  +  
Sbjct: 93  VTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNE 152
Query: 55  FATPPVHGSLANQVVHPADLCFKLPDNVSLEEG-------AMCEPLSVGVHAC--RRANI 105
                V G+ A  V   A   + L +   + EG       ++ EP SV  +A   R   I
Sbjct: 153 LGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGI 211
Query: 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
            P  NV+I+G GPIGL  +   +  GA ++++ +  + R ++AKE+GAD+++
Sbjct: 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVI 263

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE  GV+E +G+ V  + PGD+V       C  C  CK    N C +    A   +
Sbjct: 64  VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-------VHAC------------- 100
              + ++        + L    +  E  +   ++V        + +C             
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAA 183
Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
              A + P +   + G G +G   ++  +A GA RI+ V     +   A E+GA   +  
Sbjct: 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL-- 241
Query: 160 STNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMG---H 214
             N +D  + + E I +    G+D + +CAG  +TM  AL +T C  G   ++G+     
Sbjct: 242 --NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299
Query: 215 HEMTVPLTPAAVREV--DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
                PL     R +   V G F+ +    L  + ++  KI+V  LV+ +    Q  + +
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INK 356
Query: 273 AFETSARGGTAIKVMF 288
           AFE  + G     +M 
Sbjct: 357 AFELLSSGQGVRSIMI 372

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 34/303 (11%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
           +++GHE  G++E +G  V T+ PGD+V       C  C+ C+    NLC           
Sbjct: 63  VIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL 122
Query: 58  -----------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC 100
                       PVH      +     V       K+ D    E+  +     S G  A 
Sbjct: 123 ADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAA 182
Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
            +   + P +  ++ G G +GL  ++  ++ GA RI+ +D++  +   A  +GA   +  
Sbjct: 183 VKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP 242
Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEM 217
             + + I+E + ++    G  +  +F+  G  +TM  AL A+C    G   +VG+     
Sbjct: 243 KDSTKPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAK 298
Query: 218 TVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
            +   P  +         V G  + ++  P  +    + K D+  L+TH   F  K++ E
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISE 356
Query: 273 AFE 275
            FE
Sbjct: 357 GFE 359

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 34/303 (11%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
           +++GHE  G++E +G  V T+ PGD+V       C  C+ C+    NLC           
Sbjct: 63  VIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL 122
Query: 58  -----------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC 100
                       PVH      +     V       K+ D    E+  +     S G  A 
Sbjct: 123 ADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAA 182
Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
            +   + P +  ++ G G +GL  ++  ++ GA RI+ +D++  +   A  +GA   +  
Sbjct: 183 VKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP 242
Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEM 217
             + + I+E + ++    G  +  +F+  G  +TM  AL A+C    G   +VG+     
Sbjct: 243 KDSTKPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAK 298
Query: 218 TVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
            +   P  +         V G  + ++  P  +    + K D+  L+TH   F  K++ E
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISE 356
Query: 273 AFE 275
            FE
Sbjct: 357 GFE 359

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PEMKF- 54
           V+GHE  G + + GS+V+ +  GD V++   ++C RC +CK  R ++C      P+    
Sbjct: 63  VLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLG 122
Query: 55  ---FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEPLSVGVHACRRAN 104
              F      G  A  V+ P AD +  K  D     E       + + L  G H C  A 
Sbjct: 123 AFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAG 182
Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 164
           + P ++V I GAGP+G      AR  GA  +++ D +  RL +  + G + I     +L+
Sbjct: 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI-----DLR 237
Query: 165 DIAEEVEKIQKAMGT-----GID-VSFDCAGL---------NKTMSTALGATCAGGKVCL 209
           + A   ++I + +G      G+D V F+  GL         N  +++      AGG + +
Sbjct: 238 NSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297
Query: 210 VGM 212
            G+
Sbjct: 298 PGI 300

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPP 59
           +V GHE  G + +VGS+VK +  GD+V +   + +C  C+ C     N CP+M       
Sbjct: 72  LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131
Query: 60  VH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNV 111
            H      G  +N +V       + PDN+ L+ GA  +C  ++V           P  ++
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHI 191
Query: 112 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 171
            I+G G +G V +  A+AFG+   VI      +    K  GAD+ +        ++ + E
Sbjct: 192 GIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL--------VSRDQE 243
Query: 172 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 220
           ++Q A GT +D   D       +    G   + GK+ LVG     + +P
Sbjct: 244 QMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELP 291

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------- 53
           +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +        
Sbjct: 63  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 122
Query: 54  --FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGA-----MCEPLSVGVHACRRAN 104
             +       G  A  V+ P AD    KLPD     E       + + L  G H    A 
Sbjct: 123 YGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAG 182
Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 152
           +GP + V + GAGP+GL    +AR  GA  +++ D++  RL+ AK  G
Sbjct: 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG 230

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 17/266 (6%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AG I +VG E+  +  GD V +        C +C+ G++N+C           
Sbjct: 61  IILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA----NIGPETNVLIMGA 116
            G     +V  +    KL     +E   + +  +  + A R+A    +   E  V++ G 
Sbjct: 120 GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGI 179
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
           G + + T+   +A     I IV +   +     A E+GAD +    + ++D    + K+ 
Sbjct: 180 GGLAVYTIQILKAL-MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLT 234
Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 234
             +G  I  + D  G  +T           G + LVGM    +++     AV    ++G 
Sbjct: 235 DGLGASI--AIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGS 292
Query: 235 -FRYKNTWPLCLELLRSGKIDVKPLV 259
            +   N     + L  SGKI  KP +
Sbjct: 293 NYGSLNDLEDVVRLSESGKI--KPYI 316

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 38/203 (18%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+G E A V+E+VG  V     G+RV      +C                      PP+
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVC-----TC---------------------LPPL 95
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPETNVLI-MG 115
            G+ + + ++PA+   K+P ++ L++    G M + ++      +   + P   VLI   
Sbjct: 96  -GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAA 154
Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
           AG +G + +  AR  GA  I  V  ++ +   A+++G  + +  ST  QD AE V +I  
Sbjct: 155 AGGMGHIMVPWARHLGATVIGTVSTEE-KAETARKLGCHHTINYST--QDFAEVVREITG 211
Query: 176 AMGTGIDVSFDCAGLNKTMSTAL 198
             G G+DV +D  G   T+  +L
Sbjct: 212 --GKGVDVVYDSIG-KDTLQKSL 231

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 24/287 (8%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V   + +GV+E VG  V    PGDRV     IS +      G R        +      
Sbjct: 85  FVPASDXSGVVEAVGKSVTRFRPGDRV-----ISTFAPGWLDGLRPGTGRTPAYETLGGA 139
Query: 61  H-GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAG 117
           H G L+  VV P       P ++   E +   C  L+       + ++     V++ G G
Sbjct: 140 HPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTG 199
Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            + L  +  A+A GA  +++      +L  A  +GAD+ +     L++  + VE++    
Sbjct: 200 GVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALT 253
Query: 178 GT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF 235
           G  G D   + AG    +  +L A    G++ ++G +   E++ P+ P  ++   V G+ 
Sbjct: 254 GDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGIS 312
Query: 236 RYKNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 280
                    LE L     ++ +KP++  R+ F+  EV EA     RG
Sbjct: 313 VGHRR---ALEDLVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPP 59
           +V GHE AGV+  +G  VK    GD   ++    SC  C++C+ G  + CP         
Sbjct: 62  LVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH 121
Query: 60  VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-A 116
             GS        A     +P    L + A  +C  ++V   A + AN+     V I G A
Sbjct: 122 -DGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAA 179
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G + +  A+A G  R++ +D  + +  + + IG +  +   T  +DI   V K    
Sbjct: 180 GGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDG 237
Query: 177 MGTG-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
              G I+VS   A +  +         A G   LVGM
Sbjct: 238 GAHGVINVSVSEAAIEASTRYVR----ANGTTVLVGM 270

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM------- 52
           M+ GHE AG+I++VG  VK    GD V +   + SC  C  CK  +   C ++       
Sbjct: 60  MIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCL 119
Query: 53  -KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPET 109
             F    P  G  +N +V   +    +  N  LE+ A  +C  ++      + + +   T
Sbjct: 120 DSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGT 178
Query: 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 169
            V + G G +G + +  A A GA  + +   ++++   A  +G  +     T+ +   EE
Sbjct: 179 KVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEE 234
Query: 170 VEKIQKAMGTGIDV 183
           ++ I   + T  D+
Sbjct: 235 LDFIISTIPTHYDL 248

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 43/243 (17%)
Query: 4   GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
           G + AGVIE VG        GDRV                           F +  + G 
Sbjct: 92  GSDVAGVIEAVGDNASAFKKGDRV---------------------------FTSSTISGG 124
Query: 64  LANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIG 120
            A   +      +KLP+ +  ++GA    P      A    A +    +VL+ GA G +G
Sbjct: 125 YAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVG 184
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG-T 179
           L     ARA+G   +     ++ +  V +  GA  +     N +++   ++KI+K +G  
Sbjct: 185 LAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEK 238
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRY 237
           GID+  +    N  +S  L     GG+V +VG      T+ + P     +E  ++GV  +
Sbjct: 239 GIDIIIEMLA-NVNLSKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLF 294
Query: 238 KNT 240
            +T
Sbjct: 295 SST 297

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
           +L   AG +GL+     +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V
Sbjct: 153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQV 209
Query: 171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP------LTPA 224
            K     G G+D SFD  G + T   +L A    G    V  G+    +P      L+P 
Sbjct: 210 LKFTN--GKGVDASFDSVGKD-TFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPK 264
Query: 225 AVREV--DVVGVFRYKNTWPLCLE----LLRSGKIDVKPLVTH 261
            +  V   + G       W    +    L+ S K+++K   T+
Sbjct: 265 NITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G +  GV+E VG+EV     GD V                          +  +P  +
Sbjct: 62  VLGFDAIGVVESVGNEVTMFNQGDIVY-------------------------YSGSPDQN 96
Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-----------VGVHACRRANIGPETN 110
           GS A   +    L  K P N+S E+ A+  PL+            G+   R  N G +T 
Sbjct: 97  GSNAEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTL 154
Query: 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154
           ++I GAG +G +    A+A+G  R++     +  +   K++GAD
Sbjct: 155 LIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V G EC+G++E +G  VK    GDRV      + W                        
Sbjct: 62  LVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAW------------------------ 97
Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAGP 118
               A  V  P +  +K+PD++S  E A      ++  V     AN+    +VL+  AG 
Sbjct: 98  ----AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG 153
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI-AEEVEKIQKAM 177
            G+   +A      P + +          A     + I    T+L D  A+ V+++++  
Sbjct: 154 -GVGQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRIS 205
Query: 178 GTGIDVSFDC 187
             G+D+  DC
Sbjct: 206 AEGVDIVLDC 215

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 37/279 (13%)
Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFFATP 58
           VIG + AGV+ + G  V     GD V       C   +      +N   L PE + +   
Sbjct: 120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIWGFE 175
Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNVL 112
              G LA   +  ++     PD++S EE A   P  V   A R+      A +    NVL
Sbjct: 176 TNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 113 IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---------N 162
           I GA G +G      A A GA  I +V     +  + + +GA+ I+  +          N
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRNAEGYRFWKDEN 292
Query: 163 LQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKV--CLVGMGH- 214
            QD  +E ++  K +     G  ID+ F+  G  +T   ++  T  GG +  C    G+ 
Sbjct: 293 TQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTITTCASTSGYM 350
Query: 215 HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 253
           HE        +++ +       Y+  W     L+  G+I
Sbjct: 351 HEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	290
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-146
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-143
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-141
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-132
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-131
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-131
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-125
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-104
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-104
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-83
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	6e-71
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-61
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-57
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-53
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-51
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-45
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-44
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	5e-43
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	6e-42
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	6e-41
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-40
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	4e-40
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	4e-39
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-37
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-35
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	7e-35
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-34
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	6e-34
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-33
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-32
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	5e-32
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-29
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	8e-26
4eye_A	342	Probable oxidoreductase; structural genomics, niai	9e-23
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-22
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-21
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-21
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-21
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	7e-21
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	8e-20
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-19
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-19
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-19
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-19
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-19
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	6e-19
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	9e-19
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	1e-18
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-18
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-17
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-17
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	4e-17
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-16
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-16
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-14
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	7e-14
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-13
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-13
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-11
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	2e-05
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	3e-05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-04
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	2e-04
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  413 bits (1064), Expect = e-146
 Identities = 142/289 (49%), Positives = 191/289 (66%), Gaps = 5/289 (1%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           +VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S   +   E   K++  +G  
Sbjct: 185 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCK 242

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
            +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NT
Sbjct: 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT 302

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
           WP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 303 WPVAISMLASKSVNVKPLVTHRFPL--EKALEAFET-FKKGLGLKIMLK 348

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  405 bits (1043), Expect = e-143
 Identities = 146/290 (50%), Positives = 193/290 (66%), Gaps = 4/290 (1%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP 
Sbjct: 62  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 121

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+LA   VH AD C KLPDNVSLEEGA+ EPLSVGVHACRRA +   T VL++GAGPIG
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIG 181

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           LV++LAA+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G  
Sbjct: 182 LVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDL 240

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
            +V+ DC+G  K ++  +  T  GG + LVGMG   +TVPL  A  RE+D+  VFRY N 
Sbjct: 241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCND 300

Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 289
           +P+ LE++ SG+ +VK LVTH F    ++  +AFE + +     IKVM +
Sbjct: 301 YPIALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMIS 348

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  400 bits (1029), Expect = e-141
 Identities = 121/290 (41%), Positives = 175/290 (60%), Gaps = 8/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V+GHE AG +  V   VK++  GDRVA+EP + C  C+ C  GRYN C  + F +TPPV
Sbjct: 74  HVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPV 133

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G L   V HPA  C K+ + +S E GAM EPLSV +   +RA +     VLI GAGPIG
Sbjct: 134 PGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIG 192

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEEVEKIQKAMG 178
           L+TML A+A GA  +VI D+D+ RL  AKEI  + +      L  ++ A+++ +     G
Sbjct: 193 LITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVES--FGG 250

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
               V+ +C G+  +++ A+ A   GGKV ++G+G +E+ +P   A+VREVD+   +RY 
Sbjct: 251 IEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYC 310

Query: 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVM 287
           NTWP  + L+ +G +D+  LVTHRF    ++  +AFET++     AIKV 
Sbjct: 311 NTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQ 358

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  378 bits (973), Expect = e-132
 Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 13/292 (4%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V GHE +GV+E VG  V+    GD V+LE  I C  C  C+ G Y++C   +       
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR- 117

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A  VV PA+  +  P ++  E  A+ EP    VH     +     +VLI GAGPIG
Sbjct: 118 DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIG 177

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+  +  RA GA  I++ D + YRL+ A+      +  +  +L      +E +++  G+G
Sbjct: 178 LMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDL------LEVVRRVTGSG 231

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
           ++V  + +G    +   L A   GG+  ++G+    +   L    V R +   G+   R 
Sbjct: 232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRL 291

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
             TW     L+ SG++D+ PL+THR   S     EAF      G A+KV+ +
Sbjct: 292 WQTWMQGTALVYSGRVDLSPLLTHRLPLS--RYREAFGL-LASGQAVKVILD 340

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  375 bits (966), Expect = e-131
 Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 8/290 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC  ++       
Sbjct: 77  VTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHR- 135

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A  V+ P    F++P  +    GA CEPL+  +H    + I   + V I+G G IG
Sbjct: 136 DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIG 195

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+T+  AR  GA  +++      +  +A+E+GA   V  S    D+ E +      +  G
Sbjct: 196 LLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEAIAGPVGLVPGG 253

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYK 238
           +DV  +CAG+ +T+  +     AGG V ++G+      V + P  +  RE+ V+G F   
Sbjct: 254 VDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP 313

Query: 239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288
                  +L+ +G I++  +++ R      E  +           +KV+ 
Sbjct: 314 FVHRRAADLVATGAIEIDRMISRRISLD--EAPDVISN-PAAAGEVKVLV 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  373 bits (961), Expect = e-131
 Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 16/297 (5%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +   
Sbjct: 55  ITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR- 113

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A  +V      F LP ++ +E+GA  EP++VG+HA   A      NV+I+GAG IG
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIG 173

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+ +  A A GA  +  +D+   +L++AK  GA      S       +    +       
Sbjct: 174 LLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--RELRF 229

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---AAVREVDVVGVFRY 237
             +  + AG+ +T+  A+       ++ LVG  H ++ +          +E+ V+G +  
Sbjct: 230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMN 289

Query: 238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288
                    W     LL   K+ ++PL+ HR  F      +A    AR     KV+ 
Sbjct: 290 YSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFE--SFAQAVRDIARNAMPGKVLL 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  359 bits (925), Expect = e-125
 Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 11/293 (3%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            ++GHE AG + ++G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F     
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DT 121

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G  A   V PA   +K P ++  E   + EPL   V       I  ++ VLI GAGP+G
Sbjct: 122 DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLG 180

Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
           L+ +  A+A GA  +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI--TDGNG 236

Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
           +DV  + +G  K +   L A    G+V L+G+   ++T+      + + + + G+     
Sbjct: 237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHL 296

Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
             TW     LL+SGK+++ P++TH++     + EEAFE   R G   KV+F L
Sbjct: 297 WETWYTVSRLLQSGKLNLDPIITHKY-KGFDKYEEAFEL-MRAGKTGKVVFML 347

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  308 bits (791), Expect = e-104
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 30/310 (9%)

Query: 1   MVIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 54
           + +GHE +GV+ + G E       K    G+ V  E  + C  C  C  G  N C  +  
Sbjct: 93  VTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE 152

Query: 55  FATPPVHGSLANQVVHPADLCFKLPD-------NVSLEEGAMCEPLSVGVHAC--RRANI 105
                V G+ A  V   A   + L +       +     G++ EP SV  +A   R   I
Sbjct: 153 LGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGI 211

Query: 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 165
            P  NV+I+G GPIGL  +   +  GA ++++ +  + R ++AKE+GAD+++  +   ++
Sbjct: 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK--EN 269

Query: 166 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA---GGKVCLVGMGHHEMTVPLT 222
             E V       G G  +  +  G+ + +   +        G    +  +   +  +PLT
Sbjct: 270 FVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLT 327

Query: 223 PAAV--REVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 278
                 R   +VG   +    T+P  + L+ SG +D+  +++        E+ E  +   
Sbjct: 328 GEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSME--EIPEYIKRLQ 384

Query: 279 RGGTAIKVMF 288
              + +KV  
Sbjct: 385 TDKSLVKVTM 394

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  306 bits (786), Expect = e-104
 Identities = 60/309 (19%), Positives = 114/309 (36%), Gaps = 38/309 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG--ISCWRCDHCKGGRYNLCPEMKFFATP 58
           +V+GHE  GV+  V      L  GD V        +    ++ +  + ++ P+  +F   
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 59  PV--HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANI------GPETN 110
            V  HG ++     P     ++P + + E G + EP+S+   A   A           ++
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSS 175

Query: 111 VLIMGAGPIGLVTMLAARAF--GAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQD 165
             ++G G +GL+T+   +    G   +  +   D  D  + + +E+ A  +    T ++D
Sbjct: 176 AFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED 235

Query: 166 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 225
           + +  E         +D  ++  G  K    ++ A    G   L+G+           A 
Sbjct: 236 VPDVYE--------QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAF 287

Query: 226 -----VREVDVVGVFRYKN--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 278
                +    +VG             +   +  K  ++ LVT     S  E E AF+   
Sbjct: 288 HREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLS--EFEAAFD--- 342

Query: 279 RGGTAIKVM 287
              T IK  
Sbjct: 343 DDDTTIKTA 351

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  255 bits (652), Expect = 1e-83
 Identities = 57/315 (18%), Positives = 107/315 (33%), Gaps = 42/315 (13%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATP 58
           +V+GHE  GV+E+          GD V       C  C +C  GR + C   +F      
Sbjct: 62  LVLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118

Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA--------------N 104
            + G +            K+P ++  + G + +PL+    +                   
Sbjct: 119 KMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDG 177

Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 164
                 VL++G GPIG++  L  R +G    +    +   +               TN  
Sbjct: 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK------TNYY 231

Query: 165 DIAEEVEKIQKAMGTGIDVSFDCAGLNKT-MSTALGATCAGGKVCLVGMGHHEMTVPLTP 223
           + +   +K++ ++G   DV  D  G +   +   +      G + L G      +VPL  
Sbjct: 232 NSSNGYDKLKDSVG-KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFS-TSGSVPLDY 289

Query: 224 AAV-----REVDVVGVFRYKNT-WPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEA 273
             +         ++G+   +   +   +  L S K       K L+T     +  + +E 
Sbjct: 290 KTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSIN--DEKEL 347

Query: 274 FETSARG-GTAIKVM 287
            +         IK+ 
Sbjct: 348 LKVLREKEHGEIKIR 362

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  222 bits (568), Expect = 6e-71
 Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 26/308 (8%)

Query: 1   MVIGHECAGVIEKVGSEVK-----TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKF 54
           +++GHE AG + +V  E +      L PGD +    GI+C  C  CK      LCP  K 
Sbjct: 73  IILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV 132

Query: 55  FATP-------PVHGSLANQ-VVHPADLCFKLPDNVSLEEGAMCEP-LSVGVHACRR-AN 104
           +           + G  ++  V+ P     K+ +   L+  AM     +   HA      
Sbjct: 133 YGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPE 192

Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNL 163
                 V+I GAGP+GL  ++ AR+ GA  ++++     RL +A+EIGAD  +    T++
Sbjct: 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSV 252

Query: 164 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 223
           ++  + +  I    G G D   +  G ++ +         GG   + G+   +  VP   
Sbjct: 253 EERRKAIMDI--THGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKV 310

Query: 224 AAVR---EVDVVGVFRYKNT-WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR 279
                       G++    + +   + +       +  L+THR      E  +A E    
Sbjct: 311 YEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLK--EANKALEL-ME 367

Query: 280 GGTAIKVM 287
              A+KV+
Sbjct: 368 SREALKVI 375

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  196 bits (500), Expect = 6e-61
 Identities = 79/302 (26%), Positives = 123/302 (40%), Gaps = 23/302 (7%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATP 58
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     M      + 
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114

Query: 59  PVHGSLANQV-VHPADL-CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMG 115
              G       V+ AD+    LP  + LE   M  + ++ G H    ANI     V ++G
Sbjct: 115 VKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIG 174

Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
            GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++ K   
Sbjct: 175 IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKATD 232

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA----VREVDV 231
             G G+D      G   T + A+     G  +  V        + +  +     +    +
Sbjct: 233 --GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHI 290

Query: 232 VG----VFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFET-SARGGTAIK 285
            G      R        ++L+   ++D   LVTH F GF    +E+AF     +    IK
Sbjct: 291 HGGLCPGGRL--RMERLIDLVFYKRVDPSKLVTHVFRGFD--NIEKAFMLMKDKPKDLIK 346

Query: 286 VM 287
            +
Sbjct: 347 PV 348

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  187 bits (476), Expect = 1e-57
 Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 18/281 (6%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRANIGPETNVLIMGA 116
            G+ A  V+ P          ++  E A   PL+  G+    A R+A++ P   +L++GA
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGA 179

Query: 117 -GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
            G +G + +  A+A     I+ VDV +  +  AK  GAD ++  S   QD   E+ +I +
Sbjct: 180 GGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRITE 237

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 235
               G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG  
Sbjct: 238 --SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSL 295

Query: 236 RY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
              ++ +   + L  +GK  VKP++T        E  EA +
Sbjct: 296 VGNQSDFLGIMRLAEAGK--VKPMITKTMKLE--EANEAID 332

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  176 bits (448), Expect = 3e-53
 Identities = 74/291 (25%), Positives = 115/291 (39%), Gaps = 24/291 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP- 59
           + +GHE  G + ++G  V     GD VA+     C  C  C  GR N C         P 
Sbjct: 58  LTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPP 117

Query: 60  ---VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRR--ANIGPETNVL 112
                GS+A  ++  +        ++     A      L+   HA  R    +GP +  +
Sbjct: 118 GLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAV 176

Query: 113 IMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
           ++G G +G V +   RA  A R++ VD+DD RL++A+E+GAD  VK        A+ + +
Sbjct: 177 VIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRE 233

Query: 173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 232
           +    G G    FD  G   T+ TA       G + +VG+                  VV
Sbjct: 234 LTG--GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVV 291

Query: 233 GVFRYKNTW---PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
               Y  T       + L R+G++D   + T  F     E   A+     G
Sbjct: 292 TP--YWGTRSELMEVVALARAGRLD---IHTETFTLD--EGPAAYRRLREG 335

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  171 bits (436), Expect = 2e-51
 Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 23/284 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             +GHE  G IE+V   V+ L  GD V L P ++   C  C+ G    C  ++F     +
Sbjct: 75  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NI 133

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRA--NIGPETNVLIM 114
            G  A  +        KLP ++S E+     PL+  G+    A ++A   + P   V I+
Sbjct: 134 DGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV 193

Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
           G G +G + +   +      ++ +DV + +L +A+ +GAD++V      +D  ++V ++ 
Sbjct: 194 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELT 250

Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 234
           +  G G++V+ D  G   T+          G++ +VG G  E+  P       EV   G 
Sbjct: 251 R--GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGS 307

Query: 235 FRYKNTW---PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
                 +      + L   GK+    +          E+ +  E
Sbjct: 308 --LVGNYVELHELVTLALQGKVR---VEVDIHKLD--EINDVLE 344

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  153 bits (390), Expect = 8e-45
 Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 30/287 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE AG I +VG E+  +  GD V +        C +C+ G++N+C           
Sbjct: 61  IILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT-T 118

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-GV---HACRRA----NIGPETNVL 112
           +G  +  ++  +       +++S  E A   PL+  G     A R+A    +   E  V+
Sbjct: 119 NGGFSEYMLVKSSRWLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVI 175

Query: 113 IMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 171
           + G G + + T+   +A      IV +         A E+GAD +      ++D    + 
Sbjct: 176 VNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLIN 231

Query: 172 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV 231
           K+    G G  ++ D  G  +T           G + LVGM    +++     AV    +
Sbjct: 232 KLTD--GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKL 289

Query: 232 VGVFRYKNTWPLCLELL---RSGKIDVKPLVTHRFGFSQKEVEEAFE 275
           +G      +     +++    SGKI        +      ++ +AF 
Sbjct: 290 LGS--NYGSLNDLEDVVRLSESGKIKP---YIIKVPLD--DINKAFT 329

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  154 bits (391), Expect = 1e-44
 Identities = 77/317 (24%), Positives = 126/317 (39%), Gaps = 53/317 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------- 53
            V+GHE +G+IE +G  V  L  GD V L  G  C +C  C  G    C E         
Sbjct: 61  AVLGHEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 54  -------------------FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 94
                              FFA      S A   +   +   K+  +V +E      PL 
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIELLG---PLG 172

Query: 95  VGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK 149
            G+            + P ++ +  GAG +GL  +LAA+  GA  I+ VD+ + RL +AK
Sbjct: 173 CGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK 232

Query: 150 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL 209
           ++GA +++    N +   + V  I++    G++ + +  G  + +   + A    GK+ +
Sbjct: 233 QLGATHVI----NSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV 287

Query: 210 VGMGHHEMTVPLTPAA--VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRF 263
           VG      T         +    ++GV       K   P  + L + GK     LV   +
Sbjct: 288 VGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-Y 346

Query: 264 GFSQKEVEEAFETSARG 280
            F   E+ +A   S +G
Sbjct: 347 AFD--EINQAAIDSRKG 361

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  150 bits (382), Expect = 5e-43
 Identities = 68/336 (20%), Positives = 120/336 (35%), Gaps = 56/336 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------ 54
            V+GHE  G + + GS+V+ +  GD V++   ++C RC +CK  R ++C           
Sbjct: 62  HVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADL 121

Query: 55  ----FATPPVHGSLANQV-VHPADL-CFKLPDNVSLEEG-----AMCEPLSVGVHACRRA 103
               F      G  A  V V  AD    K  D     E       + + L  G H C  A
Sbjct: 122 GAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSA 181

Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 163
            + P ++V I GAGP+G      AR  GA  +++ D +  RL +  + G + I     +L
Sbjct: 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI-----DL 236

Query: 164 QDIAEEVEKIQKAM-GTGIDVSFDCAGL--------------NKTMSTALGATCAGGKVC 208
           ++ A   ++I + +    +D   D  G               N  +++      AGG + 
Sbjct: 237 RNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG 296

Query: 209 LVGMGHHEMTVPLTPAAVREVDVV--GVFRYKN------------TWPLCLELLRSGKID 254
           + G+       P+   A      +  G    K+                  E +   ++ 
Sbjct: 297 IPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMP 356

Query: 255 VKP--LVTHRFGFSQKEVEEAFETSARGGTAIKVMF 288
                +          +  + +    +G    K + 
Sbjct: 357 YLSKVMNIEVITLD--QAPDGYAKFDKGS-PAKFVI 389

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  147 bits (374), Expect = 6e-42
 Identities = 65/337 (19%), Positives = 121/337 (35%), Gaps = 59/337 (17%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------- 53
           +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +        
Sbjct: 63  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 122

Query: 54  --FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGVHACRRAN 104
             +       G  A  V+ P AD    KLPD     E       + + L  G H    A 
Sbjct: 123 YGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAG 182

Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 164
           +GP + V + GAGP+GL    +AR  GA  +++ D++  RL+ AK  G +      +   
Sbjct: 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDT 240

Query: 165 DIAEEVEKIQKAMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCL 209
            + E++  +       +D + D  G                   +++ +  T   GK+ +
Sbjct: 241 PLHEQIAALLG--EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298

Query: 210 VG-------------MGHHEMTVPLTPAAVREVDVVG----VFRYKNTWPLCLELLRSGK 252
            G                  +++       +          V +Y       ++ +   +
Sbjct: 299 PGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKY---NRALMQAIMWDR 355

Query: 253 IDVKPLV-THRFGFSQKEVEEAFETSARGGTAIKVMF 288
           I++  +V          +    +      G   K + 
Sbjct: 356 INIAEVVGVQVISLD--DAPRGYGEFDA-GVPKKFVI 389

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  144 bits (366), Expect = 6e-41
 Identities = 79/315 (25%), Positives = 133/315 (42%), Gaps = 45/315 (14%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +V+GHECAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P  
Sbjct: 63  VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122

Query: 59  -----------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG 96
                             ++      S +   V       ++ D  +LE       +  G
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVC---LIGCG 179

Query: 97  VH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 151
                  A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239

Query: 152 GADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCL 209
           GA + +    N +++ + V + I +    G+D S DCAG  +T+  A+  T  G G   +
Sbjct: 240 GATDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTV 295

Query: 210 VGMGHHEMTVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
           VG    EMT+P     +    + G F    +  ++ P  +   ++ K D+  LVTH   F
Sbjct: 296 VGAKVDEMTIPTVD-VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

Query: 266 SQKEVEEAFETSARG 280
               + +A +    G
Sbjct: 355 E--SINDAIDLMKEG 367

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  143 bits (364), Expect = 1e-40
 Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 41/312 (13%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GH  AG++E VG  V  L  GD V       C  C  C   + NLC +++       
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121

Query: 59  -------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-- 98
                         +       + +   V       K+     L++  +   L  G+   
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCL---LGCGISTG 178

Query: 99  ---ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155
              A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA  
Sbjct: 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 238

Query: 156 IVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG 213
            +    N QD ++ + E + +    G+D SF+C G  K M  AL A   G G   +VG+ 
Sbjct: 239 CI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA 294

Query: 214 HHEMTVPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
                +   P   V      G      +   + P  +    S KI V   VTH   F   
Sbjct: 295 ASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD-- 352

Query: 269 EVEEAFETSARG 280
           E+ +AFE    G
Sbjct: 353 EINKAFELMHSG 364

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  142 bits (360), Expect = 4e-40
 Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 41/307 (13%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +         
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGT 122

Query: 59  -------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-- 98
                        P+H      + +   V       K+     LE+  +   +  G    
Sbjct: 123 MQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCL---IGCGFSTG 179

Query: 99  ---ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155
              A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA  
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 156 IVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG 213
            V    N QD  + + E + +    G+D SF+  G   TM TAL       G   +VG+ 
Sbjct: 240 CV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVP 295

Query: 214 HHEMTVPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
                + + P   +      G      + K++ P  +    + K  + PL+TH   F   
Sbjct: 296 PDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE-- 353

Query: 269 EVEEAFE 275
           ++ E F+
Sbjct: 354 KINEGFD 360

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  139 bits (353), Expect = 4e-39
 Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 43/307 (14%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +++GHE  GV+E +G+ V  + PGD+V       C  C  CK    N C +    A    
Sbjct: 64  VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123

Query: 59  -------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC 100
                        P++      +     V       K+     LE   +    + G  A 
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAA 183

Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
              A + P +   + G G +G   ++  +A GA RI+ V     +   A E+GA   +  
Sbjct: 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL-- 241

Query: 160 STNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEM 217
             N +D  + + E I +    G+D + +CAG  +TM  AL +T  G G   ++G+     
Sbjct: 242 --NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299

Query: 218 TVPLTPAAVREVDVVGVFRYKNTW---------PLCLELLRSGKIDVKPLVTHRFGFSQK 268
            +PL P     + ++     K +             ++     KI+V  LV+ +      
Sbjct: 300 RLPLDP-----LLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLD-- 352

Query: 269 EVEEAFE 275
           ++ +AFE
Sbjct: 353 QINKAFE 359

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  135 bits (341), Expect = 2e-37
 Identities = 76/311 (24%), Positives = 122/311 (39%), Gaps = 40/311 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
           +V+GHE AG++E VG  V    PG++V       C  C  C+  + N C +     +P  
Sbjct: 64  VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDV 123

Query: 59  -------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-- 98
                         V       + +   V       K+  +  L+   +   L  GV   
Sbjct: 124 MSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCL---LGCGVSTG 180

Query: 99  ---ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 155
              A   A + P +   + G G +GL  ++   + GA RI+ VD++  +   AK  GA +
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240

Query: 156 IVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG 213
            V    N  D +E + + + K    G+D S +C G    M  AL +   G G   LVG  
Sbjct: 241 FV----NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT 296

Query: 214 HHEM--TVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 269
                 T P+   A R     + G F+ K+  P  ++     K+ +   +THR       
Sbjct: 297 DLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLE--S 354

Query: 270 VEEAFETSARG 280
           V +A +    G
Sbjct: 355 VNDAIDLMKHG 365

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  129 bits (326), Expect = 2e-35
 Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 30/246 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFF 55
            + GHE  G +  VGS V  +  GDRV    G+     +C  C+HC  G   LC + +  
Sbjct: 59  FIPGHEGVGYVSAVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQ-N 113

Query: 56  ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGV---HACRRANIGPETN 110
               V+G     VV   +    LPD V   E A  +C     GV      +  +  P   
Sbjct: 114 TGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQW 169

Query: 111 VLIMGAGPIGLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 168
           V+I G G  GL  +    ARA G  R+  VD+DD +L++A+ +GA+  V  + +  D A 
Sbjct: 170 VVISGIG--GLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAV-NARD-TDPAA 224

Query: 169 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 228
               +QK +G G       A   K  S A+G    GG + L G+   +   P+    ++ 
Sbjct: 225 W---LQKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKG 280

Query: 229 VDVVGV 234
           + + G 
Sbjct: 281 ITIRGS 286

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  127 bits (322), Expect = 7e-35
 Identities = 81/281 (28%), Positives = 123/281 (43%), Gaps = 18/281 (6%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V+G + +GV++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       
Sbjct: 59  HVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR- 117

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--HA-CRRANIGPETNVLIMGA- 116
           HG+ A  VV P       P N+S EE A   PL+          +  + P  +VL+M A 
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPLTFLTAWQMVVDKLGVRPGDDVLVMAAG 176

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
             + +  +  A+ FGA  I     +D +L  AK +GAD  V  +    D  +EV ++   
Sbjct: 177 SGVSVAAIQIAKLFGARVIATAGSED-KLRRAKALGADETVNYTH--PDWPKEVRRLTG- 232

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF 235
            G G D   D  G        + AT  GG++ + G    +E T+P      R++ ++G  
Sbjct: 233 -GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGST 290

Query: 236 -RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
              K+     L  +  GK+  KP+V            E   
Sbjct: 291 MASKSRLFPILRFVEEGKL--KPVVGQVLPLE--AAAEGHR 327

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  128 bits (322), Expect = 3e-34
 Identities = 59/297 (19%), Positives = 107/297 (36%), Gaps = 31/297 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V+G +C+GV+ + G  V+   PGD V + P       +    G   L  E + +     
Sbjct: 111 HVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEPATHGDGMLGTEQRAWGFETN 169

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----VHACRRANIGPETNVLIMG 115
            G LA   V  A      P +++ EE A   PL  G     + + R A +     VLI G
Sbjct: 170 FGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRGAQMKQGDIVLIWG 228

Query: 116 A-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV-------------KVST 161
           A G +G   +   +  G   + +V     + +  + +G D ++                 
Sbjct: 229 ASGGLGSYAIQFVKNGGGIPVAVVSSAQ-KEAAVRALGCDLVINRAELGITDDIADDPRR 287

Query: 162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVP 220
            ++   +  + + +  G   D+ F+  G   T   ++     GG V   G    +  T  
Sbjct: 288 VVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCGSSSGYLHTFD 346

Query: 221 LTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
                ++   +VG     ++        L  SG +   P ++  +  +  E  EA  
Sbjct: 347 NRYLWMKLKKIVGSHGANHEEQQAT-NRLFESGAV--VPAMSAVYPLA--EAAEACR 398

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  125 bits (316), Expect = 6e-34
 Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 26/243 (10%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFF 55
           ++ GHE  G++E+VG  V  L  GDRV    GI     +C  CD+C  G+  LC   K  
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRV----GIPWLYSACGHCDYCLSGQETLCEHQK-N 111

Query: 56  ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGV---HACRRANIGPETN 110
           A   V G  A      AD   K+PDN+S EE A   C     GV    A +     P   
Sbjct: 112 AGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEW 167

Query: 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
           V I G G +G V +  A+A G   +V VD+ D +L +AKE+GAD +V      +D A+  
Sbjct: 168 VAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV-NPLK-EDAAKF- 223

Query: 171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 230
             +++ +G G+  +   A       +A  +   GG   LVG+   EM +P+    +  + 
Sbjct: 224 --MKEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIK 280

Query: 231 VVG 233
           ++G
Sbjct: 281 IIG 283

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  124 bits (314), Expect = 1e-33
 Identities = 65/285 (22%), Positives = 111/285 (38%), Gaps = 22/285 (7%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V   + +GV+E VG  V    PGDRV                GR                
Sbjct: 86  VPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGR----TPAYETLGGAHP 141

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HA-CRRANIGPETNVLIMGAG 117
           G L+  VV P       P ++   E +   P   G+    A   + ++     V++ G G
Sbjct: 142 GVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEKGHLRAGDRVVVQGTG 199

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            + L  +  A+A GA  IV     + +L  A  +GAD+ +      +D  E V  +    
Sbjct: 200 GVALFGLQIAKATGAEVIVTSSSRE-KLDRAFALGADHGINRLE--EDWVERVYALTG-- 254

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF- 235
             G D   + AG    +  +L A    G++ ++G +   E++ P+ P  ++   V G+  
Sbjct: 255 DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISV 313

Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
            ++      +  +    +  KP++  R+ F+  EV EA     RG
Sbjct: 314 GHRRALEDLVGAVDRLGL--KPVIDMRYKFT--EVPEALAHLDRG 354

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  123 bits (310), Expect = 2e-32
 Identities = 60/299 (20%), Positives = 104/299 (34%), Gaps = 37/299 (12%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           VIG + AGV+ + G  V     GD V      S             L PE + +      
Sbjct: 120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNF 178

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----VHACRRANIGPETNVLIMGA 116
           G LA   +  ++     PD++S EE A    L        + +   A +    NVLI GA
Sbjct: 179 GGLAEIALVKSNQLMPKPDHLSWEEAA-APGLVNSTAYRQLVSRNGAGMKQGDNVLIWGA 237

Query: 117 -GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIV---------------KV 159
            G +G      A A GA    I  V    +  + + +GA+ I+               + 
Sbjct: 238 SGGLGSYATQFALAGGA--NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQD 295

Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMT 218
               +   + + ++    G  ID+ F+  G  +T   ++  T  GG +        +   
Sbjct: 296 PKEWKRFGKRIRELTG--GEDIDIVFEHPG-RETFGASVFVTRKGGTITTCASTSGYMHE 352

Query: 219 VPLTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
                  +    ++G     Y+  W     L+  G+I   P ++  +     +  +A  
Sbjct: 353 YDNRYLWMSLKRIIGSHFANYREAWEA-NRLIAKGRI--HPTLSKVYSLE--DTGQAAY 406

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  120 bits (303), Expect = 5e-32
 Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 30/247 (12%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFF 55
           +V GHE AGV+  +G  VK    GD      GI     SC  C++C+ G  + CP     
Sbjct: 62  LVGGHEGAGVVVGMGENVKGWKIGDYA----GIKWLNGSCMACEYCELGNESNCPHAD-L 116

Query: 56  ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGV---HACRRANIGPETN 110
           +     GS        A     +P    L + A  +C     G+    A + AN+     
Sbjct: 117 SGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILC----AGITVYKALKSANLMAGHW 172

Query: 111 VLIMGAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 167
           V I GA   GL ++ A   A+A G  R++ +D  + +  + + IG +  +   T  +DI 
Sbjct: 173 VAISGAAG-GLGSL-AVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDIV 228

Query: 168 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAV 226
             V    KA   G     + +     +  +     A G   LVGM    +    +    V
Sbjct: 229 GAV---LKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVV 285

Query: 227 REVDVVG 233
           + + +VG
Sbjct: 286 KSISIVG 292

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  112 bits (283), Expect = 3e-29
 Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 54/307 (17%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G+E    +  VGS V  L PGD V                                  
Sbjct: 87  VGGNEGVAQVVAVGSNVTGLKPGDWVI---------------------------PANAGL 119

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-GP 118
           G+   + V   +   ++P ++ L+  A     P +          + P  +V+   +   
Sbjct: 120 GTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSG 179

Query: 119 IGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
           +G   +  A A G   I +V             K +GA++++          E     + 
Sbjct: 180 VGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE--LRRPEMKNFFKD 237

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 234
                  ++ +C G  K+ +  L     GG +   G M    +   ++    +++ + G 
Sbjct: 238 --MPQPRLALNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGF 294

Query: 235 F-----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 283
           +           ++K       +L+R G++        +      + + A E S +   +
Sbjct: 295 WLSQWKKDHSPDQFKELILTLCDLIRRGQL--TAPACSQVPLQ--DYQSALEASMKPFIS 350

Query: 284 IKVMFNL 290
            K +  +
Sbjct: 351 SKQILTM 357

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  104 bits (260), Expect = 8e-26
 Identities = 47/321 (14%), Positives = 95/321 (29%), Gaps = 67/321 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
             G+E    + KVGS V +L  GD V                             +    
Sbjct: 75  PCGNEGLFEVIKVGSNVSSLEAGDWVI---------------------------PSHVNF 107

Query: 62  GSLANQVVHPADLCFKL-----------PDNVSLEEGAMCEPLSV----GVHAC-RRANI 105
           G+     +   D   KL           P+ +++ +GA    +SV              +
Sbjct: 108 GTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGAT---ISVNPLTAYLMLTHYVKL 164

Query: 106 GPETNVLIMGA--GPIGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVS 160
            P  +  I       +G       +      I ++      D  ++  KE+GA  ++   
Sbjct: 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITED 224

Query: 161 T-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMT 218
             N ++    +++  K  G    ++ +C G  K+ +         G +   G M    +T
Sbjct: 225 QNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVT 283

Query: 219 VPLTPAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ- 267
           +P +    +     G +             +T    +     GK+      +    +   
Sbjct: 284 IPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL--TDAKSIETLYDGT 341

Query: 268 KEVEEAFETSARGGTAIKVMF 288
           K + E ++         K + 
Sbjct: 342 KPLHELYQDGVANSKDGKQLI 362

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 95.0 bits (237), Expect = 9e-23
 Identities = 63/302 (20%), Positives = 105/302 (34%), Gaps = 59/302 (19%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G E AGV+     E   + PGDRV                                  
Sbjct: 81  VPGIETAGVVRSAP-EGSGIKPGDRVMAFNF----------------------------I 111

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-VHAC--RRANIGPETNVLIMGA-G 117
           G  A +V          P  +   E       +   ++    RR  +     VL++GA G
Sbjct: 112 GGYAERVAVAPSNILPTPPQLDDAEAV-ALIANYHTMYFAYARRGQLRAGETVLVLGAAG 170

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            IG   +  A+  GA  I +V+         K +GAD ++ +    +  A+ V +     
Sbjct: 171 GIGTAAIQIAKGMGAKVIAVVNRTA-ATEFVKSVGADIVLPLE---EGWAKAVREATG-- 224

Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVF 235
           G G+D+  D  G       A+    + G++ +VG   G    T+ +    +R   ++GV 
Sbjct: 225 GAGVDMVVDPIG-GPAFDDAVRTLASEGRLLVVGFAAGGIP-TIKVNRLLLRNASLIGVA 282

Query: 236 ----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 285
                         T     +L+  G   ++P V+ R   S  E  +A +  A G    K
Sbjct: 283 WGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLS--EGRQALQDFADGKVYGK 337

Query: 286 VM 287
           ++
Sbjct: 338 MV 339

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 60/301 (19%), Positives = 105/301 (34%), Gaps = 64/301 (21%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
             G + AGVIE VG        GDRV                   +              
Sbjct: 90  TPGSDVAGVIEAVGDNASAFKKGDRVF-----------------TSSTI----------S 122

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-VHAC--RRANIGPETNVLIMGA-G 117
           G  A   +      +KLP+ +  ++GA    +     +      A +    +VL+ GA G
Sbjct: 123 GGYAEYALAADHTVYKLPEKLDFKQGA-AIGIPYFTAYRALIHSACVKAGESVLVHGASG 181

Query: 118 PIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
            +GL     ARA+G    ++     +    +  + GA  +        +  ++++K    
Sbjct: 182 GVGLAACQIARAYGL--KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG- 236

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGV 234
              GID+  +    N  +S  L     GG+V +VG      T+ + P     +E  ++GV
Sbjct: 237 -EKGIDIIIEMLA-NVNLSKDLSLLSHGGRVIVVGSRG---TIEINPRDTMAKESSIIGV 291

Query: 235 FRYKNT-----------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 283
             + +T                  +  G +  KP++  ++     +V EA E    G  A
Sbjct: 292 TLFSSTKEEFQQYAAALQA----GMEIGWL--KPVIGSQYPLE--KVAEAHENIIHGSGA 343

Query: 284 I 284
            
Sbjct: 344 T 344

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 42/245 (17%)

Query: 1   MVIGHECAGVIEKVGSEVKTLV-PGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF 54
           +V+GHE  G + K+G +  + +  G RV    G+     SC  CD CK      C +   
Sbjct: 64  LVVGHEIVGKVVKLGPKSNSGLKVGQRV----GVGAQVFSCLECDRCKNDNEPYCTKFVT 119

Query: 55  -FATPPVHGSL-----ANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHAC 100
            ++ P   G +     AN V         +P+N+     A  +C       PL       
Sbjct: 120 TYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL------- 172

Query: 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160
            R   GP   V I+G G IG +  L ++A GA   VI      R   A ++GAD+ +  +
Sbjct: 173 VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYI-AT 230

Query: 161 TNLQDIAEEVEKIQKAMGTGIDVSFDC--AGLNKTMSTALGATCAGGKVCLVGMGHHEMT 218
                  EE +  +K   T  D+   C  +  +   +    A   GG++  + +      
Sbjct: 231 L------EEGDWGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEM 283

Query: 219 VPLTP 223
           + L P
Sbjct: 284 LSLKP 288

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 50/297 (16%), Positives = 87/297 (29%), Gaps = 52/297 (17%)

Query: 2   VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             G E  G I   G E     + G RVA   G+S                          
Sbjct: 82  PAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLS-------------------------N 116

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-G 117
            GS A   V  A  C  L D V  E+GA  +  PL+  +          E   ++     
Sbjct: 117 WGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFVMTAGAS 175

Query: 118 PIGL-VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
            +   +  L A+  G   IV V  D+ ++++ K+IGA +++       D    + ++ K 
Sbjct: 176 QLCKLIIGL-AKEEGFRPIVTVRRDE-QIALLKDIGAAHVLNEKA--PDFEATLREVMK- 230

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGV 234
                 +  D        S    A     +  + G       +         +   + G 
Sbjct: 231 -AEQPRIFLDAVT-GPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGF 288

Query: 235 F--RYKNTWPLCL--------ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 281
           +   +   +            +    G+      VT     ++       E +   G
Sbjct: 289 WLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAWVPAELTKPNG 343

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 53/294 (18%), Positives = 93/294 (31%), Gaps = 54/294 (18%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             +G++ +G + ++GS+V  +  GD+V    G                         P  
Sbjct: 69  SGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGF------------------------PDH 104

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGAG 117
               A  V    D   +  + +S  + A   P   G+    A  +A +     VLI    
Sbjct: 105 PCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQAEVKQGDVVLIHAGA 162

Query: 118 PIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
             G V  LA   A+  G    VI        +  K +GA+  +      +D    +    
Sbjct: 163 --GGVGHLAIQLAKQKGT--TVITTASKRNHAFLKALGAEQCINYHE--EDFLLAI---- 212

Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 234
               T +D   D  G       ++      G   +V +        +  A  +     G+
Sbjct: 213 ---STPVDAVIDLVG-GDVGIQSIDCLKETGC--IVSVPTITAGRVIEVAKQKHRRAFGL 266

Query: 235 FRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 286
            +  N   L    +L+   K+  +  ++  F  S  E   A E    G    K+
Sbjct: 267 LKQFNIEELHYLGKLVSEDKL--RIEISRIFQLS--EAVTAHELLETGHVRGKL 316

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 89.9 bits (224), Expect = 7e-21
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 40/243 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--- 52
           +V GHE  G + +VGS+VK +  GD+V    G+     +C  C+ C     N CP+M   
Sbjct: 72  LVPGHEIVGEVTEVGSKVKKVNVGDKV----GVGCLVGACHSCESCANDLENYCPKMILT 127

Query: 53  ---KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACR 101
               +      +G  +N +V       + PDN+ L+ GA  +C       PL       +
Sbjct: 128 YASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPL-------K 180

Query: 102 RANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160
              +  P  ++ I+G G +G V +  A+AFG+   VI      +    K  GAD+ + VS
Sbjct: 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL-VS 239

Query: 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 220
            +        E++Q A GT +D   D       +    G   + GK+ LVG     + +P
Sbjct: 240 RD-------QEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELP 291

Query: 221 LTP 223
              
Sbjct: 292 AFS 294

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 86.5 bits (215), Expect = 8e-20
 Identities = 52/214 (24%), Positives = 83/214 (38%), Gaps = 36/214 (16%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
            +G E AG++ KVGS VK +  GDRV                           +A   + 
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKAGDRVV--------------------------YAQSAL- 92

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGP 118
           G+ ++     AD    LP  +S E+ A    + L+V     +   I P+   L    AG 
Sbjct: 93  GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGG 152

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +GL+    A+A GA  I  V     +   A + GA  ++      +D+ E +++I    G
Sbjct: 153 VGLIACQWAKALGAKLIGTVGTAQ-KAQSALKAGAWQVINYRE--EDLVERLKEITG--G 207

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
             + V +D  G   T   +L      G +   G 
Sbjct: 208 KKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGN 240

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 86.1 bits (214), Expect = 1e-19
 Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 40/253 (15%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--- 52
           MV GHE  G + +VGS+V     GD V    G+      C  C  C+      CP+    
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIV----GVGCLVGCCGGCSPCERDLEQYCPKKIWS 120

Query: 53  ---KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACR 101
               +    P  G  A   V       K+P+ +++E+ A  +C       PL        
Sbjct: 121 YNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------S 173

Query: 102 RANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160
              +  P     I+G G +G + +  A+A G    VI   +  R    +++GAD+ V + 
Sbjct: 174 HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV-IG 232

Query: 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 220
           ++         K+ +   + +D   D   ++  +   L      GK+ L+G+ ++ +   
Sbjct: 233 SD-------QAKMSELADS-LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFL 284

Query: 221 LTPAAVREVDVVG 233
                +    + G
Sbjct: 285 TPLLMLGRKVITG 297

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 47/292 (16%), Positives = 95/292 (32%), Gaps = 59/292 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           + G+E  G++E VG+ V   + G RV    G                             
Sbjct: 65  IPGYEGVGIVENVGAFVSRELIGKRVLPLRG----------------------------E 96

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-GP 118
           G+    V   AD    +PD++     A     PL+  V      N+     +L+      
Sbjct: 97  GTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSA 156

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           IG +    ++      I +   +         +GA  ++  ST    + E V ++    G
Sbjct: 157 IGHLFAQLSQILNFRLIAVTRNNK-HTEELLRLGAAYVIDTST--APLYETVMELTN--G 211

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFR 236
            G D + D  G     +    +    G    +G+  G   + V       +      +F 
Sbjct: 212 IGADAAIDSIG-GPDGNELAFSLRPNGHFLTIGLLSG---IQVNWAEIVTKAKVHANIFH 267

Query: 237 ------------YKNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFE 275
                       ++ T+   + L+ + ++  + + V   +  +  +V+ A +
Sbjct: 268 LRHWNDEVSPYKWQETFRHLIRLVENEQL--RFMKVHSTYELA--DVKAAVD 315

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 53/246 (21%), Positives = 87/246 (35%), Gaps = 47/246 (19%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--- 52
           M+ GHE AG+I++VG  VK    GD V    G+     SC  C  CK  +   C ++   
Sbjct: 60  MIPGHEIAGIIKEVGKGVKKFKIGDVV----GVGCFVNSCKACKPCKEHQEQFCTKVVFT 115

Query: 53  -----KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHA 99
                 F    P  G  +N +V   +    +  N  LE+ A  +C       PL      
Sbjct: 116 YDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL------ 169

Query: 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
            + + +   T V + G G +G + +  A A GA   V    +  +   A  +G  +    
Sbjct: 170 -KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALSMGVKHFY-T 226

Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV 219
                         ++     +D        +  +   L      G + LVG+   E+  
Sbjct: 227 DP------------KQCKEE-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAP 273

Query: 220 PLTPAA 225
            L+   
Sbjct: 274 VLSVFD 279

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 36/214 (16%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
            +G E AGV+E VG EV     GDRVA                          + T P+ 
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKVGDRVA--------------------------YGTGPL- 92

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGP 118
           G+ +   V P     KL D+VS E+ A  M + L+V     +   + P   +L    AG 
Sbjct: 93  GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGG 152

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G +    A+A GA  I  V   + + + AK +GA   +  S   +D+A+ V ++    G
Sbjct: 153 VGSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--G 207

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
               V +D  G   T  T+L +    G V   G 
Sbjct: 208 KKCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFGN 240

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 85.8 bits (212), Expect = 3e-19
 Identities = 42/315 (13%), Positives = 88/315 (27%), Gaps = 60/315 (19%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           M +G+E AGV+ + GS         +     G + +                        
Sbjct: 92  MPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMY------------------------ 127

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSVGVHACRRANIGPETNVLIMG-AG 117
               +     PAD C  LP+  +  +GA     PL+  +       +   + ++    A 
Sbjct: 128 ----SQYRCIPADQCLVLPEGATPADGASSFVNPLTA-LGMVETMRLEGHSALVHTAAAS 182

Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
            +G +        G   + IV   + +  + K  GA ++   +       +++ +    +
Sbjct: 183 NLGQMLNQICLKDGIKLVNIVRKQE-QADLLKAQGAVHV--CNAASPTFMQDLTEA--LV 237

Query: 178 GTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGMGHHEMT------------VPLT 222
            TG  ++FD  G   L   + T + A            G                     
Sbjct: 238 STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFN 297

Query: 223 PAAVREVDVVGVFRY--------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
                   + G   +        +    L   ++   K       +     ++    +  
Sbjct: 298 RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKTTFASHYSKEISLAEVLDLDMI 357

Query: 275 ETSARGGTAIKVMFN 289
               +  T  K + N
Sbjct: 358 AVYNKRATGEKYLIN 372

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 85.4 bits (212), Expect = 3e-19
 Identities = 56/312 (17%), Positives = 88/312 (28%), Gaps = 85/312 (27%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           V G EC+G++E +G  VK    GDRV A                                
Sbjct: 63  VPGFECSGIVEALGDSVKGYEIGDRVMAFVNY---------------------------- 94

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-VHAC--RRANIGPETNVLI-MGA 116
             + A  V  P +  +K+PD++S  E A   P++    +      AN+    +VL+    
Sbjct: 95  -NAWAEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLFEVANLREGMSVLVHSAG 152

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
           G +G               V      ++    K+       +      D  +EV++I   
Sbjct: 153 GGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVTHLFDRN----ADYVQEVKRIS-- 205

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-----------------GHHEMTV 219
              G+D+  DC          L      G   L G                        V
Sbjct: 206 -AEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKV 263

Query: 220 PLTPAAVREVDVVGVF----------------RYKNTWPLCLELLRSGKIDVKPLVTHRF 263
                      + G                    +        L    KI  KP+V   +
Sbjct: 264 NPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIG----LYNQKKI--KPVVDSLW 317

Query: 264 GFSQKEVEEAFE 275
                EV+EA +
Sbjct: 318 ALE--EVKEAMQ 327

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 84.2 bits (209), Expect = 6e-19
 Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 40/217 (18%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G E A V+E+VG  V     G+RV                              PP+ 
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERVC--------------------------TCLPPL- 95

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPETNVLIM-GA 116
           G+ + + ++PA+   K+P ++ L++  +   +  G+ A     +   + P   VLI   A
Sbjct: 96  GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAA 155

Query: 117 GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
           G +G + +  AR  GA   VI  V  + +   A+++G  + +  ST  QD AE V +I  
Sbjct: 156 GGMGHIMVPWARHLGA--TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG 211

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
             G G+DV +D  G   T+  +L      G     G 
Sbjct: 212 --GKGVDVVYDSIG-KDTLQKSLDCLRPRGMCAAYGH 245

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 83.8 bits (208), Expect = 9e-19
 Identities = 65/306 (21%), Positives = 100/306 (32%), Gaps = 63/306 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           ++G E +G I  VG  V     GD+V          C    GG Y               
Sbjct: 88  ILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAY--------------- 122

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHA-CRRANIGPETNVLIM-GAGP 118
              A   + PA      P      + A + E          + A +    +VLI  G   
Sbjct: 123 ---AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSG 179

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           IG   +  ARAFGA           +    + +GA   +   +  +D A  ++      G
Sbjct: 180 IGTTAIQLARAFGAEVYATAGSTG-KCEACERLGAKRGINYRS--EDFAAVIKAET---G 233

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVF- 235
            G+D+  D  G        + +    G + ++    G     V L+P  V+ + V G   
Sbjct: 234 QGVDIILDMIG-AAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTM 292

Query: 236 -----RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 281
                  K           WP    LL +G +   P++   F F   +V +A      G 
Sbjct: 293 RPRTAEEKRAIRDDLLSEVWP----LLEAGTV--APVIHKVFAFE--DVADAHRLLEEGS 344

Query: 282 TAIKVM 287
              KVM
Sbjct: 345 HVGKVM 350

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 52/233 (22%), Positives = 80/233 (34%), Gaps = 42/233 (18%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF- 54
            V GHE  G +  VG +V+   PGD V    G+     SC  C+ C+ G  N C  M   
Sbjct: 78  CVPGHEIVGRVVAVGDQVEKYAPGDLV----GVGCIVDSCKHCEECEDGLENYCDHMTGT 133

Query: 55  ------FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MC------EPLSVGVHA 99
                        G  + Q+V       ++             +C       PL      
Sbjct: 134 YNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL------ 187

Query: 100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
            R    GP   V ++G G +G + +  A A GA  +     +  R   AK +GAD +V  
Sbjct: 188 -RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVV-N 244

Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
           S N        +++   + +  D   +       +          G + LVG 
Sbjct: 245 SRN-------ADEMAAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 82.8 bits (205), Expect = 3e-18
 Identities = 54/321 (16%), Positives = 96/321 (29%), Gaps = 78/321 (24%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
            +G + AG +  VGS+V  +  GDRV                               P  
Sbjct: 65  FLGTDYAGTVVAVGSDVTHIQVGDRV----------YGAQNEMCPR----------TPDQ 104

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV---------------GVHACRRANIG 106
           G+ +   V    +  K+P  +S E+ A   P  +                  A +     
Sbjct: 105 GAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPSADQPPTHS 163

Query: 107 PETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 165
               VL+ G +     VTM   R  G   I I     +   +AK  GA+ +        +
Sbjct: 164 KPVYVLVYGGSTATATVTMQMLRLSGY--IPIATCSPHNFDLAKSRGAEEV--FDYRAPN 219

Query: 166 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVPLTPA 224
           +    + I+      +  + DC    ++ +    A   AGG    +         P   A
Sbjct: 220 L---AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL------NPFPEHAA 270

Query: 225 AVREVDVVGVFRY-------------------------KNTWPLCLELLRSGKIDVKPLV 259
             + V                                 ++ W +  +L+  G++   PL 
Sbjct: 271 TRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLR 330

Query: 260 THRFGFSQKEVEEAFETSARG 280
             + GF    +++  E   +G
Sbjct: 331 VVQGGFDH--IKQGMELVRKG 349

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 80.7 bits (200), Expect = 1e-17
 Identities = 65/293 (22%), Positives = 106/293 (36%), Gaps = 61/293 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++G + AG +  VG EV +   GD V  L  G+                          +
Sbjct: 66  ILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGV------------------------GGL 101

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETNVLIM-G 115
            G+ A      A L    P  +++ + +   PL V + A      RA +     VLI  G
Sbjct: 102 QGTHAQFAAVDARLLASKPAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGG 159

Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
            G +G V +  A A GA   V        L   +++GA  I       ++  +   +   
Sbjct: 160 GGGVGHVAIQIALARGA--RVFATARGSDLEYVRDLGATPID----ASREPEDYAAEH-- 211

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGV 234
             G G D+ +D  G    +  +  A    G  V  +G G H+    L P + ++    GV
Sbjct: 212 TAGQGFDLVYDTLG-GPVLDASFSAVKRFGHVVSCLGWGTHK----LAPLSFKQATYSGV 266

Query: 235 F----RYKNTWPL--------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
           F       N               L+++GK+   P +  R  FS  E+  A++
Sbjct: 267 FTLHTLLANEGLAHFGEMLREADALVQTGKL--APRLDPRT-FSIAEIGSAYD 316

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 80.3 bits (199), Expect = 1e-17
 Identities = 56/308 (18%), Positives = 102/308 (33%), Gaps = 74/308 (24%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V G + AGVI KVG++V + + G RV                           + T    
Sbjct: 61  VPGVDGAGVIVKVGAKVDSKMLGRRV--------------------------AYHTSLKR 94

Query: 62  -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGAG 117
            GS A   V   D    LPDN+S E  A   P    +    A  +  +  +  VLI+G G
Sbjct: 95  HGSFAEFTVLNTDRVMTLPDNLSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIVGFG 152

Query: 118 PIGLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
            +    +L       G   +V +       ++A + G  ++       ++ ++  +    
Sbjct: 153 AVN--NLLTQMLNNAGY--VVDLVSASLSQALAAKRGVRHLY------REPSQVTQ---- 198

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV--------------GMGHHEMTVPL 221
                    FD    ++  +  + +  A G +  +               + +HE+ +  
Sbjct: 199 ----KYFAIFDAVN-SQNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGA 253

Query: 222 TPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 281
                   D   + +        L L+  GK+  +      F F Q  + EA + S +  
Sbjct: 254 LHDFGDRQDWQILMQQGEA---LLTLIAQGKM--EIAAPDIFRFEQ--MIEALDHSEQTK 306

Query: 282 TAIKVMFN 289
               +  N
Sbjct: 307 LKTVLTLN 314

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 79.4 bits (196), Expect = 4e-17
 Identities = 61/319 (19%), Positives = 103/319 (32%), Gaps = 77/319 (24%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +G + +GV+ + G +VK   PGD V                          + A PP 
Sbjct: 96  LTLGRDVSGVVMECGLDVKYFKPGDEV--------------------------WAAVPPW 129

Query: 61  H-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--------HACRRANIGPETNV 111
             G+L+  VV   +     P +++  + A   P  V +                     V
Sbjct: 130 KQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VALTAWSAINKVGGLNDKNCTGKRV 187

Query: 112 LIMGAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 168
           LI+GA   G V   A    +A+ A   V          + +++GAD+++   +    + E
Sbjct: 188 LILGAS--GGVGTFAIQVMKAWDA--HVTAVCSQDASELVRKLGADDVIDYKS--GSVEE 241

Query: 169 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE------------ 216
           +++          D   D  G   T + A            V +                
Sbjct: 242 QLKS-----LKPFDFILDNVG-GSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADG 295

Query: 217 -------MTVPLTPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQ 267
                  +         + V     F   +   L    EL+ +GKI  +P++   F FS 
Sbjct: 296 MLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPFS- 352

Query: 268 KEVEEAFETSARGGTAIKV 286
            +V EAF    RG    K 
Sbjct: 353 -KVPEAFLKVERGHARGKT 370

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 50/217 (23%), Positives = 78/217 (35%), Gaps = 40/217 (18%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           V+G E +G +   G  V     GD+VA                          + +    
Sbjct: 66  VLGREASGTVVAKGKGVTNFEVGDQVA--------------------------YISNSTF 99

Query: 62  GSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGVHACRRANIGPETNVLIMG- 115
              +   +       KLP   S EE       + + L+         ++     VL+   
Sbjct: 100 AQYS--KISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAA 157

Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
           AG +GL+     +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K   
Sbjct: 158 AGGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN 214

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
             G G+D SFD  G   T   +L A    G     G 
Sbjct: 215 --GKGVDASFDSVG-KDTFEISLAALKRKGVFVSFGN 248

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 76.0 bits (188), Expect = 3e-16
 Identities = 67/303 (22%), Positives = 103/303 (33%), Gaps = 78/303 (25%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           + G E  GV           V G R A                           A  P  
Sbjct: 58  IPGMEVVGV-----------VEGRRYA---------------------------ALVP-Q 78

Query: 62  GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--VHACRRANIGPETNVLIMG-AGP 118
           G LA +V  P      LP+ +S EE A   P+S      A +RA   P   VL+   AG 
Sbjct: 79  GGLAERVAVPKGALLPLPEGLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGA 137

Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
           +G   +  ARA G   +      + +L++   +GA+            AE  E+ +    
Sbjct: 138 LGTAAVQVARAMGLRVLAAASRPE-KLALPLALGAEEAA-------TYAEVPERAKA--W 187

Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF-R 236
            G+D+  +  G  K +  +LG    GG++  +G        +P      R + V+G +  
Sbjct: 188 GGLDLVLEVRG--KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT 245

Query: 237 Y------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 284
                            P         ++  +P+V   F F+  E E AF      G   
Sbjct: 246 PLLREGALVEEALGFLLPRL-----GREL--RPVVGPVFPFA--EAEAAFRALLDRGHTG 296

Query: 285 KVM 287
           KV+
Sbjct: 297 KVV 299

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 51/309 (16%), Positives = 99/309 (32%), Gaps = 62/309 (20%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
           VIG++ AG++  VG +V    PGD V                          F+A   + 
Sbjct: 84  VIGYDAAGIVSAVGPDVTLFRPGDEV--------------------------FYAGSIIR 117

Query: 62  -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETN-----V 111
            G+ A   +    +  + P  +   E A   PL   + A      R ++          +
Sbjct: 118 PGTNAEFHLVDERIVGRKPKTLDWAEAA-ALPL-TSITAWEAFFDRLDVNKPVPGAAPAI 175

Query: 112 LIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
           LI+ GAG +G + +  AR      ++            K +GA +++  S   + +A EV
Sbjct: 176 LIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHS---KPLAAEV 232

Query: 171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL-VGMGHHEMTVPLTPAAVREV 229
             +           F     +K  +         G+ CL            +     + V
Sbjct: 233 AALG---LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS----AFDIMLFKRKAV 285

Query: 230 DVVGVFRYKNTWPLCLELLRSGKI-----------DVKPLVTHRFG-FSQKEVEEAFETS 277
            +     +        ++   G++            ++  +T+R    +   +++A    
Sbjct: 286 SIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALV 345

Query: 278 ARGGTAIKV 286
             G    KV
Sbjct: 346 ESGTARGKV 354

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 51/308 (16%), Positives = 97/308 (31%), Gaps = 62/308 (20%)

Query: 2   VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++G E +G + ++G   +     GD                 GG                
Sbjct: 82  ILGLEASGHVAELGPGCQGHWKIGDTA----------MALLPGGGQ-------------- 117

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHAC--RRANIGPETNVLIM-GA 116
               A  V  P  L   +P+ ++L + A + E              N+     VLI  G 
Sbjct: 118 ----AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT-AFQLLHLVGNVQAGDYVLIHAGL 172

Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
             +G   +   R  GA  +V       +L +A+++GA          +D +E   K  K 
Sbjct: 173 SGVGTAAIQLTRMAGAIPLVTAGSQK-KLQMAEKLGAAAGFNYKK--EDFSEATLKFTK- 228

Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGV 234
            G G+++  DC G        +      G+  L G+  G        +    +   ++  
Sbjct: 229 -GAGVNLILDCIG-GSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITS 286

Query: 235 F------RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR 279
                  +YK            P         ++   P++   +  +  E++EA +    
Sbjct: 287 LLRSRDNKYKQMLVNAFTEQILPH-FSTEGPQRL--LPVLDRIYPVT--EIQEAHKYMEA 341

Query: 280 GGTAIKVM 287
                K++
Sbjct: 342 NKNIGKIV 349

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 55/315 (17%), Positives = 103/315 (32%), Gaps = 73/315 (23%)

Query: 2   VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPV 60
           V+G +  GV+E VG+EV     GD V                          +++ +P  
Sbjct: 62  VLGFDAIGVVESVGNEVTMFNQGDIV--------------------------YYSGSPDQ 95

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHA----CRRANIGPETN----- 110
           +GS A   +    L  K P N+S E+  ++  PL  G+ A         I    N     
Sbjct: 96  NGSNAEYQLINERLVAKAPKNISAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGK 152

Query: 111 -VLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 168
            +LI+ GAG +G +    A+A+G   I     ++  +   K++GAD ++    +L     
Sbjct: 153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNE-TIEWTKKMGADIVLNHKESL----- 206

Query: 169 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL-VGMGHHEMTVPLTPAAVR 227
            + + +      +D  F     +      +      G +   V   +      L     +
Sbjct: 207 -LNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFEN---DQDLNALKPK 262

Query: 228 EVDVVGVFRYKNTWPLCL---------------ELLRSGKIDVKPLVTHRFG-FSQKEVE 271
            +     F +    PL                   +       +P  T      + + + 
Sbjct: 263 SLSFSHEFMF--ARPLNQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTTENIY 318

Query: 272 EAFETSARGGTAIKV 286
           +A +         K+
Sbjct: 319 QAHQILESNTMIGKL 333

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 54/294 (18%), Positives = 94/294 (31%), Gaps = 64/294 (21%)

Query: 3   IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
           +G E AGV+ + G  V  L PGDRV                                +  
Sbjct: 268 LGSEGAGVVVETGPGVTGLAPGDRVMG-----------------------------MIPK 298

Query: 63  SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV------HA-CRRANIGPETNVLI-M 114
           +     V    +  ++P   S    A     SV +      +A    A + P  ++L+  
Sbjct: 299 AFGPLAVADHRMVTRIPAGWSFARAA-----SVPIVFLTAYYALVDLAGLRPGESLLVHS 353

Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
            AG +G+  +  AR  GA        D ++   A E+  +++   S    D  ++     
Sbjct: 354 AAGGVGMAAIQLARHLGAEVYATASEDKWQ---AVELSREHLA-SSRTC-DFEQQFLGAT 408

Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG------HHEMTVPLTPAAVRE 228
              G G+DV  +     +    +L     GG    + +G        E+       + + 
Sbjct: 409 G--GRGVDVVLNSLA-GEFADASLRMLPRGG--RFLELGKTDVRDPVEVADAHPGVSYQA 463

Query: 229 VDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
            D V     R        +EL     +  +PL    +   Q    EA    ++ 
Sbjct: 464 FDTVEAGPQRIGEMLHELVELFEGRVL--EPLPVTAWDVRQ--APEALRHLSQA 513

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 47/314 (14%), Positives = 91/314 (28%), Gaps = 70/314 (22%)

Query: 2   VIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            IG E  G +  +G         G  VA                                
Sbjct: 86  DIGFEGIGEVVALGLSASARYTVGQAVAYMAP---------------------------- 117

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL---SVGVHACRRANIGP-ETNVLIMGA 116
            GS A   V PA +   +P     E   +        + +       +   +  VL+  A
Sbjct: 118 -GSFAEYTVVPASIATPVPSVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKK-VLVTAA 172

Query: 117 -GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
            G  G   M  ++      I     D+ + +  K +G D  +   T  + +   ++   +
Sbjct: 173 AGGTGQFAMQLSKKAKCHVIGTCSSDE-KSAFLKSLGCDRPINYKT--EPVGTVLK---Q 226

Query: 176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAA--------- 225
               G+DV ++  G       A+ A    G++ ++G    ++    L+P           
Sbjct: 227 EYPEGVDVVYESVG-GAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLL 285

Query: 226 VREVDVVG--VFRYKNTWPLCLE----LLRSGKIDVK------PLVTHRFGFSQKEVEEA 273
            +   V G  +  Y + +   +     +  SG +  +             G     +  A
Sbjct: 286 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLES--IFRA 343

Query: 274 FETSARGGTAIKVM 287
                 G    K++
Sbjct: 344 VNYMYMGKNTGKIV 357

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 47/245 (19%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V G + AGV+    S+      GD V      + +      G  +              
Sbjct: 62  FVPGIDLAGVVVS--SQHPRFREGDEVIA----TGYEI----GVTH-------------- 97

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPETNVLIMGA 116
            G  +       +    LP  ++L+E    G      ++ +H      + PE   +++  
Sbjct: 98  FGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTG 157

Query: 117 GP--IGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 171
               +G + +      G             DY     + +GA  ++          + + 
Sbjct: 158 ATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY----LRVLGAKEVL-------AREDVMA 206

Query: 172 KIQKAMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREV 229
           +  + +       + D  G  +T++T L     GG V + G+ G  E+   + P  +R V
Sbjct: 207 ERIRPLDKQRWAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGV 265

Query: 230 DVVGV 234
            ++G+
Sbjct: 266 SLLGI 270

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 45/244 (18%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWR--CDHCKGGRYNLCPEMKFFATP 58
           +++G + AG +    S       GD V      + +                        
Sbjct: 63  LILGIDAAGTVVS--SNDPRFAEGDEVIA----TSYELGVSR------------------ 98

Query: 59  PVHGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPE-TNVLI 113
              G L+     P D    LP N+SL+E    G      ++ VH   +  + PE  +VL+
Sbjct: 99  --DGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLV 156

Query: 114 MGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 172
            GA G +G + +      G   +     +       K++GA  ++          +  + 
Sbjct: 157 TGATGGVGGIAVSMLNKRGYDVVAST-GNREAADYLKQLGASEVI-------SREDVYDG 208

Query: 173 IQKAMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVD 230
             KA+       + D  G  K +++ L     GG V + G+ G  E+   + P  +R V 
Sbjct: 209 TLKALSKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVS 267

Query: 231 VVGV 234
           ++G+
Sbjct: 268 LLGI 271

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 53/309 (17%), Positives = 95/309 (30%), Gaps = 68/309 (22%)

Query: 2    VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
            + G                   G RV                        M         
Sbjct: 1588 IPGKWLTRDCMLGMEFSGRDASGRRV------------------------MGMVPA---- 1619

Query: 62   GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV------HA-CRRANIGPETNVLI- 113
              LA  V+      +++P   +LEE A     SV +      ++   R  + P  +VLI 
Sbjct: 1620 EGLATSVLLLQHATWEVPSTWTLEEAA-----SVPIVYTTAYYSLVVRGRMQPGESVLIH 1674

Query: 114  MGAGPIGLVTMLAARAFGAPRIVIVDVD---DYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
             G+G +G   +  A + G      V       Y  +   ++          N +D + E 
Sbjct: 1675 SGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFA----NSRDTSFEQ 1730

Query: 171  EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG--------HHEMTVPLT 222
              ++   G G+D+  +     + +  ++      G    + +G           M V L 
Sbjct: 1731 HVLRHTAGKGVDLVLNSLA-EEKLQASVRCLAQHG--RFLEIGKFDLSNNHALGMAVFLK 1787

Query: 223  PAAVREVDVVGVF-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 277
                  + +  +F      ++    L    ++ G   V+PL    F  +  +VE AF   
Sbjct: 1788 NVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGV--VQPLKCTVFPRT--KVEAAFRYM 1843

Query: 278  ARGGTAIKV 286
            A+G    KV
Sbjct: 1844 AQGKHIGKV 1852

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 41.7 bits (97), Expect = 2e-04
 Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNI 156
                    + +G GP+ L  +L +  +G  R+ +V+++     +++++    G D +
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV 174

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} Length = 480

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 110 NVLIMGAGPIGLVTM-LAAR--AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 166
             +I+G G +G   M L          ++ I+  +  ++ VA++ G    ++  T  Q+ 
Sbjct: 15  RFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITP-QNY 73

Query: 167 AEEVEKIQKAMGTGIDVSFD 186
            E +    +     IDVS  
Sbjct: 74  LEVIGSTLEENDFLIDVSIG 93

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 62/219 (28%)

Query: 79  PDNVSLEEGAMCEPLSVGVHACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIV 136
             NVS  +              R+A   + P  NVLI G    G  T +A          
Sbjct: 128 KYNVSRLQP---------YLKLRQALLELRPAKNVLIDGVLGSG-KTWVALDV------- 170

Query: 137 IVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMST 196
                 Y++    +     I  ++    +  E V ++ + +   ID ++  +  + + + 
Sbjct: 171 ---CLSYKVQCKMD---FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW-TSRSDHSSNI 223

Query: 197 ALGATCAGGKV-----------CLVGMGHHEMTVPLTPAAVREVDVVGVF---------- 235
            L       ++           CL+ + +           V+       F          
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLN-----------VQNAKAWNAFNLSCKILLTT 272

Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
           R+K       + L +       L  H    +  EV+   
Sbjct: 273 RFKQV----TDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	290
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.87
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.22
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.04
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.94
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.76
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.74
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.72
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.63
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.56
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.29
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.18
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.16
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.14
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.11
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.1
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.06
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.97
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.93
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.9
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.9
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.81
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.75
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.65
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.64
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.64
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.63
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.6
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.59
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.59
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.56
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.52
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.48
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.46
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.44
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.43
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.4
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.39
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.37
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.36
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.36
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.34
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.32
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.31
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.31
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.3
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.3
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.29
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.28
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.28
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.27
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.27
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.25
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.25
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.25
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.24
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.24
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.22
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.21
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.21
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.19
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.19
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.19
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.18
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.18
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.18
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.18
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.17
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.16
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.16
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.16
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.16
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.16
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.16
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.16
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.16
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.16
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.16
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.15
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.15
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.15
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.14
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.14
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.14
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.14
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.14
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.13
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.12
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.12
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.12
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.12
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.11
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.11
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.1
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.1
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.1
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.1
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.1
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.09
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.09
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.09
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.09
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.09
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.08
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.07
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.07
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.07
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.06
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.06
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.04
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.04
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.03
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.03
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.03
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.03
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.02
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.02
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.02
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.0
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.99
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.99
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.98
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.98
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.98
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.98
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.98
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.98
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.97
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.95
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.95
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.95
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.94
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.94
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.93
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.92
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.92
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.92
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.9
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.9
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.9
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.89
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.89
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.88
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.88
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.88
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.87
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.87
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.87
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.87
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.87
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.86
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.86
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.86
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.86
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.84
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.84
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.84
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.84
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.83
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.83
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.82
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.82
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.81
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.81
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.81
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.81
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.81
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.8
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.79
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.78
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.77
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.76
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.76
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.76
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.75
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.75
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.75
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.75
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.74
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.74
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.74
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.74
1spx_A	278	Short-chain reductase family member (5L265); paral	96.73
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.71
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.71
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.71
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.7
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.69
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.68
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.68
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.68
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.67
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.67
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.66
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.66
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.65
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.65
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.65
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.65
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.64
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.64
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.64
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.64
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.64
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.63
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.62
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.61
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.59
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.59
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.58
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.58
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.58
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.57
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.56
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.56
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.56
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.56
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.55
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.55
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.54
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.54
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.52
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.52
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.5
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.5
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.5
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.49
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.49
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.49
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.48
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.48
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.48
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.47
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.46
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.45
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.45
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.44
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.44
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.44
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.43
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.43
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.43
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.42
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.41
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.41
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.41
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.41
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.39
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.38
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.37
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.36
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.35
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.35
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.35
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.34
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.33
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.32
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.32
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.31
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.3
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.3
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.29
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.28
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.26
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.25
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.25
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.24
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.24
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.24
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.2
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.2
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.2
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.2
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.2
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.18
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.18
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.18
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.16
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.16
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.15
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.14
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.12
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.12
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.12
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.11
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.11
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.1
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.1
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.1
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.09
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.08
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.07
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.07
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.06
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.05
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.05
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.05
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.04
4had_A	350	Probable oxidoreductase protein; structural genomi	96.04
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	96.03
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.03
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.02
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.01
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.0
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.0
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.99
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.98
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.96
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.95
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.95
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.94
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.94
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.93
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.93
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.92
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.91
2o07_A	304	Spermidine synthase; structural genomics, structur	95.91
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.9
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.88
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.87
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.87
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.86
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.86
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.85
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.84
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.82
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.82
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.8
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.78
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	95.78
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	95.77
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.75
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.75
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.74
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.72
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	95.72
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.71
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.71
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.71
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.71
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.71
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.7
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.69
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.66
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.65
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.64
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.64
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.63
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.6
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.6
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.6
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.59
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.58
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.58
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.56
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.56
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.55
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.54
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.53
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.51
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.51
1xxl_A	239	YCGJ protein; structural genomics, protein structu	95.51
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.49
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.49
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.49
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.48
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.48
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.47
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.46
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.44
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.42
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.41
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.4
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.39
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.38
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.38
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.38
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.37
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.36
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.36
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.36
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.36
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.35
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.34
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.34
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.34
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.33
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.33
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.31
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.3
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.29
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.28
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.28
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.28
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.25
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	95.24
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.23
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.23
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.22
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.21
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	95.21
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	95.2
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.2
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.19
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	95.18
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.18
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.17
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.17
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.16
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.16

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.9e-51  Score=352.27  Aligned_cols=283  Identities=51%  Similarity=0.856  Sum_probs=253.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|+.|+|++..+++....+|+|+||++++++.++++|++
T Consensus        66 v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~  145 (356)
T 1pl8_A           66 VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDN  145 (356)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTT
T ss_pred             ccccceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCC
Confidence            78999999999999999999999999999999999999999999999999887775456799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++++||++.+++|||++++.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++++.
T Consensus       146 l~~~~aa~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  225 (356)
T 1pl8_A          146 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK  225 (356)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcc
Confidence            99999998888899999998789999999999999999999999999999977999999999999999999999887542


Q ss_pred             C-cccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCc
Q 022879          162 N-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  240 (290)
Q Consensus       162 ~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (290)
                      . .+++.+.+++.+  . .++|++||++|.+..+..++++++++|+++.+|.......++...++.+++++.+.+.+..+
T Consensus       226 ~~~~~~~~~i~~~~--~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  302 (356)
T 1pl8_A          226 ESPQEIARKVEGQL--G-CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT  302 (356)
T ss_dssp             CCHHHHHHHHHHHH--T-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSC
T ss_pred             cccchHHHHHHHHh--C-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHH
Confidence            1 245555665543  3 68999999999877889999999999999999975544556666788999999998877788


Q ss_pred             HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++++++++++|++++.+.++++|++  +++++|++.+.++ ..+|+|+++
T Consensus       303 ~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          303 WPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             HHHHHHHHHTTSCCCGGGEEEEEEG--GGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             HHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHhCC-CceEEEEeC
Confidence            9999999999999878889999999  9999999999988 889999975

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.6e-51  Score=356.45  Aligned_cols=283  Identities=43%  Similarity=0.718  Sum_probs=255.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++..+.+....+|+|+||++++++.++++|+ 
T Consensus        75 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-  153 (363)
T 3m6i_A           75 VLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-  153 (363)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-
T ss_pred             ccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-
Confidence            7899999999999999999999999999999999999999999999999998888767889999999999999999999 


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++++||++++++|||++++.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++ ++.++++..
T Consensus       154 ~s~~~aa~~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~  232 (363)
T 3m6i_A          154 MSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKV  232 (363)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEEC
T ss_pred             CCHHHHHhhhHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccc
Confidence            9999999888899999999888999999999999999999999999999997699999999999999999 655555432


Q ss_pred             ---CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecC
Q 022879          162 ---NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK  238 (290)
Q Consensus       162 ---~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (290)
                         ..+++.+.++++  +++.++|++||++|++..+..++++++++|+++.+|.......++...++.+++++.+.+.+.
T Consensus       233 ~~~~~~~~~~~v~~~--t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~  310 (363)
T 3m6i_A          233 ERLSAEESAKKIVES--FGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYC  310 (363)
T ss_dssp             CSCCHHHHHHHHHHH--TSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCS
T ss_pred             cccchHHHHHHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCH
Confidence               235666666665  356799999999998778899999999999999999766655677778899999999998778


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC-CCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vl~~  290 (290)
                      ++++++++++++|++++.+.++++|++  +++++|++.+.++ ...+|+|+++
T Consensus       311 ~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          311 NTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             SCHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HHHHHHHHHHHhCCCChHHceeeeeeH--HHHHHHHHHHhccCCCeEEEEEec
Confidence            899999999999999888889999999  9999999999987 6788999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-50  Score=349.05  Aligned_cols=285  Identities=50%  Similarity=0.861  Sum_probs=253.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|++++|++..+.+....+|+|+||++++++.++++|++
T Consensus        63 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~  142 (352)
T 1e3j_A           63 VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDN  142 (352)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTT
T ss_pred             cccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCC
Confidence            78999999999999999999999999999999999999999999999999887776556899999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++++||++.+++|||++++.+++++|++|||+|+|++|++++|+|+.+|++ |+++++++++.++++++|++.+++++.
T Consensus       143 ~~~~~aa~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~  221 (352)
T 1e3j_A          143 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP  221 (352)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc
Confidence            9999999888889999999878999999999999999999999999999995 899999999999999999999887542


Q ss_pred             CcccHHHHHHHHHHH-hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCc
Q 022879          162 NLQDIAEEVEKIQKA-MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  240 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (290)
                       .+++.+.+.+.+.. .+.++|++||++|.+..+..++++++++|+++.+|.......++...++.+++++.+.+.+..+
T Consensus       222 -~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  300 (352)
T 1e3j_A          222 -AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCND  300 (352)
T ss_dssp             -TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSC
T ss_pred             -cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHH
Confidence             14566666654310 1568999999999877889999999999999999975544456666788999999998877788


Q ss_pred             HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC-CceeEEEeC
Q 022879          241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  290 (290)
Q Consensus       241 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~~  290 (290)
                      ++++++++++|++++.+.++++|++  +++++|++.+.+++ ..+|+|+++
T Consensus       301 ~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          301 YPIALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             HHHHHHHHHTTSCCCGGGEEEEEEG--GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             HHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHhcCCCCceEEEEec
Confidence            9999999999999878888899999  99999999999887 689999975

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=6.9e-50  Score=344.20  Aligned_cols=283  Identities=30%  Similarity=0.520  Sum_probs=254.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +|+|||++|+|+++|++|+++++||+|++.+..+|+.|.+|..|++++|.+...+|. ..+|+|+||+++++++++++|+
T Consensus        55 ~i~G~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~  133 (346)
T 4a2c_A           55 ITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPT  133 (346)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCT
T ss_pred             ccccEEEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCC
Confidence            479999999999999999999999999999999999999999999999999888875 5789999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++++||++++++++++++...++++|++|||+|+|++|++++|+|+++|++++++++++++|+++++++|++++++++
T Consensus       134 ~l~~~~aa~l~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~  213 (346)
T 4a2c_A          134 DMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS  213 (346)
T ss_dssp             TSCGGGGGGHHHHHHHHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCCHHHHHhchHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCC
Confidence            99999999988888888888888999999999999999999999999999998889999999999999999999999854


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc---ccchhhhccCcEEEEeeec
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT---VPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~~~~~~  237 (290)
                        +.++.+.+++++  .+.++|++||++|.+..+..++++++++|+++.+|....+..   .+...++.+++++.|++..
T Consensus       214 --~~~~~~~~~~~~--~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~  289 (346)
T 4a2c_A          214 --EMSAPQMQSVLR--ELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMN  289 (346)
T ss_dssp             --TSCHHHHHHHHG--GGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTT
T ss_pred             --CCCHHHHHHhhc--ccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEecc
Confidence              456666666653  567899999999998899999999999999999997665432   3345578899999998643


Q ss_pred             ------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                            .++++++++++++|++++++.++++|+|  +++++|++.+++++..||+||.+
T Consensus       290 ~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l--~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          290 YSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             CCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECH--HHHHHHHHHHTTSCCCSEEEECC
T ss_pred             ccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeH--HHHHHHHHHHHcCCCceEEEEEC
Confidence                  4579999999999999888999999999  99999999999998899999864

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.2e-50  Score=351.11  Aligned_cols=284  Identities=29%  Similarity=0.545  Sum_probs=253.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|+.|.+|..|++++|.+...+|. ..+|+|+||++++++.++++|++
T Consensus        78 v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~  156 (370)
T 4ej6_A           78 TLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLT  156 (370)
T ss_dssp             ECCCSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTT
T ss_pred             ecCcceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCC-CCCCcceEEEEEchhhEEECCCC
Confidence            79999999999999999999999999999999999999999999999999888876 46899999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++++||++.+++|||++++.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++++ 
T Consensus       157 ~~~~~aal~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-  235 (370)
T 4ej6_A          157 LDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPS-  235 (370)
T ss_dssp             SCTTGGGGHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTT-
T ss_pred             CCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCC-
Confidence            9999999778999999999889999999999999999999999999999998899999999999999999999998753 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--CccccchhhhccCcEEEEeeecCC
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKN  239 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~  239 (290)
                       .+++.+.+++.....++++|++||++|.+..+..++++++++|+++.+|....  ...++...++.+++++.|++....
T Consensus       236 -~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  314 (370)
T 4ej6_A          236 -AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF  314 (370)
T ss_dssp             -SSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTT
T ss_pred             -CcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChH
Confidence             46777766652111233899999999987889999999999999999997554  446667778899999999988878


Q ss_pred             cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCC-CceeEEEeC
Q 022879          240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  290 (290)
Q Consensus       240 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vl~~  290 (290)
                      .++++++++++|++++.+.++++|++  +++++|++.+.+++ ..+|+++++
T Consensus       315 ~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          315 VHRRAADLVATGAIEIDRMISRRISL--DEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             CHHHHHHHHHTTCSCCGGGEEEEECG--GGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             HHHHHHHHHHcCCCChhHcEEEEEEH--HHHHHHHHHHHcCCCCeEEEEEcc
Confidence            89999999999999888899999999  99999999998775 457888764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.1e-49  Score=343.01  Aligned_cols=280  Identities=33%  Similarity=0.603  Sum_probs=237.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++++|++...+|. ..+|+|+||++++++.++++|++
T Consensus        64 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~  142 (348)
T 2d8a_A           64 IMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKS  142 (348)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTT
T ss_pred             ccCccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCC
Confidence            68999999999999999999999999999999999999999999999998877764 46799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +++++||++++++|||++++.+++ +|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++++ 
T Consensus       143 ~~~~~aa~~~~~~ta~~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~-  220 (348)
T 2d8a_A          143 IPPEYATLQEPLGNAVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF-  220 (348)
T ss_dssp             SCHHHHTTHHHHHHHHHHHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTT-
T ss_pred             CCHHHHHhhhHHHHHHHHHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC-
Confidence            999999988889999999977888 999999999999999999999999995588999999999999999999988754 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccc-hhhhccCcEEEEeeec--C
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--K  238 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~  238 (290)
                       .+++.+.+++++  .+.++|++||++|.+..+..+++.++++|+++.+|.......++. ..++.+++++.+.+..  .
T Consensus       221 -~~~~~~~v~~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  297 (348)
T 2d8a_A          221 -EEDVVKEVMDIT--DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLW  297 (348)
T ss_dssp             -TSCHHHHHHHHT--TTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSH
T ss_pred             -CcCHHHHHHHHc--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcH
Confidence             457777776653  456899999999987788999999999999999997655455666 6677899999997654  4


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeEee-CChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          239 NTWPLCLELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++++++++++++|++++.+.++++|+ +  +++++|++.+.+ ...+|+|+++
T Consensus       298 ~~~~~~~~l~~~g~i~~~~~i~~~~~gl--~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          298 ETWYTVSRLLQSGKLNLDPIITHKYKGF--DKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             HHHHHHHHHHHHTCCCCTTTEEEEEESS--TTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             HHHHHHHHHHHcCCCChHHhheeeCCCH--HHHHHHHHHHhC-CCceEEEEee
Confidence            67999999999999888899999999 9  999999999977 5789999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.7e-49  Score=341.04  Aligned_cols=278  Identities=33%  Similarity=0.595  Sum_probs=249.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++...+|. ..+|+|+||++++++.++++|++
T Consensus        60 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~  138 (343)
T 2dq4_A           60 VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD  138 (343)
T ss_dssp             ECCCEEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTT
T ss_pred             cCCccceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCC
Confidence            78999999999999999999999999999999999999999999999999877654 46799999999999999999999


Q ss_pred             CChhhhhhhhhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           82 VSLEEGAMCEPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +++++||++++++|||+++. .+++ +|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++ ++.++++.
T Consensus       139 ~~~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~  216 (343)
T 2dq4_A          139 LPFEVAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPL  216 (343)
T ss_dssp             SCHHHHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTT
T ss_pred             CCHHHHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcC
Confidence            99999998888899999998 6888 999999999999999999999999995589999999999999999 99888754


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccc-hhhhccCcEEEEeeec--
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--  237 (290)
                        ++++.+.+++++   +.++|++||++|.+..+..++++++++|+++.+|.......++. ..++.+++++.|.+..  
T Consensus       217 --~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  291 (343)
T 2dq4_A          217 --EEDLLEVVRRVT---GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRL  291 (343)
T ss_dssp             --TSCHHHHHHHHH---SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCT
T ss_pred             --ccCHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCC
Confidence              467777777653   56899999999987788999999999999999997655445666 6678899999998654  


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .++++++++++++|++++++.++++|++  +++++|++.+.+++. +|+|+++
T Consensus       292 ~~~~~~~~~l~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          292 WQTWMQGTALVYSGRVDLSPLLTHRLPL--SRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             THHHHHHHHHHHHTSSCCGGGEEEEEEG--GGHHHHHHHHHHSSC-SEEEEET
T ss_pred             HHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHhcCCc-eEEEEee
Confidence            6789999999999998778889999999  999999999988766 9999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.1e-48  Score=340.11  Aligned_cols=283  Identities=25%  Similarity=0.418  Sum_probs=244.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC------------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PP   59 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~   59 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++....   |.                  ..
T Consensus        64 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~  143 (378)
T 3uko_A           64 CILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFM  143 (378)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCT
T ss_pred             ccCCccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCccccccc
Confidence            4799999999999999999999999999999999999999999999999986541   11                  11


Q ss_pred             CCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEE
Q 022879           60 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVI  137 (290)
Q Consensus        60 ~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~  137 (290)
                      ..|+|+||+.++++.++++|+++++++||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|+++|++
T Consensus       144 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~  223 (378)
T 3uko_A          144 GTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIG  223 (378)
T ss_dssp             TTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEE
T ss_pred             CCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence            23799999999999999999999999999885 8889999885 488999999999999999999999999999977999


Q ss_pred             EeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCC
Q 022879          138 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE  216 (290)
Q Consensus       138 v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~  216 (290)
                      ++.+++|+++++++|++.++++...++++.+.+++++  .+ ++|++|||+|.+..+..++++++++ |+++.+|.....
T Consensus       224 ~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~--~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~  300 (378)
T 3uko_A          224 IDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLT--DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG  300 (378)
T ss_dssp             ECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHT--TS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT
T ss_pred             EcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhc--CC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCC
Confidence            9999999999999999999886544577888877763  34 8999999999988899999999996 999999975433


Q ss_pred             cc--ccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          217 MT--VPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       217 ~~--~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ..  ++...++ +++++.+.+..    .++++++++++++|++++.+.++++|++  +++++|++.+.+++.. |+||++
T Consensus       301 ~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          301 QEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL--GEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             CCEEECTHHHH-TTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHTTCTTCS-EEEEET
T ss_pred             CccccCHHHHh-cCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH--HHHHHHHHHHHCCCce-EEEEec
Confidence            33  3333344 48889887643    5678999999999999888889999999  9999999999988655 999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.7e-48  Score=335.57  Aligned_cols=283  Identities=27%  Similarity=0.490  Sum_probs=243.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCc----c---ccCC---------------
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----F---FATP---------------   58 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~---------------   58 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++++|++..    +   .|..               
T Consensus        63 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~  142 (376)
T 1e3i_A           63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIY  142 (376)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEB
T ss_pred             cccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccc
Confidence            47999999999999999999999999999999999999999999999999754    1   0110               


Q ss_pred             --CCCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCe
Q 022879           59 --PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPR  134 (290)
Q Consensus        59 --~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~  134 (290)
                        ...|+|+||++++++.++++|+++++++||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++.
T Consensus       143 ~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~  222 (376)
T 1e3i_A          143 HFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASR  222 (376)
T ss_dssp             CCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSE
T ss_pred             cccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence              124999999999999999999999999999885 7889999885 488999999999999999999999999999977


Q ss_pred             EEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccC
Q 022879          135 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG  213 (290)
Q Consensus       135 vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  213 (290)
                      |+++++++++.++++++|++.++++....+++.+.+++++  .+ ++|++||++|.+..+..+++.++++ |+++.+|..
T Consensus       223 Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~--~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~  299 (376)
T 1e3i_A          223 IIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELT--AG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK  299 (376)
T ss_dssp             EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHH--TS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS
T ss_pred             EEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHh--CC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCC
Confidence            9999999999999999999999876432356777777664  34 8999999999877889999999999 999999974


Q ss_pred             CCCccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          214 HHEMTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       214 ~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      .....++...++.+. ++.+++..    .++++++++++++|++++.+.++++|++  +++++|++.+.+++ .+|+||+
T Consensus       300 ~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~  375 (376)
T 1e3i_A          300 VDEMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESINDAIDLMKEGK-SIRTILT  375 (376)
T ss_dssp             SSEEEEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEE
T ss_pred             CCccccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH--HHHHHHHHHHhcCC-cceEEEe
Confidence            433345555566777 99887643    4578999999999999777888999999  99999999998875 5799997


Q ss_pred             C
Q 022879          290 L  290 (290)
Q Consensus       290 ~  290 (290)
                      |
T Consensus       376 ~  376 (376)
T 1e3i_A          376 F  376 (376)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.6e-48  Score=333.35  Aligned_cols=277  Identities=26%  Similarity=0.395  Sum_probs=247.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEE-EcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVA-LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|+++++|++||||. ..+..+|+.|.+|+.|+.++|......+. ..+|+|+||++++++.++++|
T Consensus        59 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP  137 (340)
T 3s2e_A           59 FIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLP  137 (340)
T ss_dssp             BCCCSEEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECC
T ss_pred             cccCCcceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECC
Confidence            3799999999999999999999999994 56788999999999999999999887765 568999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++++||.+ ..+.|||++++..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.+++
T Consensus       138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~  216 (340)
T 3s2e_A          138 DKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN  216 (340)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            99999999977 478899999988899999999999999999999999999999 7999999999999999999999988


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +.  ++++.+.+++   +.+ ++|++||++|.+..+..++++++++|+++.+|.......++...++.+++++.+.+.. 
T Consensus       217 ~~--~~~~~~~~~~---~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~  290 (340)
T 3s2e_A          217 AR--DTDPAAWLQK---EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGT  290 (340)
T ss_dssp             TT--TSCHHHHHHH---HHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             CC--CcCHHHHHHH---hCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCC
Confidence            54  4677777665   234 8999999999888999999999999999999976655566667788899999998776 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .++++++++++++|++++  . .+.+++  +++++|++.+.+++..||+||++
T Consensus       291 ~~~~~~~~~l~~~g~l~~--~-~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          291 RSDLQESLDFAAHGDVKA--T-VSTAKL--DDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             HHHHHHHHHHHHTTSCCC--C-EEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCc--e-EEEEeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            678999999999999944  3 356778  99999999999998999999975

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.4e-47  Score=332.69  Aligned_cols=282  Identities=23%  Similarity=0.378  Sum_probs=241.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cCC-----------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~   60 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++....   |..                 ..
T Consensus        64 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~  143 (373)
T 1p0f_A           64 VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMG  143 (373)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTT
T ss_pred             cccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccC
Confidence            4799999999999999999999999999999999999999999999999976531   110                 13


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      .|+|+||++++++.++++|++++++ ||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++.|+++
T Consensus       144 ~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~  222 (373)
T 1p0f_A          144 TSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGV  222 (373)
T ss_dssp             TCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence            5999999999999999999999999 88875 7889999885 4889999999999999999999999999999779999


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCC--
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--  215 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--  215 (290)
                      ++++++.++++++|+++++++...++++.+.+++++  .+ ++|++||++|.++.+..++++++++ |+++.+|....  
T Consensus       223 ~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t--~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~  299 (373)
T 1p0f_A          223 GTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKT--NG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE  299 (373)
T ss_dssp             CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHT--TS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTC
T ss_pred             CCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHh--CC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCC
Confidence            999999999999999999886432356777777653  33 8999999999877889999999999 99999996543  


Q ss_pred             CccccchhhhccCcEEEEeeec---CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          216 EMTVPLTPAAVREVDVVGVFRY---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       216 ~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...++...++.+. ++.+.+..   .++++++++++++|++++.+.++++|++  +++++|++.+.+++ .+|+||+|
T Consensus       300 ~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~kvvi~~  373 (373)
T 1p0f_A          300 RLPLDPLLLLTGR-SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFELLSSGQ-GVRSIMIY  373 (373)
T ss_dssp             CEEECTHHHHTTC-EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG--GGHHHHHHHTTTSS-CSEEEEEC
T ss_pred             ccccCHHHhccCc-eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeH--HHHHHHHHHHHCCC-cceEEEeC
Confidence            2344445566677 88887643   3689999999999999777888899999  99999999998775 47999976

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.4e-48  Score=336.47  Aligned_cols=284  Identities=26%  Similarity=0.363  Sum_probs=246.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCC--ceE
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCF   76 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~--~~~   76 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.++.+.|......  .....+|+|+||+.+++.  .++
T Consensus        55 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~  134 (352)
T 3fpc_A           55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLA  134 (352)
T ss_dssp             EECCCEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCE
T ss_pred             cccCCcceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEE
Confidence            3799999999999999999999999999999999999999999999999865321  123468999999999986  899


Q ss_pred             ECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           77 KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        77 ~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      ++|+++++++|+.+ .+++|||++++.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|+++
T Consensus       135 ~iP~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  214 (352)
T 3fpc_A          135 HLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD  214 (352)
T ss_dssp             ECCTTSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE
T ss_pred             ECCCCCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce
Confidence            99999999999988 58899999998899999999999999999999999999999977999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh----hhccCcEE
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV  231 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i  231 (290)
                      +++++  ++++.+.+++++  .+.++|++||++|.+..+..++++++++|+++.+|.......++...    ..++.+++
T Consensus       215 vi~~~--~~~~~~~v~~~t--~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i  290 (352)
T 3fpc_A          215 IINYK--NGDIVEQILKAT--DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHI  290 (352)
T ss_dssp             EECGG--GSCHHHHHHHHT--TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEE
T ss_pred             EEcCC--CcCHHHHHHHHc--CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEE
Confidence            98753  467877777763  56689999999998778999999999999999999765433333332    33578899


Q ss_pred             EEeeec--CCcHHHHHHHHHcCCCCCCCceeeEee-CChhhHHHHHHHHhcCCC-ceeEEEeC
Q 022879          232 VGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGT-AIKVMFNL  290 (290)
Q Consensus       232 ~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~-~gk~vl~~  290 (290)
                      .+....  ..+++++++++++|++++.+.++++|+ +  +++++|++.+.+++. .+|+||++
T Consensus       291 ~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl--~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          291 HGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGF--DNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             EEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEEEST--THHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             EEeeccCchhHHHHHHHHHHcCCCChhHhheeeCCCH--HHHHHHHHHHHhCCCCcEEEEEEe
Confidence            988754  567999999999999988888999998 9  999999999988644 48999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=2e-47  Score=331.91  Aligned_cols=283  Identities=25%  Similarity=0.406  Sum_probs=243.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cCC-----------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~   60 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++....   |..                 ..
T Consensus        63 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~  142 (374)
T 2jhf_A           63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG  142 (374)
T ss_dssp             BCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTT
T ss_pred             cccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccC
Confidence            4799999999999999999999999999999999999999999999999976532   110                 12


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      .|+|+||++++++.++++|+++++++||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++.|+++
T Consensus       143 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~  222 (374)
T 2jhf_A          143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGV  222 (374)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence            5999999999999999999999999999885 7889999885 4889999999999999999999999999999779999


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCC--
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--  215 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--  215 (290)
                      ++++++.++++++|++.+++++...+++.+.+++++  . +++|++||++|.+..+..++++++++ |+++.+|....  
T Consensus       223 ~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~--~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~  299 (374)
T 2jhf_A          223 DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMS--N-GGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ  299 (374)
T ss_dssp             CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHT--T-SCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTC
T ss_pred             cCCHHHHHHHHHhCCceEecccccchhHHHHHHHHh--C-CCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCC
Confidence            999999999999999999876432356777776653  3 38999999999877889999999999 99999996543  


Q ss_pred             CccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          216 EMTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       216 ~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...++...++.+. ++.+.+..    .++++++++++++|++++.+.++++|++  +++++|++.+.+++ .+|+||+|
T Consensus       300 ~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  374 (374)
T 2jhf_A          300 NLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDLLRSGE-SIRTILTF  374 (374)
T ss_dssp             CEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             ccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeH--HHHHHHHHHHHCCC-cceEEEeC
Confidence            2344555566777 99887643    4579999999999999877888999999  99999999998875 47999976

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-47  Score=332.80  Aligned_cols=283  Identities=24%  Similarity=0.406  Sum_probs=242.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cCC-----------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~   60 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++....   |..                 ..
T Consensus        64 ~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~  143 (374)
T 1cdo_A           64 VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLG  143 (374)
T ss_dssp             EECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGG
T ss_pred             cccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccC
Confidence            3799999999999999999999999999999999999999999999999976532   110                 02


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      +|+|+||++++++.++++|+++++++||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++.|+++
T Consensus       144 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~  223 (374)
T 1cdo_A          144 TSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAV  223 (374)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence            4999999999999999999999999999885 7889999885 4889999999999999999999999999999779999


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCC-C
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-E  216 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~  216 (290)
                      ++++++.++++++|++.++++....+++.+.+++++  .+ ++|++||++|.+..+..++++++++ |+++.+|.... .
T Consensus       224 ~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~--~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~  300 (374)
T 1cdo_A          224 DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMT--NG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD  300 (374)
T ss_dssp             CSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHH--TS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSC
T ss_pred             cCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHh--CC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCC
Confidence            999999999999999999876432356777777664  33 8999999999877889999999999 99999996543 3


Q ss_pred             ccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          217 MTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       217 ~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ..++...++.+. ++.+.+..    .++++++++++++|++++.+.++++|++  +++++|++.+.+++ .+|+||+|
T Consensus       301 ~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~kvvi~~  374 (374)
T 1cdo_A          301 VATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKHGK-CIRTVLSL  374 (374)
T ss_dssp             EEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             cccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH--HHHHHHHHHHHCCC-eeEEEEeC
Confidence            344445566677 89887643    4578999999999999777888999999  99999999998875 47999986

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-48  Score=335.68  Aligned_cols=274  Identities=23%  Similarity=0.381  Sum_probs=241.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++++|++...+|. ..+|+|+||++++++.++++|++
T Consensus        76 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~  154 (359)
T 1h2b_A           76 TLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKD  154 (359)
T ss_dssp             ECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTT
T ss_pred             ecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCC
Confidence            78999999999999999999999999999999999999999999999998876664 56799999999999999999999


Q ss_pred             CChhhhh---hhh-hhHHHHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCC
Q 022879           82 VSLEEGA---MCE-PLSVGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGAD  154 (290)
Q Consensus        82 ~~~~~aa---~~~-~~~ta~~~l~~--~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~  154 (290)
                      +++++||   .++ .+.|||+++..  +++++|++|||+|+|++|++++|+|+.+ |+ +|+++++++++.++++++|++
T Consensus       155 ~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~  233 (359)
T 1h2b_A          155 ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGAD  233 (359)
T ss_dssp             CCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCS
T ss_pred             CCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCC
Confidence            9999998   443 66789999987  8999999999999999999999999999 99 699999999999999999999


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH--HHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  232 (290)
                      ++++++  ++ +.+.+++++  .+.++|++||++|.+.  .+..++++  ++|+++.+|..... .++...++.+++++.
T Consensus       234 ~vi~~~--~~-~~~~v~~~~--~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~  305 (359)
T 1h2b_A          234 HVVDAR--RD-PVKQVMELT--RGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFE  305 (359)
T ss_dssp             EEEETT--SC-HHHHHHHHT--TTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEE
T ss_pred             EEEecc--ch-HHHHHHHHh--CCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEE
Confidence            998864  23 666676653  3558999999999865  77777777  89999999975544 566666788999999


Q ss_pred             Eeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          233 GVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+.. .++++++++++++|++  ++.+ ++|++  +++++|++.+.+++..+|+|+++
T Consensus       306 g~~~~~~~~~~~~~~l~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          306 GSLVGNYVELHELVTLALQGKV--RVEV-DIHKL--DEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             ECCSCCHHHHHHHHHHHHTTSC--CCCE-EEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EecCCCHHHHHHHHHHHHcCCC--cceE-EEEeH--HHHHHHHHHHHcCCCceEEEeeC
Confidence            98765 5679999999999998  5567 88999  99999999999988789999975

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=4.4e-48  Score=332.60  Aligned_cols=277  Identities=26%  Similarity=0.405  Sum_probs=242.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc----cCCCCCcccceeEeec-CCceE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----ATPPVHGSLANQVVHP-ADLCF   76 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~e~~~v~-~~~~~   76 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|......    .+...+|+|+||++++ ++.++
T Consensus        59 i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  138 (345)
T 3jv7_A           59 TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLV  138 (345)
T ss_dssp             ECCSEEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEE
T ss_pred             ccCcccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceE
Confidence            789999999999999999999999999999999999999999999999433222    1234679999999999 99999


Q ss_pred             ECCCCCChhhhhhh-hhhHHHHHHHHhc--CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           77 KLPDNVSLEEGAMC-EPLSVGVHACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        77 ~~P~~~~~~~aa~~-~~~~ta~~~l~~~--~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      ++|+ +++++||.+ .++.|||+++...  .+++|++|||+|+|++|++++|+|+.+|..+|+++++++++.++++++|+
T Consensus       139 ~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa  217 (345)
T 3jv7_A          139 PIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA  217 (345)
T ss_dssp             ECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC
T ss_pred             eCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            9999 999999977 5889999999874  89999999999999999999999999955589999999999999999999


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEE
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVV  232 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~  232 (290)
                      +.+++++   +++.+.+++++  .+.++|++||++|.+..+..++++++++|+++.+|.... ...++. .++.+++++.
T Consensus       218 ~~~i~~~---~~~~~~v~~~t--~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~  291 (345)
T 3jv7_A          218 DAAVKSG---AGAADAIRELT--GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVV  291 (345)
T ss_dssp             SEEEECS---TTHHHHHHHHH--GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEE
T ss_pred             CEEEcCC---CcHHHHHHHHh--CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEE
Confidence            9998853   36777777764  566899999999997789999999999999999997654 445554 6778999999


Q ss_pred             Eeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          233 GVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+.. .++++++++++++|++++   ++++|++  +++++|++.+.+++..||+||++
T Consensus       292 g~~~~~~~~~~~~~~l~~~g~l~~---~~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          292 TPYWGTRSELMEVVALARAGRLDI---HTETFTL--DEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCCSCCHHHHHHHHHHHHTTCCCC---CEEEECS--TTHHHHHHHHHHTCCSSEEEECC
T ss_pred             EEecCCHHHHHHHHHHHHcCCCce---EEEEEcH--HHHHHHHHHHHcCCCceeEEeCC
Confidence            98776 678999999999999954   4578888  99999999999999999999975

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-48  Score=336.02  Aligned_cols=280  Identities=27%  Similarity=0.451  Sum_probs=242.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC----------------------C
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------P   58 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~   58 (290)
                      +++|||++|+|+++|++|++|++||||++.+ .+|++|.+|+.|++++|++...++.                      .
T Consensus        61 ~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~  139 (371)
T 1f8f_A           61 AVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHF  139 (371)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCG
T ss_pred             cccCcccceEEEEeCCCCCCCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccc
Confidence            4799999999999999999999999999999 9999999999999999987652110                      0


Q ss_pred             CCCcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEE
Q 022879           59 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIV  136 (290)
Q Consensus        59 ~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv  136 (290)
                      ..+|+|+||++++++.++++|+++++++||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++.|+
T Consensus       140 ~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi  219 (371)
T 1f8f_A          140 FAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIII  219 (371)
T ss_dssp             GGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEE
T ss_pred             cCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEE
Confidence            125999999999999999999999999999885 8899999984 58899999999999999999999999999997789


Q ss_pred             EEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-
Q 022879          137 IVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-  215 (290)
Q Consensus       137 ~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-  215 (290)
                      ++++++++.++++++|++.++++.  ++++.+.+++++  .+ ++|++||++|.+..+..++++++++|+++.+|.... 
T Consensus       220 ~~~~~~~~~~~a~~lGa~~vi~~~--~~~~~~~~~~~~--~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~  294 (371)
T 1f8f_A          220 AVDIVESRLELAKQLGATHVINSK--TQDPVAAIKEIT--DG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG  294 (371)
T ss_dssp             EEESCHHHHHHHHHHTCSEEEETT--TSCHHHHHHHHT--TS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT
T ss_pred             EECCCHHHHHHHHHcCCCEEecCC--ccCHHHHHHHhc--CC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC
Confidence            999999999999999999998854  457777776653  34 899999999987788999999999999999996542 


Q ss_pred             -CccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          216 -EMTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       216 -~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       ...++...++.+++++.+.+..    .++++++++++++|++++.+.+++ |++  +++++|++.+.+++. +|+||++
T Consensus       295 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l--~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          295 TTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             CCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG--GGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             CccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH--HHHHHHHHHHHCCCc-eEEEEee
Confidence             2355666678899999998653    357899999999999977777888 999  999999999988754 7999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1.9e-47  Score=331.98  Aligned_cols=283  Identities=27%  Similarity=0.404  Sum_probs=242.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---cC-----------------CCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~   60 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++....   |.                 ...
T Consensus        62 ~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~  141 (373)
T 2fzw_A           62 VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMG  141 (373)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTT
T ss_pred             ccccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccC
Confidence            4799999999999999999999999999999999999999999999999976421   11                 013


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      .|+|+||++++++.++++|+++++++||.++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++.|+++
T Consensus       142 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~  221 (373)
T 2fzw_A          142 TSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV  221 (373)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence            5999999999999999999999999999885 7889999885 4889999999999999999999999999999779999


Q ss_pred             eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCC--
Q 022879          139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--  215 (290)
Q Consensus       139 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--  215 (290)
                      ++++++.++++++|++.++++....+++.+.+++++  . +++|++||++|.+..+..++++++++ |+++.+|....  
T Consensus       222 ~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~--~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~  298 (373)
T 2fzw_A          222 DINKDKFARAKEFGATECINPQDFSKPIQEVLIEMT--D-GGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE  298 (373)
T ss_dssp             CSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHT--T-SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTC
T ss_pred             cCCHHHHHHHHHcCCceEeccccccccHHHHHHHHh--C-CCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCc
Confidence            999999999999999999876432356777776653  3 38999999999877889999999999 99999996543  


Q ss_pred             CccccchhhhccCcEEEEeeec----CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          216 EMTVPLTPAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       216 ~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...++...++.+. ++.+....    .++++++++++++|++++.+.++++|++  +++++|++.+.+++. +|+||+|
T Consensus       299 ~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          299 EIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG--GGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             eeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            2344455566677 89887543    4579999999999999777888999999  999999999988754 7999976

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-48  Score=337.22  Aligned_cols=282  Identities=24%  Similarity=0.421  Sum_probs=246.3

Q ss_pred             CccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCChhhc-CCCCCCCCCCccccCC-------CCCcccce
Q 022879            1 MVIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVHGSLAN   66 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~e   66 (290)
                      +++|||++|+|+++| +|+      +|++||||++.+..+|++|.+|. .|++++|++...++..       ..+|+|+|
T Consensus        73 ~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~ae  151 (380)
T 1vj0_A           73 IILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSS  151 (380)
T ss_dssp             BCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBS
T ss_pred             cccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccc
Confidence            479999999999999 999      99999999999999999999999 9999999988766531       35799999


Q ss_pred             eEee-cCCceEECCCCCChh-hhhhhhhhHHHHHHHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879           67 QVVH-PADLCFKLPDNVSLE-EGAMCEPLSVGVHACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus        67 ~~~v-~~~~~~~~P~~~~~~-~aa~~~~~~ta~~~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      |+++ +++.++++|++++++ +|+++++++|||++++.++ +++|++|||+|+|++|++++|+|+.+|+..|++++++++
T Consensus       152 y~~v~~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~  231 (380)
T 1vj0_A          152 HIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPN  231 (380)
T ss_dssp             EEEECTTCCEEEECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHH
T ss_pred             eEEEcccceEEECCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHH
Confidence            9999 999999999999999 8888889999999998788 999999999999999999999999999547999999999


Q ss_pred             HHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-C-Ccccc
Q 022879          144 RLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-H-EMTVP  220 (290)
Q Consensus       144 ~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~  220 (290)
                      +.++++++|++.++++.. .++++.+.+++++  .+.++|++||++|.+..+..++++++++|+++.+|... . ...++
T Consensus       232 ~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~  309 (380)
T 1vj0_A          232 RLKLAEEIGADLTLNRRETSVEERRKAIMDIT--HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFK  309 (380)
T ss_dssp             HHHHHHHTTCSEEEETTTSCHHHHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEEC
T ss_pred             HHHHHHHcCCcEEEeccccCcchHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEc
Confidence            999999999999887531 1346666666542  45589999999998678899999999999999999755 3 44566


Q ss_pred             chh-hhccCcEEEEeeec-CCcHHHHHHHHHc--CCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          221 LTP-AAVREVDVVGVFRY-KNTWPLCLELLRS--GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       221 ~~~-~~~~~~~i~~~~~~-~~~l~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ... ++.+++++.+.+.. .++++++++++++  |++  ++.++++|++  +++++|++.+.+++.. |+||++
T Consensus       310 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          310 VYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL--SKLITHRLPL--KEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             HHHHTTTTTCEEEECCCCCHHHHHHHHHHHHTCHHHH--GGGCCEEEEG--GGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             hHHHHHhCCeEEEEeecCCHHHHHHHHHHHHhhcCCe--eeEEEEEEeH--HHHHHHHHHHhcCCCc-eEEEEe
Confidence            666 78899999998765 5679999999999  988  6778889999  9999999999888777 999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=5.3e-47  Score=324.95  Aligned_cols=277  Identities=29%  Similarity=0.450  Sum_probs=242.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|++|++|++||||++.+.. .|++|.+|+.|++++|++....|. ..+|+|+||+.++++.++++|
T Consensus        57 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P  135 (339)
T 1rjw_A           57 LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIP  135 (339)
T ss_dssp             BCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECC
T ss_pred             eeccccceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECC
Confidence            379999999999999999999999999987654 599999999999999998877664 567999999999999999999


Q ss_pred             CCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           80 DNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        80 ~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++++||.++ .+.|||++++..++++|++|||+|+|++|++++|+++.+|+ .|+++++++++.++++++|++.+++
T Consensus       136 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d  214 (339)
T 1rjw_A          136 DNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVN  214 (339)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEEC
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEec
Confidence            999999999774 77899999987789999999999998899999999999999 7999999999999999999998887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +.  ++++.+.+++.+    .++|++||++|.+..+..++++++++|+++.+|.......++...++.+++++.+.+.. 
T Consensus       215 ~~--~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~  288 (339)
T 1rjw_A          215 PL--KEDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGT  288 (339)
T ss_dssp             TT--TSCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             CC--CccHHHHHHHHh----CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCC
Confidence            54  356777776653    47999999999877889999999999999999976554455556677899999998765 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .++++++++++++|++++  . .++|++  +++++|++.+.+++..+|+|+++
T Consensus       289 ~~~~~~~~~l~~~g~l~~--~-~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          289 RKDLQEALQFAAEGKVKT--I-IEVQPL--EKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             HHHHHHHHHHHHTTSCCC--C-EEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCc--c-EEEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            567999999999999954  3 468888  99999999999887789999975

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.6e-47  Score=334.11  Aligned_cols=276  Identities=25%  Similarity=0.422  Sum_probs=242.9

Q ss_pred             ccccceeEEEEEeCCCC------CCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCce
Q 022879            2 VIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC   75 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v------~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~   75 (290)
                      ++|||++|+|+++|++|      ++|++||||++.+..+|+.|.+|+.|++++|++...+|. ..+|+|+||++++++.+
T Consensus        94 i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~  172 (404)
T 3ip1_A           94 TLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYA  172 (404)
T ss_dssp             ECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGE
T ss_pred             ccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHe
Confidence            78999999999999999      899999999999999999999999999999999888775 56899999999999999


Q ss_pred             EECCCCCCh------hhhhhh-hhhHHHHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879           76 FKLPDNVSL------EEGAMC-EPLSVGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS  146 (290)
Q Consensus        76 ~~~P~~~~~------~~aa~~-~~~~ta~~~l~~--~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~  146 (290)
                      +++|+++++      .++|.+ .+++|||+++..  +++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.+
T Consensus       173 ~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  252 (404)
T 3ip1_A          173 WSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRN  252 (404)
T ss_dssp             EECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             EeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            999998753      345544 689999999853  58999999999999999999999999999978999999999999


Q ss_pred             HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHh----ccCCEEEEeccCCCCccccc
Q 022879          147 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGAT----CAGGKVCLVGMGHHEMTVPL  221 (290)
Q Consensus       147 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~  221 (290)
                      +++++|++.++++.  .+++.+.+++++  .+.++|++|||+|.+ ..+..+++.|    +++|+++.+|.......++.
T Consensus       253 ~~~~lGa~~vi~~~--~~~~~~~i~~~t--~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~  328 (404)
T 3ip1_A          253 LAKELGADHVIDPT--KENFVEAVLDYT--NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTG  328 (404)
T ss_dssp             HHHHHTCSEEECTT--TSCHHHHHHHHT--TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECH
T ss_pred             HHHHcCCCEEEcCC--CCCHHHHHHHHh--CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccH
Confidence            99999999998753  467888887763  567899999999986 3667777788    99999999998776667777


Q ss_pred             hhhhccCcEEEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEe
Q 022879          222 TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       222 ~~~~~~~~~i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ..++.+++++.|.+..  ...++++++++++| +++.+.++++|++  +++++|++.+.    .||+||+
T Consensus       329 ~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l--~~~~~A~~~~~----~GKvvl~  391 (404)
T 3ip1_A          329 EVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPEYIKRLQ----TDKSLVK  391 (404)
T ss_dssp             HHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECG--GGHHHHHHHTT----TCTTCSC
T ss_pred             HHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeH--HHHHHHHHHHh----CCcEEEe
Confidence            8888999999998864  67899999999999 8778889999999  99999999987    3576664

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=8.9e-47  Score=324.14  Aligned_cols=278  Identities=28%  Similarity=0.497  Sum_probs=245.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|++|+|++....|. ..+|+|+||+.++++.++++|++
T Consensus        60 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~  138 (343)
T 2eih_A           60 VLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKN  138 (343)
T ss_dssp             ECCSEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTT
T ss_pred             ccccceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCC
Confidence            78999999999999999999999999999999999999999999999999877654 45799999999999999999999


Q ss_pred             CChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++||.+ .++.|||+++.. ++++++++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.+++
T Consensus       139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d  217 (343)
T 2eih_A          139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN  217 (343)
T ss_dssp             SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence            999999955 689999999977 68999999999998 9999999999999999 7999999999999999999998887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +.  ++++.+.+++++  .+.++|++||++| ...+..+++.++++|+++.+|..... ..++...++.+++++.+....
T Consensus       218 ~~--~~~~~~~~~~~~--~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  292 (343)
T 2eih_A          218 YT--HPDWPKEVRRLT--GGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA  292 (343)
T ss_dssp             TT--STTHHHHHHHHT--TTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSC
T ss_pred             CC--cccHHHHHHHHh--CCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCc
Confidence            54  346666666543  3458999999999 46889999999999999999965433 246666778899999998754


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       .++++++++++++|++  ++.++++|++  +++++|++.+.+++..+|+|+++
T Consensus       293 ~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          293 SKSRLFPILRFVEEGKL--KPVVGQVLPL--EAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CGGGHHHHHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             cHHHHHHHHHHHHcCCC--CCceeEEeeH--HHHHHHHHHHHcCCCceEEEEec
Confidence             6789999999999998  5778899999  99999999999887889999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.3e-46  Score=323.97  Aligned_cols=280  Identities=25%  Similarity=0.429  Sum_probs=250.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +|+|||++|+|+++|++|++|++||||++.+.. .|+.|.+|..+..+.|......+. ..+|+|+||+.++++.++++|
T Consensus        56 ~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP  134 (348)
T 4eez_A           56 TVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVP  134 (348)
T ss_dssp             CBCCSEEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCC
T ss_pred             cccceeEEEEEEEECceeeecccCCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecC
Confidence            489999999999999999999999999987665 567999999999999998877765 578999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++.+|+.+ +.+.|+|++++.+++++|++|||+|+|++|.+++|+++.++..+|++++++++|.++++++|++.+++
T Consensus       135 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~  214 (348)
T 4eez_A          135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN  214 (348)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEe
Confidence            99999999987 47789999998888999999999999999999999999875558999999999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +.  ++++.+.+++++  ++.++|.++++++++..+..+++.++++|+++.+|.......++...++++++++.|++.. 
T Consensus       215 ~~--~~~~~~~v~~~t--~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~  290 (348)
T 4eez_A          215 SG--DVNPVDEIKKIT--GGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGT  290 (348)
T ss_dssp             C---CCCHHHHHHHHT--TSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCC
T ss_pred             CC--CCCHHHHhhhhc--CCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCC
Confidence            54  567888887763  6778999999999988999999999999999999987766677788889999999998776 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+++++++++++|++  ++.+ ++|+|  +++++|++.+++++..||+||+|
T Consensus       291 ~~~~~~~~~l~~~g~i--~p~~-~~~~l--~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          291 RLDLAEAFQFGAEGKV--KPIV-ATRKL--EEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             HHHHHHHHHHHHTTSC--CCCE-EEECG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCC--EEEE-EEEeH--HHHHHHHHHHHCCCCccEEEEEc
Confidence            6789999999999999  4444 67888  99999999999999899999986

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=6.2e-47  Score=325.25  Aligned_cols=273  Identities=23%  Similarity=0.362  Sum_probs=223.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeec-CCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~-~~~~~~~P~   80 (290)
                      ++|||++|+|+++|++ ++|++||||+..+..+|++|.+|+.|++++|++...+|. ..+|+|+||++++ ++.++++ +
T Consensus        62 i~G~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~  138 (344)
T 2h6e_A           62 ILGHENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-N  138 (344)
T ss_dssp             ECCCCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-S
T ss_pred             cccccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-C
Confidence            6899999999999999 999999999988889999999999999999998876664 4679999999999 9999999 9


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhc-----CCCCCCeEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHHcC
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRA-----NIGPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIG  152 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~-----~~~~~~~vlI~Gag~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~lg  152 (290)
                      ++++++||.+ ..+.|||+++...     ++ +|++|||+|+|++|++++|+|+.+  |+ .|+++++++++.++++++|
T Consensus       139 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lG  216 (344)
T 2h6e_A          139 SLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELG  216 (344)
T ss_dssp             SSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHT
T ss_pred             CCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhC
Confidence            9999999977 4778999999776     88 999999999999999999999999  99 6999999999999999999


Q ss_pred             CCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879          153 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  232 (290)
                      ++.++++... ++   .+++++  .+.++|++||++|.+..+..++++++++|+++.+|.......++...++.+++++.
T Consensus       217 a~~vi~~~~~-~~---~~~~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~  290 (344)
T 2h6e_A          217 ADYVSEMKDA-ES---LINKLT--DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLL  290 (344)
T ss_dssp             CSEEECHHHH-HH---HHHHHH--TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEE
T ss_pred             CCEEeccccc-hH---HHHHhh--cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEE
Confidence            9998874310 22   233332  35589999999998768999999999999999999765544566667788999999


Q ss_pred             Eeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          233 GVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+.. .++++++++++++|++  ++.+ ++|++  +++++|++.+.+++..+|+||++
T Consensus       291 g~~~~~~~~~~~~~~l~~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          291 GSNYGSLNDLEDVVRLSESGKI--KPYI-IKVPL--DDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             ECCSCCHHHHHHHHHHHHTTSS--CCCE-EEECC------------------CEEEECC
T ss_pred             EEecCCHHHHHHHHHHHHcCCC--Ccce-EEEeH--HHHHHHHHHHHcCCCceEEEEeC
Confidence            98765 5679999999999998  5557 88999  99999999999887789999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.9e-47  Score=333.29  Aligned_cols=282  Identities=21%  Similarity=0.392  Sum_probs=239.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCC--Cc------cccC--CCCCcccceeEee
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--MK------FFAT--PPVHGSLANQVVH   70 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~--~~~~g~~~e~~~v   70 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|++++|++  ..      .+|.  ...+|+|+||+++
T Consensus        62 ~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v  141 (398)
T 2dph_A           62 HVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLV  141 (398)
T ss_dssp             CBCCCCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEE
T ss_pred             cccCCceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEe
Confidence            479999999999999999999999999999999999999999999999987  21      2222  1357999999999


Q ss_pred             cCC--ceEECCCCCChhh----hhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879           71 PAD--LCFKLPDNVSLEE----GAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus        71 ~~~--~~~~~P~~~~~~~----aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      +++  .++++|+++++++    ||.+ .+++|||++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++
T Consensus       142 ~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~  221 (398)
T 2dph_A          142 PYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE  221 (398)
T ss_dssp             SSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred             ccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence            987  8999999999988    6666 58999999998789999999999999999999999999999977999999999


Q ss_pred             HHHHHHHcCCCEEEecCCCcccH-HHHHHHHHHHhCCCccEEEEccCCH--------------HHHHHHHHHhccCCEEE
Q 022879          144 RLSVAKEIGADNIVKVSTNLQDI-AEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVC  208 (290)
Q Consensus       144 ~~~~~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v  208 (290)
                      +.++++++|++ ++++.  .+++ .+.+++++  .+.++|++||++|.+              ..+..++++++++|+++
T Consensus       222 ~~~~a~~lGa~-~i~~~--~~~~~~~~~~~~~--~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv  296 (398)
T 2dph_A          222 RLKLLSDAGFE-TIDLR--NSAPLRDQIDQIL--GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG  296 (398)
T ss_dssp             HHHHHHTTTCE-EEETT--SSSCHHHHHHHHH--SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEE
T ss_pred             HHHHHHHcCCc-EEcCC--CcchHHHHHHHHh--CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEE
Confidence            99999999995 77754  3454 66676653  455899999999974              26889999999999999


Q ss_pred             EeccCC-------------CCccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCC--CCCceeeEeeCChhhHHH
Q 022879          209 LVGMGH-------------HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID--VKPLVTHRFGFSQKEVEE  272 (290)
Q Consensus       209 ~~g~~~-------------~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~  272 (290)
                      .+|...             ....++...++.+++++.+.... .+.++++++++++|+++  +.+.++++|++  +++++
T Consensus       297 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l--~~~~~  374 (398)
T 2dph_A          297 IPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL--DQAPD  374 (398)
T ss_dssp             CCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS--TTHHH
T ss_pred             EeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH--HHHHH
Confidence            999652             11234455677899999887654 67799999999999996  55578889999  99999


Q ss_pred             HHHHHhcCCCceeEEEeC
Q 022879          273 AFETSARGGTAIKVMFNL  290 (290)
Q Consensus       273 a~~~~~~~~~~gk~vl~~  290 (290)
                      |++.+.+++. +|+||++
T Consensus       375 A~~~~~~~~~-gKvvv~~  391 (398)
T 2dph_A          375 GYAKFDKGSP-AKFVIDP  391 (398)
T ss_dssp             HHHHHHTTCS-CEEEECT
T ss_pred             HHHHHhcCCc-eEEEEec
Confidence            9999998877 9999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=4.8e-47  Score=326.41  Aligned_cols=269  Identities=19%  Similarity=0.268  Sum_probs=232.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCC---------CCCcccceeEee
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATP---------PVHGSLANQVVH   70 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~e~~~v   70 (290)
                      +++|||++|+|+++|++|++|++||||++.+. .+|++|.+|+.|++|+|+ ....+..         ..+|+|+||+++
T Consensus        60 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v  138 (348)
T 3two_A           60 MIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVV  138 (348)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEE
T ss_pred             eecCcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEe
Confidence            37999999999999999999999999998654 689999999999999999 4333321         123999999999


Q ss_pred             cCCceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH
Q 022879           71 PADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  149 (290)
Q Consensus        71 ~~~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  149 (290)
                      +++.++++|+++++++||.++ .+.|||++++..++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++
T Consensus       139 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~  217 (348)
T 3two_A          139 DENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDAL  217 (348)
T ss_dssp             EGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHH
T ss_pred             chhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHH
Confidence            999999999999999999774 78899999988899999999999999999999999999999 7999999999999999


Q ss_pred             HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCcc-ccchhhh-c
Q 022879          150 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMT-VPLTPAA-V  226 (290)
Q Consensus       150 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~  226 (290)
                      ++|++.++ .+  .+.+           ..++|++||++|++..+..++++++++|+++.+|... .... ++...++ .
T Consensus       218 ~lGa~~v~-~~--~~~~-----------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~  283 (348)
T 3two_A          218 SMGVKHFY-TD--PKQC-----------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHL  283 (348)
T ss_dssp             HTTCSEEE-SS--GGGC-----------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHT
T ss_pred             hcCCCeec-CC--HHHH-----------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhh
Confidence            99999887 21  1111           1279999999998658899999999999999999766 4444 6656677 8


Q ss_pred             cCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          227 REVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       227 ~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +++++.+.+.. ..+++++++++++|++++  .+ ++|++  +++++|++.+.+++..||+||++
T Consensus       284 ~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~--~~-~~~~l--~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          284 GNRKVYGSLIGGIKETQEMVDFSIKHNIYP--EI-DLILG--KDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             CSCEEEECCSCCHHHHHHHHHHHHHTTCCC--CE-EEECG--GGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             CCeEEEEEecCCHHHHHHHHHHHHhCCCCc--eE-EEEEH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99999998776 567999999999999954  44 68888  99999999999998889999974

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.4e-46  Score=321.03  Aligned_cols=277  Identities=29%  Similarity=0.427  Sum_probs=244.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecC-CceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~P~   80 (290)
                      ++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|++|+|++...+|. ..+|+|+||+.+++ +.++++ +
T Consensus        65 i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~  142 (347)
T 1jvb_A           65 TLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-R  142 (347)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-S
T ss_pred             cccccceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-C
Confidence            68999999999999999999999999988889999999999999999998877664 56799999999999 999999 9


Q ss_pred             CCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.++ .+.|||++++.++++++++|||+|+ |++|++++|+++.. |+ .|+++++++++.+.++++|++.++
T Consensus       143 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~  221 (347)
T 1jvb_A          143 RLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVI  221 (347)
T ss_dssp             SSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHcccchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEe
Confidence            99999999774 7789999998889999999999998 59999999999999 99 689999999999999999999888


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~  236 (290)
                      ++.  ++++.+.+.++.  ..+++|++||++|.+..+..+++.++++|+++.+|... .. .++...++.+++++.+...
T Consensus       222 ~~~--~~~~~~~~~~~~--~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~  296 (347)
T 1jvb_A          222 NAS--MQDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLV  296 (347)
T ss_dssp             ETT--TSCHHHHHHHHT--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCS
T ss_pred             cCC--CccHHHHHHHHh--cCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEec
Confidence            754  356666666553  21489999999998768899999999999999999755 44 5666667889999999876


Q ss_pred             c-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      . .++++++++++++|++  ++.++++|++  +++++|++.+.+++..||+||++
T Consensus       297 ~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          297 GNQSDFLGIMRLAEAGKV--KPMITKTMKL--EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             CCHHHHHHHHHHHHTTSS--CCCCEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cCHHHHHHHHHHHHcCCC--CceEEEEEcH--HHHHHHHHHHHCCCCcceEEecC
Confidence            5 5689999999999998  5678889999  99999999999988889999975

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-46  Score=329.11  Aligned_cols=283  Identities=22%  Similarity=0.367  Sum_probs=236.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCc------cccC---CCCCcccceeEeec
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHP   71 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~g~~~e~~~v~   71 (290)
                      +++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|++++|+...      .+|.   ...+|+|+||++++
T Consensus        63 ~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~  142 (398)
T 1kol_A           63 LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVP  142 (398)
T ss_dssp             CBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEES
T ss_pred             cccCcccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEec
Confidence            47999999999999999999999999999888899999999999999999764      2222   13469999999999


Q ss_pred             CC--ceEECCCCCChhh----hhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879           72 AD--LCFKLPDNVSLEE----GAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus        72 ~~--~~~~~P~~~~~~~----aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      ++  .++++|+++++.+    ++.+ .+++|||++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|
T Consensus       143 ~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~  222 (398)
T 1kol_A          143 YADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR  222 (398)
T ss_dssp             SHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred             chhCeEEECCCCcchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHH
Confidence            87  8999999999887    5555 588999999988899999999999999999999999999999779999999999


Q ss_pred             HHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH---------------HHHHHHHHHhccCCEEEE
Q 022879          145 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---------------KTMSTALGATCAGGKVCL  209 (290)
Q Consensus       145 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~  209 (290)
                      +++++++|++ ++++.. ..++.+.+++++  .+.++|++||++|.+               ..+..++++++++|+++.
T Consensus       223 ~~~a~~lGa~-~i~~~~-~~~~~~~v~~~t--~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~  298 (398)
T 1kol_A          223 LAHAKAQGFE-IADLSL-DTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI  298 (398)
T ss_dssp             HHHHHHTTCE-EEETTS-SSCHHHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHcCCc-EEccCC-cchHHHHHHHHh--CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence            9999999997 666532 234677776653  456899999999974               278899999999999999


Q ss_pred             eccC-C-C-----------CccccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCC-CCCceeeEeeCChhhHHHHH
Q 022879          210 VGMG-H-H-----------EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID-VKPLVTHRFGFSQKEVEEAF  274 (290)
Q Consensus       210 ~g~~-~-~-----------~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~a~  274 (290)
                      +|.. . .           ...++...++.+++++.+.... .+.++++++++.+|+++ ..+.++++|++  +++++|+
T Consensus       299 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l--~~~~~A~  376 (398)
T 1kol_A          299 PGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL--DDAPRGY  376 (398)
T ss_dssp             CSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG--GGHHHHH
T ss_pred             eccccCCcccccccccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH--HHHHHHH
Confidence            9864 1 1           1233444567788998876543 45688999999999995 23567889999  9999999


Q ss_pred             HHHhcCCCceeEEEeC
Q 022879          275 ETSARGGTAIKVMFNL  290 (290)
Q Consensus       275 ~~~~~~~~~gk~vl~~  290 (290)
                      +.+.+++. +|+||++
T Consensus       377 ~~~~~~~~-gKvvi~~  391 (398)
T 1kol_A          377 GEFDAGVP-KKFVIDP  391 (398)
T ss_dssp             HHHHHTCS-CEEEECT
T ss_pred             HHHhCCCc-eEEEEEe
Confidence            99988866 9999975

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-46  Score=325.17  Aligned_cols=275  Identities=21%  Similarity=0.299  Sum_probs=231.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCc-ccc------CCCCCcccceeEeecC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMK-FFA------TPPVHGSLANQVVHPA   72 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~g~~~e~~~v~~   72 (290)
                      +++|||++|+|+++|++|++|++||||++.+.. .|++|.+|+.|++++|++.. .+.      +...+|+|+||+++++
T Consensus        78 ~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~  157 (369)
T 1uuf_A           78 CVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHE  157 (369)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEG
T ss_pred             eecccCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcc
Confidence            479999999999999999999999999987764 69999999999999999763 110      1135699999999999


Q ss_pred             CceEECCCC-CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879           73 DLCFKLPDN-VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus        73 ~~~~~~P~~-~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      +.++++|++ +++++||.+ ..+.|||+++...++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.+++++
T Consensus       158 ~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~  236 (369)
T 1uuf_A          158 RYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA  236 (369)
T ss_dssp             GGCEECCSCGGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred             hhEEECCCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            999999999 999999877 488899999988889999999999999999999999999999 59999999999999999


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccCc
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREV  229 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~  229 (290)
                      +|++.++++.  ++++   ++++    ..++|++||++|.+..+..+++.++++|+++.+|...... .++...++.+++
T Consensus       237 lGa~~vi~~~--~~~~---~~~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  307 (369)
T 1uuf_A          237 LGADEVVNSR--NADE---MAAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRR  307 (369)
T ss_dssp             HTCSEEEETT--CHHH---HHTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTC
T ss_pred             cCCcEEeccc--cHHH---HHHh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCc
Confidence            9999998754  2332   2222    1579999999998667889999999999999999755433 455566788999


Q ss_pred             EEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          230 DVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       230 ~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++.+.+.. .++++++++++++|+++  +.+ +.|++  +++++|++.+.+++..+|+|+++
T Consensus       308 ~i~g~~~~~~~~~~~~~~l~~~g~i~--~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          308 AIAGSMIGGIPETQEMLDFCAEHGIV--ADI-EMIRA--DQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             EEEECCSCCHHHHHHHHHHHHHHTCC--CCE-EEECG--GGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             EEEEeecCCHHHHHHHHHHHHhCCCC--cce-EEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99998765 56789999999999984  444 46888  99999999999887789999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.5e-47  Score=330.53  Aligned_cols=272  Identities=19%  Similarity=0.321  Sum_probs=236.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcC--CCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCCceEE
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS--CWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFK   77 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~   77 (290)
                      ++|||++| |+++|++ ++|++||||++.+..+  |++|.+|+.|++++|++...+  |....+|+|+||++++++.+++
T Consensus        60 v~G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~  137 (357)
T 2b5w_A           60 VLGHEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVR  137 (357)
T ss_dssp             ECCSEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEE
T ss_pred             ccCceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEE
Confidence            78999999 9999999 9999999999988888  999999999999999988766  4323579999999999999999


Q ss_pred             CCCCCChhhhhhhhhhHHHHHHHHhcCCCCC------CeEEEECCCHHHHHH-HHHH-HHCCCCeEEEEeCChh---HHH
Q 022879           78 LPDNVSLEEGAMCEPLSVGVHACRRANIGPE------TNVLIMGAGPIGLVT-MLAA-RAFGAPRIVIVDVDDY---RLS  146 (290)
Q Consensus        78 ~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~------~~vlI~Gag~vG~~a-i~la-~~~g~~~vv~v~~~~~---~~~  146 (290)
                      +|++++ ++|+++.+++|||++++.+++++|      ++|||+|+|++|+++ +|+| +.+|++.|++++++++   +.+
T Consensus       138 iP~~~~-~~aal~~~~~ta~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~  216 (357)
T 2b5w_A          138 IPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID  216 (357)
T ss_dssp             CCGGGS-TTGGGHHHHHHHHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred             CCCCcc-hhhhhhchHHHHHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence            999999 777766789999999977888999      999999999999999 9999 9999966999999998   999


Q ss_pred             HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhh-
Q 022879          147 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPA-  224 (290)
Q Consensus       147 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~-  224 (290)
                      +++++|++.+ +++  ++++.+ ++++   .+ ++|++||++|.+..+..++++++++|+++.+|... ....++...+ 
T Consensus       217 ~~~~lGa~~v-~~~--~~~~~~-i~~~---~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~  288 (357)
T 2b5w_A          217 IIEELDATYV-DSR--QTPVED-VPDV---YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFH  288 (357)
T ss_dssp             HHHHTTCEEE-ETT--TSCGGG-HHHH---SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHH
T ss_pred             HHHHcCCccc-CCC--ccCHHH-HHHh---CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHh
Confidence            9999999988 754  356666 6554   34 89999999998768899999999999999999765 4445555566 


Q ss_pred             ---hccCcEEEEeeec-CCcHHHHHHHHHcC--CCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          225 ---AVREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       225 ---~~~~~~i~~~~~~-~~~l~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                         +.+++++.+++.. .++++++++++++|  ++ +.+.++++|++  +++++|++.+   ...+|+|+++
T Consensus       289 ~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l--~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          289 REMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWF-LEDLVTGVHPL--SEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             HHHHHTTCEEEECCCCCHHHHHHHHHHHHHSCHHH-HHHHEEEEEEG--GGGGGGGCCS---TTCCEEEEEC
T ss_pred             HHHHhCCeEEEEeccCCHHHHHHHHHHHHhCchhh-hhhhcceeecH--HHHHHHHHHh---CCCceEEEEe
Confidence               7899999998765 57899999999999  84 47788899999  9999999988   3578999975

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.4e-46  Score=324.92  Aligned_cols=273  Identities=24%  Similarity=0.347  Sum_probs=235.0

Q ss_pred             ccccceeEEEEEeCCCCC-CCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCC-cccc-----CCCCCcccceeEeecCC
Q 022879            2 VIGHECAGVIEKVGSEVK-TLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEM-KFFA-----TPPVHGSLANQVVHPAD   73 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~g~~~e~~~v~~~   73 (290)
                      ++|||++|+|+++|++|+ +|++||||++.+ ..+|++|.+|+.|++++|++. ..++     +...+|+|+||++++++
T Consensus        65 v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~  144 (360)
T 1piw_A           65 VVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEH  144 (360)
T ss_dssp             ECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGG
T ss_pred             ccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchh
Confidence            789999999999999999 999999996654 468999999999999999976 2331     12457999999999999


Q ss_pred             ceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 022879           74 LCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  152 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg  152 (290)
                      .++++|+++++++||.+ ..+.|||+++..+++++|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++++|
T Consensus       145 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lG  223 (360)
T 1piw_A          145 FVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMG  223 (360)
T ss_dssp             GEEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHT
T ss_pred             heEECCCCCCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcC
Confidence            99999999999999877 478899999988899999999999999999999999999999 5999999999999999999


Q ss_pred             CCEEEecCCCcc-cHHHHHHHHHHHhCCCccEEEEccCC--HHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhccC
Q 022879          153 ADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVRE  228 (290)
Q Consensus       153 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~  228 (290)
                      ++.++++..  + ++.+.+       ..++|++||++|.  +..+..++++++++|+++.+|.... . .++...++.++
T Consensus       224 a~~v~~~~~--~~~~~~~~-------~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~  293 (360)
T 1piw_A          224 ADHYIATLE--EGDWGEKY-------FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKA  293 (360)
T ss_dssp             CSEEEEGGG--TSCHHHHS-------CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBS
T ss_pred             CCEEEcCcC--chHHHHHh-------hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCC
Confidence            999988542  3 443322       1479999999997  5678889999999999999997554 3 45666678899


Q ss_pred             cEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhh--HHHHHHHHhcCCCceeEEEeC
Q 022879          229 VDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE--VEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       229 ~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +++.+.+.. .++++++++++++|++  ++.+ ++|++  ++  +++|++.+.+++..+|+|+++
T Consensus       294 ~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i-~~~~l--~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          294 VSISYSALGSIKELNQLLKLVSEKDI--KIWV-ETLPV--GEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             CEEEECCCCCHHHHHHHHHHHHHTTC--CCCE-EEEES--SHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             eEEEEEecCCHHHHHHHHHHHHhCCC--cceE-EEEec--cHhHHHHHHHHHHCCCCceEEEEec
Confidence            999998765 5679999999999998  4556 88999  99  999999999887789999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-45  Score=316.11  Aligned_cols=278  Identities=22%  Similarity=0.311  Sum_probs=241.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|++|++|++||||++.+.. .|++|.+|+.|++++|++....|. ..+|+|+||++++++.++++|+
T Consensus        63 v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~  141 (347)
T 2hcy_A           63 VGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADAVQAAHIPQ  141 (347)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTT-TBCCSSBSEEEEETTTSEEECT
T ss_pred             ccCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccccc-CCCCcceeEEEeccccEEECCC
Confidence            68999999999999999999999999987654 599999999999999998876663 5679999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           81 NVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ++++++||.++ .+.|||++++..+++++++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.+++
T Consensus       142 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d  220 (347)
T 2hcy_A          142 GTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFID  220 (347)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEE
T ss_pred             CCCHHHHHHHhhhHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEe
Confidence            99999998774 7789999998888999999999998 9999999999999999 7889988999999999999988887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +.. .+++.+.+++..  .+ ++|++||++|.+..+..+++.|+++|+++.+|... ....++...++.+++++.+++..
T Consensus       221 ~~~-~~~~~~~~~~~~--~~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  296 (347)
T 2hcy_A          221 FTK-EKDIVGAVLKAT--DG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVG  296 (347)
T ss_dssp             TTT-CSCHHHHHHHHH--TS-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCC
T ss_pred             cCc-cHhHHHHHHHHh--CC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCC
Confidence            542 356777776653  34 89999999998778899999999999999999754 23345555677899999998765


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       ..+++++++++++|++++  . .++|++  +++++|++.+.+++..+|+|+++
T Consensus       297 ~~~~~~~~~~l~~~g~l~~--~-~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          297 NRADTREALDFFARGLVKS--P-IKVVGL--STLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             CHHHHHHHHHHHHTTSCCC--C-EEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             CHHHHHHHHHHHHhCCCcc--c-eEEEcH--HHHHHHHHHHHcCCcceeEEEec
Confidence             567999999999999954  3 468888  99999999999887789999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=6.8e-45  Score=314.56  Aligned_cols=272  Identities=23%  Similarity=0.310  Sum_probs=236.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCC---CccccCCCCCcccceeEeecCCceEE
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE---MKFFATPPVHGSLANQVVHPADLCFK   77 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~e~~~v~~~~~~~   77 (290)
                      +++|||++|+|+++|++|++|++||||++.+..      +|..+. ++|..   .....+...+|+|+||++++++.+++
T Consensus        85 ~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  157 (363)
T 3uog_A           85 FVPASDMSGVVEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVA  157 (363)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEE
T ss_pred             cCcccceEEEEEEECCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCCcceeEEEechHHeEE
Confidence            479999999999999999999999999987543      677788 88873   22211234679999999999999999


Q ss_pred             CCCCCChhhhhhhh-hhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           78 LPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        78 ~P~~~~~~~aa~~~-~~~ta~~~l-~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +|+++++++||.++ .+.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++++|++.
T Consensus       158 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  236 (363)
T 3uog_A          158 APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADH  236 (363)
T ss_dssp             CCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCE
Confidence            99999999999875 788999999 45899999999999999999999999999999 7999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++  ...+++.+.+++++  .+.++|++|||+|. ..+..++++++++|+++.+|.... ...++...++.+++++.+.
T Consensus       237 vi~--~~~~~~~~~v~~~~--~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  311 (363)
T 3uog_A          237 GIN--RLEEDWVERVYALT--GDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI  311 (363)
T ss_dssp             EEE--TTTSCHHHHHHHHH--TTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEEC
T ss_pred             EEc--CCcccHHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEE
Confidence            987  34467888887764  56689999999995 688999999999999999997554 3466777788999999998


Q ss_pred             eec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.. .+.++++++++++|++  ++.++++|++  +++++|++.+.+++ .||+||+|
T Consensus       312 ~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          312 SVGHRRALEDLVGAVDRLGL--KPVIDMRYKF--TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CCCCHHHHHHHHHHHHHHTC--CCCEEEEEEG--GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             ecCCHHHHHHHHHHHHcCCC--ccceeeEEcH--HHHHHHHHHHHcCC-CccEEEeC
Confidence            876 6789999999999988  7788899999  99999999999988 99999986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.9e-45  Score=317.40  Aligned_cols=274  Identities=20%  Similarity=0.333  Sum_probs=232.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPAD   73 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~   73 (290)
                      +++|||++|+|+++|++|++|++||||++.+. .+|++|.+|+.+++++|+...+..      +...+|+|+||++++++
T Consensus        65 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~  144 (357)
T 2cf5_A           65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQK  144 (357)
T ss_dssp             BCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGG
T ss_pred             eecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechh
Confidence            37999999999999999999999999987654 479999999999999997654321      12357999999999999


Q ss_pred             ceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCC-CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H
Q 022879           74 LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E  150 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~-~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~  150 (290)
                      .++++|+++++++||.++ .+.|||+++...+++ +|++|||+|+|++|++++|+|+.+|+ .|+++++++++.+.++ +
T Consensus       145 ~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~  223 (357)
T 2cf5_A          145 FVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQD  223 (357)
T ss_dssp             GEEECCSSCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTT
T ss_pred             hEEECcCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Confidence            999999999999999774 778999999888888 99999999999999999999999999 6899999999998887 8


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc-ccchhhhccCc
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREV  229 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~  229 (290)
                      +|++.++++..  .   +.++++    ..++|++||++|.+..+..++++++++|+++.+|....... ++.. ++.+++
T Consensus       224 lGa~~vi~~~~--~---~~~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~  293 (357)
T 2cf5_A          224 LGADDYVIGSD--Q---AKMSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRK  293 (357)
T ss_dssp             SCCSCEEETTC--H---HHHHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTC
T ss_pred             cCCceeecccc--H---HHHHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCcc
Confidence            99999887542  1   233332    24799999999976578899999999999999996554333 4445 788999


Q ss_pred             EEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          230 DVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       230 ~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++.+++.. .++++++++++++|+++  +.+ ++|++  +++++|++.+.+++..+|+|+++
T Consensus       294 ~i~g~~~~~~~~~~~~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          294 VITGSFIGSMKETEEMLEFCKEKGLS--SII-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             EEEECCSCCHHHHHHHHHHHHHTTCC--CCE-EEEEG--GGHHHHHHHHHTTCSSSEEEEET
T ss_pred             EEEEEccCCHHHHHHHHHHHHcCCCC--Cce-EEEeH--HHHHHHHHHHHCCCCceEEEEeC
Confidence            99998765 56789999999999994  444 68888  99999999999988889999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.3e-44  Score=313.06  Aligned_cols=275  Identities=22%  Similarity=0.333  Sum_probs=232.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPAD   73 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~   73 (290)
                      +++|||++|+|+++|++|++|++||||++.+. .+|++|.+|+.++.++|+......      +...+|+|+||++++++
T Consensus        72 ~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~  151 (366)
T 1yqd_A           72 LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANER  151 (366)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGG
T ss_pred             EecccceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchh
Confidence            37999999999999999999999999997654 589999999999999997654321      11357999999999999


Q ss_pred             ceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCC-CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H
Q 022879           74 LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E  150 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~-~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~  150 (290)
                      .++++|+++++++||.++ .+.|||+++...+++ +|++|||+|+|++|++++|+|+.+|+ .|+++++++++.+.++ +
T Consensus       152 ~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~  230 (366)
T 1yqd_A          152 YIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKN  230 (366)
T ss_dssp             GCEECCTTSCTTTTGGGGTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHT
T ss_pred             hEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh
Confidence            999999999999999774 778999999887888 99999999999999999999999999 6899999999988876 8


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcE
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  230 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  230 (290)
                      +|++.++++..  .   +.++++   . .++|++||++|.+..+..+++.++++|+++.+|.......++...++.++++
T Consensus       231 lGa~~v~~~~~--~---~~~~~~---~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  301 (366)
T 1yqd_A          231 FGADSFLVSRD--Q---EQMQAA---A-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKI  301 (366)
T ss_dssp             SCCSEEEETTC--H---HHHHHT---T-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCE
T ss_pred             cCCceEEeccC--H---HHHHHh---h-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcE
Confidence            99999887542  2   234333   2 4799999999975567899999999999999997654445566667889999


Q ss_pred             EEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          231 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       231 i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+.+.. .++++++++++++|++++  .+ ++|++  +++++|++.+.+++..+|+|+++
T Consensus       302 i~g~~~~~~~~~~~~~~l~~~g~l~~--~~-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          302 VAGSGIGGMKETQEMIDFAAKHNITA--DI-EVIST--DYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             EEECCSCCHHHHHHHHHHHHHTTCCC--CE-EEECG--GGHHHHHHHHHTTCCSSEEEECH
T ss_pred             EEEecCCCHHHHHHHHHHHHcCCCCC--ce-EEEcH--HHHHHHHHHHHcCCcceEEEEEc
Confidence            9998765 567899999999999944  44 67888  99999999999988889999863

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1.7e-44  Score=320.81  Aligned_cols=280  Identities=21%  Similarity=0.223  Sum_probs=242.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      |+|||++|+|+++|++|++|++||+|++.+. .|..|..|..+..++|++...+|....+|+|+||+++++++++++|++
T Consensus       120 v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~~P~~  198 (456)
T 3krt_A          120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDH  198 (456)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEECCTT
T ss_pred             cccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCcccceEEechHHeeECCCC
Confidence            7999999999999999999999999998654 688899999999999999999887666799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh---cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~---~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++++||.++ .+.|||+++..   +++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.+
T Consensus       199 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~v  277 (456)
T 3krt_A          199 LSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAI  277 (456)
T ss_dssp             SCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEE
Confidence            9999999774 78899999853   68999999999998 9999999999999999 67777899999999999999999


Q ss_pred             EecCCCcc---------------cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Ccccc
Q 022879          157 VKVSTNLQ---------------DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVP  220 (290)
Q Consensus       157 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~  220 (290)
                      +++...+.               ++.+.++++  +.+.++|++||++|+ ..+..++++++++|+++.+|.... ...++
T Consensus       278 i~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~--t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~  354 (456)
T 3krt_A          278 IDRNAEGYRFWKDENTQDPKEWKRFGKRIREL--TGGEDIDIVFEHPGR-ETFGASVFVTRKGGTITTCASTSGYMHEYD  354 (456)
T ss_dssp             EETTTTTCCSEEETTEECHHHHHHHHHHHHHH--HTSCCEEEEEECSCH-HHHHHHHHHEEEEEEEEESCCTTCSEEEEE
T ss_pred             EecCcCcccccccccccchHHHHHHHHHHHHH--hCCCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEEecCCCcccccC
Confidence            98654221               123445444  356799999999997 789999999999999999996543 33566


Q ss_pred             chhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          221 LTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       221 ~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ...++.+.+++.|++.. ..++.++++++++|++  ++.++++|++  +++++|++.+.+++..||+||.+
T Consensus       355 ~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~eA~~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          355 NRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTLSKVYSL--EDTGQAAYDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             HHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEES
T ss_pred             HHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHHhCCCCCcEEEEe
Confidence            66788899999998765 4567789999999999  5778899999  99999999999998999998864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.1e-44  Score=319.86  Aligned_cols=279  Identities=22%  Similarity=0.247  Sum_probs=238.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+...|+.|+.| .+..++|.....+|....+|+|+||++++++.++++|++
T Consensus       112 v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~-~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~iP~~  190 (447)
T 4a0s_A          112 VLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPAT-HGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAH  190 (447)
T ss_dssp             ECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGG-GTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGEEECCTT
T ss_pred             ccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccccc-ccccccccccccccccCCCCceeeeeecCHHHcEECCCC
Confidence            7899999999999999999999999999988888777654 578999999988887655799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH---hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           82 VSLEEGAMCE-PLSVGVHACR---RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~---~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++++||.++ .++|||+++.   .+++++|++|||+|+ |++|++++|+++.+|+ .++++++++++.++++++|++.+
T Consensus       191 ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~  269 (447)
T 4a0s_A          191 LTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLV  269 (447)
T ss_dssp             SCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEE
Confidence            9999999774 7789999984   378999999999998 9999999999999999 67788899999999999999988


Q ss_pred             EecCCCc----------------ccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Cccc
Q 022879          157 VKVSTNL----------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTV  219 (290)
Q Consensus       157 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  219 (290)
                      +++...+                ..+.+.++++   .+.++|++||++|. ..+..++.+++++|+++.+|.... ...+
T Consensus       270 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~  345 (447)
T 4a0s_A          270 INRAELGITDDIADDPRRVVETGRKLAKLVVEK---AGREPDIVFEHTGR-VTFGLSVIVARRGGTVVTCGSSSGYLHTF  345 (447)
T ss_dssp             EEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHH---HSSCCSEEEECSCH-HHHHHHHHHSCTTCEEEESCCTTCSEEEE
T ss_pred             EecccccccccccccccccchhhhHHHHHHHHH---hCCCceEEEECCCc-hHHHHHHHHHhcCCEEEEEecCCCccccc
Confidence            8753211                0113344443   36789999999997 688999999999999999996543 3355


Q ss_pred             cchhhhccCcEEEEeeec-CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          220 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       220 ~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +...++.+.+++.+.+.. ..++.++++++++|++  ++.++++|++  +++++|++.+.+++..||+||.+
T Consensus       346 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          346 DNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             EHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             CHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHhcCCCceEEEEEe
Confidence            666778899999998766 4568899999999999  6788899999  99999999999998899998864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=4.8e-45  Score=315.94  Aligned_cols=272  Identities=20%  Similarity=0.336  Sum_probs=235.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecCCceEECC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      ++|||++|+|++  ++ ++|++||||++.+..+|++|.+|+.|++++|++...+  |....+|+|+||++++++.++++|
T Consensus        63 v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP  139 (366)
T 2cdc_A           63 VLGHEAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIP  139 (366)
T ss_dssp             ECCSEEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEEC
T ss_pred             cCCcceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECc
Confidence            789999999999  77 8999999999999999999999999999999987765  432257999999999999999999


Q ss_pred             CCCChhhhhhhhhhHHHHHHHH-----hcCCC--C-------CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh---
Q 022879           80 DNVSLEEGAMCEPLSVGVHACR-----RANIG--P-------ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD---  142 (290)
Q Consensus        80 ~~~~~~~aa~~~~~~ta~~~l~-----~~~~~--~-------~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~---  142 (290)
                      ++++ ++|+++.+++|||+++.     .++++  +       |++|||+|+|++|++++|+++.+|+ .|+++++++   
T Consensus       140 ~~l~-~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~  217 (366)
T 2cdc_A          140 KSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTE  217 (366)
T ss_dssp             GGGT-TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCH
T ss_pred             CCcc-hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccch
Confidence            9999 88877679999999997     77888  8       9999999999999999999999999 799999988   


Q ss_pred             hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHH-HHHHHHhccCCEEEEeccCCCC-cccc
Q 022879          143 YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVGMGHHE-MTVP  220 (290)
Q Consensus       143 ~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~  220 (290)
                      ++.++++++|++.+ + .  + ++.+.+.+ +  . .++|++||++|.+..+ ..+++.++++|+++.+|..... ..++
T Consensus       218 ~~~~~~~~~ga~~v-~-~--~-~~~~~~~~-~--~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~  288 (366)
T 2cdc_A          218 VEQTVIEETKTNYY-N-S--S-NGYDKLKD-S--V-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLD  288 (366)
T ss_dssp             HHHHHHHHHTCEEE-E-C--T-TCSHHHHH-H--H-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEE
T ss_pred             HHHHHHHHhCCcee-c-h--H-HHHHHHHH-h--C-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccC
Confidence            89999999999877 5 3  2 55556655 3  3 6899999999986677 8999999999999999975543 4555


Q ss_pred             chh---hhccCcEEEEeeec-CCcHHHHHHHHHcCCCC----CCCceeeEeeCChhhHHHHHHH--HhcCCCceeEEEeC
Q 022879          221 LTP---AAVREVDVVGVFRY-KNTWPLCLELLRSGKID----VKPLVTHRFGFSQKEVEEAFET--SARGGTAIKVMFNL  290 (290)
Q Consensus       221 ~~~---~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~a~~~--~~~~~~~gk~vl~~  290 (290)
                      ...   ++.+++++.+.... .++++++++++++|+++    +++.++++|++  +++++|++.  ++ +...+|+||++
T Consensus       289 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l--~~~~~A~~~l~~~-~~~~gKvvi~~  365 (366)
T 2cdc_A          289 YKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI--NDEKELLKVLREK-EHGEIKIRILW  365 (366)
T ss_dssp             HHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET--TCHHHHHHHHHCC-CTTCCEEEEEC
T ss_pred             hhhhHHHHhcCcEEEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH--HHHHHHHHHHhhh-cCCceEEEEec
Confidence            556   78899999998765 67899999999999965    57888899999  999999999  55 55789999975

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.3e-41  Score=292.86  Aligned_cols=251  Identities=23%  Similarity=0.352  Sum_probs=220.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++.                            ..+|+|+||+.++++.++++|+
T Consensus        87 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~~P~  138 (353)
T 4dup_A           87 PILGLELSGEIVGVGPGVSGYAVGDKVCGL----------------------------ANGGAYAEYCLLPAGQILPFPK  138 (353)
T ss_dssp             SSSCCEEEEEEEEECTTCCSCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCT
T ss_pred             CccccccEEEEEEECCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEEcHHHcEeCCC
Confidence            479999999999999999999999999863                            2359999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHH-HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ .+++|||+++ +.+++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++.++++++|++.++
T Consensus       139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~  217 (353)
T 4dup_A          139 GYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGI  217 (353)
T ss_dssp             TCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence            9999999866 5889999999 4589999999999965 9999999999999999 699999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-cc-ccchhhhccCcEEEEee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVF  235 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~  235 (290)
                      +++  ++++.+.+++++   +.++|++|||+|. ..+..++++++++|+++.+|..... .. ++...++.+++++.+..
T Consensus       218 ~~~--~~~~~~~~~~~~---~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~  291 (353)
T 4dup_A          218 NYR--SEDFAAVIKAET---GQGVDIILDMIGA-AYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGST  291 (353)
T ss_dssp             ETT--TSCHHHHHHHHH---SSCEEEEEESCCG-GGHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECC
T ss_pred             eCC--chHHHHHHHHHh---CCCceEEEECCCH-HHHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEe
Confidence            854  467777777763   6789999999997 5788999999999999999965433 23 67777889999999987


Q ss_pred             ec-CCc----------HHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          236 RY-KNT----------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       236 ~~-~~~----------l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .. ...          ++++++++++|++  ++.++++|++  +++++|++.+.+++..||+||++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          292 MRPRTAEEKRAIRDDLLSEVWPLLEAGTV--APVIHKVFAF--EDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             STTSCHHHHHHHHHHHHHHTHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHCCCc--cCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            65 222          7889999999998  6788899999  99999999999998899999986

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=9.7e-41  Score=286.84  Aligned_cols=252  Identities=19%  Similarity=0.232  Sum_probs=215.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++...                         ...+|+|+||++++++.++++|+
T Consensus        61 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~  115 (346)
T 3fbg_A           61 RVLGFDAIGVVESVGNEVTMFNQGDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPK  115 (346)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCS
T ss_pred             cCcCCccEEEEEEeCCCCCcCCCCCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCC
Confidence            47999999999999999999999999997421                         23469999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH-hcCCC------CCCeEEEEC-CCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR-RANIG------PETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  151 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~-~~~~~------~~~~vlI~G-ag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  151 (290)
                      ++++++||.++ .+.|||+++. .++++      +|++|||+| +|++|++++|+++.+|+ +|+++++++++.++++++
T Consensus       116 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l  194 (346)
T 3fbg_A          116 NISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM  194 (346)
T ss_dssp             SSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH
T ss_pred             CCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence            99999999885 6668999985 47787      999999995 59999999999999999 799999999999999999


Q ss_pred             CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEE
Q 022879          152 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  231 (290)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i  231 (290)
                      |++.+++++   +++.+.+++.   .+.++|++|||+|.+..+..++++++++|+++.++...  ..++...+..+++++
T Consensus       195 Ga~~vi~~~---~~~~~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~  266 (346)
T 3fbg_A          195 GADIVLNHK---ESLLNQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSF  266 (346)
T ss_dssp             TCSEEECTT---SCHHHHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEE
T ss_pred             CCcEEEECC---ccHHHHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEE
Confidence            999998754   3666666554   56789999999998777899999999999999987432  345566677888999


Q ss_pred             EEeeec-------------CCcHHHHHHHHHcCCCCCCCceeeEe---eCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          232 VGVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       232 ~~~~~~-------------~~~l~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+.+..             .+.++++++++++|++  ++.++++|   ++  +++++|++.+.+++..||+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l--~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          267 SHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTT--ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             EECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCH--HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEEecccccchhhHHHHHHHHHHHHHHHHCCCE--ECCccceecCCCH--HHHHHHHHHHhcCCcceEEEEec
Confidence            886543             2458889999999998  67777777   56  99999999999999999999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.2e-40  Score=285.06  Aligned_cols=251  Identities=24%  Similarity=0.315  Sum_probs=217.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeec-CCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~-~~~~~~~P   79 (290)
                      +++|||++|+|+++|+++++|++||||++.                             .+|+|+||+.++ ++.++++|
T Consensus        65 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P  115 (334)
T 3qwb_A           65 YVLGREASGTVVAKGKGVTNFEVGDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLP  115 (334)
T ss_dssp             EECCSEEEEEEEEECTTCCSCCTTCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECC
T ss_pred             CccccceEEEEEEECCCCCCCCCCCEEEEe-----------------------------eCCcceEEEEecCcceEEECC
Confidence            379999999999999999999999999863                             259999999999 99999999


Q ss_pred             CCCChhh---hhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           80 DNVSLEE---GAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        80 ~~~~~~~---aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      +++++++   |+.+ ..+.|||+++.. .++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++.++++++|+
T Consensus       116 ~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga  194 (334)
T 3qwb_A          116 KGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGA  194 (334)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC
T ss_pred             CCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC
Confidence            9999999   6655 578899999876 68999999999985 9999999999999999 69999999999999999999


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEE
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVV  232 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~  232 (290)
                      +.+++++  ++++.+.+++++  .+.++|++|||+|. ..+..++++++++|+++.+|..... ..++...+..+++++.
T Consensus       195 ~~~~~~~--~~~~~~~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  269 (334)
T 3qwb_A          195 EYLINAS--KEDILRQVLKFT--NGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLV  269 (334)
T ss_dssp             SEEEETT--TSCHHHHHHHHT--TTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEE
T ss_pred             cEEEeCC--CchHHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEE
Confidence            9998854  467777777653  46689999999997 6889999999999999999975543 3566677888999998


Q ss_pred             Eeeec---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          233 GVFRY---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +....         .+.++++++++++|++  ++.+++.|++  +++++|++.+.+++..||+|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          270 RPQLYGYIADPEEWKYYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             CCCGGGGSCSHHHHHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             EEEeccccCCHHHHHHHHHHHHHHHHCCCc--cCceeeEEcH--HHHHHHHHHHHhCCCceEEEEec
Confidence            75432         2345789999999999  4458889999  99999999999998999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=7.7e-41  Score=286.94  Aligned_cols=249  Identities=24%  Similarity=0.335  Sum_probs=211.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|++++ |++||||++.                            ..+|+|+||+.++++.++++|+
T Consensus        80 ~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~  130 (342)
T 4eye_A           80 FVPGIETAGVVRSAPEGSG-IKPGDRVMAF----------------------------NFIGGYAERVAVAPSNILPTPP  130 (342)
T ss_dssp             BCCCSEEEEEEEECCTTSS-CCTTCEEEEE----------------------------CSSCCSBSEEEECGGGEEECCT
T ss_pred             CccceeEEEEEEEECCCCC-CCCCCEEEEe----------------------------cCCCcceEEEEEcHHHeEECCC
Confidence            3799999999999999999 9999999974                            2369999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ .+++|||+++. .+++++|++|||+|+ |++|++++|+++.+|+ .|+++++++++.++++++|++.++
T Consensus       131 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~  209 (342)
T 4eye_A          131 QLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVL  209 (342)
T ss_dssp             TSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEE
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEe
Confidence            9999999755 69999999994 588999999999998 9999999999999999 799999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEeee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFR  236 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~  236 (290)
                      +++   +++.+.+++++  .+.++|++|||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.+...
T Consensus       210 ~~~---~~~~~~v~~~~--~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  283 (342)
T 4eye_A          210 PLE---EGWAKAVREAT--GGAGVDMVVDPIGG-PAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAW  283 (342)
T ss_dssp             ESS---TTHHHHHHHHT--TTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCH
T ss_pred             cCc---hhHHHHHHHHh--CCCCceEEEECCch-hHHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEeh
Confidence            754   67777776653  45689999999997 5788999999999999999965432 34556667889999999864


Q ss_pred             c----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          237 Y----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       237 ~----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .          .+.++.+++++++| +  ++.++++|++  +++++|++.+.+++..||+||++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          284 GEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPL--SEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            2          24688999999999 6  7788899999  99999999999998999999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.5e-40  Score=281.96  Aligned_cols=253  Identities=26%  Similarity=0.276  Sum_probs=214.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||+...                           ..+|+|+||+.++++.++++|+
T Consensus        59 ~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~  111 (325)
T 3jyn_A           59 SGLGAEGAGVVEAVGDEVTRFKVGDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLAD  111 (325)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCceeEEEEEEECCCCCCCCCCCEEEEec---------------------------CCCccccceEEecHHHeEECCC
Confidence            3789999999999999999999999998632                           2469999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ ....|+|+++.. +++++|++|||+|+ |++|++++|+++.+|+ .|+++++++++.++++++|++.++
T Consensus       112 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~  190 (325)
T 3jyn_A          112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETI  190 (325)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            9999999976 477889998865 78999999999985 9999999999999999 799999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccchhhhcc-CcEEEEee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVR-EVDVVGVF  235 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~~~~  235 (290)
                      ++.  ++++.+.+.+++  .+.++|++|||+|. ..+..++++++++|+++.+|...... .++...+..+ .+.+.+..
T Consensus       191 ~~~--~~~~~~~~~~~~--~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (325)
T 3jyn_A          191 DYS--HEDVAKRVLELT--DGKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPT  265 (325)
T ss_dssp             ETT--TSCHHHHHHHHT--TTCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCC
T ss_pred             eCC--CccHHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeee
Confidence            854  467777777653  56789999999997 68899999999999999999765432 4566666666 56665432


Q ss_pred             e----c-CC----cHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          236 R----Y-KN----TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       236 ~----~-~~----~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .    . .+    .++++++++++|++++  .++++|++  +++++|++.+.+++..||+||.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          266 LGSYANNAQNLQTMADELFDMLASGKLKV--DGIEQYAL--KDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHSCSTTHHHHHHHHHHHHHHTTSSCC--CCCEEEEG--GGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             eeeecCCHHHHHHHHHHHHHHHHCCCeeC--ccccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            1    1 23    3458999999999954  47789999  99999999999999999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.1e-40  Score=285.20  Aligned_cols=253  Identities=19%  Similarity=0.265  Sum_probs=214.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|++|++|++||||+..+.                         ...+|+|+||++++++.++++|+
T Consensus        83 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~  137 (363)
T 4dvj_A           83 KVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGRKPK  137 (363)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEECCT
T ss_pred             CcccceeEEEEEEeCCCCCCCCCCCEEEEccC-------------------------CCCCccceEEEEeCHHHeeECCC
Confidence            37999999999999999999999999997421                         23469999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH-hcCCC-----CCCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHc
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR-RANIG-----PETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEI  151 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~-~~~~~-----~~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l  151 (290)
                      ++++++||.++ .+.|||+++. .++++     +|++|||+|+ |++|++++|+|+.+ |+ .|+++++++++.++++++
T Consensus       138 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~l  216 (363)
T 4dvj_A          138 TLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSL  216 (363)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHT
T ss_pred             CCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHc
Confidence            99999999885 6679999985 47777     8999999985 99999999999985 77 799999999999999999


Q ss_pred             CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEE
Q 022879          152 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  231 (290)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i  231 (290)
                      |++.++++.   +++.+.++++   .++++|++|||+|++..+..++++++++|+++.+|..   ..++...+..+++++
T Consensus       217 Gad~vi~~~---~~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i  287 (363)
T 4dvj_A          217 GAHHVIDHS---KPLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSI  287 (363)
T ss_dssp             TCSEEECTT---SCHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEE
T ss_pred             CCCEEEeCC---CCHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceE
Confidence            999998753   3566666553   5678999999999877889999999999999999642   345666778889999


Q ss_pred             EEeeec-------------CCcHHHHHHHHHcCCCCCCCceeeEe-eCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          232 VGVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       232 ~~~~~~-------------~~~l~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+....             .+.++++++++++|++  ++.+++++ .++++++++|++.+.+++..||+||++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          288 HHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             EECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             EEEEeeccccccCcchhhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            886542             2357899999999999  56677766 334499999999999998899999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.4e-40  Score=283.03  Aligned_cols=251  Identities=22%  Similarity=0.322  Sum_probs=213.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++....                       ..+.+|+|+||++++++.++++|+
T Consensus        65 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~g-----------------------~~~~~G~~aey~~v~~~~~~~~P~  121 (343)
T 3gaz_A           65 AILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGG-----------------------VGGLQGTHAQFAAVDARLLASKPA  121 (343)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECCS-----------------------STTCCCSSBSEEEEEGGGEEECCT
T ss_pred             cccCcceEEEEEEECCCCCCCCCCCEEEEEeCC-----------------------CCCCCcceeeEEEecHHHeeeCCC
Confidence            379999999999999999999999999874211                       122579999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHH-HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l-~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.++ .+.|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++ .++++.++++++|++. +
T Consensus       122 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i  198 (343)
T 3gaz_A          122 ALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-I  198 (343)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-E
T ss_pred             CCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-e
Confidence            99999999885 677999998 5689999999999995 9999999999999999 68888 8899999999999987 5


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +   ..+++.+.+++.+  .+.++|++|||+|+ ..+..++++++++|+++.+|...   .++...+..+++++.+.+..
T Consensus       199 ~---~~~~~~~~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~  269 (343)
T 3gaz_A          199 D---ASREPEDYAAEHT--AGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTL  269 (343)
T ss_dssp             E---TTSCHHHHHHHHH--TTSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTT
T ss_pred             c---cCCCHHHHHHHHh--cCCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEec
Confidence            5   3467777777653  56789999999997 68899999999999999998654   34566778899999997642


Q ss_pred             ------------CCcHHHHHHHHHcCCCCCCCcee-eEeeCChhhHHHHHHHHhcCCC----ceeEEEeC
Q 022879          238 ------------KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGT----AIKVMFNL  290 (290)
Q Consensus       238 ------------~~~l~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~----~gk~vl~~  290 (290)
                                  .+.++++++++++|++  ++.++ ++|++  +++++|++.+.+++.    .||+|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~l--~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          270 HTLLANEGLAHFGEMLREADALVQTGKL--APRLDPRTFSI--AEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HHHHHTCSHHHHHHHHHHHHHHHHTTCC--CCCBCSCCEET--TCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             cchhcccchHHHHHHHHHHHHHHHCCCc--ccCccCcEecH--HHHHHHHHHHHcCCCcccccceEEEEe
Confidence                        2578999999999999  56677 68999  999999999988844    68988875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=9.5e-41  Score=284.12  Aligned_cols=247  Identities=19%  Similarity=0.244  Sum_probs=207.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++.+..                        ...+|+|+||+.++++.++++|+
T Consensus        69 ~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~------------------------~~~~G~~aey~~v~~~~~~~iP~  124 (321)
T 3tqh_A           69 SGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGF------------------------PDHPCCYAEYVCASPDTIIQKLE  124 (321)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECST------------------------TTCCCCSBSEEEECGGGEEECCT
T ss_pred             CcccceeEEEEEEeCCCCCCCCCCCEEEEccCC------------------------CCCCCcceEEEEecHHHhccCCC
Confidence            379999999999999999999999999976432                        12469999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           81 NVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~G-ag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ++++++||.++ .+.|||++++.+++++|++|||+| +|++|++++|+|+.+|+ .++++. ++++.++++++|++.+++
T Consensus       125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~  202 (321)
T 3tqh_A          125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCIN  202 (321)
T ss_dssp             TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEe
Confidence            99999999885 667999999779999999999997 59999999999999999 677775 566789999999999988


Q ss_pred             cCCCccc-HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879          159 VSTNLQD-IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       159 ~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      ++.  ++ +.+.        -.++|++|||+|++ ....++++++++|+++.+|......  ....+..+++++.+....
T Consensus       203 ~~~--~~~~~~~--------~~g~D~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~  269 (321)
T 3tqh_A          203 YHE--EDFLLAI--------STPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQ  269 (321)
T ss_dssp             TTT--SCHHHHC--------CSCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCC
T ss_pred             CCC--cchhhhh--------ccCCCEEEECCCcH-HHHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecC
Confidence            643  33 3322        25799999999974 5589999999999999998543221  122456788888885433


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 --~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                        .++++++++++++|++  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       270 ~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          270 FNIEELHYLGKLVSEDKL--RIEISRIFQL--SEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             CCHHHHHHHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCc--ccccccEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence              5689999999999999  5578899999  99999999999999999999985

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-39  Score=278.16  Aligned_cols=252  Identities=24%  Similarity=0.380  Sum_probs=212.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++.+                           ..+|+|+||++++++.++++|+
T Consensus        89 ~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~  141 (351)
T 1yb5_A           89 YTPGSDVAGVIEAVGDNASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPE  141 (351)
T ss_dssp             BCCCSCEEEEEEEECTTCTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCT
T ss_pred             CcCCceeEEEEEEECCCCCCCCCCCEEEEeC---------------------------CCCCcceeEEEECHHHeEECCC
Confidence            3789999999999999999999999998742                           1359999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ .+++|||+++. .++++++++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++
T Consensus       142 ~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~  220 (351)
T 1yb5_A          142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVF  220 (351)
T ss_dssp             TSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEE
T ss_pred             CCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEE
Confidence            9999999877 48999999997 588999999999998 9999999999999999 699999999999999999999888


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      ++.  ++++.+.+.+..  .+.++|++||++|. ..+..++++++++|+++.+|... ...++...++.+++++.+....
T Consensus       221 d~~--~~~~~~~~~~~~--~~~~~D~vi~~~G~-~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~i~g~~~~  294 (351)
T 1yb5_A          221 NHR--EVNYIDKIKKYV--GEKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLF  294 (351)
T ss_dssp             ETT--STTHHHHHHHHH--CTTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGG
T ss_pred             eCC--CchHHHHHHHHc--CCCCcEEEEECCCh-HHHHHHHHhccCCCEEEEEecCC-CCccCHHHHHhCCcEEEEEEee
Confidence            754  356666666553  45589999999996 57889999999999999999642 3345556678899999997532


Q ss_pred             -------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHH-HhcCCCceeEEEeC
Q 022879          238 -------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFNL  290 (290)
Q Consensus       238 -------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~gk~vl~~  290 (290)
                             .+.++.+.+++++|++  ++.++++|++  +++++|++. +++++..||+|+++
T Consensus       295 ~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          295 SSTKEEFQQYAAALQAGMEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHTCC--CCCEEEEEEG--GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCc--cCccceEEcH--HHHHHHHHHHHHhCCCCeEEEEeC
Confidence                   2234456667788887  6778899999  999999998 66666789999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=8.7e-40  Score=280.32  Aligned_cols=252  Identities=18%  Similarity=0.220  Sum_probs=208.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||+..                            ..+|+|+||++++++.++++|+
T Consensus        64 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~  115 (340)
T 3gms_A           64 NIPGYEGVGIVENVGAFVSRELIGKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPD  115 (340)
T ss_dssp             BCCCSCCEEEEEEECTTSCGGGTTCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCT
T ss_pred             CcCCcceEEEEEEeCCCCCCCCCCCEEEec----------------------------CCCccceeEEEcCHHHeEECCC
Confidence            379999999999999999999999999863                            2469999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ ..+.|||+++. .+++++|++|||+|+ |++|++++|+++.+|+ .|+++++++++.++++++|++.++
T Consensus       116 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~  194 (340)
T 3gms_A          116 SIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVI  194 (340)
T ss_dssp             TSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEE
Confidence            9999999976 47778998884 589999999999998 6999999999999999 799999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhh-ccCcEEEEeee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA-VREVDVVGVFR  236 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~  236 (290)
                      ++.  ++++.+.+.+++  .+.++|++|||+|.+ .....+++++++|+++.+|..... .++...+. ...+.+.....
T Consensus       195 ~~~--~~~~~~~~~~~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~  268 (340)
T 3gms_A          195 DTS--TAPLYETVMELT--NGIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHL  268 (340)
T ss_dssp             ETT--TSCHHHHHHHHT--TTSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCH
T ss_pred             eCC--cccHHHHHHHHh--CCCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEe
Confidence            853  467777777653  566899999999974 556677999999999999965432 23322222 23444444321


Q ss_pred             c-----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCC-ceeEEEeC
Q 022879          237 Y-----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  290 (290)
Q Consensus       237 ~-----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vl~~  290 (290)
                      .           .+.++++++++++|++++.+ +++.|++  +++++|++.+.+++. .||+++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l--~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          269 RHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYEL--ADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEG--GGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             hhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeH--HHHHHHHHHHHhcCCCCCeEEEEE
Confidence            1           46789999999999996654 6789999  999999999999874 49999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.6e-39  Score=280.35  Aligned_cols=260  Identities=19%  Similarity=0.281  Sum_probs=210.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|++|++|++||||++.       |..|..+             ...+|+|+||++++++.++++|+
T Consensus        64 ~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~-------~~~~~~~-------------~~~~G~~aey~~v~~~~~~~~P~  123 (371)
T 3gqv_A           64 AFLGTDYAGTVVAVGSDVTHIQVGDRVYGA-------QNEMCPR-------------TPDQGAFSQYTVTRGRVWAKIPK  123 (371)
T ss_dssp             SCCCSEEEEEEEEECTTCCSCCTTCEEEEE-------CCTTCTT-------------CTTCCSSBSEEECCTTCEEECCT
T ss_pred             ccCccccEEEEEEeCCCCCCCCCCCEEEEe-------ccCCCCC-------------CCCCCcCcCeEEEchhheEECCC
Confidence            479999999999999999999999999864       3333332             23579999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH-h-cCC-----------CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR-R-ANI-----------GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL  145 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~-~-~~~-----------~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~  145 (290)
                      ++++++||.++ .+.|||+++. . .++           ++|++|||+|+ |++|++++|+|+.+|+ .|+++. +++|.
T Consensus       124 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~  201 (371)
T 3gqv_A          124 GLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNF  201 (371)
T ss_dssp             TCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGH
T ss_pred             CCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHH
Confidence            99999999885 6678999984 4 342           89999999998 9999999999999999 677774 78999


Q ss_pred             HHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHh-ccCCEEEEeccCCC----C--cc
Q 022879          146 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHH----E--MT  218 (290)
Q Consensus       146 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~----~--~~  218 (290)
                      ++++++|+++++++.  .+++.+.+++++   ++++|++|||+|++..+..+++++ +++|+++.+|....    .  ..
T Consensus       202 ~~~~~lGa~~vi~~~--~~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~  276 (371)
T 3gqv_A          202 DLAKSRGAEEVFDYR--APNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVT  276 (371)
T ss_dssp             HHHHHTTCSEEEETT--STTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEE
T ss_pred             HHHHHcCCcEEEECC--CchHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccc
Confidence            999999999999854  467877777763   335999999999988899999999 58999999995432    1  11


Q ss_pred             cc---chhhhccCcEEEEeeec----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCcee
Q 022879          219 VP---LTPAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK  285 (290)
Q Consensus       219 ~~---~~~~~~~~~~i~~~~~~----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk  285 (290)
                      ..   ...++.+++++.+.+..          .+.++++++++++|++++.+.+++.|++  +++++|++.+.+++..||
T Consensus       277 ~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l--~~~~~A~~~l~~g~~~Gk  354 (371)
T 3gqv_A          277 TDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF--DHIKQGMELVRKGELSGE  354 (371)
T ss_dssp             EEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECH--HHHHHHHHHHHTTCCSSC
T ss_pred             eeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcH--HHHHHHHHHHHcCCCceE
Confidence            11   12356678888776432          1234588899999999888777777888  999999999999988774


Q ss_pred             -EEEe
Q 022879          286 -VMFN  289 (290)
Q Consensus       286 -~vl~  289 (290)
                       +|++
T Consensus       355 kvvv~  359 (371)
T 3gqv_A          355 KLVVR  359 (371)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence             5554

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.8e-40  Score=284.60  Aligned_cols=258  Identities=17%  Similarity=0.228  Sum_probs=210.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC-
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~-   80 (290)
                      ++|||++|+|+++|++|++|++||||++.+                           ..+|+|+||++++++.++++|+ 
T Consensus        75 i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~  127 (364)
T 1gu7_A           75 PCGNEGLFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNP  127 (364)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCH
T ss_pred             ccCceeEEEEEEeCCCCCcCCCCCEEEecC---------------------------CCCCcchheEecCHHHeEEcCCc
Confidence            689999999999999999999999999742                           1359999999999999999998 


Q ss_pred             ----------CCChhhhhhhh-hhHHHHHHHHh-cCCCCC-CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH--
Q 022879           81 ----------NVSLEEGAMCE-PLSVGVHACRR-ANIGPE-TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--  144 (290)
Q Consensus        81 ----------~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~-~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~--  144 (290)
                                ++++++||.++ +++|||+++.. +++++| ++|||+|+ |++|++++|+|+.+|+ .++++.+++++  
T Consensus       128 ~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~  206 (364)
T 1gu7_A          128 AQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLD  206 (364)
T ss_dssp             HHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHH
T ss_pred             cccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccH
Confidence                      89999999885 78899999987 689999 99999998 9999999999999999 56666555443  


Q ss_pred             --HHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Ccccc
Q 022879          145 --LSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVP  220 (290)
Q Consensus       145 --~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~  220 (290)
                        .++++++|++.+++++.. .+++.+.+++++...+.++|++|||+|++.. ..++++++++|+++.+|.... ...++
T Consensus       207 ~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~  285 (364)
T 1gu7_A          207 EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMSFQPVTIP  285 (364)
T ss_dssp             HHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCSSCCEEEC
T ss_pred             HHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCCCCCcccC
Confidence              677899999999885421 1467777776642145689999999997544 488999999999999996442 33455


Q ss_pred             chhhhccCcEEEEeeec----------CCcHHHHHHHHHcCCCCCCCceeeEeeC-ChhhHHHHHHHHhcCCCceeEEEe
Q 022879          221 LTPAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGF-SQKEVEEAFETSARGGTAIKVMFN  289 (290)
Q Consensus       221 ~~~~~~~~~~i~~~~~~----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~gk~vl~  289 (290)
                      ...++.+++++.+.+..          .+.++++++++++|++++.+.  ..+++ +++++++|++.+.+++..||+|++
T Consensus       286 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~  363 (364)
T 1gu7_A          286 TSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKS--IETLYDGTKPLHELYQDGVANSKDGKQLIT  363 (364)
T ss_dssp             HHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCC--EEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             HHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccc--eEEecCchhhHHHHHHHHHhCCCCceEEEe
Confidence            56677899999997643          256899999999999966544  45666 347999999999888788999998


Q ss_pred             C
Q 022879          290 L  290 (290)
Q Consensus       290 ~  290 (290)
                      +
T Consensus       364 ~  364 (364)
T 1gu7_A          364 Y  364 (364)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.2e-40  Score=286.74  Aligned_cols=253  Identities=17%  Similarity=0.161  Sum_probs=210.5

Q ss_pred             CccccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|++| ++|++||||++...                         ...+|+|+||++++++.++++|
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------~~~~G~~aey~~v~~~~~~~iP  135 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------LSNWGSWAEYAVAEAAACIPLL  135 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------TSSCCSSBSEEEEEGGGEEECC
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------CCCCccceeeEeechHHeEECC
Confidence            479999999999999999 99999999997531                         2357999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCC-CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPE-TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~-~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++++++||.+ ..+.|||++++.++ +++ +++||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.+
T Consensus       136 ~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~  213 (349)
T 3pi7_A          136 DTVRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHV  213 (349)
T ss_dssp             TTCCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEE
T ss_pred             CCCCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            99999999976 47778998777766 666 78999855 9999999999999999 79999999999999999999999


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccc-hhhhccCcEEEEe
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPL-TPAAVREVDVVGV  234 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-~~~~~~~~~i~~~  234 (290)
                      ++++  ++++.+.+++++  .+.++|++|||+|. ..+..++++++++|+++.+|... ....++. ..++.+++++.+.
T Consensus       214 ~~~~--~~~~~~~v~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  288 (349)
T 3pi7_A          214 LNEK--APDFEATLREVM--KAEQPRIFLDAVTG-PLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGF  288 (349)
T ss_dssp             EETT--STTHHHHHHHHH--HHHCCCEEEESSCH-HHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEEC
T ss_pred             EECC--cHHHHHHHHHHh--cCCCCcEEEECCCC-hhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEE
Confidence            8854  467888887765  34579999999997 46688999999999999999543 3445666 7788899999998


Q ss_pred             eec----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +..          .+.++++++++++|++  ++.++++|++  +++++|++.+. +...||+||++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          289 WLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPL--AEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             CHHHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEH--HHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             EehhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcH--HHHHHHHHHHh-CCCCceEEEeC
Confidence            653          3567888899999999  6778899999  99999999554 45779999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.7e-39  Score=278.61  Aligned_cols=254  Identities=19%  Similarity=0.289  Sum_probs=212.1

Q ss_pred             CccccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|++| ++|++||||++.                            ...|+|+||+.++++.++++|
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP  132 (354)
T 2j8z_A           81 NILGLEASGHVAELGPGCQGHWKIGDTAMAL----------------------------LPGGGQAQYVTVPEGLLMPIP  132 (354)
T ss_dssp             SSSCSEEEEEEEEECSCC--CCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECC
T ss_pred             cccceeeEEEEEEECCCcCCCCCCCCEEEEe----------------------------cCCCcceeEEEeCHHHcEECC
Confidence            479999999999999999 999999999863                            135999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++++++||.+ .+++|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.+
T Consensus       133 ~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~  211 (354)
T 2j8z_A          133 EGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAG  211 (354)
T ss_dssp             TTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEE
T ss_pred             CCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence            99999999876 58899999994 588999999999986 9999999999999999 68999999999999999999988


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Cccccc-hhhhccCcEEEEe
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPL-TPAAVREVDVVGV  234 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~i~~~  234 (290)
                      +++.  ++++.+.+.+..  .+.++|++|||+|.+ .+..++++++++|+++.+|.... ...++. ..++.+++++.+.
T Consensus       212 ~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  286 (354)
T 2j8z_A          212 FNYK--KEDFSEATLKFT--KGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITS  286 (354)
T ss_dssp             EETT--TSCHHHHHHHHT--TTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEEC
T ss_pred             EecC--ChHHHHHHHHHh--cCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEE
Confidence            8754  456666666543  346899999999984 78899999999999999996543 234555 6678899999998


Q ss_pred             eecC-C----------cHHHHHHHHHcC-CCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRYK-N----------TWPLCLELLRSG-KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~~-~----------~l~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .... .          .++++++++++| ++.+++.++++|++  +++++|++.+.+++..+|+|+++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          287 LLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV--TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             CSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence            6531 1          124578888899 33337888999999  99999999999887889999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=8.3e-40  Score=281.35  Aligned_cols=249  Identities=22%  Similarity=0.331  Sum_probs=204.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++..                            .+|+|+||+.++++.++++|+
T Consensus        62 ~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~  113 (349)
T 4a27_A           62 LVPGFECSGIVEALGDSVKGYEIGDRVMAFV----------------------------NYNAWAEVVCTPVEFVYKIPD  113 (349)
T ss_dssp             BCCCSEEEEEEEEECTTCCSCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCT
T ss_pred             ccccceeEEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceEEEEecHHHeEECCC
Confidence            3799999999999999999999999999642                            359999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.++ ++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|...|+++. ++++.+.++ +|++.++
T Consensus       114 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~  191 (349)
T 4a27_A          114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLF  191 (349)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEE
Confidence            99999999875 88899999854 88999999999998 99999999999999755788776 667888888 9999988


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-----------------cccc
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-----------------MTVP  220 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~  220 (290)
                      +   ..+++.+.++++   .+.++|++|||+|++ .+..++++++++|+++.+|.....                 ..++
T Consensus       192 ~---~~~~~~~~~~~~---~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
T 4a27_A          192 D---RNADYVQEVKRI---SAEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVN  264 (349)
T ss_dssp             E---TTSCHHHHHHHH---CTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------C
T ss_pred             c---CCccHHHHHHHh---cCCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccC
Confidence            7   346777777765   356899999999974 568899999999999999964311                 1133


Q ss_pred             chhhhccCcEEEEeeec------------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEE
Q 022879          221 LTPAAVREVDVVGVFRY------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  288 (290)
Q Consensus       221 ~~~~~~~~~~i~~~~~~------------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl  288 (290)
                      ...++.++.++.+....            ++.++++++++++|++  ++.++++|++  +++++|++.+.+++..||+||
T Consensus       265 ~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~GKvvi  340 (349)
T 4a27_A          265 PIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWAL--EEVKEAMQRIHDRGNIGKLIL  340 (349)
T ss_dssp             HHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECG--GGHHHHHHHHHTTCCSSEEEE
T ss_pred             HHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc--cccccceECH--HHHHHHHHHHHhCCCCceEEE
Confidence            44567788888887642            4568999999999999  6788899999  999999999999989999999


Q ss_pred             eC
Q 022879          289 NL  290 (290)
Q Consensus       289 ~~  290 (290)
                      ++
T Consensus       341 ~~  342 (349)
T 4a27_A          341 DV  342 (349)
T ss_dssp             ET
T ss_pred             ec
Confidence            75

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.3e-39  Score=277.05  Aligned_cols=252  Identities=23%  Similarity=0.312  Sum_probs=215.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||+..+.                           .+|+|+||+.++++.++++|++
T Consensus        63 i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~  115 (333)
T 1wly_A           63 VVGFEAAAVVEEVGPGVTDFTVGERVCTCLP---------------------------PLGAYSQERLYPAEKLIKVPKD  115 (333)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECSS---------------------------SCCCSBSEEEEEGGGCEECCTT
T ss_pred             cccceeEEEEEEECCCCCCCCCCCEEEEecC---------------------------CCCcceeEEEecHHHcEeCCCC
Confidence            6899999999999999999999999976321                           2599999999999999999999


Q ss_pred             CChhh--hhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 022879           82 VSLEE--GAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        82 ~~~~~--aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  156 (290)
                      +++++  ||.+ .+++|||+++. .++++++++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.+
T Consensus       116 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~  194 (333)
T 1wly_A          116 LDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHT  194 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEE
T ss_pred             CChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            99999  7766 58999999997 488999999999997 9999999999999999 79999999999999999999988


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Cccccch-hhhccC--cEEE
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLT-PAAVRE--VDVV  232 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~  232 (290)
                      ++++  ++++.+.+.+..  .+.++|++||++|. ..+..++++++++|+++.+|.... ...++.. .++.++  +++.
T Consensus       195 ~d~~--~~~~~~~i~~~~--~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~  269 (333)
T 1wly_A          195 INYS--TQDFAEVVREIT--GGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITR  269 (333)
T ss_dssp             EETT--TSCHHHHHHHHH--TTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEEC
T ss_pred             EECC--CHHHHHHHHHHh--CCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEE
Confidence            8754  456666666653  35689999999998 688999999999999999996543 2345555 667788  8888


Q ss_pred             Eeeec--------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          233 GVFRY--------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       233 ~~~~~--------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      |.+..        .+.++++++++++|++  ++.++++|++  +++++|++.+.+++..+|+|+++
T Consensus       270 g~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          270 PALWHYMSNRSEIDEGSKCLFDAVKAGVL--HSSVAKTFPL--REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             CCGGGGSCSHHHHHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             EeehhhccCHHHHHHHHHHHHHHHHCCCc--CCCcceEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            86431        2368899999999998  5678899999  99999999999887889999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=5.6e-41  Score=284.87  Aligned_cols=242  Identities=24%  Similarity=0.323  Sum_probs=190.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++.+.                         ...+|+|+||+.++++.++++|+
T Consensus        60 ~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~  114 (315)
T 3goh_A           60 HVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPD  114 (315)
T ss_dssp             CCCCSEEEEEEEEECTTSCGGGTTCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCT
T ss_pred             CEeeeeeEEEEEEeCCCCCCCCCCCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcC
Confidence            47999999999999999999999999997542                         23479999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      ++++++||.+ .+++|||++++.+++++|++|||+|+|++|++++|+|+.+|+ +|++++ ++++.++++++|++.+++ 
T Consensus       115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~-  191 (315)
T 3goh_A          115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR-  191 (315)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES-
T ss_pred             CCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc-
Confidence            9999999866 689999999966899999999999999999999999999999 799998 899999999999998873 


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcccc--chhhhccCcEEEEeeec
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP--LTPAAVREVDVVGVFRY  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~i~~~~~~  237 (290)
                       +     .+.+       +.++|++|||+|++ ....++++++++|+++.+|........+  ...+.++.+++.+.+.+
T Consensus       192 -d-----~~~v-------~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (315)
T 3goh_A          192 -E-----PSQV-------TQKYFAIFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDF  257 (315)
T ss_dssp             -S-----GGGC-------CSCEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHH
T ss_pred             -C-----HHHh-------CCCccEEEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeeccccc
Confidence             1     1111       57899999999984 5588899999999999997543221211  11222333333333221


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ---------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                               .+.++++++++++|++  ++.++++|++  +++++|++.+.  +..||+|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          258 GDRQDWQILMQQGEALLTLIAQGKM--EIAAPDIFRF--EQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTSS--CCCCCEEEEG--GGHHHHHHHHH--HHCCCEEEES
T ss_pred             CChhHHHHHHHHHHHHHHHHHCCCc--ccccceEecH--HHHHHHHHHHH--hcCCcEEEEe
Confidence                     2357889999999998  6778899999  99999999988  5778999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=9.5e-40  Score=281.84  Aligned_cols=252  Identities=17%  Similarity=0.265  Sum_probs=203.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.+.                           .+|+|+||++++++.++++|++
T Consensus        87 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~  139 (357)
T 1zsy_A           87 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANA---------------------------GLGTWRTEAVFSEEALIQVPSD  139 (357)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESSS---------------------------CSCCSBSEEEEEGGGEEEECSS
T ss_pred             cccceEEEEEEEeCCCCCCCCCCCEEEEcCC---------------------------CCccceeEEecCHHHcEECCCC
Confidence            6899999999999999999999999997421                           2599999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~  155 (290)
                      +++++||.++ .+.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++.++++++++   ++.++++++|++.
T Consensus       140 l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~  219 (357)
T 1zsy_A          140 IPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEH  219 (357)
T ss_dssp             SCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSE
T ss_pred             CCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcE
Confidence            9999999885 67899999865 78999999999998 99999999999999996444444433   3578889999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhC-CCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEE
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG  233 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~  233 (290)
                      +++++.   ...+.+.+++  .+ .++|++|||+|++ ....++++++++|+++.+|... ....++...+..+++++.+
T Consensus       220 vi~~~~---~~~~~~~~~~--~~~~~~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  293 (357)
T 1zsy_A          220 VITEEE---LRRPEMKNFF--KDMPQPRLALNCVGGK-SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG  293 (357)
T ss_dssp             EEEHHH---HHSGGGGGTT--SSSCCCSEEEESSCHH-HHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEE
T ss_pred             EEecCc---chHHHHHHHH--hCCCCceEEEECCCcH-HHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEE
Confidence            887431   1111222221  22 2599999999974 5567899999999999998533 3345555667789999999


Q ss_pred             eeec-----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          234 VFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       234 ~~~~-----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+..           .+.++++++++++|+++  +.+.++|++  +++++|++.+.+++..+|+|+++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          294 FWLSQWKKDHSPDQFKELILTLCDLIRRGQLT--APACSQVPL--QDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             CCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSC--CCCEEEEEG--GGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             EEcchhcccCCHHHHHHHHHHHHHHHHcCCCc--CccceEEcH--HHHHHHHHHHHhCCCCCcEEEeC
Confidence            7542           24578899999999994  445588999  99999999999887788999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-39  Score=274.04  Aligned_cols=253  Identities=24%  Similarity=0.285  Sum_probs=212.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||.. +.                          ..+|+|+||+.++++.++++|+
T Consensus        59 ~v~G~E~~G~V~~vG~~v~~~~~GdrV~~-~g--------------------------~~~G~~aey~~v~~~~~~~iP~  111 (327)
T 1qor_A           59 SGLGTEAAGIVSKVGSGVKHIKAGDRVVY-AQ--------------------------SALGAYSSVHNIIADKAAILPA  111 (327)
T ss_dssp             BCCCSCEEEEEEEECTTCCSCCTTCEEEE-SC--------------------------CSSCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCceeEEEEEEECCCCCCCCCCCEEEE-CC--------------------------CCCceeeeEEEecHHHcEECCC
Confidence            37999999999999999999999999942 10                          1359999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ .+++|||+++. .++++++++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++
T Consensus       112 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~  190 (327)
T 1qor_A          112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVI  190 (327)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            9999998766 58899999997 588999999999986 9999999999999999 789999999999999999999888


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhcc-CcEEEEee
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVR-EVDVVGVF  235 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~  235 (290)
                      ++.  ++++.+.+.+.+  .+.++|++||++| ...+..++++++++|+++.+|..... ..++...++.+ .+++.+..
T Consensus       191 ~~~--~~~~~~~~~~~~--~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (327)
T 1qor_A          191 NYR--EEDLVERLKEIT--GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPS  265 (327)
T ss_dssp             ETT--TSCHHHHHHHHT--TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCC
T ss_pred             ECC--CccHHHHHHHHh--CCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccc
Confidence            754  456666665542  3457999999999 57889999999999999999965432 34566666777 77777543


Q ss_pred             e---------cCCcHHHHHHHHHcCCCCCCCcee--eEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          236 R---------YKNTWPLCLELLRSGKIDVKPLVT--HRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       236 ~---------~~~~l~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .         ..+.++++++++++|++  ++.++  ++|++  +++++|++.+.+++..+|+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          266 LQGYITTREELTEASNELFSLIASGVI--KVDVAEQQKYPL--KDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHCCSHHHHHHHHHHHHHHHHTTSS--CCCCCGGGEEEG--GGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHCCCc--ccccccCcEEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            2         13457899999999999  45677  88999  99999999999888889999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=3.3e-38  Score=273.93  Aligned_cols=252  Identities=22%  Similarity=0.308  Sum_probs=203.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|++|++|++||||++.+.                         ...+|+|+||++++++.++++|+
T Consensus        96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~  150 (375)
T 2vn8_A           96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP-------------------------PWKQGTLSEFVVVSGNEVSHKPK  150 (375)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECC-------------------------TTSCCSSBSEEEEEGGGEEECCT
T ss_pred             cccceeeeEEEEEeCCCCCCCCCCCEEEEecC-------------------------CCCCccceeEEEEcHHHeeeCCC
Confidence            37899999999999999999999999997532                         12369999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH-hcC----CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR-RAN----IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~-~~~----~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      ++++++||.++ .+.|||+++. .++    +++|++|||+|+ |++|++++|+|+.+|+ .|++++ ++++.++++++|+
T Consensus       151 ~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa  228 (375)
T 2vn8_A          151 SLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGA  228 (375)
T ss_dssp             TSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC
T ss_pred             CCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCC
Confidence            99999999885 6789999995 477    899999999995 9999999999999999 678776 6788999999999


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEeccCCCCc--c--ccc------h
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEM--T--VPL------T  222 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~--~~~------~  222 (290)
                      +.+++++  ++++.+.+.+     ..++|++|||+|.+ ..+..++++++++|+++.+|......  .  ++.      .
T Consensus       229 ~~v~~~~--~~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  301 (375)
T 2vn8_A          229 DDVIDYK--SGSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGV  301 (375)
T ss_dssp             SEEEETT--SSCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHH
T ss_pred             CEEEECC--chHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeeh
Confidence            9998854  3566555432     25799999999986 45678888999999999998643210  0  100      0


Q ss_pred             hhhc-------cCcEEEEeeec--CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          223 PAAV-------REVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       223 ~~~~-------~~~~i~~~~~~--~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .++.       +...+.+.+..  .+.++++++++++|++  ++.++++|++  +++++|++.+.+++..+|+|+++
T Consensus       302 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          302 TVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPF--SKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             hhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            1111       44455443322  3568999999999998  6778889999  99999999999887889999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.2e-39  Score=276.19  Aligned_cols=251  Identities=17%  Similarity=0.221  Sum_probs=207.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|  +++|++||||++.+..                     . +...+|+|+||+.++++.++++|+
T Consensus        59 ~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~~~---------------------~-g~~~~G~~aey~~v~~~~~~~iP~  114 (324)
T 3nx4_A           59 MIPGIDFAGTVHASE--DPRFHAGQEVLLTGWG---------------------V-GENHWGGLAERARVKGDWLVALPA  114 (324)
T ss_dssp             BCCCSEEEEEEEEES--STTCCTTCEEEEECTT---------------------B-TTTBCCSSBSEEEECGGGCEECCT
T ss_pred             ccccceeEEEEEEeC--CCCCCCCCEEEEcccc---------------------c-CCCCCCceeeEEecCHHHcEECCC
Confidence            379999999999998  6789999999975310                     0 123579999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH---hcCCCCCC-eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR---RANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD  154 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~---~~~~~~~~-~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  154 (290)
                      ++++++||.++ .+.|||++++   ..++++++ +|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++
T Consensus       115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~  193 (324)
T 3nx4_A          115 GLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGAN  193 (324)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCS
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCC
Confidence            99999999885 7778998874   35566633 4999998 9999999999999999 689999999999999999999


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEE
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVG  233 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~  233 (290)
                      +++++...  +.   ++++   .+.++|++||++|+ ..+..++++++++|+++.+|..... ..++...++.+++++.+
T Consensus       194 ~vi~~~~~--~~---~~~~---~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g  264 (324)
T 3nx4_A          194 RILSRDEF--AE---SRPL---EKQLWAGAIDTVGD-KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQG  264 (324)
T ss_dssp             EEEEGGGS--SC---CCSS---CCCCEEEEEESSCH-HHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEE
T ss_pred             EEEecCCH--HH---HHhh---cCCCccEEEECCCc-HHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEE
Confidence            99986432  21   2222   34589999999997 5889999999999999999976543 35666678889999999


Q ss_pred             eeec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          234 VFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       234 ~~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      .+..       .+.++.+++++++|++  ++. +++|++  +++++|++.+.+++..||+|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~-~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          265 VDSVMTPPARRAEAWARLVKDLPESFY--AQA-ATEITL--ADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             CCSTTCCHHHHHHHHHHHHHHSCHHHH--HHH-EEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EeccccChHHHHHHHHHHHHHHHcCCC--CCC-ceeEeH--HHHHHHHHHHHhCCCCceEEEec
Confidence            7643       2568889999999988  445 789999  99999999999998899999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=3.6e-38  Score=272.30  Aligned_cols=249  Identities=19%  Similarity=0.247  Sum_probs=206.6

Q ss_pred             ccccceeEEEEEeCCCCC-CCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|++|+ +|++||||++.                             .+|+|+||++++++.++++|+
T Consensus        86 i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~  136 (362)
T 2c0c_A           86 DIGFEGIGEVVALGLSASARYTVGQAVAYM-----------------------------APGSFAEYTVVPASIATPVPS  136 (362)
T ss_dssp             ECCSEEEEEEEEECTTGGGTCCTTCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSS
T ss_pred             CCCceeEEEEEEECCCccCCCCCCCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCC
Confidence            789999999999999999 99999999863                             259999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           81 NVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      . +++.|++..++.|||+++.. +++++|++|||+|+ |++|++++|+++.+|+ .|+++++++++.++++++|++.+++
T Consensus       137 ~-~~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~  214 (362)
T 2c0c_A          137 V-KPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPIN  214 (362)
T ss_dssp             S-CHHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             C-chHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEe
Confidence            6 45444455688999999965 78999999999996 9999999999999999 6999999999999999999999887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCc-----------cccchhhhcc
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-----------TVPLTPAAVR  227 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~  227 (290)
                      ++  ++++.+.+++.   .+.++|++|||+|. ..+..++++++++|+++.+|......           .+ ...++.+
T Consensus       215 ~~--~~~~~~~~~~~---~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~  287 (362)
T 2c0c_A          215 YK--TEPVGTVLKQE---YPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKK  287 (362)
T ss_dssp             TT--TSCHHHHHHHH---CTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHH
T ss_pred             cC--ChhHHHHHHHh---cCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhh
Confidence            54  35666666554   34689999999997 68899999999999999998643211           11 1456788


Q ss_pred             CcEEEEeeec------CCcHHHHHHHHHcCCCCCCCc------eeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          228 EVDVVGVFRY------KNTWPLCLELLRSGKIDVKPL------VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       228 ~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ++++.+.+..      .+.++++++++++|++++...      +.+.+++  +++++|++.+.+++..+|+|+++
T Consensus       288 ~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          288 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             TCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBST--THHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCH--HHHHHHHHHHHcCCCCceEEEEc
Confidence            9999997643      346889999999999954322      2345678  99999999999887889999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=3.2e-37  Score=264.09  Aligned_cols=245  Identities=18%  Similarity=0.174  Sum_probs=208.4

Q ss_pred             ccccc----eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEE
Q 022879            2 VIGHE----CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK   77 (290)
Q Consensus         2 i~G~e----~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~   77 (290)
                      ++|||    ++|+|++.  ++++|++||||++                               +|+|+||++++++.+++
T Consensus        69 ~~G~e~g~~~~G~V~~~--~v~~~~vGdrV~~-------------------------------~G~~aey~~v~~~~~~~  115 (336)
T 4b7c_A           69 GIGEVMRALGVGKVLVS--KHPGFQAGDYVNG-------------------------------ALGVQDYFIGEPKGFYK  115 (336)
T ss_dssp             CTTSBCCCEEEEEEEEE--CSTTCCTTCEEEE-------------------------------ECCSBSEEEECCTTCEE
T ss_pred             CCCcccCCceEEEEEec--CCCCCCCCCEEec-------------------------------cCCceEEEEechHHeEE
Confidence            56777    79999994  5889999999985                               38999999999999999


Q ss_pred             CCCCCChhhh--hhh-hhhHHHHHHH-HhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc
Q 022879           78 LPDNVSLEEG--AMC-EPLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI  151 (290)
Q Consensus        78 ~P~~~~~~~a--a~~-~~~~ta~~~l-~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l  151 (290)
                      +|+++++.++  +.+ .+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.+ +++
T Consensus       116 ~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~  194 (336)
T 4b7c_A          116 VDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEEL  194 (336)
T ss_dssp             ECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT
T ss_pred             cCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc
Confidence            9999977775  444 6889999999 5689999999999998 9999999999999999 799999999999999 899


Q ss_pred             CCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-------Cccccchhh
Q 022879          152 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-------EMTVPLTPA  224 (290)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~  224 (290)
                      |++.++++.  ++++.+.+.+.+   ++++|++||++|. ..+..++++++++|+++.+|....       ...++...+
T Consensus       195 g~~~~~~~~--~~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  268 (336)
T 4b7c_A          195 GFDGAIDYK--NEDLAAGLKREC---PKGIDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSL  268 (336)
T ss_dssp             CCSEEEETT--TSCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHH
T ss_pred             CCCEEEECC--CHHHHHHHHHhc---CCCceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHH
Confidence            999988854  467777776653   4689999999996 688999999999999999986441       124555667


Q ss_pred             hccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          225 AVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       225 ~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+++++.+.+..      .+.++++++++++|++++  .+...+++  +++++|++.+.+++..||+||++
T Consensus       269 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          269 LVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQS--REDIVEGL--ETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC--CEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCccc--ceeeecCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            8899999998765      267889999999999954  44455777  99999999999998899999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.8e-38  Score=296.10  Aligned_cols=247  Identities=19%  Similarity=0.294  Sum_probs=207.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++|++|++|++||||++.                             ..|+|+||++++++.++++|++
T Consensus       267 ~lG~E~aG~V~~vG~~V~~~~vGDrV~~~-----------------------------~~G~~ae~~~v~~~~~~~iP~~  317 (795)
T 3slk_A          267 SLGSEGAGVVVETGPGVTGLAPGDRVMGM-----------------------------IPKAFGPLAVADHRMVTRIPAG  317 (795)
T ss_dssp             CSCCCEEEEEEEECSSCCSSCTTCEEEEC-----------------------------CSSCSSSEEEEETTSEEECCTT
T ss_pred             cccceeEEEEEEeCCCCCcCCCCCEEEEE-----------------------------ecCCCcCEEEeehHHEEECCCC
Confidence            68999999999999999999999999863                             3599999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +++++||.++ .+.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .|+++.+++ |.++++ +|++++++
T Consensus       318 ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~  394 (795)
T 3slk_A          318 WSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLAS  394 (795)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEEC
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheee
Confidence            9999999885 7889999985 489999999999987 9999999999999999 477876665 556555 99999887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +  .+.++.+.+++.  +++.++|+|||++|+ +.+..++++++++|+++.+|........... ...+++++.+.... 
T Consensus       395 ~--~~~~~~~~i~~~--t~g~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~  468 (795)
T 3slk_A          395 S--RTCDFEQQFLGA--TGGRGVDVVLNSLAG-EFADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVE  468 (795)
T ss_dssp             S--SSSTHHHHHHHH--SCSSCCSEEEECCCT-TTTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGG
T ss_pred             c--CChhHHHHHHHH--cCCCCeEEEEECCCc-HHHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccc
Confidence            4  457888888765  467899999999997 6789999999999999999965433222221 22355655554321 


Q ss_pred             ------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          238 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       238 ------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                            .+.++++++++++|++  ++.+.++|++  +++++|++.+.+++..||+||++
T Consensus       469 ~~~~~~~~~l~~~~~l~~~g~l--~p~~~~~~~l--~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          469 AGPQRIGEMLHELVELFEGRVL--EPLPVTAWDV--RQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             GHHHHHHHHHHHHHHHHHTTSC--CCCCEEEEEG--GGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             cCHHHHHHHHHHHHHHHHcCCc--CCCcceeEcH--HHHHHHHHHHhcCCccceEEEec
Confidence                  4678999999999998  5567889999  99999999999999999999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.8e-38  Score=275.75  Aligned_cols=248  Identities=17%  Similarity=0.202  Sum_probs=202.6

Q ss_pred             ccccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            2 VIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      ++|||++|+|+++|++| ++|++||||++.                             .+|+|+||++++++.++++|+
T Consensus        93 i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~iP~  143 (379)
T 3iup_A           93 PVGNEGAGVVVEAGSSPAAQALMGKTVAAI-----------------------------GGAMYSQYRCIPADQCLVLPE  143 (379)
T ss_dssp             ECCSCEEEEEEEECSSHHHHTTTTCEEEEC-----------------------------CSCCSBSEEEEEGGGEEECCT
T ss_pred             cceeeeEEEEEEeCCCcccCCCCCCEEEec-----------------------------CCCcceeEEEeCHHHeEECCC
Confidence            68999999999999999 899999999974                             249999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEE--CCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM--GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~--Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ ..+.|||++++... ++|++|||+  |+|++|++++|+|+.+|+ +|+++++++++.++++++|++.++
T Consensus       144 ~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~  221 (379)
T 3iup_A          144 GATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLKAQGAVHVC  221 (379)
T ss_dssp             TCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHHHTTCSCEE
T ss_pred             CCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCcEEE
Confidence            9999999966 46778998887755 899999999  459999999999999999 588999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhc-----cC-----------CEEEEeccCCCCccccc
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-----AG-----------GKVCLVGMGHHEMTVPL  221 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~  221 (290)
                      +++  ++++.+.+++++  .+.++|++|||+|++.....++++++     ++           |+++.+|.... ..++.
T Consensus       222 ~~~--~~~~~~~v~~~t--~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~-~~~~~  296 (379)
T 3iup_A          222 NAA--SPTFMQDLTEAL--VSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT-SPTEF  296 (379)
T ss_dssp             ETT--STTHHHHHHHHH--HHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE-EEEEE
T ss_pred             eCC--ChHHHHHHHHHh--cCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCC-Ccccc
Confidence            854  467888887765  34579999999998667778888875     44           55555554321 23334


Q ss_pred             hhhhccCcEEEEeeec-----------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhH--HHHHHHHhcCCCceeEEE
Q 022879          222 TPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV--EEAFETSARGGTAIKVMF  288 (290)
Q Consensus       222 ~~~~~~~~~i~~~~~~-----------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~gk~vl  288 (290)
                      ..++.+++++.+.+..           .+.++.+++++.+ .+  .+.++++|++  +++  ++|++.+.+++..||+||
T Consensus       297 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l--~~~~~~~A~~~l~~~~~~gKvVv  371 (379)
T 3iup_A          297 NRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISL--AEVLDLDMIAVYNKRATGEKYLI  371 (379)
T ss_dssp             CCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEH--HHHTCHHHHHHHTTCCTTCCEEE
T ss_pred             ccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecH--HHhhhHHHHHHHhcCCCCceEEE
Confidence            4566788899887532           1334566666666 34  7788889999  999  999999999989999999


Q ss_pred             eC
Q 022879          289 NL  290 (290)
Q Consensus       289 ~~  290 (290)
                      ++
T Consensus       372 ~~  373 (379)
T 3iup_A          372 NP  373 (379)
T ss_dssp             ET
T ss_pred             eC
Confidence            74

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.4e-37  Score=265.71  Aligned_cols=253  Identities=19%  Similarity=0.303  Sum_probs=202.2

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|+++  ++++|++||||++.+..                     ++ ...+|+|+||++++++.++++|++
T Consensus        64 i~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~iP~~  119 (330)
T 1tt7_A           64 ILGIDAAGTVVSS--NDPRFAEGDEVIATSYE---------------------LG-VSRDGGLSEYASVPGDWLVPLPQN  119 (330)
T ss_dssp             ECCSEEEEEEEEC--SSTTCCTTCEEEEESTT---------------------BT-TTBCCSSBSSEEECGGGEEECCTT
T ss_pred             cccceEEEEEEEc--CCCCCCCCCEEEEcccc---------------------cC-CCCCccceeEEEecHHHeEECCCC
Confidence            7899999999996  46889999999974210                     11 134699999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH---hcCCCCCC-eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACR---RANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~---~~~~~~~~-~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +++++||.++ .+.|+|.+++   .+++++++ +|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.
T Consensus       120 l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~  198 (330)
T 1tt7_A          120 LSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASE  198 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSE
T ss_pred             CCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcE
Confidence            9999999885 5677887764   46788886 9999998 9999999999999999 4888889999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++++..  + .+.++++   .+.++|++|||+|+ ..+..++++++++|+++.+|.... ...++...++.+++++.|.
T Consensus       199 v~~~~~~--~-~~~~~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  271 (330)
T 1tt7_A          199 VISREDV--Y-DGTLKAL---SKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI  271 (330)
T ss_dssp             EEEHHHH--C-SSCCCSS---CCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEEC
T ss_pred             EEECCCc--h-HHHHHHh---hcCCccEEEECCcH-HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEE
Confidence            8875311  0 0111111   24579999999998 688999999999999999996543 3345556678899999997


Q ss_pred             eec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          235 FRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       235 ~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +..       .+.++.+.+++++|++  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          272 DSVYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSL--EETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             CSSSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECS--TTHHHHHHHTTTTCCSSEEEECC
T ss_pred             eccccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            422       2345566666677877  6778889999  99999999999888889999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=5.1e-36  Score=258.64  Aligned_cols=248  Identities=20%  Similarity=0.254  Sum_probs=206.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      .++|||++|+|++  ++|++|++||||++.                              .|+|+||++++++.++++|+
T Consensus        78 ~v~G~E~~G~V~~--~~v~~~~vGdrV~~~------------------------------~G~~aey~~v~~~~~~~iP~  125 (357)
T 2zb4_A           78 QVVDGGGIGIIEE--SKHTNLTKGDFVTSF------------------------------YWPWQTKVILDGNSLEKVDP  125 (357)
T ss_dssp             SBCEEEEEEEEEE--ECSTTCCTTCEEEEE------------------------------EEESBSEEEEEGGGCEECCG
T ss_pred             ccccccEEEEEEe--cCCCCCCCCCEEEec------------------------------CCCcEEEEEEchHHceecCc
Confidence            3689999999999  889999999999862                              38999999999999999999


Q ss_pred             CC-----ChhhhhhhhhhHHHHHHH-HhcCCCCC--CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-
Q 022879           81 NV-----SLEEGAMCEPLSVGVHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-  150 (290)
Q Consensus        81 ~~-----~~~~aa~~~~~~ta~~~l-~~~~~~~~--~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-  150 (290)
                      ++     +++.|++..+++|||+++ +.++++++  ++|||+|+ |++|++++|+++..|++.|+++++++++.+.+++ 
T Consensus       126 ~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~  205 (357)
T 2zb4_A          126 QLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE  205 (357)
T ss_dssp             GGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred             ccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            99     666445556899999999 56889999  99999998 9999999999999999668889999999888876 


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccc--------
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPL--------  221 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~--------  221 (290)
                      +|++.++++.  ++++.+.+.+..  .+ ++|++|||+|. ..+..++++++++|+++.+|..... ..++.        
T Consensus       206 ~g~~~~~d~~--~~~~~~~~~~~~--~~-~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  279 (357)
T 2zb4_A          206 LGFDAAINYK--KDNVAEQLRESC--PA-GVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAI  279 (357)
T ss_dssp             SCCSEEEETT--TSCHHHHHHHHC--TT-CEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHH
T ss_pred             cCCceEEecC--chHHHHHHHHhc--CC-CCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhh
Confidence            9999888754  356766666553  23 89999999996 7889999999999999999864321 12221        


Q ss_pred             -hhhhccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          222 -TPAAVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       222 -~~~~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                       ..++.+++++.+++..      .+.++++++++++|++++.  +...|++  +++++|++.+.+++..+|+|+++
T Consensus       280 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          280 EAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGL--ENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCH--HHHHHHHHHHHcCCCCceEEEEE
Confidence             3567889999997642      4568999999999999554  4456778  99999999999887789999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.6e-37  Score=260.29  Aligned_cols=252  Identities=19%  Similarity=0.265  Sum_probs=197.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++  ++++|++||||++.+..                     ++ ...+|+|+||++++++.++++|+
T Consensus        62 ~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~~P~  117 (328)
T 1xa0_A           62 FVPGIDLAGVVVSS--QHPRFREGDEVIATGYE---------------------IG-VTHFGGYSEYARLHGEWLVPLPK  117 (328)
T ss_dssp             BCCCSEEEEEEEEC--CSSSCCTTCEEEEESTT---------------------BT-TTBCCSSBSEEEECGGGCEECCT
T ss_pred             cccCcceEEEEEec--CCCCCCCCCEEEEcccc---------------------CC-CCCCccceeEEEechHHeEECCC
Confidence            37999999999995  57889999999974210                     11 13469999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH---hcCCCCCC-eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR---RANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD  154 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~---~~~~~~~~-~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  154 (290)
                      ++++++||.++ .+.|+|.+++   .+++++++ +|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++
T Consensus       118 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~  196 (328)
T 1xa0_A          118 GLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAK  196 (328)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCS
T ss_pred             CCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence            99999999885 5667887663   46788986 9999998 9999999999999999 588888999999999999999


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEE
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVG  233 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~  233 (290)
                      .++++..  .+ .+.++++   .+.++|++||++|. ..+..++++++++|+++.+|.... ...++...++.+++++.+
T Consensus       197 ~~i~~~~--~~-~~~~~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g  269 (328)
T 1xa0_A          197 EVLARED--VM-AERIRPL---DKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLG  269 (328)
T ss_dssp             EEEECC------------C---CSCCEEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEE
T ss_pred             EEEecCC--cH-HHHHHHh---cCCcccEEEECCcH-HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEE
Confidence            9988542  21 2223322   34589999999998 588999999999999999996543 334555667889999999


Q ss_pred             eeec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          234 VFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       234 ~~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ....       .+.++.+.+++++| +  ++ ++++|++  +++++|++.+.+++..||+|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~g-l--~~-~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          270 IDSVYCPMDLRLRIWERLAGDLKPD-L--ER-IAQEISL--AELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             CCSSSCCHHHHHHHHHHHHTTTCCC-H--HH-HEEEEEG--GGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             EecccCCHHHHHHHHHHHHHHHHcC-C--ce-eeeEeCH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            7422       13455566666666 5  34 4688999  99999999999888889999975

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.1e-35  Score=255.54  Aligned_cols=249  Identities=18%  Similarity=0.191  Sum_probs=207.1

Q ss_pred             CccccceeEEEEE--eCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc--eE
Q 022879            1 MVIGHECAGVIEK--VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CF   76 (290)
Q Consensus         1 ~i~G~e~~G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~   76 (290)
                      +++|||++|++++  +|+++++|++||||++                               .|+|+||+.++++.  ++
T Consensus        72 ~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~-------------------------------~g~~aey~~v~~~~~~~~  120 (345)
T 2j3h_A           72 YTPGQPIQGYGVSRIIESGHPDYKKGDLLWG-------------------------------IVAWEEYSVITPMTHAHF  120 (345)
T ss_dssp             CCTTSBCEEEEEEEEEEECSTTCCTTCEEEE-------------------------------EEESBSEEEECCCTTTCE
T ss_pred             cCCCCeeecceEEEEEecCCCCCCCCCEEEe-------------------------------ecCceeEEEeccccccee
Confidence            4789999999999  9999999999999985                               27899999999876  99


Q ss_pred             ECCC---CCChhhhhhhhhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H
Q 022879           77 KLPD---NVSLEEGAMCEPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E  150 (290)
Q Consensus        77 ~~P~---~~~~~~aa~~~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~  150 (290)
                      ++|+   +++++.|++..+++|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++ +
T Consensus       121 ~ip~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~  199 (345)
T 2j3h_A          121 KIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTK  199 (345)
T ss_dssp             EECCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred             ecCCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH
Confidence            9996   456664444468899999995 488999999999997 9999999999999999 7999999999999998 7


Q ss_pred             cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC------Cccccchhh
Q 022879          151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH------EMTVPLTPA  224 (290)
Q Consensus       151 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~  224 (290)
                      +|++.++++.. .+++.+.+++..   +.++|++||++|. ..+..++++++++|+++.+|....      ...++...+
T Consensus       200 ~g~~~~~d~~~-~~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~  274 (345)
T 2j3h_A          200 FGFDDAFNYKE-ESDLTAALKRCF---PNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNI  274 (345)
T ss_dssp             SCCSEEEETTS-CSCSHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHH
T ss_pred             cCCceEEecCC-HHHHHHHHHHHh---CCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHH
Confidence            99998887542 236666666542   3679999999997 688999999999999999986432      224455667


Q ss_pred             hccCcEEEEeeec------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          225 AVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       225 ~~~~~~i~~~~~~------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +.+++++.+.+..      .+.++++++++++|++  ++.+.+.|++  +++++|++.+.+++..||+|+++
T Consensus       275 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          275 IYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI--TYVEDVADGL--EKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             HHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEESG--GGSHHHHHHHHTTCCSSEEEEES
T ss_pred             hhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCC--cCcccccCCH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            8899999987653      1238899999999999  4566667888  99999999999988899999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.4e-35  Score=250.21  Aligned_cols=233  Identities=27%  Similarity=0.404  Sum_probs=195.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+           ||||++.+                            .+|+|+||++++++.++++|+
T Consensus        57 ~i~G~e~~G~V~-----------GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~   97 (302)
T 1iz0_A           57 FIPGMEVVGVVE-----------GRRYAALV----------------------------PQGGLAERVAVPKGALLPLPE   97 (302)
T ss_dssp             BCCCCEEEEEET-----------TEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCT
T ss_pred             CcccceEEEEEE-----------CcEEEEec----------------------------CCcceeeEEEEcHHHcEeCCC
Confidence            379999999997           99999742                            359999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  157 (290)
                      ++++++||.+ .+++|||+++.. + +++|++|||+|+ |++|++++|+++.+|+ .|+++++++++.++++++|++.++
T Consensus        98 ~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~  175 (302)
T 1iz0_A           98 GLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAA  175 (302)
T ss_dssp             TCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEE
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence            9999998877 589999999974 6 999999999998 9999999999999999 799999999999999999999888


Q ss_pred             ecCCCc-ccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEEee
Q 022879          158 KVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVF  235 (290)
Q Consensus       158 ~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~  235 (290)
                      +++  + +++.+.+        .++|++|| +|. ..+..++++++++|+++.+|..... ..++...++.+++++.+..
T Consensus       176 ~~~--~~~~~~~~~--------~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~  243 (302)
T 1iz0_A          176 TYA--EVPERAKAW--------GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFW  243 (302)
T ss_dssp             EGG--GHHHHHHHT--------TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECC
T ss_pred             ECC--cchhHHHHh--------cCceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEe
Confidence            743  2 2332221        57999999 998 6889999999999999999865432 2456666788999999986


Q ss_pred             ec-----CCcHHHHHH---HHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          236 RY-----KNTWPLCLE---LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       236 ~~-----~~~l~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ..     .+.++++++   ++++|++  ++.++++|++  +++++|++.+.+++..+|+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          244 LTPLLREGALVEEALGFLLPRLGREL--RPVVGPVFPF--AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHHTTCHHHHHHHHHHHGGGBTTTB--CCCEEEEEEG--GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             ccchhhhHHHHHHHHhhhHHHHcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            42     457889999   9999998  6778899999  99999999999887889999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=4.3e-34  Score=244.36  Aligned_cols=246  Identities=18%  Similarity=0.213  Sum_probs=201.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|||++|+|++.  ++++|++||||++                               .|+|+||++++++.++++|++
T Consensus        66 ~~g~e~~G~Vv~~--~v~~~~vGdrV~~-------------------------------~g~~aey~~v~~~~~~~iP~~  112 (333)
T 1v3u_A           66 VMMGQQVARVVES--KNSAFPAGSIVLA-------------------------------QSGWTTHFISDGKGLEKLLTE  112 (333)
T ss_dssp             BCCCCEEEEEEEE--SCTTSCTTCEEEE-------------------------------CCCSBSEEEESSTTEEECC--
T ss_pred             ccccceEEEEEec--CCCCCCCCCEEEe-------------------------------cCceEEEEEechHHeEEcCcc
Confidence            6899999999995  6789999999986                               288999999999999999997


Q ss_pred             ----CChhhh-hhh-hhhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           82 ----VSLEEG-AMC-EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        82 ----~~~~~a-a~~-~~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                          +++.++ +.+ .+++|||+++. .+++++++++||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|+
T Consensus       113 ~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~  191 (333)
T 1v3u_A          113 WPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGF  191 (333)
T ss_dssp             CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC
T ss_pred             cccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCC
Confidence                888763 444 68899999995 488999999999998 9999999999999999 78999999999999999999


Q ss_pred             CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC------Cc-cccchhhhc
Q 022879          154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH------EM-TVPLTPAAV  226 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~  226 (290)
                      +.++++.. .+++.+.+.+..   ++++|++||++|. ..+..++++++++|+++.+|....      .. ..+...++.
T Consensus       192 ~~~~d~~~-~~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  266 (333)
T 1v3u_A          192 DAAFNYKT-VNSLEEALKKAS---PDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIY  266 (333)
T ss_dssp             SEEEETTS-CSCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHH
T ss_pred             cEEEecCC-HHHHHHHHHHHh---CCCCeEEEECCCh-HHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhh
Confidence            88887532 156666666553   2579999999996 578899999999999999996542      11 124456788


Q ss_pred             cCcEEEEeeec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          227 REVDVVGVFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       227 ~~~~i~~~~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      +++++.|....       .+.++++++++++|++++.  ....+++  +++++|++.+.+++..||+|+++
T Consensus       267 ~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          267 KQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYH--EHVTKGF--ENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             TTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCC--EEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCc--cccccCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999997643       3467789999999999554  3345677  99999999999888889999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=1.3e-28  Score=252.48  Aligned_cols=241  Identities=20%  Similarity=0.285  Sum_probs=195.7

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|          .+||+|++.                            ...|+|+||++++++.++++|++
T Consensus      1598 ~lG~E~aG~V----------~vGdrV~g~----------------------------~~~G~~Aeyv~vp~~~v~~iPd~ 1639 (2512)
T 2vz8_A         1598 MLGMEFSGRD----------ASGRRVMGM----------------------------VPAEGLATSVLLLQHATWEVPST 1639 (2512)
T ss_dssp             CCCCEEEEEE----------TTSCCEEEE----------------------------CSSCCSBSEEECCGGGEEECCTT
T ss_pred             ceEEEEEEEE----------ccCCEEEEe----------------------------ecCCceeeEEEcccceEEEeCCC
Confidence            5899999987          279999864                            23589999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC
Q 022879           82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD  154 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~  154 (290)
                      +++++||.++ .++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++++.+++++    +|++
T Consensus      1640 ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~ 1718 (2512)
T 2vz8_A         1640 WTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDET 1718 (2512)
T ss_dssp             SCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCST
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCce
Confidence            9999999886 7889999985 488999999999986 9999999999999999 68888899999998886    7888


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCC-ccccchhhhccCcEEEE
Q 022879          155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVG  233 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~  233 (290)
                      +++++  .+.++.+.+++.  +++.++|+|||+++ .+.+..++++++++|+++.+|..... .......++.+++++.+
T Consensus      1719 ~v~~~--~~~~~~~~i~~~--t~g~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g 1793 (2512)
T 2vz8_A         1719 CFANS--RDTSFEQHVLRH--TAGKGVDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHG 1793 (2512)
T ss_dssp             TEEES--SSSHHHHHHHHT--TTSCCEEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEE
T ss_pred             EEecC--CCHHHHHHHHHh--cCCCCceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEE
Confidence            88874  346777766654  35678999999998 47899999999999999999853211 11122345678888888


Q ss_pred             eeec------CCcHHHHHHHH----HcCCCCCCCceeeEeeCChhhHHHHHHHHhcCCCceeEEEeC
Q 022879          234 VFRY------KNTWPLCLELL----RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  290 (290)
Q Consensus       234 ~~~~------~~~l~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vl~~  290 (290)
                      ....      ...++.+++++    .+|.+  .+.++++|++  +++++|++.+.+++..||+|+++
T Consensus      1794 ~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l--~p~i~~~f~l--~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1794 ILLDSLFEEGGATWQEVSELLKAGIQEGVV--QPLKCTVFPR--TKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             CCGGGTTSSCCHHHHHHHHHHHHHHTTTCS--CCCCEEEEES--STHHHHHHHHHTTCCSSEEEEEC
T ss_pred             eeHHHHhhhCHHHHHHHHHHHHHHHHcCCc--CCCcceEecH--HHHHHHHHhhhccCccceEEEEC
Confidence            6542      23455555554    46666  5677889999  99999999999998899999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.87  E-value=1.6e-21  Score=154.07  Aligned_cols=177  Identities=21%  Similarity=0.338  Sum_probs=130.4

Q ss_pred             CceEECCCCCChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH
Q 022879           73 DLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  149 (290)
Q Consensus        73 ~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  149 (290)
                      +.++++|+++++++||.++ ++.|||+++.. ++++++++|||+|+ |++|++++++++..|+ .|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4678999999999999884 89999999965 78999999999996 9999999999999999 6889999999998899


Q ss_pred             HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC--Cccccchhhhcc
Q 022879          150 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVR  227 (290)
Q Consensus       150 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~  227 (290)
                      ++|.+.++++.  ++++.+.+.+..  .+.++|++||++|. ..+..+++.++++|+++.+|....  ...++.. .+.+
T Consensus        81 ~~g~~~~~d~~--~~~~~~~~~~~~--~~~~~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSR--SVDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETT--CSTHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCC--cHHHHHHHHHHh--CCCCCeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcC
Confidence            99988877753  345555555542  34579999999986 688999999999999999986542  2223332 3457


Q ss_pred             CcEEEEeee------c----CCcHHHHHHHHHcCCCCCC
Q 022879          228 EVDVVGVFR------Y----KNTWPLCLELLRSGKIDVK  256 (290)
Q Consensus       228 ~~~i~~~~~------~----~~~l~~~~~~~~~g~~~~~  256 (290)
                      ++++.+...      .    .+.++++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            788775421      1    4578899999999999553

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.22  E-value=2.8e-11  Score=98.38  Aligned_cols=168  Identities=13%  Similarity=0.075  Sum_probs=111.2

Q ss_pred             CCCCCEEEEcC-------CcCCCCChhhcCCCCCCCCCC-ccccCCCCCcccceeEeecCCceEECCCCCChh------h
Q 022879           21 LVPGDRVALEP-------GISCWRCDHCKGGRYNLCPEM-KFFATPPVHGSLANQVVHPADLCFKLPDNVSLE------E   86 (290)
Q Consensus        21 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~------~   86 (290)
                      +++||+|++.+       ..+|++|.+|..|..+.|+.. ..+      |...+      ..+.+-|+.....      .
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~~------G~~~~------~~~~~~p~~~~~~~~~~~~~   71 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKPE------GVKIN------GFEVYRPTLEEIILLGFERK   71 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCCT------TEEET------TEEEECCCHHHHHHHTSCCS
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCCC------CCEEE------EEEEeCCCHHHHHHhcCcCC
Confidence            89999999987       678899999999988888743 222      32222      3333333322222      1


Q ss_pred             hhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CC-CEEEecCC
Q 022879           87 GAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GA-DNIVKVST  161 (290)
Q Consensus        87 aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~  161 (290)
                      ++.+.+ ..+.+.+....+.++++||..|+| .|..++++++. +. .+++++.+++..+.+++.    +. ..+.... 
T Consensus        72 ~~~~~~-~~~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-  146 (248)
T 2yvl_A           72 TQIIYP-KDSFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFN-  146 (248)
T ss_dssp             SCCCCH-HHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEEC-
T ss_pred             CCcccc-hhHHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEE-
Confidence            112212 233355666788899999999998 58899999998 66 799999999988877653    32 1111111 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEecc
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  212 (290)
                        .++.+..     ..+.++|+|+...+.+ ..+..+.+.|+++|+++....
T Consensus       147 --~d~~~~~-----~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          147 --VDFKDAE-----VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             --SCTTTSC-----CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             --cChhhcc-----cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence              1111100     0235799999988765 678889999999999998754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.04  E-value=2e-12  Score=112.56  Aligned_cols=180  Identities=15%  Similarity=0.240  Sum_probs=126.7

Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCC
Q 022879            3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV   82 (290)
Q Consensus         3 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~   82 (290)
                      .|+|.++.|.++|++++++.+|+.++.-. .  .   .             .+......|++++|+......++.+|+++
T Consensus        77 ~g~~a~~~i~~v~~Glds~~vGe~~Il~q-v--k---~-------------~~~~~~~~G~~~~~~~~~~~~a~~~~k~v  137 (404)
T 1gpj_A           77 RGSEAVRHLFRVASGLESMMVGEQEILRQ-V--K---K-------------AYDRAARLGTLDEALKIVFRRAINLGKRA  137 (404)
T ss_dssp             EHHHHHHHHHHHHTTTTSSSTTCHHHHHH-H--H---H-------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred             cCchHhhhheeeccCCCCCcCCcchhHHH-H--H---H-------------HHHHHHHcCCchHHHHHHHHHHhhhhccC
Confidence            46788888899999999999999873200 0  0   0             00000123668888888888889999988


Q ss_pred             ChhhhhhhhhhHHHHHHHHhcC----CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCEEE
Q 022879           83 SLEEGAMCEPLSVGVHACRRAN----IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVAKEIGADNIV  157 (290)
Q Consensus        83 ~~~~aa~~~~~~ta~~~l~~~~----~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~  157 (290)
                      +...++...++.+++.++..+.    -.+|++|+|.|+|.+|.++++.++..|++.|+++++++++. ++++.+|+. ++
T Consensus       138 ~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~  216 (404)
T 1gpj_A          138 REETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AV  216 (404)
T ss_dssp             HHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-EC
T ss_pred             cchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-ee
Confidence            8777766567778887765422    25899999999999999999999999997799999998886 677888875 33


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHH--HHHHH--h--ccCCEEEEeccCC
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS--TALGA--T--CAGGKVCLVGMGH  214 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~~  214 (290)
                      ++    .++.+    ..    .++|+|++|++.+..+.  ..+..  +  ++++.++.++...
T Consensus       217 ~~----~~l~~----~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          217 RF----DELVD----HL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             CG----GGHHH----HH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             cH----HhHHH----Hh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            22    23322    21    25899999998753321  34454  4  5567777777543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.94  E-value=2.1e-09  Score=92.12  Aligned_cols=133  Identities=20%  Similarity=0.262  Sum_probs=94.5

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      +++|+|.|+|++|+++++.++.+|+ .|+++++++++.+.+++++...  +++  ...+++.+.   +     .++|++|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~---~-----~~~DvVI  235 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLY--SNSAEIETA---V-----AEADLLI  235 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEE--CCHHHHHHH---H-----HTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeee--CCHHHHHHH---H-----cCCCEEE
Confidence            4899999999999999999999999 7999999999999888766443  222  111222221   1     2699999


Q ss_pred             EccCCHHH------HHHHHHHhccCCEEEEeccCCC-------CccccchhhhccCcEEEEeeec-------------CC
Q 022879          186 DCAGLNKT------MSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------KN  239 (290)
Q Consensus       186 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~~  239 (290)
                      +|++.+..      ....++.++++|.++.++....       ...++...+..+++++.+....             +.
T Consensus       236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~  315 (361)
T 1pjc_A          236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNS  315 (361)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHH
T ss_pred             ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHH
Confidence            99987432      4567888999999999985432       2234444456678887775422             23


Q ss_pred             cHHHHHHHHHcC
Q 022879          240 TWPLCLELLRSG  251 (290)
Q Consensus       240 ~l~~~~~~~~~g  251 (290)
                      .+..+++++.+|
T Consensus       316 ~~~~l~~l~~~G  327 (361)
T 1pjc_A          316 TLPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHHG
T ss_pred             HHHHHHHHHhCC
Confidence            456777888776

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.76  E-value=4.4e-08  Score=84.60  Aligned_cols=143  Identities=20%  Similarity=0.244  Sum_probs=98.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EecCCC-------------ccc----HHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-------------LQD----IAE  168 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~-------------~~~----~~~  168 (290)
                      ++++|+|.|+|.+|++++++++.+|+ .|++++.++++.+.++++|+..+ ++....             +++    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 59999999999888888997644 121100             000    112


Q ss_pred             HHHHHHHHhCCCccEEEEcc---CCHH--H-HHHHHHHhccCCEEEEeccCC-CC--ccccchhhhccCcEEEEeeec-C
Q 022879          169 EVEKIQKAMGTGIDVSFDCA---GLNK--T-MSTALGATCAGGKVCLVGMGH-HE--MTVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                      .+.+..    .+.|+||+|+   |.+.  . ....++.+++++.++.++... ..  ...+...+..+.+++.+.... .
T Consensus       250 ~l~~~~----~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~  325 (384)
T 1l7d_A          250 AVLKEL----VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPS  325 (384)
T ss_dssp             HHHHHH----TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGG
T ss_pred             HHHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcc
Confidence            233322    4699999999   5321  2 267888999999999998432 21  122333456788888887665 3


Q ss_pred             CcHHHHHHHHHcCCCC
Q 022879          239 NTWPLCLELLRSGKID  254 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~~  254 (290)
                      .....+.+++.++.++
T Consensus       326 ~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          326 RVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhHHH
Confidence            3466688888887653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.74  E-value=1e-07  Score=81.90  Aligned_cols=136  Identities=22%  Similarity=0.286  Sum_probs=87.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++++|+|.|+|.+|+.+++.++.+|+ .|+++++++++.+.+++ ++.....+.. ...    .+.+..    .++|++|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~-~~~----~l~~~~----~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTA-TEA----NIKKSV----QHADLLI  234 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEEC-CHH----HHHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecC-CHH----HHHHHH----hCCCEEE
Confidence            46899999999999999999999999 79999999998887765 7765322221 112    233322    2589999


Q ss_pred             EccCCHHH------HHHHHHHhccCCEEEEeccCCC-------CccccchhhhccCcEEEEeeec-------------CC
Q 022879          186 DCAGLNKT------MSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------KN  239 (290)
Q Consensus       186 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~~  239 (290)
                      +|++.+..      ....++.++++|.++.++....       +.+++...+..+++.+.+....             ..
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            99996432      5677888999999999985432       1122222344567777765422             23


Q ss_pred             cHHHHHHHHHcCC
Q 022879          240 TWPLCLELLRSGK  252 (290)
Q Consensus       240 ~l~~~~~~~~~g~  252 (290)
                      .++.+++++.+|.
T Consensus       315 ~~~~l~~l~~~g~  327 (369)
T 2eez_A          315 TLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCh
Confidence            4566777776663

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.72  E-value=5.8e-08  Score=83.60  Aligned_cols=119  Identities=14%  Similarity=0.192  Sum_probs=83.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++++|+|.|+|.+|+.+++.++.+|+ .|+++++++++.+.+++ +|.....++ ....+    +.+..    .+.|+|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~-~~~~~----l~~~l----~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRY-SSAYE----LEGAV----KRADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEE-CCHHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEecc-CCHHH----HHHHH----cCCCEEE
Confidence            57899999999999999999999999 79999999999887766 776532221 11122    33322    2589999


Q ss_pred             EccCCHHH------HHHHHHHhccCCEEEEeccCC-------CCccccchhhhccCcEEEEee
Q 022879          186 DCAGLNKT------MSTALGATCAGGKVCLVGMGH-------HEMTVPLTPAAVREVDVVGVF  235 (290)
Q Consensus       186 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~~~~~~~i~~~~  235 (290)
                      +|++.+..      ....++.++++|.++.++...       .+.+++...+..+++.+.+..
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~p  299 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVA  299 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBT
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecC
Confidence            99986543      567888999999999998432       122223233445667665543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.63  E-value=1.8e-07  Score=81.13  Aligned_cols=140  Identities=17%  Similarity=0.201  Sum_probs=92.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-------------cccH----HHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDI----AEE  169 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~----~~~  169 (290)
                      ++.+|+|.|+|.+|+.++++++.+|+ .|++++.++++.+.++++|+..+. ++..             .+++    .+.
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHHH
Confidence            57899999999999999999999999 799999999998888889876431 1110             0111    112


Q ss_pred             HHHHHHHhCCCccEEEEccCCH-----HHH-HHHHHHhccCCEEEEeccC-CCCcccc--ch-hhhccCcEEEEeeecCC
Q 022879          170 VEKIQKAMGTGIDVSFDCAGLN-----KTM-STALGATCAGGKVCLVGMG-HHEMTVP--LT-PAAVREVDVVGVFRYKN  239 (290)
Q Consensus       170 ~~~~~~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~-~~~~~~~--~~-~~~~~~~~i~~~~~~~~  239 (290)
                      +.+..    .+.|+||++++.+     ..+ ...++.+++++.++.++.. +......  .. .+..+.+++.+......
T Consensus       249 l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~  324 (401)
T 1x13_A          249 FAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPG  324 (401)
T ss_dssp             HHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGG
T ss_pred             HHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcc
Confidence            33322    2589999996332     122 5788999999999999853 2222222  12 15568889998765532


Q ss_pred             cH-HHHHHHHHcCC
Q 022879          240 TW-PLCLELLRSGK  252 (290)
Q Consensus       240 ~l-~~~~~~~~~g~  252 (290)
                      .+ +.+.+++.++.
T Consensus       325 ~~~~~a~~ll~~~~  338 (401)
T 1x13_A          325 RLPTQSSQLYGTNL  338 (401)
T ss_dssp             GSHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhH
Confidence            23 33555555543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.56  E-value=2.7e-07  Score=81.47  Aligned_cols=104  Identities=19%  Similarity=0.220  Sum_probs=82.6

Q ss_pred             HHHHHHHHhc--CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHH
Q 022879           94 SVGVHACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  171 (290)
Q Consensus        94 ~ta~~~l~~~--~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  171 (290)
                      .++++++...  ...+|++|+|.|.|.+|..+++.++.+|+ .|++++.++++.+.++.+|++ +.       ++.    
T Consensus       258 ~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~-------~l~----  324 (494)
T 3ce6_A          258 HSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV-------TVE----  324 (494)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHH----
T ss_pred             hhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee-------cHH----
Confidence            3456666542  36799999999999999999999999999 799999999998888889875 21       121    


Q ss_pred             HHHHHhCCCccEEEEccCCHHHHH-HHHHHhccCCEEEEeccCC
Q 022879          172 KIQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  214 (290)
                      +..    .+.|+|++++|....+. ..++.++++|+++.+|...
T Consensus       325 e~l----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          325 EAI----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             HHG----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             HHH----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            111    36899999999765555 7889999999999998654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.29  E-value=5.1e-06  Score=71.28  Aligned_cols=139  Identities=20%  Similarity=0.206  Sum_probs=90.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe-------------cCC-CcccH----HH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK-------------VST-NLQDI----AE  168 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~-------------~~~-~~~~~----~~  168 (290)
                      ++.+|+|.|+|.+|+.++++++.+|+ .|++.+.++.+.+.++++|+..+..             |.. -+.++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 6999999999999999998753211             000 00111    11


Q ss_pred             HHHHHHHHhCCCccEEEEccCCHH------HHHHHHHHhccCCEEEEeccC-CCCc--cccchhhhccCcEEEEeeec-C
Q 022879          169 EVEKIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMG-HHEM--TVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~-~~~~--~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                      .+.+.    -.+.|+||.|+..+.      .....++.+++++.++.+.-. +...  .-+...+..+.+++.+..+. .
T Consensus       268 ~l~e~----l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nlP~  343 (405)
T 4dio_A          268 LVAEH----IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNVAG  343 (405)
T ss_dssp             HHHHH----HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSGGG
T ss_pred             HHHHH----hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCCCc
Confidence            23222    246999999964321      235788999999999999732 2211  11112234567888887654 3


Q ss_pred             CcHHHHHHHHHc
Q 022879          239 NTWPLCLELLRS  250 (290)
Q Consensus       239 ~~l~~~~~~~~~  250 (290)
                      ...+.+.+++.+
T Consensus       344 ~vp~tAS~~ls~  355 (405)
T 4dio_A          344 RIAASASLLYAK  355 (405)
T ss_dssp             GGHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            334455544444

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.18  E-value=8.8e-07  Score=65.42  Aligned_cols=107  Identities=11%  Similarity=0.075  Sum_probs=74.1

Q ss_pred             hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHH
Q 022879           92 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEV  170 (290)
Q Consensus        92 ~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~  170 (290)
                      ++++++++++......+.+|+|.|+|.+|...++.++..|++ +.+.++++++.+ +.+.++... ..+    .++.+.+
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~-~~~----~~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEY-VLI----NDIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEE-EEC----SCHHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCce-Eee----cCHHHHh
Confidence            345666677654444589999999999999999988889996 888899988765 466777432 222    2332222


Q ss_pred             HHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       171 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                              .+.|+||.+++.+.... ....+++++.++.++.+
T Consensus        79 --------~~~Divi~at~~~~~~~-~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           79 --------KNNDVIITATSSKTPIV-EERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             --------HTCSEEEECSCCSSCSB-CGGGCCTTCEEEECCSS
T ss_pred             --------cCCCEEEEeCCCCCcEe-eHHHcCCCCEEEEccCC
Confidence                    25899999999753221 12567788888888754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.16  E-value=2.1e-05  Score=67.02  Aligned_cols=128  Identities=17%  Similarity=0.193  Sum_probs=83.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC--C-ccc---------HHHHHHHHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST--N-LQD---------IAEEVEKIQ  174 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~--~-~~~---------~~~~~~~~~  174 (290)
                      ++.+|+|.|+|.+|..+++.++.+|+ .|++.+.++++.+.++++|+..+. .+.  . ...         .......+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~-l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLD-LGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECC-CC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccchhhhhHHHHhhhHHHHH
Confidence            67899999999999999999999999 699999999999999999875321 100  0 000         111111121


Q ss_pred             HHhCCCccEEEEccCCHH------HHHHHHHHhccCCEEEEeccCC-CCc--cccchhhhccCcEEEEeeec
Q 022879          175 KAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~  237 (290)
                      + .-...|+||.++..+.      .....++.+++++.++.++... ...  +.+...+..+.+.+.+..+.
T Consensus       261 e-~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl  331 (381)
T 3p2y_A          261 D-AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL  331 (381)
T ss_dssp             H-HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred             H-HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence            1 1257999999874321      2367889999999999997322 111  11111233456777766544

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.14  E-value=7e-06  Score=67.53  Aligned_cols=105  Identities=17%  Similarity=0.217  Sum_probs=73.3

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCC-CEEEecCCCcccHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVE  171 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~~~  171 (290)
                      ..+....+.++.+||-.|+|+ |..++.+++..+ ...+++++.+++..+.+++    .+. ..+....   .++.+.  
T Consensus       103 ~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~--  176 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV---RDISEG--  176 (277)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC---CCGGGC--
T ss_pred             HHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHc--
Confidence            344557789999999999877 888889999864 3479999999988887754    243 1221111   121111  


Q ss_pred             HHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEecc
Q 022879          172 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  212 (290)
                          .....+|+|+.....+ ..+..+.+.|+++|.++....
T Consensus       177 ----~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          177 ----FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             ----CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             ----ccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence                1234699999876654 577889999999999988753

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.11  E-value=1.8e-06  Score=70.70  Aligned_cols=159  Identities=19%  Similarity=0.190  Sum_probs=96.8

Q ss_pred             CChhhcCCCCC-----CCCCCccccCCCCCcccceeEeecCCceEECCCCCChhhhh----hh-----hhhHHHHH-HHH
Q 022879           37 RCDHCKGGRYN-----LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA----MC-----EPLSVGVH-ACR  101 (290)
Q Consensus        37 ~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa----~~-----~~~~ta~~-~l~  101 (290)
                      .|+.|..+..+     .|++...++.  ..++|.++......... .|.. +.....    ..     .++...+. .+.
T Consensus         4 ~Cp~C~~~~~~~~~~~~C~~~~~~~~--~~~Gy~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (269)
T 1p91_A            4 SCPLCHQPLSREKNSYICPQRHQFDM--AKEGYVNLLPVQHKRSR-DPGD-SAEMMQARRAFLDAGHYQPLRDAIVAQLR   79 (269)
T ss_dssp             BCTTTCCBCEEETTEEECTTCCEEEB--CTTSCEECSCSSSSCSC-CCSS-SHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred             cCCCCCccceeCCCEEECCCCCcCCc--CCCEEEEeecccccCCC-CCCC-CHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence            49999998866     8987666654  23446665544332211 1221 111111    11     11111111 111


Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCC
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      ..-..++.+||..|+|. |..+..+++.. |. .+++++.+++..+.+++.... .++..+.  .++.        ...+
T Consensus        80 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~--~~~~--------~~~~  147 (269)
T 1p91_A           80 ERLDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS--HRLP--------FSDT  147 (269)
T ss_dssp             HHSCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT--TSCS--------BCTT
T ss_pred             HhcCCCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch--hhCC--------CCCC
Confidence            11126788999999988 98999999987 56 799999999999988776533 2222111  1110        1235


Q ss_pred             CccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       180 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .||+|+.... ...+..+.+.|+++|+++....
T Consensus       148 ~fD~v~~~~~-~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          148 SMDAIIRIYA-PCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             CEEEEEEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             ceeEEEEeCC-hhhHHHHHHhcCCCcEEEEEEc
Confidence            7999996544 4678999999999999988754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.10  E-value=2.5e-05  Score=64.26  Aligned_cols=99  Identities=15%  Similarity=0.297  Sum_probs=73.2

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ++++++++||..|+|+.+..++.+++..|+ .|++++.+++..+.+++.    |.+.+-.......+       +   .+
T Consensus       118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-------l---~d  186 (298)
T 3fpf_A          118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-------I---DG  186 (298)
T ss_dssp             TTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-------G---GG
T ss_pred             cCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-------C---CC
Confidence            678999999999998877888888888898 799999999998887653    43222111111111       1   24


Q ss_pred             CCccEEEEccCCH---HHHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..||+|+.+...+   ..+..+.+.|+|+|+++....
T Consensus       187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          187 LEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            6799999765543   578889999999999998753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.06  E-value=5.4e-05  Score=53.26  Aligned_cols=96  Identities=23%  Similarity=0.247  Sum_probs=63.6

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+|+|.|+|.+|...++.+...|...++++++++++.+.+...+.... ..+..  +. +.+.+.    -.++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~--~~-~~~~~~----~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATK-QVDAK--DE-AGLAKA----LGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEE-ECCTT--CH-HHHHHH----TTTCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEE-EecCC--CH-HHHHHH----HcCCCEEEE
Confidence            35689999999999999999999993368889999998887776665432 22221  11 233333    147999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +++..........+...+-.++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEEe
Confidence            998643333333344555555544

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.97  E-value=8.1e-05  Score=64.15  Aligned_cols=95  Identities=19%  Similarity=0.286  Sum_probs=73.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..-.|++++|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|... .       ++    .+.    -...|+
T Consensus       216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-------~L----eea----l~~ADI  278 (435)
T 3gvp_A          216 MMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-------KL----NEV----IRQVDI  278 (435)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------CH----HHH----TTTCSE
T ss_pred             ceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-------cH----HHH----HhcCCE
Confidence            34589999999999999999999999999 6999999887776666666421 1       22    222    236899


Q ss_pred             EEEccCCHHHHH-HHHHHhccCCEEEEeccCCC
Q 022879          184 SFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       184 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  215 (290)
                      ++.|.|....+. ..++.+++++.++.+|....
T Consensus       279 Vi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          279 VITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             EEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             EEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence            999988655555 78899999999999986654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.93  E-value=0.00014  Score=60.19  Aligned_cols=111  Identities=15%  Similarity=0.165  Sum_probs=77.7

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.+++++|.|.|.+|..+++.++.+|+ .|++.+++.++.+.++++|... +++    .+    +.++    -...|+|+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~----l~~~----l~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SK----AAQE----LRDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GG----HHHH----TTTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hh----HHHH----hcCCCEEE
Confidence            468999999999999999999999999 7899999988877777777643 221    12    2222    24689999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  232 (290)
                      .+++....-...++.+++++.++.++.......+  .....+.+.+.
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~  263 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL  263 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence            9997532223567789999999999864333222  33333444443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.90  E-value=0.00012  Score=59.76  Aligned_cols=105  Identities=29%  Similarity=0.320  Sum_probs=71.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ .+++++... .+..+-.+ ++..+.+++..+.. +++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA-GRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6889999987 9999999999999999 6888899988766 446676432 22222222 33333444443333 4699


Q ss_pred             EEEEccCCH----------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          183 VSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       183 ~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++++++|..          +               ..+.++..|+++|+++.++..
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            999999862          1               223355566778999998753

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.90  E-value=3.7e-05  Score=57.34  Aligned_cols=91  Identities=18%  Similarity=0.190  Sum_probs=63.0

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..++.+|+|.|+|.+|...++.++..|. .|+++++++++.+.++ ..|... +..+.  .+ .+.+.+   ....++|+
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~--~~-~~~l~~---~~~~~ad~   87 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA--AE-FETLKE---CGMEKADM   87 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT--TS-HHHHHT---TTGGGCSE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC--CC-HHHHHH---cCcccCCE
Confidence            3577899999999999999999999998 6889999998877666 566543 32221  12 122222   12356999


Q ss_pred             EEEccCCHHHHHHHHHHhcc
Q 022879          184 SFDCAGLNKTMSTALGATCA  203 (290)
Q Consensus       184 vid~~g~~~~~~~~~~~l~~  203 (290)
                      ||.+++.+.....+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999986555555555554

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.81  E-value=0.0001  Score=60.42  Aligned_cols=105  Identities=23%  Similarity=0.254  Sum_probs=71.5

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc-----C--CCEEEecCCCcccHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI-----G--ADNIVKVSTNLQDIAEEV  170 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l-----g--~~~~~~~~~~~~~~~~~~  170 (290)
                      .+....++++++||-.|+| .|..+..+++..+ ...+++++.+++..+.+++.     |  ...+.....   +..+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~---d~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC---chHhc-
Confidence            3455678999999999988 5888889998753 33799999999888777542     3  222211111   11110 


Q ss_pred             HHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEecc
Q 022879          171 EKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       171 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  212 (290)
                          ......+|+|+.....+ ..+..+.+.|+++|+++.+..
T Consensus       166 ----~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          166 ----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             ----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             ----CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence                00235699998766554 578889999999999988754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.75  E-value=0.00029  Score=58.55  Aligned_cols=111  Identities=14%  Similarity=0.136  Sum_probs=77.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.+.+++|.|+|.+|..+++.++.+|+ .|++.+++.++.+.+.++|.. .+.+    .+    +.++    -...|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~----~~----l~~~----l~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT----DE----LKEH----VKDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG----GG----HHHH----STTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch----hh----HHHH----hhCCCEEE
Confidence            368899999999999999999999999 799999998887766677753 2221    12    2222    24689999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEE
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  232 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  232 (290)
                      .+++..-.-...++.+++++.++.++.......+  .....+.+.+.
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i  265 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL  265 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence            9998632223466788999999999864433323  33333444443

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.65  E-value=0.00053  Score=59.29  Aligned_cols=94  Identities=16%  Similarity=0.155  Sum_probs=71.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..-.|++++|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|... .       ++    .++.    ...|+
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v-------~L----eElL----~~ADI  305 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V-------TL----DDAA----STADI  305 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C-------CH----HHHG----GGCSE
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c-------cH----HHHH----hhCCE
Confidence            34589999999999999999999999999 6899988887765555566432 1       22    2221    35899


Q ss_pred             EEEccCCHHHH-HHHHHHhccCCEEEEeccCC
Q 022879          184 SFDCAGLNKTM-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       184 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++.+.|....+ ...+..+++++.++..|...
T Consensus       306 Vv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          306 VVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             EEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             EEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            99999864443 57889999999999998654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.64  E-value=0.00047  Score=55.79  Aligned_cols=82  Identities=17%  Similarity=0.247  Sum_probs=54.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-.+ +++.+.+++..+. -+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999987 9999999999889999 688888888776644 344432 222222222 2333333333332 24799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        85 ~lv~nAg~   92 (255)
T 4eso_A           85 LLHINAGV   92 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.64  E-value=0.0012  Score=48.11  Aligned_cols=96  Identities=11%  Similarity=0.056  Sum_probs=66.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      -.++++|.|.|.+|...++.++..|. .|++++.++++.+.++..|...+. -+..+++   .+++   .+-..+|+++-
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~~---~l~~---a~i~~ad~vi~   77 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANEE---IMQL---AHLECAKWLIL   77 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSHH---HHHH---TTGGGCSEEEE
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCHH---HHHh---cCcccCCEEEE
Confidence            35689999999999999999999999 599999999999988888765433 2222222   2322   23357999999


Q ss_pred             ccCCHHHHH---HHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMS---TALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~---~~~~~l~~~G~~v~~  210 (290)
                      +++.+....   ...+.+.+..+++..
T Consensus        78 ~~~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           78 TIPNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             ECCChHHHHHHHHHHHHHCCCCeEEEE
Confidence            999754322   234445556666543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.63  E-value=0.0013  Score=50.25  Aligned_cols=95  Identities=18%  Similarity=0.180  Sum_probs=65.3

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHH-hCCCccEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi  185 (290)
                      +++|+|.|.|.+|...++.++.. |. .|++++.++++.+.++..|...+.- +..+.   +.+.   +. +-.++|++|
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~~~---~~l~---~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DATDP---DFWE---RILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTTCH---HHHH---TBCSCCCCCEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCCCH---HHHH---hccCCCCCCEEE
Confidence            66899999999999999999998 98 5889999999998888888664431 22111   1222   11 245799999


Q ss_pred             EccCCHHHHHHHHHHh---ccCCEEEEe
Q 022879          186 DCAGLNKTMSTALGAT---CAGGKVCLV  210 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l---~~~G~~v~~  210 (290)
                      .+++...........+   .+..+++..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          111 LAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             ECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             EeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9999755443443343   334465543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.60  E-value=0.0015  Score=53.93  Aligned_cols=106  Identities=20%  Similarity=0.153  Sum_probs=66.6

Q ss_pred             CCCCeEEEECC-CH--HHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCc-ccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGA-GP--IGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~--vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      -.++++||+|+ |.  +|.+.++.+...|+ .|+.++++++..+.+    +..+....+..+-.+ +++.+.++++.+. 
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK-  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-
Confidence            35789999987 66  99999998888999 578887876544433    334433333333222 2333334444332 


Q ss_pred             CCCccEEEEccCCH--------------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          178 GTGIDVSFDCAGLN--------------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       178 ~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      -+++|++|++.|..              +               ..+.++..++++|+++.++..
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            34799999998842              1               122345556678999998753

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.59  E-value=0.00012  Score=61.82  Aligned_cols=105  Identities=18%  Similarity=0.214  Sum_probs=68.3

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc----C-------------CCEEEecC
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI----G-------------ADNIVKVS  160 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g-------------~~~~~~~~  160 (290)
                      .+....+.++++||-.|+|+ |..++.+++..|. ..+++++.+++..+.+++.    +             .-.++.-+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44455788999999999877 8888888888764 4799999999887777542    1             11122111


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEecc
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  212 (290)
                        ..+.   ...+   ....||+|+-....+ ..+..+.+.|+++|+++.+..
T Consensus       176 --~~~~---~~~~---~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          176 --ISGA---TEDI---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             --TTCC---C----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             --hHHc---cccc---CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence              1111   0011   123599998765543 357888999999999997654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.59  E-value=0.0002  Score=62.81  Aligned_cols=91  Identities=19%  Similarity=0.276  Sum_probs=70.5

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.|++++|.|+|++|...++.++..|+ .|++++.++.+.+.+...+.+ +.+    .++           ....+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~----lee-----------~~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLT----LED-----------VVSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC----GGG-----------TTTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCC----HHH-----------HHHhcCEEE
Confidence            478999999999999999999999999 688899998887777666643 111    111           124689999


Q ss_pred             EccCCHHHHH-HHHHHhccCCEEEEeccC
Q 022879          186 DCAGLNKTMS-TALGATCAGGKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~  213 (290)
                      ++.|....+. ..++.+++++.++..|..
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            9998755443 377889999999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.56  E-value=0.0014  Score=53.22  Aligned_cols=82  Identities=15%  Similarity=0.205  Sum_probs=52.2

Q ss_pred             CCCeEEEECC-CH--HHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCC--CEEEecCCC-cccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GP--IGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGA--DNIVKVSTN-LQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~--vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~--~~~~~~~~~-~~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ |.  +|.+.++.+...|+ .|+.++++++..+.++    .++.  ...+..+-. .+++.+.++++.+.
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999987 66  99999998888899 5777877765444433    3332  223333322 23444444444333


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        85 ~-g~id~li~~Ag~   97 (266)
T 3oig_A           85 V-GVIHGIAHCIAF   97 (266)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             h-CCeeEEEEcccc
Confidence            3 469999999874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.52  E-value=0.0017  Score=52.48  Aligned_cols=82  Identities=22%  Similarity=0.344  Sum_probs=54.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEE-EecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNI-VKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+..    ++.|.... +..|-. .++..+.+++..+ ..+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA-EGI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HCC
Confidence            5789999987 9999999999999999 688888887765432    33443322 222222 2233344444433 345


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        86 ~iDiLVNNAG~   96 (255)
T 4g81_D           86 HVDILINNAGI   96 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999986

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.48  E-value=0.0018  Score=52.33  Aligned_cols=82  Identities=15%  Similarity=0.278  Sum_probs=53.4

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC--EEEecCC-CcccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD--NIVKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+    ++++..  ..+..|- ..++..+.+++..+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999986 5  799999998889999 688888887665544    234422  2332222 223344444444333


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        84 ~-G~iD~lvnnAg~   96 (256)
T 4fs3_A           84 V-GNIDGVYHSIAF   96 (256)
T ss_dssp             H-CCCSEEEECCCC
T ss_pred             h-CCCCEEEecccc
Confidence            3 479999999874

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.46  E-value=0.0017  Score=47.13  Aligned_cols=77  Identities=13%  Similarity=0.207  Sum_probs=56.8

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      ..+++|.|+|.+|...++.+...|. .|++++.++++.+.++..+... +..+..++   +.+++.   .-.++|++|.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~-~~gd~~~~---~~l~~~---~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDA-VIADPTDE---SFYRSL---DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEE-EECCTTCH---HHHHHS---CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcE-EECCCCCH---HHHHhC---CcccCCEEEEe
Confidence            4689999999999999999999999 5899999999988888777543 32222222   223221   34579999999


Q ss_pred             cCCHH
Q 022879          188 AGLNK  192 (290)
Q Consensus       188 ~g~~~  192 (290)
                      ++...
T Consensus        78 ~~~~~   82 (141)
T 3llv_A           78 GSDDE   82 (141)
T ss_dssp             CSCHH
T ss_pred             cCCHH
Confidence            99643

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.44  E-value=0.0057  Score=49.49  Aligned_cols=82  Identities=22%  Similarity=0.270  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-. .+++.+.++++.+.. +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-G  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            5789999987 9999999998888899 588888888775543 2   23322 22222222 223333444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999885

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.43  E-value=0.0014  Score=52.86  Aligned_cols=81  Identities=25%  Similarity=0.288  Sum_probs=54.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+..+++.. ..+..+-.+ +++.+.+++..+.. +++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYAL-GRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            4678999988 9999999998888999 67888787766445555543 444333222 23334444433323 469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.40  E-value=0.0022  Score=49.93  Aligned_cols=103  Identities=13%  Similarity=0.110  Sum_probs=70.7

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~  173 (290)
                      .+....+.++++||-.|+|. |..++.+++. +. .+++++.+++..+.+++    ++.. .+........+   .+.  
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~--  118 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---ALA--  118 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GGT--
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hcc--
Confidence            34456788999999999876 8888888888 76 79999999998887654    3433 22111111111   110  


Q ss_pred             HHHhCCCccEEEEccCCHH-HHHHHHHHhccCCEEEEecc
Q 022879          174 QKAMGTGIDVSFDCAGLNK-TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~  212 (290)
                         ....+|+|+...+... .+..+.+.|+++|+++....
T Consensus       119 ---~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          119 ---DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             ---TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             ---cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence               1246999997654322 67889999999999987653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.39  E-value=0.002  Score=51.69  Aligned_cols=80  Identities=19%  Similarity=0.197  Sum_probs=54.8

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      +++||+|+ +++|.+.++.+...|+ .|+.++.++++.+.+.+-+.. ..+..+-. .++..+.+++..+.. +++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            68999987 9999999999999999 688899998887765544322 22322222 233444444443333 4799999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      +++|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.37  E-value=0.0042  Score=48.55  Aligned_cols=91  Identities=15%  Similarity=0.255  Sum_probs=61.6

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|||+|+ |.+|...++.+...|. .|+++++++++.+.+. .+. .++..+-.+.+.    +.+     .++|+||+++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~-~~~~~D~~d~~~----~~~-----~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDI-NILQKDIFDLTL----SDL-----SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSS-EEEECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCC-eEEeccccChhh----hhh-----cCCCEEEECC
Confidence            6899998 9999999999999998 6888888887766443 222 233322222222    222     4699999999


Q ss_pred             CCH--------HHHHHHHHHhccC--CEEEEecc
Q 022879          189 GLN--------KTMSTALGATCAG--GKVCLVGM  212 (290)
Q Consensus       189 g~~--------~~~~~~~~~l~~~--G~~v~~g~  212 (290)
                      |..        .....+++.++..  ++++.++.
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            863        2345566666554  68888764

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.36  E-value=0.00067  Score=58.62  Aligned_cols=93  Identities=22%  Similarity=0.281  Sum_probs=70.8

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .-.|.+|+|.|.|.+|...++.++.+|+ .|++++.++.+...+...|....        +    +.++    -...|++
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------s----L~ea----l~~ADVV  270 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------L----VEDV----VEEAHIF  270 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------C----HHHH----TTTCSEE
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------C----HHHH----HhhCCEE
Confidence            3478999999999999999999999999 69999999887776666665321        2    2222    1358999


Q ss_pred             EEccCCHHHHH-HHHHHhccCCEEEEeccCC
Q 022879          185 FDCAGLNKTMS-TALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       185 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  214 (290)
                      +.+.+....+. ..++.|+++..++.++...
T Consensus       271 ilt~gt~~iI~~e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          271 VTTTGNDDIITSEHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             EECSSCSCSBCTTTGGGCCTTEEEEECSSSG
T ss_pred             EECCCCcCccCHHHHhhcCCCcEEEEeCCCC
Confidence            99887644444 5678889999999988543

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.36  E-value=0.0037  Score=50.87  Aligned_cols=106  Identities=17%  Similarity=0.283  Sum_probs=65.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH----HHHcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV----AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|++ |+.+. +++++.+.    ++..+.. ..+..+-. .+++.+.+++..+.. 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAK-VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 99999999999899994 55544 44444332    2334433 22222222 223334444443333 


Q ss_pred             CCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEeccCC
Q 022879          179 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       179 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +++|+++++.|..          +               ..+.++..+.++|+++.++...
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            4699999998851          1               2234556677789999998643

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.0055  Score=49.93  Aligned_cols=104  Identities=16%  Similarity=0.309  Sum_probs=64.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH-H---HHcCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV-A---KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~-~---~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+ .+++++.+. .   +..+... .+..+-. .+++.+.+++..+.. 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999998888999 46665 444444332 2   3334332 2222222 223344444443333 


Q ss_pred             CCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +++|++|+++|..          +               ..+.+...+++.|+++.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            4799999998741          1               22335556667899999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.31  E-value=0.0022  Score=51.55  Aligned_cols=82  Identities=20%  Similarity=0.297  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc-------CCCEEEecCCCc-ccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI-------GADNIVKVSTNL-QDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l-------g~~~~~~~~~~~-~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+. ++       +....+..+-.+ ++..+.++++.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999988 9999999998888899 6888888887755432 22       222233222222 2333444444333


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        85 ~-g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 Y-GAVDILVNAAAM   97 (250)
T ss_dssp             H-CCEEEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            3 479999999985

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.31  E-value=0.0034  Score=50.28  Aligned_cols=81  Identities=26%  Similarity=0.334  Sum_probs=54.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++++. ..+..+-.+ +++.+.+++..+.. +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHL-GRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            4678999988 9999999999888999 688888888776544 44553 233323222 23333444433323 46999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.0022  Score=52.23  Aligned_cols=105  Identities=17%  Similarity=0.211  Sum_probs=62.5

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      ..++++||+|+ +++|.+.++.+...|++ |+.+ .+++++.+.+    +..+.. ..+..+-.+ +++.+.++++.+..
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999987 99999999888888995 5554 5555444332    333432 222222222 23333344443323


Q ss_pred             CCCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEecc
Q 022879          178 GTGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       178 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  212 (290)
                       +++|++|+++|..          +               ..+.++..++.+|+++.++.
T Consensus       104 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          104 -GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence             4799999999741          1               12234555667799999875

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.30  E-value=0.0081  Score=46.46  Aligned_cols=105  Identities=15%  Similarity=0.165  Sum_probs=72.0

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      .+....++++++||-.|+|. |..++.+++......+++++.+++..+.+++    .+...+-.......+   .+    
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~----  103 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE---GL----  103 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT---TC----
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh---hh----
Confidence            34456788999999999875 8888899988644589999999998887754    333221111111111   11    


Q ss_pred             HHhCCCccEEEEccC---CHHHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       .....+|+|+....   ....+..+.+.|+++|+++....
T Consensus       104 -~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          104 -DDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             -TTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             -hcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence             01256999998765   24577889999999999998653

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.29  E-value=0.0035  Score=50.57  Aligned_cols=82  Identities=24%  Similarity=0.311  Sum_probs=55.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..|... .+..|- ..++..+.+++..+.. +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-S   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            5789999987 9999999998889999 688889998775533    3345432 222222 2333444444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++++++|.
T Consensus        84 ~iDiLVNNAGi   94 (254)
T 4fn4_A           84 RIDVLCNNAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            69999999873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.28  E-value=0.0035  Score=49.97  Aligned_cols=78  Identities=24%  Similarity=0.295  Sum_probs=53.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+.+++++++  ..++++. ..+..+-.+++..+.+++..+.. +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEAL-GGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHHH-TSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHHc-CCCCEEEE
Confidence            568999988 9999999999988999 58888887765  3344553 23332322255555555544333 46999999


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9874

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.28  E-value=0.0046  Score=50.63  Aligned_cols=105  Identities=21%  Similarity=0.301  Sum_probs=63.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HH----HHHHcCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LS----VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~----~~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.++++.++ .+    .++..+... .+..+-. .+++.+.++++.+.. 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999999988999 57777666533 22    223345332 2222222 223333344433323 


Q ss_pred             CCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          179 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       179 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +++|++|++.|..          +               ..+.+...++..|+++.++..
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            4699999998841          1               123344555567999998753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.27  E-value=0.0055  Score=51.21  Aligned_cols=82  Identities=12%  Similarity=0.211  Sum_probs=53.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCC---CEEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGA---DNIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~---~~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +.   .+.   ...+..+-. .+++.+.++++.+ .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA-R   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH-h
Confidence            4679999988 9999999998888999 688888888775543 22   222   122222222 2334444444433 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      .+++|++|++.|.
T Consensus        85 ~g~id~lv~nAg~   97 (319)
T 3ioy_A           85 FGPVSILCNNAGV   97 (319)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCCCEEEECCCc
Confidence            3579999999983

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.27  E-value=0.0021  Score=51.16  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=53.4

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +.++.. ..+..+-. .++..+.+++..+.. +++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG-GLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH-CSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-CCCcE
Confidence            578999988 9999999998888999 688888988776644 334321 12222222 233333444443323 47999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999885

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.25  E-value=0.0041  Score=50.24  Aligned_cols=82  Identities=27%  Similarity=0.325  Sum_probs=54.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.++++.++.+. .++++.. ..+..+-.+ +++.+.+++..+ .-+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE-HAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH-HSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHH-HcCCCC
Confidence            4689999987 9999999998888999 68888888776553 3455533 223222222 233334444433 234799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999985

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.25  E-value=0.0023  Score=51.51  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=53.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-. .+++.+.++++.+ . +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~-g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA-H-A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH-H-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh-h-C
Confidence            5688999987 9999999999989999 688888887765433 22   2422 22222222 2233344444433 3 6


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999999984

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.25  E-value=0.0027  Score=50.95  Aligned_cols=82  Identities=22%  Similarity=0.317  Sum_probs=54.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .+..+- ..++..+.++++.+.. +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            5789999987 9999999999999999 688888888776543 4455332 222222 2223333444443323 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.24  E-value=0.00088  Score=48.66  Aligned_cols=76  Identities=13%  Similarity=0.258  Sum_probs=52.7

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +++|+|.|+|.+|...++.+...|. .+++++.++++.+.++..+.. .+..+.  .+ .+.+.+.   .-.++|+++.+
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~-~~~~d~--~~-~~~l~~~---~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATH-AVIANA--TE-ENELLSL---GIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSE-EEECCT--TC-HHHHHTT---TGGGCSEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCE-EEEeCC--CC-HHHHHhc---CCCCCCEEEEC
Confidence            5689999999999999999999998 478888888877766555543 232221  12 1222221   23469999999


Q ss_pred             cCCH
Q 022879          188 AGLN  191 (290)
Q Consensus       188 ~g~~  191 (290)
                      ++.+
T Consensus        78 ~~~~   81 (144)
T 2hmt_A           78 IGAN   81 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9964

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.24  E-value=0.0075  Score=48.85  Aligned_cols=82  Identities=18%  Similarity=0.214  Sum_probs=52.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCC------CEEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA------DNIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~------~~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+. .+++..      ...+..+-. .+++.+.+++..+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4678999988 9999999999888999 68888888766543 233321      122222222 223333344333322


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|++.|.
T Consensus        85 -g~id~lv~~Ag~   96 (267)
T 2gdz_A           85 -GRLDILVNNAGV   96 (267)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             469999999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.24  E-value=0.0025  Score=52.82  Aligned_cols=83  Identities=12%  Similarity=0.143  Sum_probs=52.2

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCC--EEEecCCCc--ccHHHHHHHHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD--NIVKVSTNL--QDIAEEVEKIQKA  176 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~--~~~~~~~~~--~~~~~~~~~~~~~  176 (290)
                      ..++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. ++++   +..  ..+..+-.+  ++..+.++.+.+ 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~-   87 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT-   87 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH-
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH-
Confidence            35789999988 9999999998888999 68888888876443 2332   221  222223222  223333333322 


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      ..+++|++|+++|.
T Consensus        88 ~~g~iD~lv~nAg~  101 (311)
T 3o26_A           88 HFGKLDILVNNAGV  101 (311)
T ss_dssp             HHSSCCEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence            22479999999985

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.22  E-value=0.004  Score=50.68  Aligned_cols=82  Identities=22%  Similarity=0.264  Sum_probs=54.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++.....+..+-.+ +++.+.+++..+.. +++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            4689999987 9999999999988999 688888888776544 344432333333222 23333334333322 46999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|++.|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.22  E-value=0.0026  Score=51.43  Aligned_cols=82  Identities=28%  Similarity=0.334  Sum_probs=54.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-Hc---CCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+. ++   +.. ..+..+-. .++..+.++++.+.. +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-G   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4688999987 9999999999889999 5888888887765443 33   222 22222222 223334444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (257)
T 3imf_A           83 RIDILINNAAG   93 (257)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.21  E-value=0.0026  Score=51.56  Aligned_cols=82  Identities=17%  Similarity=0.210  Sum_probs=53.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cC--CCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IG--ADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg--~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+  ....+..+-.+ +++.+.+++..+.. 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF-   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 9999999999889999 688888888775533 22   33  11222222222 23333344433323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.21  E-value=0.0034  Score=50.25  Aligned_cols=82  Identities=21%  Similarity=0.289  Sum_probs=53.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcC--CCEEEecCC--Cc-ccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIG--ADNIVKVST--NL-QDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg--~~~~~~~~~--~~-~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+.    ..+  ...++..+-  .+ +++.+.++++.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999987 9999999999889999 6888888887765432    233  222333222  22 2233333333332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|++|++.|.
T Consensus        92 ~-g~id~lv~nAg~  104 (247)
T 3i1j_A           92 F-GRLDGLLHNASI  104 (247)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            3 479999999884

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.19  E-value=0.0037  Score=50.99  Aligned_cols=82  Identities=24%  Similarity=0.238  Sum_probs=51.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++++..+..+++   +.. ..+..+-.+.+-.+.+.+..... +++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT-RRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc-CCC
Confidence            5789999987 9999999998889999 577777766555555443   322 22222222222222222222222 479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|+++|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.19  E-value=0.0039  Score=50.09  Aligned_cols=82  Identities=21%  Similarity=0.264  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-.+ +++.+.++++.+.. +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            5789999988 9999999999999999 588888888775543 22   2322 222222222 23333344443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.19  E-value=0.0021  Score=51.11  Aligned_cols=98  Identities=18%  Similarity=0.173  Sum_probs=64.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .+.+|||+|+ |.+|...++.+...|. .|+++++++++.+.+...+...++..+-. ++    +.+.    -.++|++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~----~~~~----~~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-ED----FSHA----FASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SC----CGGG----GTTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HH----HHHH----HcCCCEEE
Confidence            5789999998 9999999999988999 68888899888877766665123332221 22    2111    24799999


Q ss_pred             EccCCHH-------------HHHHHHHHhcc--CCEEEEeccCC
Q 022879          186 DCAGLNK-------------TMSTALGATCA--GGKVCLVGMGH  214 (290)
Q Consensus       186 d~~g~~~-------------~~~~~~~~l~~--~G~~v~~g~~~  214 (290)
                      +++|...             ....+++.++.  .++++.++...
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            9998521             12233444432  37899887543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.19  E-value=0.0031  Score=51.22  Aligned_cols=82  Identities=24%  Similarity=0.353  Sum_probs=54.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+-.+ +++.+.++++.+. .+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCCC
Confidence            5789999987 9999999999989999 68888888877554 45566432 22222222 2333333333322 24799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|+++|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.18  E-value=0.0047  Score=49.67  Aligned_cols=82  Identities=18%  Similarity=0.307  Sum_probs=53.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----C-CCEEEecCC--Cc-ccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----G-ADNIVKVST--NL-QDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g-~~~~~~~~~--~~-~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +.+    + ....+..+-  .+ ++..+.++++.+ 
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   88 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV-   88 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH-
Confidence            5789999987 9999999998888999 688888888775543 222    2 222232222  22 223333333333 


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      ..+++|+++++.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence            33579999999984

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.18  E-value=0.0041  Score=50.88  Aligned_cols=82  Identities=27%  Similarity=0.340  Sum_probs=54.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .+..+-. .++..+.+++..+.. +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW-GRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5789999987 9999999998888999 688888888765543 4455332 2222222 223333344443333 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.18  E-value=0.0042  Score=49.70  Aligned_cols=82  Identities=23%  Similarity=0.238  Sum_probs=53.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-.+ +++.+.++++.+ ...
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-ENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcC
Confidence            4678999987 9999999998888999 688888887765543    223432 222222222 233333444432 345


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.18  E-value=0.0052  Score=49.26  Aligned_cols=82  Identities=28%  Similarity=0.365  Sum_probs=52.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-.+ +++.+.+++..+.. +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-G   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            4678999987 9999999998888999 688888887765533 22   2432 222222222 23333334333322 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (247)
T 2jah_A           84 GLDILVNNAGI   94 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.17  E-value=0.0045  Score=49.98  Aligned_cols=82  Identities=27%  Similarity=0.285  Sum_probs=55.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-. .++..+.++++.+.. +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF-GKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4679999988 9999999998888999 688888988876644 445533 22322222 223334444443333 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.16  E-value=0.0043  Score=51.37  Aligned_cols=82  Identities=28%  Similarity=0.407  Sum_probs=53.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-.+ +++.+.++++.+.. +
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-G  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-C
Confidence            5789999988 9999999999989999 688888888776543 22   2322 222222222 23333344433322 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus       108 ~id~lvnnAg~  118 (301)
T 3tjr_A          108 GVDVVFSNAGI  118 (301)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.16  E-value=0.0042  Score=50.80  Aligned_cols=82  Identities=22%  Similarity=0.353  Sum_probs=53.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCC-CEEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGA-DNIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+. ...+..+-. .+++.+.++++.+.. +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-G  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5689999987 9999999998888999 688888887664433 2   2332 223332222 223444444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999885

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.16  E-value=0.006  Score=49.08  Aligned_cols=77  Identities=16%  Similarity=0.084  Sum_probs=51.6

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH---HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+.   ..+..... +  +.+++.+.+++..+.. +++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~-~--d~~~v~~~~~~~~~~~-g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-M--SEQEPAELIEAVTSAY-GQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-C--CCCSHHHHHHHHHHHH-SCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEE-E--CHHHHHHHHHHHHHHh-CCCCEE
Confidence            46899987 9999999999989999 6888888776654432   22432221 1  2345555555544333 479999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            999874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.16  E-value=0.0033  Score=50.82  Aligned_cols=83  Identities=13%  Similarity=0.210  Sum_probs=53.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-. .+++.+.+++..+..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999987 9999999998888999 688888887765432 22   2322 12222222 22333344443332325


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        87 ~id~lv~~Ag~   97 (260)
T 2ae2_A           87 KLNILVNNAGI   97 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.16  E-value=0.0034  Score=51.24  Aligned_cols=82  Identities=18%  Similarity=0.215  Sum_probs=54.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-CEEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++. ...+..+-.+ +++.+.+++..+.. +++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF-GRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5678999987 9999999998888999 688888888776543 44542 2233222222 23333444443333 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.16  E-value=0.0047  Score=50.07  Aligned_cols=82  Identities=20%  Similarity=0.234  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-. .+++.+.+++..+.. +++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence            4678999988 9999999999888999 688888888776544 445422 22222222 223333344433322 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.16  E-value=0.0053  Score=49.80  Aligned_cols=82  Identities=24%  Similarity=0.332  Sum_probs=52.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++     +.. ..+..+-. .+++.+.+++..+..
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999987 9999999998888999 688888887765433 222     322 22222222 223334444443323


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|++.|.
T Consensus        91 -g~id~lv~nAg~  102 (267)
T 1iy8_A           91 -GRIDGFFNNAGI  102 (267)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             469999999873

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0046  Score=50.72  Aligned_cols=82  Identities=23%  Similarity=0.304  Sum_probs=53.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      +++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.. ..+..+-.+ ++..+.++++.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF-G  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5689999987 9999999998888999 688888888765543 333   222 222222222 23344444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0029  Score=51.43  Aligned_cols=82  Identities=23%  Similarity=0.276  Sum_probs=53.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..+-. .++..+.+++..+.. +
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4678999987 9999999998889999 588888888775543 22   24322 2222222 223333344443323 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.16  E-value=0.0015  Score=53.22  Aligned_cols=81  Identities=17%  Similarity=0.160  Sum_probs=51.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+..-. ...+..+-. .+++.+.+++..+.. +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPN-TLCAQVDVTDKYTFDTAITRAEKIY-GPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTT-EEEEECCTTCHHHHHHHHHHHHHHH-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCC-ceEEEecCCCHHHHHHHHHHHHHHC-CCCCEE
Confidence            4678999988 9999999998888999 5788888877654322111 122222222 223333444433323 479999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.15  E-value=0.0043  Score=50.00  Aligned_cols=82  Identities=24%  Similarity=0.331  Sum_probs=53.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-. .+++.+.+++..+.. +++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999988 9999999999988999 688888887765543 445422 22222222 223444444443323 3699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.15  E-value=0.011  Score=48.42  Aligned_cols=96  Identities=14%  Similarity=0.084  Sum_probs=59.5

Q ss_pred             eEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|||+|+ |.+|...++.+... |. .|+++.+++++...+...+.. ++..+-.  +. +.+.+.    -.++|+||++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~-~~~~D~~--d~-~~l~~~----~~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVS-VRQLDYF--NQ-ESMVEA----FKGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBE-EEECCTT--CH-HHHHHH----TTTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCE-EEEcCCC--CH-HHHHHH----HhCCCEEEEe
Confidence            5899998 99999999988877 88 477777887764433333332 2322222  21 233332    2479999999


Q ss_pred             cCCH-------HHHHHHHHHhccC--CEEEEeccCC
Q 022879          188 AGLN-------KTMSTALGATCAG--GKVCLVGMGH  214 (290)
Q Consensus       188 ~g~~-------~~~~~~~~~l~~~--G~~v~~g~~~  214 (290)
                      .+..       .....+++.++..  ++++.++...
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            8852       2234455555544  5888887543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.15  E-value=0.0037  Score=47.97  Aligned_cols=102  Identities=18%  Similarity=0.214  Sum_probs=64.3

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC---------CeEEEEeCChhHHHHHHHcCCCEEE-ecCCCcccHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA---------PRIVIVDVDDYRLSVAKEIGADNIV-KVSTNLQDIAEEVEK  172 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~---------~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~  172 (290)
                      ..++++++||..|+|+ |..+..+++..|.         ..+++++.++...     +.....+ ..+-...+....+.+
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHH
Confidence            3468899999999987 8899999999874         4799999887431     1111222 211111122222222


Q ss_pred             HHHHhCCCccEEEE-----ccCCH------------HHHHHHHHHhccCCEEEEecc
Q 022879          173 IQKAMGTGIDVSFD-----CAGLN------------KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       173 ~~~~~~~~~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .  ..+..||+|+.     +++..            ..+..+.+.|+++|+++....
T Consensus        92 ~--~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           92 V--LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             H--SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             h--cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            1  12357999995     33321            456678889999999987643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.15  E-value=0.004  Score=50.89  Aligned_cols=82  Identities=23%  Similarity=0.295  Sum_probs=52.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC-CE--EEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGA-DN--IVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~-~~--~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+.+    +..+. ..  .+..+-. .+++.+.++++.+..
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4679999987 9999999998888999 688888887665433    22231 11  2222222 223333344333322


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       .++|++|+++|.
T Consensus       110 -g~iD~vi~~Ag~  121 (279)
T 1xg5_A          110 -SGVDICINNAGL  121 (279)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             469999999873

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.14  E-value=0.0063  Score=50.21  Aligned_cols=105  Identities=18%  Similarity=0.197  Sum_probs=62.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC--hhHHH----HHHHcCCCEE-EecCCCc-ccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLS----VAKEIGADNI-VKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~----~~~~lg~~~~-~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++.+  +++.+    .++..+.... +..+-.+ ++..+.++++.+..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999987 9999999998889999 57776655  22222    2233453322 2222222 22333333333322


Q ss_pred             CCCccEEEEccCCH-----------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          178 GTGIDVSFDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       178 ~~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                       +++|+++++.|..           +               ..+.++..++++|+++.++..
T Consensus       127 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          127 -GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             -TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence             4799999998841           1               112233445567999998753

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.14  E-value=0.00055  Score=54.77  Aligned_cols=102  Identities=17%  Similarity=0.256  Sum_probs=65.0

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      =.|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+....-.. ..+..+-.++   +.++++.+.. +++|++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~-~~~~~Dv~~~---~~v~~~~~~~-g~iDiL   82 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRI-RREELDITDS---QRLQRLFEAL-PRLDVL   82 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTE-EEEECCTTCH---HHHHHHHHHC-SCCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCe-EEEEecCCCH---HHHHHHHHhc-CCCCEE
Confidence            36899999987 9999999999999999 68888888776543211111 1122222222   2344444433 469999


Q ss_pred             EEccCCH--------H---------------HHHHHHHHhc-cCCEEEEeccC
Q 022879          185 FDCAGLN--------K---------------TMSTALGATC-AGGKVCLVGMG  213 (290)
Q Consensus       185 id~~g~~--------~---------------~~~~~~~~l~-~~G~~v~~g~~  213 (290)
                      +++.|..        +               ..+.++..++ .+|++|.++..
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            9999852        1               1222444553 47999998753

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.14  E-value=0.00067  Score=54.06  Aligned_cols=104  Identities=21%  Similarity=0.227  Sum_probs=70.7

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      .+++...++++++||..|+| .|..++.+++..+. .+++++.+++..+.+++    .+...+... .  .+....   +
T Consensus        82 ~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~-~--~d~~~~---~  153 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVI-L--GDGSKG---F  153 (235)
T ss_dssp             HHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEE-E--SCGGGC---C
T ss_pred             HHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEE-E--CCcccC---C
Confidence            34455578899999999988 58889999998874 79999999988777754    343222111 1  111000   1


Q ss_pred             HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                        ....+||+|+.+.........+.+.|+++|+++..-
T Consensus       154 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          154 --PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --CCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence              123459999987765445567888999999987754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.14  E-value=0.0058  Score=49.40  Aligned_cols=82  Identities=27%  Similarity=0.346  Sum_probs=52.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++    +.. ..+..+-. .+++.+.+++..+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF-   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999998888999 688888887765432 222    432 22222222 223333344433322 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        84 g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 GGADILVNNAGT   95 (263)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.14  E-value=0.003  Score=50.73  Aligned_cols=82  Identities=17%  Similarity=0.273  Sum_probs=54.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +.++.. ..+..+-. .++..+.+++..+.. +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEF-GGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-CCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5789999987 9999999999999999 688888888776544 334322 22222222 233344444443323 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.13  E-value=0.0073  Score=49.30  Aligned_cols=82  Identities=22%  Similarity=0.261  Sum_probs=52.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+++++++++.+.+ ++   .+.. ..+..+-. .+++.+.++++.+. -+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999987 9999999999888999 688888887765432 22   2432 22222222 22333334443332 34


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        99 ~iD~lv~~Ag~  109 (277)
T 2rhc_B           99 PVDVLVNNAGR  109 (277)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.12  E-value=0.0036  Score=50.48  Aligned_cols=82  Identities=17%  Similarity=0.195  Sum_probs=53.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-.+ ++..+.++++.+.. +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-G   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999987 9999999998888899 588888887765533    223432 222222222 23333444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.12  E-value=0.0069  Score=48.96  Aligned_cols=82  Identities=21%  Similarity=0.294  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-CEEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +.+.. ...+..+-. .+++.+.+++..+.. +++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL-GGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHH-TCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999987 9999999999888999 688888888776544 33432 122222222 223333444433323 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        89 ~lv~~Ag~   96 (263)
T 3ak4_A           89 LLCANAGV   96 (263)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.12  E-value=0.0029  Score=52.27  Aligned_cols=82  Identities=22%  Similarity=0.268  Sum_probs=53.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---C--CCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---G--ADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g--~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+. .+++   +  ....+..+-.+ +++.+.++++.+.. 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999999889999 68888888766543 3333   2  11222222222 23333344443323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999884

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.12  E-value=0.0061  Score=49.38  Aligned_cols=82  Identities=23%  Similarity=0.209  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-. .++..+.++++.+. -+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA-YG   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999987 9999999998888999 688888887765543 2   23322 22222222 22333344444332 34


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999999865

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.11  E-value=0.0043  Score=50.85  Aligned_cols=82  Identities=27%  Similarity=0.272  Sum_probs=55.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +.++... .+..+-. .++..+.+++..+.. +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4689999987 9999999999989999 688888888776644 4454322 2222222 223344444443333 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.11  E-value=0.0033  Score=50.82  Aligned_cols=104  Identities=13%  Similarity=0.099  Sum_probs=65.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH---HHcCC-CEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA---KEIGA-DNIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~---~~lg~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+   .+.+. ...+..+- ..++..+.+++..+.. ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-GR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            5789999987 9999999998888999 577777776554433   33332 22333222 2233444444444333 47


Q ss_pred             ccEEEEccCCH---------H---------------HHHHHHHHhc-cCCEEEEecc
Q 022879          181 IDVSFDCAGLN---------K---------------TMSTALGATC-AGGKVCLVGM  212 (290)
Q Consensus       181 ~d~vid~~g~~---------~---------------~~~~~~~~l~-~~G~~v~~g~  212 (290)
                      +|+++++.|..         +               ..+.++..|+ .+|++|.++.
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS  140 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISS  140 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEee
Confidence            99999999852         1               1223444553 4699999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.10  E-value=0.0054  Score=50.11  Aligned_cols=82  Identities=17%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCCEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GADNIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+. .+++   +....+..+-.+ +++.+.++++.+ .-++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGE-LSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHH-HCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHH-hcCC
Confidence            4678999988 9999999999888999 68888888776543 3333   211122222222 223333333332 2347


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus       106 iD~lvnnAg~  115 (276)
T 2b4q_A          106 LDILVNNAGT  115 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.10  E-value=0.0059  Score=48.98  Aligned_cols=82  Identities=20%  Similarity=0.239  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HHHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  181 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++ ++.+ .++..+.. ..+..+-.+ +++.+.+++..+.. +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc-CCC
Confidence            4678999987 9999999998888999 577777776 5443 34455533 222222222 23333334333222 479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.10  E-value=0.0044  Score=50.15  Aligned_cols=81  Identities=16%  Similarity=0.201  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++||+|+ +++|.+.++.+...|++ |+.+++++++ .+.++..+.. .+..+-.+ +++.+.++++.+ .-+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~-~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHASVTELRQAGAV-ALYGDFSCETGIMAFIDLLKT-QTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHHHHHHHHHTCE-EEECCTTSHHHHHHHHHHHHH-HCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHhcCCe-EEECCCCCHHHHHHHHHHHHH-hcCCCCE
Confidence            4678999987 99999999988888995 7777777654 3445555643 33323222 233334444433 2347999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.10  E-value=0.0062  Score=48.52  Aligned_cols=79  Identities=29%  Similarity=0.273  Sum_probs=52.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +++....++..+-.  +. +.++++.+ .-+++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~~-~~~~~~~~-~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLG--DW-EATERALG-SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--CH-HHHHHHHT-TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCC--CH-HHHHHHHH-HcCCCCEE
Confidence            4689999988 9999999999988999 688888887766543 44433333333222  22 23444332 22469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0038  Score=51.16  Aligned_cols=82  Identities=22%  Similarity=0.217  Sum_probs=52.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++    +.. ..+..+-.+ +++.+.+++..+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999998888999 688888888765533 222    221 233333222 23444444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.09  E-value=0.0056  Score=48.48  Aligned_cols=81  Identities=26%  Similarity=0.287  Sum_probs=53.0

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ ++++....+..+-.+ +++.+.++++.+.. +++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAF-GELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            568999987 9999999998888999 688888887766543 444422333333222 23333344333322 369999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        83 i~~Ag~   88 (234)
T 2ehd_A           83 VNNAGV   88 (234)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.09  E-value=0.0045  Score=46.58  Aligned_cols=104  Identities=17%  Similarity=0.238  Sum_probs=71.1

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +....++++.+||-.|+|. |..+..+++..+...+++++.+++..+.+++    .+.. .+ .+.....+   .+    
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~---~~----   88 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR---AF----   88 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG---GG----
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh---hh----
Confidence            3445678899999999886 8889999988744479999999988887764    3433 22 22111111   11    


Q ss_pred             HHhCCCccEEEEccCCH--HHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCAGLN--KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~--~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ......||+|+......  ..+..+.+.|+++|+++....
T Consensus        89 ~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           89 DDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             GGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             hccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            11125799999765432  368889999999999987653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.09  E-value=0.005  Score=50.83  Aligned_cols=82  Identities=11%  Similarity=0.167  Sum_probs=53.8

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    +..+....+..+-.+ +++.+.++++.+.. 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW-  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 5  999999998888899 588888886554433    334443444333222 23444444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999984

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.09  E-value=0.003  Score=50.78  Aligned_cols=106  Identities=18%  Similarity=0.084  Sum_probs=73.4

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc-----CCCEEEecCCCcccHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI-----GADNIVKVSTNLQDIAEEVE  171 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~  171 (290)
                      ..+....+.++++||-.|+|. |..+..+++..| ...+++++.+++..+.+++.     |...+....   .+..+.  
T Consensus        87 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~---~d~~~~--  160 (258)
T 2pwy_A           87 AMVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL---GKLEEA--  160 (258)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE---SCGGGC--
T ss_pred             HHHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE---Cchhhc--
Confidence            344556789999999999886 888899999864 33799999999988877653     522221111   111110  


Q ss_pred             HHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEecc
Q 022879          172 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  212 (290)
                         ......+|+|+.....+ ..+..+.+.|+++|+++.+..
T Consensus       161 ---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          161 ---ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             ---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             ---CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence               00234699998776654 578889999999999998753

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.09  E-value=0.0087  Score=48.68  Aligned_cols=82  Identities=24%  Similarity=0.351  Sum_probs=52.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-.+ +++.+.++++.+. -+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            4689999988 9999999999888999 688888887665433    223432 223222222 2333333333322 34


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.08  E-value=0.0064  Score=49.28  Aligned_cols=82  Identities=18%  Similarity=0.186  Sum_probs=53.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCC--EEEecCCCc-ccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGAD--NIVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~--~~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++    .+..  ..+..+-.+ ++..+.++++.+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4689999987 9999999998888999 588888888765433 22    3322  222222222 23333334433323


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|+++++.|.
T Consensus        86 -g~id~lvnnAg~   97 (265)
T 3lf2_A           86 -GCASILVNNAGQ   97 (265)
T ss_dssp             -CSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999985

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.07  E-value=0.0055  Score=49.71  Aligned_cols=82  Identities=32%  Similarity=0.394  Sum_probs=54.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++    .+.. ..+..+-. .++..+.++++.+.. 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            5689999987 9999999999999999 688888887765533 22    3322 22222222 234444444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.07  E-value=0.008  Score=48.51  Aligned_cols=81  Identities=22%  Similarity=0.293  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----C-CCEEEecCCCc-ccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----G-ADNIVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g-~~~~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++     + ....+..+-.+ +++.+.+++..+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999988 9999999998888999 688888887765433 222     2 12223222222 23333444443222


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                        ++|++|++.|.
T Consensus        85 --gid~lv~~Ag~   95 (260)
T 2z1n_A           85 --GADILVYSTGG   95 (260)
T ss_dssp             --CCSEEEECCCC
T ss_pred             --CCCEEEECCCC
Confidence              39999999883

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.06  E-value=0.0069  Score=49.54  Aligned_cols=83  Identities=18%  Similarity=0.206  Sum_probs=52.3

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      ..++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..+-. .++..+.+++..+.. 
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            46789999987 9999999998888899 588888888765533 22   33222 2222222 223333444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999885

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.06  E-value=0.003  Score=51.74  Aligned_cols=82  Identities=23%  Similarity=0.296  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCE-EEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +++   +... .+..+-.+ ++..+.+++..+.. +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF-G   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            4688999987 9999999998888999 688888888775543 333   2221 22122222 22333333333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        85 ~iD~lvnnAg~   95 (280)
T 3tox_A           85 GLDTAFNNAGA   95 (280)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999883

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.06  E-value=0.0084  Score=48.26  Aligned_cols=81  Identities=28%  Similarity=0.343  Sum_probs=51.9

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-.+ +++.+.+++..+. -++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            468999987 9999999999888999 688888887765433 22   2422 222222222 2333344443332 347


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.05  E-value=0.0024  Score=51.75  Aligned_cols=84  Identities=18%  Similarity=0.278  Sum_probs=53.5

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCC---CCeEEEEeCChhHHHHHHHc---C-CCEEEecCC-CcccHHHHHHHHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFG---APRIVIVDVDDYRLSVAKEI---G-ADNIVKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g---~~~vv~v~~~~~~~~~~~~l---g-~~~~~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      -.+.++||+|+ |.+|...++.+...|   + .|+.+++++++.+.++++   + ....+..+- ..+++.+.++++.+.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            35678999987 999999999888889   7 688888876654433332   2 222333232 233444455544433


Q ss_pred             hCC-CccEEEEccCC
Q 022879          177 MGT-GIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~-~~d~vid~~g~  190 (290)
                      .+. ++|++|+++|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            332 69999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.05  E-value=0.0054  Score=49.90  Aligned_cols=82  Identities=23%  Similarity=0.271  Sum_probs=54.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++.. ..+..+-. .+++.+.+++..+.. +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTF-GRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4789999987 9999999999889999 68888888776553 3455532 22222222 223344444443333 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.04  E-value=0.0045  Score=50.62  Aligned_cols=82  Identities=24%  Similarity=0.340  Sum_probs=54.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-.+ ++..+.++++.+.. +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5689999987 9999999998888899 688888887776543 445532 233222222 23333344443333 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.04  E-value=0.0081  Score=50.71  Aligned_cols=48  Identities=27%  Similarity=0.373  Sum_probs=41.0

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD  154 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  154 (290)
                      -.|++|.|.|.|.+|+.+++.++.+|+ +|++.+.++.+.++.+.+++.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCE
Confidence            478999999999999999999999999 677888887776677777754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.03  E-value=0.01  Score=48.30  Aligned_cols=83  Identities=16%  Similarity=0.252  Sum_probs=53.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-.+ +++.+.+++..+..++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999987 9999999999989999 688888887765432 2   22432 222222222 2333333443332325


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.03  E-value=0.004  Score=50.90  Aligned_cols=82  Identities=17%  Similarity=0.132  Sum_probs=53.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +.++.. ..+..+-.+ +++.+.++++.+.. +++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARY-GRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhC-CCCC
Confidence            4678999987 9999999999888999 688888887765543 445432 222222222 23333444443323 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|+++|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.03  E-value=0.011  Score=46.41  Aligned_cols=97  Identities=19%  Similarity=0.128  Sum_probs=61.2

Q ss_pred             CeEEEECC-CHHHHHHHHHHH-HCCCCeEEEEeCChh-HHHHHHHcC-CCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAAR-AFGAPRIVIVDVDDY-RLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~-~~g~~~vv~v~~~~~-~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +++||+|+ |.+|...++.+. ..|+ .|++++++++ +.+.+...+ ....+..+-.  + .+.++++.    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--d-~~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQ--N-PGXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTT--C-HHHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCC--C-HHHHHHHH----cCCCEE
Confidence            46999997 999999998877 8999 6888888887 655443222 2223322221  2 12344332    368999


Q ss_pred             EEccCCHHH-HHHHHHHhccC--CEEEEeccC
Q 022879          185 FDCAGLNKT-MSTALGATCAG--GKVCLVGMG  213 (290)
Q Consensus       185 id~~g~~~~-~~~~~~~l~~~--G~~v~~g~~  213 (290)
                      |+++|.... ...+++.++..  ++++.++..
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence            999986211 34455555433  688888743

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.03  E-value=0.0047  Score=49.46  Aligned_cols=81  Identities=19%  Similarity=0.273  Sum_probs=53.9

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ..+++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +.+.... ++..+-  .+ .+.+.++.+. -.++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~~-~~~~~~~~~~-~~~i   85 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNL--AN-KEECSNLISK-TSNL   85 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCT--TS-HHHHHHHHHT-CSCC
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCC--CC-HHHHHHHHHh-cCCC
Confidence            357889999987 9999999998888999 688888888776654 3444332 222221  12 2234444332 2469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        86 d~li~~Ag~   94 (249)
T 3f9i_A           86 DILVCNAGI   94 (249)
T ss_dssp             SEEEECCC-
T ss_pred             CEEEECCCC
Confidence            999999984

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.02  E-value=0.0057  Score=49.79  Aligned_cols=82  Identities=20%  Similarity=0.237  Sum_probs=53.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-. .+++.+.+++..+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-G  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-C
Confidence            5678999987 9999999998888999 688888888765533    223322 22222222 223344444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus       105 ~iD~lvnnAg~  115 (270)
T 3ftp_A          105 ALNVLVNNAGI  115 (270)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.02  E-value=0.0087  Score=48.57  Aligned_cols=82  Identities=15%  Similarity=0.312  Sum_probs=53.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++    +... .+..+-. .+++.+.++++.+.. 
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5688999988 9999999999888999 688888887665432 222    4322 2222222 223333444433323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|+++|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.02  E-value=0.005  Score=48.82  Aligned_cols=81  Identities=22%  Similarity=0.218  Sum_probs=51.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H----HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K----EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~----~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +    ..+.. ..+..+-.+ +++.+.++++.+.. +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence            578999987 9999999999999999 588888887765533 2    23332 222222222 22333333333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.00  E-value=0.0095  Score=48.04  Aligned_cols=82  Identities=20%  Similarity=0.301  Sum_probs=52.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC-----------CCEEEecCCC-cccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG-----------ADNIVKVSTN-LQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg-----------~~~~~~~~~~-~~~~~~~~~~  172 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +.+.           ....+..+-. .+++.+.+++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            4678999988 9999999998888899 688888887765543 3331           1122322222 2233334444


Q ss_pred             HHHHhCCCc-cEEEEccCC
Q 022879          173 IQKAMGTGI-DVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~-d~vid~~g~  190 (290)
                      ..+..+ ++ |++|++.|.
T Consensus        85 ~~~~~g-~i~d~vi~~Ag~  102 (264)
T 2pd6_A           85 VQACFS-RPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHHS-SCCSEEEECCCC
T ss_pred             HHHHhC-CCCeEEEECCCc
Confidence            433333 46 999999873

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.00  E-value=0.0064  Score=50.02  Aligned_cols=79  Identities=24%  Similarity=0.419  Sum_probs=53.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-  .+. +.++++.+.. .++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--~d~-~~v~~~~~~~-~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDL--QDL-SSVRRFADGV-SGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCT--TCH-HHHHHHHHTC-CCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCC--CCH-HHHHHHHHhc-CCCCE
Confidence            5789999987 9999999998888999 688888988776654 345422 2222221  222 2344443322 47999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|+++|.
T Consensus        90 lv~nAg~   96 (291)
T 3rd5_A           90 LINNAGI   96 (291)
T ss_dssp             EEECCCC
T ss_pred             EEECCcC
Confidence            9999984

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.00  E-value=0.0081  Score=47.92  Aligned_cols=82  Identities=22%  Similarity=0.317  Sum_probs=52.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H----cCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E----IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~----lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+. .    .+.. ..+..+-. .+++.+.++++.+ .-
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN-LV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH-hc
Confidence            4678999988 9999999998888999 6888888877655332 2    2422 22222222 2233333444332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.00  E-value=0.0029  Score=49.21  Aligned_cols=103  Identities=17%  Similarity=0.118  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      .++...++++.+||-.|+|. |..+..+++. +. .+++++.+++..+.+++    .+...+.....   +..+..    
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~----  138 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHG---DGWQGW----  138 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC----
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEEC---CcccCC----
Confidence            44556788999999999874 8888888888 65 79999999998887754    34322111111   111100    


Q ss_pred             HHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       .....||+|+...........+.+.|+++|+++..-.
T Consensus       139 -~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          139 -QARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             -GGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             -ccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence             1235799999876554444578889999999887643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.00  E-value=0.0066  Score=48.73  Aligned_cols=74  Identities=23%  Similarity=0.237  Sum_probs=49.7

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      -.++++||+|+ |++|.+.++.+...|+ .|+.++++++.   +++++....+ .+- .++..+.++++     .++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~~-----~~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEKV-----KEVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHHS-----CCCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHHh-----cCCCEE
Confidence            46789999988 9999999998888999 68888888743   3445532222 222 23333333222     279999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        86 v~~Ag~   91 (249)
T 1o5i_A           86 VLNAGG   91 (249)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.00  E-value=0.0081  Score=48.57  Aligned_cols=82  Identities=26%  Similarity=0.401  Sum_probs=52.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.. ..+..+-. .+++.+.++++.+.. +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            4678999987 9999999999999999 588888887765533 222   422 22222222 223333344433323 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.00  E-value=0.0052  Score=49.43  Aligned_cols=82  Identities=18%  Similarity=0.291  Sum_probs=53.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-. .+++.+.+++..+.. +++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999987 9999999998888999 688888887765543 445432 22222222 223333344433323 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.00  E-value=0.0058  Score=48.92  Aligned_cols=82  Identities=18%  Similarity=0.196  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC---CCEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG---ADNIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +.+.   ....+..+-.+ +++.+.++++.+.. ++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence            4678999988 9999999998888999 588888887765533 3332   12223222222 23333334333222 46


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (251)
T 1zk4_A           83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.99  E-value=0.011  Score=48.74  Aligned_cols=81  Identities=16%  Similarity=0.221  Sum_probs=52.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .+.++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++    +.. ..+..+-.+ +++.+.+++..+ ..
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK-VA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999988 9999999998888999 688888887765432 222    422 222222222 233333333332 23


Q ss_pred             CCccEEEEccC
Q 022879          179 TGIDVSFDCAG  189 (290)
Q Consensus       179 ~~~d~vid~~g  189 (290)
                      +.+|++|+++|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999988

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.99  E-value=0.0036  Score=50.11  Aligned_cols=79  Identities=18%  Similarity=0.312  Sum_probs=51.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+.++.....+..+-.+.+   .+++..+ .-+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~-~~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK---QIDQFAN-EVERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH---HHHHHHH-HCSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHH---HHHHHHH-HhCCCCEEE
Confidence            4678999988 9999999998888999 68888888776654333332222322222222   2333322 224799999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        80 ~~Ag~   84 (246)
T 2ag5_A           80 NVAGF   84 (246)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.98  E-value=0.0076  Score=48.71  Aligned_cols=82  Identities=22%  Similarity=0.277  Sum_probs=53.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +.+... ..+..+-. .+++.+.+++..+.. +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999987 9999999998888899 688888887765543 344321 22222222 223333444433323 3699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        84 ~lv~~Ag~   91 (260)
T 1nff_A           84 VLVNNAGI   91 (260)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.98  E-value=0.0072  Score=48.46  Aligned_cols=81  Identities=22%  Similarity=0.333  Sum_probs=52.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC--EEEecCCCc-ccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~  181 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+. .++++..  ..+..+-.+ +++.+.+++..+  ..++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCCC
Confidence            4678999988 9999999998888999 68888888776553 3444432  222222222 233333333322  2469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.98  E-value=0.01  Score=48.51  Aligned_cols=82  Identities=20%  Similarity=0.249  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH-HHc----CCC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-KEI----GAD-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~-~~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++ ++++.+.+ +++    +.. ..+..+-. .+++.+.++++.+ .
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD-R  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH-H
Confidence            4679999987 9999999999989999 5777776 44443322 222    222 12222222 2233333444433 2


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|+++++.|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999885

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.98  E-value=0.018  Score=47.14  Aligned_cols=82  Identities=18%  Similarity=0.168  Sum_probs=50.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHH-HH----HcCCC-EEEecCCCc-----ccHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSV-AK----EIGAD-NIVKVSTNL-----QDIAEEVEKI  173 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~-~~----~lg~~-~~~~~~~~~-----~~~~~~~~~~  173 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++ ++.+. .+    ..+.. ..+..+-.+     +++.+.++++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4678999987 9999999998888899 577777776 54432 22    23322 222222222     2333333333


Q ss_pred             HHHhCCCccEEEEccCC
Q 022879          174 QKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~  190 (290)
                      .+.. +++|++|++.|.
T Consensus       101 ~~~~-g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAF-GRCDVLVNNASA  116 (288)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHhc-CCCCEEEECCCC
Confidence            3222 479999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.98  E-value=0.01  Score=47.78  Aligned_cols=81  Identities=25%  Similarity=0.434  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-.+ +++.+.++++.+.. .
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE-G   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            4688999987 9999999998888899 688888887654422    223422 223222222 23333333333222 4


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|++|+++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.98  E-value=0.0022  Score=49.79  Aligned_cols=134  Identities=15%  Similarity=0.229  Sum_probs=79.7

Q ss_pred             cccceeEe-ecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879           62 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus        62 g~~~e~~~-v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      ..|.+|.. .+....+.+++++++..+.. +........+.. .++++.+||-.|+|. |..+..+++ .+...+++++.
T Consensus        16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~   91 (205)
T 3grz_A           16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDI   91 (205)
T ss_dssp             ETTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEES
T ss_pred             ccccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEEC
Confidence            34677776 67777888888887666532 111112222222 256889999998876 677777776 46658999999


Q ss_pred             ChhHHHHHHH----cCCC--EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHH---HHHHHHHHhccCCEEEEec
Q 022879          141 DDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       141 ~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g  211 (290)
                      +++..+.+++    .+..  .++..     ++.+       .....+|+|+.......   .+..+.+.|+++|.++...
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKT-----SLLA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEES-----STTT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEec-----cccc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9988877755    2432  22221     1111       12357999988655321   2444566788999998754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.97  E-value=0.0057  Score=49.91  Aligned_cols=81  Identities=14%  Similarity=0.165  Sum_probs=52.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-.+ ++..+.+++..+ . .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~-g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA-I-A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH-H-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH-h-C
Confidence            5689999987 9999999999888999 688887776654332 2   23422 222222222 334444444433 3 5


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.96  E-value=0.005  Score=50.16  Aligned_cols=82  Identities=23%  Similarity=0.405  Sum_probs=53.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+... .+..+-. .+++.+.++++.+ ..+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE-QGI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH-HTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HCC
Confidence            5789999987 9999999999889999 688888887765433 2   234332 2222222 2233333444433 335


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.96  E-value=0.0049  Score=49.87  Aligned_cols=83  Identities=19%  Similarity=0.311  Sum_probs=52.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-.+ +++.+.+++..+..+.
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 9999999998888999 688888887665432 2   22322 222222222 2233333333222225


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999884

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.95  E-value=0.01  Score=48.48  Aligned_cols=82  Identities=24%  Similarity=0.340  Sum_probs=51.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCE-EEecCCC-cccHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVSTN-LQDIA  167 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~-~~~~~~~-~~~~~  167 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++            .++.+    .++..+... .+..+-. .++..
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999987 9999999999999999 57777775            33322    223344332 2222222 22333


Q ss_pred             HHHHHHHHHhCCCccEEEEccCC
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +.+++..+.. +++|+++++.|.
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTL-GGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHH-TCCCEEEECCCC
T ss_pred             HHHHHHHHhc-CCCCEEEECCCC
Confidence            4444443333 479999999884

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.95  E-value=0.0049  Score=49.71  Aligned_cols=82  Identities=17%  Similarity=0.230  Sum_probs=48.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ ..++++.. ..+..+-. .++..+.+++..+.. +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEF-GHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4688999987 9999999998889999 5777877766544 33444422 22222222 223333444443323 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.95  E-value=0.0041  Score=49.37  Aligned_cols=103  Identities=12%  Similarity=0.077  Sum_probs=69.6

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcC----CCEEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ++...++||++||=.|+|+ |..+..+++..|.+ .|++++.+++..+.+++.-    ....+..+.......       
T Consensus        70 l~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~-------  141 (233)
T 4df3_A           70 LIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY-------  141 (233)
T ss_dssp             CSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-------
T ss_pred             hhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-------
Confidence            4446799999999999877 88888999988764 7999999999887765432    111222222111110       


Q ss_pred             HHhCCCccEEEEccCCH----HHHHHHHHHhccCCEEEEe
Q 022879          175 KAMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  210 (290)
                      ......+|+||....-+    ..+..+.+.|+|+|+++..
T Consensus       142 ~~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          142 RHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            01235689888755543    2566778899999999875

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.94  E-value=0.0028  Score=51.16  Aligned_cols=123  Identities=19%  Similarity=0.302  Sum_probs=73.5

Q ss_pred             ceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH---
Q 022879           74 LCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE---  150 (290)
Q Consensus        74 ~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---  150 (290)
                      ..+.+++++.+...... ........+... ++++++||-.|+|. |..++.+++ .|. .+++++.++...+.+++   
T Consensus        89 ~~~~l~p~~~fgtg~~~-tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~  163 (254)
T 2nxc_A           89 IPLVIEPGMAFGTGHHE-TTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAK  163 (254)
T ss_dssp             EEEECCCC-----CCSH-HHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHH
T ss_pred             eEEEECCCccccCCCCH-HHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHH
Confidence            44566666554443221 111122334333 67889999999866 777777666 577 89999999988877755   


Q ss_pred             -cCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEecc
Q 022879          151 -IGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       151 -lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       .+.. .++.     .++.+.   +   ....||+|+.+...   ...+..+.+.|+++|+++..+.
T Consensus       164 ~~~~~v~~~~-----~d~~~~---~---~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          164 RNGVRPRFLE-----GSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HTTCCCEEEE-----SCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HcCCcEEEEE-----CChhhc---C---cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence             2332 2211     233221   1   23579999976532   2356678888999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.94  E-value=0.0062  Score=49.17  Aligned_cols=82  Identities=20%  Similarity=0.258  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|++ |+.+ .+++++.+.+ +   ..+.. ..+..+-.+ ++..+.+++..+.. 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~-vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYN-IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 99999999999999995 5554 7777665433 2   23432 222222222 23333444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        81 g~id~lv~nAg~   92 (258)
T 3oid_A           81 GRLDVFVNNAAS   92 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999973

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.93  E-value=0.0041  Score=48.53  Aligned_cols=105  Identities=20%  Similarity=0.225  Sum_probs=71.0

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~  172 (290)
                      ..++.....++.+||..|+|. |..+..+++..|. ..+++++.+++..+.+++    .+...+....   .+.....  
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~--  141 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV---GDGTLGY--  141 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE---SCGGGCC--
T ss_pred             HHHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEE---CCcccCC--
Confidence            344556788999999999874 8888899998762 279999999988877754    2322211111   1110000  


Q ss_pred             HHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          173 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                         .....||+|+.+.........+.+.|+++|+++..-
T Consensus       142 ---~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          142 ---EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             ---GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ---CCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence               113579999988765444567888999999998764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.93  E-value=0.0072  Score=48.42  Aligned_cols=82  Identities=17%  Similarity=0.263  Sum_probs=51.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .+.++||+|+ |.+|...++.+...|+ .|+++++++++.+.+ +   ..+.. ..+..+-.+ +++.+.+++..+.. .
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc-C
Confidence            4678999988 9999999998888899 688888887665432 2   23422 222222222 23333333332222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.92  E-value=0.0042  Score=50.33  Aligned_cols=77  Identities=17%  Similarity=0.153  Sum_probs=49.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++     .+.....+..+- ..++..+.+++..+. -+++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQR-LGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHHH-TSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            6889999987 9999999999999999 57777776432     122222222222 223333344444333 3579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      +++.|.
T Consensus        83 VnnAG~   88 (261)
T 4h15_A           83 VHMLGG   88 (261)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.92  E-value=0.0089  Score=48.80  Aligned_cols=81  Identities=20%  Similarity=0.281  Sum_probs=52.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.. ++    .+.. ..+..+-. .++..+.++++.+.. 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999999888999 688888887664432 22    2322 22222222 223334444443333 


Q ss_pred             CCccEEEEccC
Q 022879          179 TGIDVSFDCAG  189 (290)
Q Consensus       179 ~~~d~vid~~g  189 (290)
                      +++|+++++.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999998

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.92  E-value=0.015  Score=49.07  Aligned_cols=132  Identities=14%  Similarity=0.127  Sum_probs=80.3

Q ss_pred             CeEEEECCCHHHHHHHHHHH-H-CCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGAGPIGLVTMLAAR-A-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~-~-~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -+|.|.|+|.+|...++.++ . -+++.+.+.+.++++.+ +.+.+|...++.      ++.    ++.  ...++|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~----~~l--~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYK----DMI--DTENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHH----HHH--TTSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHH----HHh--cCCCCCEEE
Confidence            47899999999988877776 4 46644455678887765 456677644331      332    222  234699999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhh----hcc-CcEEEEeeec--CCcHHHHHHHHHcCCC
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA----AVR-EVDVVGVFRY--KNTWPLCLELLRSGKI  253 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~-~~~i~~~~~~--~~~l~~~~~~~~~g~~  253 (290)
                      .|++...+...+..+++. |+-+.+.-+.....-....+    -.+ ++.+.-....  ...++.+.+++++|.+
T Consensus        77 i~tp~~~h~~~~~~al~~-G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNA-GLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHT-TCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHC-CCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence            999987777788888876 45555532111101111111    123 4444332222  5568889999999887

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.90  E-value=0.0092  Score=47.91  Aligned_cols=83  Identities=22%  Similarity=0.279  Sum_probs=50.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHH-cC-CC-EEEecCCCc--ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKE-IG-AD-NIVKVSTNL--QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~-lg-~~-~~~~~~~~~--~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|...++.+...|++.|+.+++++  +..+.+++ .+ .. ..+..+-.+  +++.+.++++.+.. 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence            4678999987 99999999998889996466776664  33333333 22 11 222222222  23444444443323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        83 g~id~lv~~Ag~   94 (254)
T 1sby_A           83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            469999999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.90  E-value=0.0089  Score=48.64  Aligned_cols=82  Identities=16%  Similarity=0.124  Sum_probs=51.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH-HHc----CCC-EEEecCCC-c----ccHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-KEI----GAD-NIVKVSTN-L----QDIAEEVEKI  173 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~-~~l----g~~-~~~~~~~~-~----~~~~~~~~~~  173 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++ ++++.+.+ +++    +.. ..+..+-. .    +++.+.+++.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999987 9999999998888999 6888877 76655433 222    422 22222222 2    2333333333


Q ss_pred             HHHhCCCccEEEEccCC
Q 022879          174 QKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~  190 (290)
                      .+.. +++|++|++.|.
T Consensus        89 ~~~~-g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRAF-GRCDVLVNNASA  104 (276)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHhc-CCCCEEEECCCC
Confidence            3323 469999999884

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.90  E-value=0.0065  Score=49.79  Aligned_cols=81  Identities=21%  Similarity=0.223  Sum_probs=51.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE--EEecCCCcc-cHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADN--IVKVSTNLQ-DIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~--~~~~~~~~~-~~~~~~~~~~~~~~  178 (290)
                      .+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+.    ..+...  .+..+-.+. ++.+.+++..+.. 
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            4678999988 9999999998888999 6888888887665432    234322  222222222 2333333332222 


Q ss_pred             CCccEEEEc-cC
Q 022879          179 TGIDVSFDC-AG  189 (290)
Q Consensus       179 ~~~d~vid~-~g  189 (290)
                      +++|++|++ .|
T Consensus       105 g~iD~li~naag  116 (286)
T 1xu9_A          105 GGLDMLILNHIT  116 (286)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999998 44

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.90  E-value=0.0091  Score=47.73  Aligned_cols=82  Identities=20%  Similarity=0.342  Sum_probs=51.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++ ++++.+.+ +   ..+.. ..+..+-. .+++.+.+++..+.. 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999998888999 5777766 66654432 2   23432 22222222 223333444433323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999884

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.90  E-value=0.012  Score=46.74  Aligned_cols=78  Identities=27%  Similarity=0.182  Sum_probs=51.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+ +++.....+..+-.+.   +.++++.+ .-+++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~-~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALG-GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHT-TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCCH---HHHHHHHH-HcCCCCEE
Confidence            4678999988 9999999999988999 688888887765543 3333223333222221   23444432 22468999


Q ss_pred             EEccC
Q 022879          185 FDCAG  189 (290)
Q Consensus       185 id~~g  189 (290)
                      |++.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.89  E-value=0.0059  Score=49.08  Aligned_cols=35  Identities=26%  Similarity=0.483  Sum_probs=31.4

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      +.+|+|.|+|++|..+++.+...|...+..++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            46899999999999999999999998888888876

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.89  E-value=0.013  Score=49.78  Aligned_cols=109  Identities=15%  Similarity=0.128  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC----hhH---------HHHHHHcCCCEEE
Q 022879           92 PLSVGVHACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD----DYR---------LSVAKEIGADNIV  157 (290)
Q Consensus        92 ~~~ta~~~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~----~~~---------~~~~~~lg~~~~~  157 (290)
                      .++..+.+++..+ --++.+|+|.|+|..|..+++++..+|.+.++.++++    .++         .++++.....   
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---  251 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---  251 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---
Confidence            3444444555433 2366899999999999999999999999889999887    443         4444443211   


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                         ....++.+.+        .+.|++|-+++..-.-...++.|+++..++.+..+.
T Consensus       252 ---~~~~~L~eav--------~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          252 ---RLSGDLETAL--------EGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             ---CCCSCHHHHH--------TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             ---CchhhHHHHH--------ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence               1223444333        347999999884333446777788777666666544

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.88  E-value=0.006  Score=49.09  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=50.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH---HcCCCE-EEecCCC-cccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.++++++ .+..+   ..+... .+..+-. .+++.+.+++..+.. ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            3678999988 9999999998888999 5777777654 22222   334322 2222222 223333444333322 47


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        80 id~lv~~Ag~   89 (255)
T 2q2v_A           80 VDILVNNAGI   89 (255)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.88  E-value=0.012  Score=48.30  Aligned_cols=82  Identities=18%  Similarity=0.199  Sum_probs=51.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC----------------hhHHHHH----HHcCCC-EEEecCCCc-
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD----------------DYRLSVA----KEIGAD-NIVKVSTNL-  163 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~----------------~~~~~~~----~~lg~~-~~~~~~~~~-  163 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++                +++.+.+    +..+.. ..+..+-.+ 
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            5789999987 9999999998889999 57777665                4443322    223322 222222222 


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          164 QDIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +++.+.+++..+.. +++|++|++.|.
T Consensus        89 ~~v~~~~~~~~~~~-g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQL-GRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEECCcc
Confidence            23333444443333 479999999884

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.88  E-value=0.0053  Score=48.98  Aligned_cols=82  Identities=20%  Similarity=0.298  Sum_probs=53.7

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC--CCeEEEEeCChhHHHHHHHc-CCC-EEEecCCCc-ccHHHHHHHHHHHhC-CC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDDYRLSVAKEI-GAD-NIVKVSTNL-QDIAEEVEKIQKAMG-TG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l-g~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~  180 (290)
                      +.++||+|+ |.+|...++.+...|  . .|+.+++++++.+.++++ +.. ..+..+-.+ +++.+.++++.+..+ .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            578999987 999999999888889  7 688888888777666655 222 223222222 233333443333222 26


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.87  E-value=0.01  Score=47.83  Aligned_cols=82  Identities=16%  Similarity=0.158  Sum_probs=52.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-. .+++.+.+++..+.. +
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH-G   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4689999987 9999999998888999 688888887665432 2   22322 12222222 223333333333222 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        91 ~iD~lv~~Ag~  101 (260)
T 2zat_A           91 GVDILVSNAAV  101 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.87  E-value=0.0084  Score=48.73  Aligned_cols=82  Identities=23%  Similarity=0.306  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++ +++..+.+    +..+.. .++..+-.+ +++.+.++++.+.. 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD-  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            5789999987 9999999998888999 5777766 44443332    333422 233333222 23334444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|+++|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999885

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.87  E-value=0.0075  Score=48.81  Aligned_cols=82  Identities=27%  Similarity=0.333  Sum_probs=53.1

Q ss_pred             CCCeEEEECC-C-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---C--CCEEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-G-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---G--ADNIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g--~~~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ | ++|...++.+...|+ .|+.+++++++.+.+ +++   +  ....+..+-. .+++.+.++++.+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            5789999987 6 799999998888899 588888887765433 333   2  1122322222 223334444443333


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|++.|.
T Consensus       100 -g~id~li~~Ag~  111 (266)
T 3o38_A          100 -GRLDVLVNNAGL  111 (266)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCcEEEECCCc
Confidence             479999999984

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.87  E-value=0.011  Score=48.30  Aligned_cols=82  Identities=17%  Similarity=0.216  Sum_probs=51.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+.+ +.   .+.. ..+..+-. .+++.+.++++.+ ..+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT-EHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH-HCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH-hcC
Confidence            4678999988 9999999998888899 577787777665432 22   2432 22222222 2233333333332 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.87  E-value=0.0099  Score=48.59  Aligned_cols=82  Identities=22%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCC---C-EEEecCCC-cccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGA---D-NIVKVSTN-LQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~---~-~~~~~~~~-~~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+.   . ..+..+-. .++..+.+++..+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999987 9999999998888999 688888887765433 2   2332   1 12222222 22333344444332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        89 ~-g~id~lv~nAg~  101 (281)
T 3svt_A           89 H-GRLHGVVHCAGG  101 (281)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            3 469999999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.86  E-value=0.0087  Score=48.65  Aligned_cols=82  Identities=20%  Similarity=0.255  Sum_probs=50.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+.+ ++++.+.+    +..+.. ..+..+-.+ ++..+.++++.+.. 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999998888999 4666555 55444332    233432 222222222 23333444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.86  E-value=0.013  Score=47.84  Aligned_cols=82  Identities=20%  Similarity=0.271  Sum_probs=51.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHHH----HHHcCCC-EEEecCCC-cccHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLSV----AKEIGAD-NIVKVSTN-LQDIA  167 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~~----~~~lg~~-~~~~~~~~-~~~~~  167 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++            +++.+.    ++..+.. ..+..+-. .+++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999987 9999999998889999 57777765            443332    2233432 22222222 22333


Q ss_pred             HHHHHHHHHhCCCccEEEEccCC
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +.+++..+.. +++|++|++.|.
T Consensus        91 ~~~~~~~~~~-g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDEL-GRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHc-CCCCEEEECCCC
Confidence            4444443333 469999999985

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.86  E-value=0.0051  Score=50.04  Aligned_cols=79  Identities=25%  Similarity=0.384  Sum_probs=50.8

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ...++++||+|+ +++|.+.++.+...|+ .|+.+++++++..     +....+..+-. .++..+.++++.+.. +++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKY-GRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            457889999987 9999999998888999 5888877765431     12222222222 233444444443333 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.86  E-value=0.013  Score=47.94  Aligned_cols=83  Identities=20%  Similarity=0.194  Sum_probs=51.9

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-------------ChhHHHHH----HHcCCCE-EEecCCC-ccc
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-------------DDYRLSVA----KEIGADN-IVKVSTN-LQD  165 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-------------~~~~~~~~----~~lg~~~-~~~~~~~-~~~  165 (290)
                      -.++++||+|+ +++|.+.++.+...|+ .|+.+++             ++++.+.+    +..+... .+..+-. .++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            35789999987 9999999998889999 5777765             44444332    2334322 2222222 223


Q ss_pred             HHHHHHHHHHHhCCCccEEEEccCC
Q 022879          166 IAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      ..+.+++..+.. +++|+++++.|.
T Consensus        92 v~~~~~~~~~~~-g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQF-GRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCC
Confidence            334444443333 479999999884

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.84  E-value=0.022  Score=44.74  Aligned_cols=107  Identities=10%  Similarity=0.075  Sum_probs=61.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .+.+|||.|+|.+|...++++...|++ |++++.... ..+.+..-+.-..+......+            .-.++|+||
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~------------dL~~adLVI   96 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAKGQLRVKRKKVGEE------------DLLNVFFIV   96 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHTTSCEEECSCCCGG------------GSSSCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHcCCcEEEECCCCHh------------HhCCCCEEE
Confidence            578999999999999999999999995 666654432 222222223222222111111            124699999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhcc
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR  227 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  227 (290)
                      -+++.++. +..+...+..|..+..-.......+....+..+
T Consensus        97 aAT~d~~~-N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~r  137 (223)
T 3dfz_A           97 VATNDQAV-NKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSR  137 (223)
T ss_dssp             ECCCCTHH-HHHHHHHSCTTCEEEC-----CCSEECCEEEEE
T ss_pred             ECCCCHHH-HHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEe
Confidence            99998644 544444444888877654333334444444333

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.84  E-value=0.014  Score=48.21  Aligned_cols=82  Identities=20%  Similarity=0.231  Sum_probs=51.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCE-EEecCCCc-ccHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVSTNL-QDIA  167 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~-~~~~~~~~-~~~~  167 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++            +++.+    .++..+... .+..+-.+ ++..
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            5789999987 9999999998889999 57777665            33332    223344332 22222222 2333


Q ss_pred             HHHHHHHHHhCCCccEEEEccCC
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +.++++.+.. +++|++|++.|.
T Consensus       106 ~~~~~~~~~~-g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQL-GRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHh-CCCCEEEECCCC
Confidence            3444443333 479999999873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.84  E-value=0.0087  Score=48.30  Aligned_cols=82  Identities=22%  Similarity=0.363  Sum_probs=53.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+ ..++++.. ..+..+-.+ +++.+.++++.+.. .++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKF-GRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            4679999988 9999999999888999 5777777766544 34445532 222222222 23333444433322 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        89 ~li~~Ag~   96 (265)
T 2o23_A           89 VAVNCAGI   96 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.84  E-value=0.014  Score=48.17  Aligned_cols=81  Identities=17%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc--------CCC-EEEecCCCc-ccHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI--------GAD-NIVKVSTNL-QDIAEEVEKIQ  174 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l--------g~~-~~~~~~~~~-~~~~~~~~~~~  174 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +++        +.. ..+..+-.+ +++.+.++++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4679999988 9999999998888999 688888887665432 222        222 222222222 23333333333


Q ss_pred             HHhCCCccEEEEccC
Q 022879          175 KAMGTGIDVSFDCAG  189 (290)
Q Consensus       175 ~~~~~~~d~vid~~g  189 (290)
                      +.. +++|++|+++|
T Consensus        96 ~~~-g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTF-GKINFLVNNGG  109 (303)
T ss_dssp             HHH-SCCCEEEECCC
T ss_pred             HHc-CCCCEEEECCC
Confidence            323 36999999998

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.83  E-value=0.0082  Score=48.44  Aligned_cols=82  Identities=22%  Similarity=0.264  Sum_probs=51.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HHH-HHHc----CCC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSV-AKEI----GAD-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~-~~~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++ .+. .+++    +.. ..+..+-. .+++.+.+++..+..
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999987 9999999999888999 57888777665 332 2322    432 22222222 223333344433322


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|++.|.
T Consensus        82 -g~iD~lv~~Ag~   93 (260)
T 1x1t_A           82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             469999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.83  E-value=0.015  Score=47.60  Aligned_cols=82  Identities=21%  Similarity=0.301  Sum_probs=51.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHHHH----HHcCCC-EEEecCCC-cccHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLSVA----KEIGAD-NIVKVSTN-LQDIA  167 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~~~----~~lg~~-~~~~~~~~-~~~~~  167 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++            .++.+.+    +..+.. ..+..+-. .++..
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            5789999987 9999999999999999 57777765            4333322    233432 22222222 22333


Q ss_pred             HHHHHHHHHhCCCccEEEEccCC
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +.++++.+.. +++|+++++.|.
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg~  109 (287)
T 3pxx_A           88 RELANAVAEF-GKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHc-CCCCEEEECCCc
Confidence            3444443333 479999999885

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.82  E-value=0.015  Score=47.60  Aligned_cols=83  Identities=22%  Similarity=0.303  Sum_probs=52.5

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH----HHcCCC-EEEecCC-CcccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~  177 (290)
                      -.++++||+|+ +++|.+.++.+...|+ .|+.++. ++++.+.+    +..+.. ..+..+- ..+++.+.++++.+..
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999987 9999999999989999 5777764 55543322    233432 2222222 2334555555554333


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|+++|.
T Consensus       106 -g~iD~lvnnAg~  117 (280)
T 4da9_A          106 -GRIDCLVNNAGI  117 (280)
T ss_dssp             -SCCCEEEEECC-
T ss_pred             -CCCCEEEECCCc
Confidence             479999999985

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.82  E-value=0.012  Score=48.02  Aligned_cols=83  Identities=18%  Similarity=0.213  Sum_probs=52.5

Q ss_pred             CCCCeEEEECC-CH--HHHHHHHHHHHCCCCeEEEEeCCh--hHHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          106 GPETNVLIMGA-GP--IGLVTMLAARAFGAPRIVIVDVDD--YRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~--vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      -.++++||+|+ |.  +|.+.++.+...|+ .|+.++++.  +..+.+ +..+....+..+-.+ +++.+.++++.+ .-
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~  101 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK-VW  101 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH-HC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH-Hc
Confidence            35789999985 55  99999998888999 577877776  444444 334433344333322 233333444433 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|+++|.
T Consensus       102 g~id~li~nAg~  113 (280)
T 3nrc_A          102 DGLDAIVHSIAF  113 (280)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999874

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.81  E-value=0.0071  Score=48.71  Aligned_cols=101  Identities=15%  Similarity=0.189  Sum_probs=70.5

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC----EEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD----NIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++...++++.+||-.|+| .|..+..+++..+. .+++++.+++..+.+++....    .++..+....+          
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~----------  115 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE----------  115 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC----------
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC----------
Confidence            344567889999999987 47888888887777 799999999999988875422    12221111101          


Q ss_pred             HhCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEecc
Q 022879          176 AMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       176 ~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .....||+|+....-        ...+..+.+.|+|+|.++....
T Consensus       116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            124579999875321        2356778889999999998764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.81  E-value=0.0074  Score=51.07  Aligned_cols=82  Identities=30%  Similarity=0.330  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-----------HHHHHHcCCCE-EEecCCC-cccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-----------LSVAKEIGADN-IVKVSTN-LQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~-~~~~~~~-~~~~~~~~~~  172 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++           .+.++..+... .+..+-. .+++.+.+++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            5789999987 9999999998888899 57777777653           22334445322 2222222 2334444444


Q ss_pred             HHHHhCCCccEEEEccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~  190 (290)
                      +.+.. +++|++|++.|.
T Consensus       123 ~~~~~-g~iDilVnnAG~  139 (346)
T 3kvo_A          123 AIKKF-GGIDILVNNASA  139 (346)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            43333 479999999984

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.81  E-value=0.0079  Score=47.52  Aligned_cols=78  Identities=17%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      +++||+|+ |++|.+.++.+...|++ |+.+++++++.+.+ ++++.. ..+..+-.  + .+.++++.+.-...+|+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~-~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLSNNVGYRARDLA--S-HQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCSSCCCEEECCTT--C-HHHHHHHHHSCSSCCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhccCeEeecCC--C-HHHHHHHHHHHhhcCCEEE
Confidence            46899987 99999999999999995 88888888876655 445422 12222221  2 2234444333334569999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        78 ~~Ag~   82 (230)
T 3guy_A           78 HSAGS   82 (230)
T ss_dssp             ECCCC
T ss_pred             EeCCc
Confidence            99884

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.81  E-value=0.034  Score=39.79  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=52.0

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +.+|+|.|+|.+|...++.+...|. .+++++.++++.+.++. ++... +..+..  +. +.+.+   ..-.++|++|.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~--~~-~~l~~---~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDCT--KI-KTLED---AGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCTT--SH-HHHHH---TTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCCC--CH-HHHHH---cCcccCCEEEE
Confidence            3579999999999999999888898 68888898888776653 55432 221111  11 12221   12357999999


Q ss_pred             ccCCHH
Q 022879          187 CAGLNK  192 (290)
Q Consensus       187 ~~g~~~  192 (290)
                      +++...
T Consensus        76 ~~~~~~   81 (140)
T 1lss_A           76 VTGKEE   81 (140)
T ss_dssp             CCSCHH
T ss_pred             eeCCch
Confidence            999753

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.81  E-value=0.013  Score=48.84  Aligned_cols=100  Identities=13%  Similarity=0.223  Sum_probs=69.6

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      +...+.++.+||-.|+|. |..+..+++..|+ .+++++.+++..+.+++.    +....+.+..  .++.    ++   
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~----~~---  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----DF---  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----GC---
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CChH----HC---
Confidence            345678999999999876 8888889888788 799999999988877653    3211111101  1211    11   


Q ss_pred             hCCCccEEEEc-----cCC---HHHHHHHHHHhccCCEEEEecc
Q 022879          177 MGTGIDVSFDC-----AGL---NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       177 ~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       ...||+|+..     .+.   ...+..+.+.|+|+|+++....
T Consensus       153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence             2579999876     332   3467788899999999988654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.80  E-value=0.0067  Score=49.60  Aligned_cols=82  Identities=26%  Similarity=0.317  Sum_probs=52.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CC---C-EEEecCCCc-ccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GA---D-NIVKVSTNL-QDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~---~-~~~~~~~~~-~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.   . ..+..+-.+ +++.+.++++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 688888888765533 222   22   1 222222222 2333334443332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|++|++.|.
T Consensus        84 ~-g~iD~lv~nAg~   96 (280)
T 1xkq_A           84 F-GKIDVLVNNAGA   96 (280)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCC
Confidence            3 469999999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.79  E-value=0.015  Score=47.24  Aligned_cols=82  Identities=24%  Similarity=0.391  Sum_probs=52.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCC---CEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      .++++||+|+ |++|...++.+...|+ .|+.+++++++.+. .++++.   ...+..+-.+ +++.+.+++..+.. .+
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-GK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            5678999988 9999999998888999 68888888766443 344432   1222222222 23333333333222 46


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++|++.|.
T Consensus        93 id~li~~Ag~  102 (278)
T 2bgk_A           93 LDIMFGNVGV  102 (278)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.78  E-value=0.013  Score=47.18  Aligned_cols=81  Identities=19%  Similarity=0.264  Sum_probs=50.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH--HH-HHHHc---CCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--LS-VAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~--~~-~~~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+.+++++++  .+ ..+.+   +.. ..+..+-. .+++.+.+++..+.. 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            578999987 9999999998888899 57777777665  33 22332   322 22222222 223333444443323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.77  E-value=0.01  Score=48.60  Aligned_cols=82  Identities=22%  Similarity=0.254  Sum_probs=51.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-----------HHHHHHcCCC-EEEecCC-CcccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-----------LSVAKEIGAD-NIVKVST-NLQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~-~~~~~~~-~~~~~~~~~~~  172 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++           .+.++..+.. ..+..+- ..++..+.+++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4689999987 9999999998888899 67888777652           2223334432 2222222 22333444444


Q ss_pred             HHHHhCCCccEEEEccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~  190 (290)
                      +.+.. +++|++|++.|.
T Consensus        87 ~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHH-SCCSEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            43333 479999999884

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.76  E-value=0.014  Score=46.56  Aligned_cols=81  Identities=20%  Similarity=0.263  Sum_probs=51.6

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ +++    +.. ..+..+-. .+++.+.++++.+.. +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-G   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            568999987 9999999998888998 688888887765533 333    221 22222222 223333344433322 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        80 ~id~li~~Ag~   90 (250)
T 2cfc_A           80 AIDVLVNNAGI   90 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.76  E-value=0.0096  Score=46.84  Aligned_cols=101  Identities=15%  Similarity=0.097  Sum_probs=68.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCC-----CCeEEEEeCChhHHHHHHHc----C-----C--CEEEecCCCcccHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFG-----APRIVIVDVDDYRLSVAKEI----G-----A--DNIVKVSTNLQDIA  167 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g-----~~~vv~v~~~~~~~~~~~~l----g-----~--~~~~~~~~~~~~~~  167 (290)
                      .++++.+||-.|+|. |..+..+++..+     ...+++++.+++..+.+++.    +     .  ..++.-+. ...+.
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI-YQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG-GGCCH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh-Hhccc
Confidence            578899999999876 888889999876     12799999999888777542    2     1  12222111 11111


Q ss_pred             HHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      +..     .....||+|+........+..+.+.|+++|+++..-
T Consensus       155 ~~~-----~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          155 EEK-----KELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HHH-----HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             ccC-----ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            000     113579999987776556788889999999988764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.76  E-value=0.012  Score=47.55  Aligned_cols=82  Identities=23%  Similarity=0.294  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHH-HH---cCC-CEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVA-KE---IGA-DNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~-~~---lg~-~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      +++++||+|+ |.+|...++.+.. .|+ .|+.++++.++.+.+ +.   .+. ...+..+-.+ +++.+.++++.+.. 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            5678999988 9999999888777 899 688888887654432 22   232 2233322222 23333444443322 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|++|+++|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.75  E-value=0.0098  Score=49.11  Aligned_cols=82  Identities=21%  Similarity=0.296  Sum_probs=52.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCC---C-EEEecCCCc-ccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGA---D-NIVKVSTNL-QDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~---~-~~~~~~~~~-~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.   . ..+..+-.+ +++.+.+++..+.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 688888887765433 22   232   1 222222222 2333334443332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|++|++.|.
T Consensus       104 ~-g~iD~lvnnAG~  116 (297)
T 1xhl_A          104 F-GKIDILVNNAGA  116 (297)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            3 479999999873

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.75  E-value=0.009  Score=48.34  Aligned_cols=82  Identities=15%  Similarity=0.236  Sum_probs=49.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh---HHH-HHHH---cCCC-EEEecCCC-cccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY---RLS-VAKE---IGAD-NIVKVSTN-LQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+.++..   +.+ ..++   .+.. ..+..+-. .++..+.++++.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5689999987 9999999999888999 5777655433   222 2222   2322 12222222 22333334443332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        89 ~-g~iD~lvnnAg~  101 (262)
T 3ksu_A           89 F-GKVDIAINTVGK  101 (262)
T ss_dssp             H-CSEEEEEECCCC
T ss_pred             c-CCCCEEEECCCC
Confidence            2 479999999983

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.75  E-value=0.011  Score=47.81  Aligned_cols=84  Identities=15%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             CCCCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcc-cHHHHHHHHHHH
Q 022879          105 IGPETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQ-DIAEEVEKIQKA  176 (290)
Q Consensus       105 ~~~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~-~~~~~~~~~~~~  176 (290)
                      ..+++++||+|+   +++|.+.++.+...|+ .|+.++++++..+.+    +..+....+..+-.+. +..+.++++.+ 
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT-   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH-
Confidence            457889999974   6899999998888999 678887775544433    3344333343332222 33334444433 


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      ..+++|++|+++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (271)
T 3ek2_A           89 HWDSLDGLVHSIGF  102 (271)
T ss_dssp             HCSCEEEEEECCCC
T ss_pred             HcCCCCEEEECCcc
Confidence            23579999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.75  E-value=0.0083  Score=48.77  Aligned_cols=85  Identities=19%  Similarity=0.190  Sum_probs=51.4

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHh
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAM  177 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~  177 (290)
                      ...++++||+|+ |++|.+.++.+...|++.++...+++++.+.+    +..+.. ..+..+-. .+++.+.++++.+..
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            346789999987 99999999999999995334446666655433    223322 22222222 223333444443323


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|+++|.
T Consensus       103 -g~id~li~nAg~  114 (272)
T 4e3z_A          103 -GRLDGLVNNAGI  114 (272)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.74  E-value=0.015  Score=46.27  Aligned_cols=82  Identities=22%  Similarity=0.197  Sum_probs=51.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCC------eEEEEeCChhHHHHH-HHc---CCC-EEEecCCCc-ccHHHHHHHHH
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAP------RIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQ  174 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~------~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~~~~~~  174 (290)
                      ++++||+|+ |++|...++.+...|+.      .|+.+++++++.+.+ +++   +.. ..+..+-.+ +++.+.++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            568999987 99999999888878883      577888887765543 222   322 222222222 23333344433


Q ss_pred             HHhCCCccEEEEccCC
Q 022879          175 KAMGTGIDVSFDCAGL  190 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~  190 (290)
                      +. .+++|++|++.|.
T Consensus        82 ~~-~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ER-YGHIDCLVNNAGV   96 (244)
T ss_dssp             HH-TSCCSEEEECCCC
T ss_pred             Hh-CCCCCEEEEcCCc
Confidence            32 3479999999873

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.74  E-value=0.011  Score=47.43  Aligned_cols=103  Identities=22%  Similarity=0.237  Sum_probs=72.4

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc----CCCE-EEecCCCcccHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEK  172 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~  172 (290)
                      .+....++++++||-.|+|. |..+..+++.++ ...+++++.+++..+.+++.    +... +....   .++.+.   
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~---  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDIYEG---  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCGGGC---
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cchhhc---
Confidence            34557789999999999876 888889999853 34899999999888877553    4322 21111   121111   


Q ss_pred             HHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEec
Q 022879          173 IQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  211 (290)
                         .....+|+|+.....+ ..+..+.+.|+++|+++.+.
T Consensus       158 ---~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 ---IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             ---CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence               1235699999877654 37888999999999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.74  E-value=0.014  Score=48.02  Aligned_cols=82  Identities=20%  Similarity=0.246  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HHH----HHHcCCCE-EEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~----~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++ .+.    ++..+... .+..+-.+ +++.+.+++..+.. 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999999889999 57777666542 222    23344332 22222222 23333444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus       124 g~iD~lvnnAg~  135 (291)
T 3ijr_A          124 GSLNILVNNVAQ  135 (291)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999773

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.74  E-value=0.01  Score=47.80  Aligned_cols=82  Identities=21%  Similarity=0.284  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH-H---HcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~-~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+++ ++++.+.+ +   ..+.. ..+..+-.+ +++.+.++++.+.. 
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999998888899 5777777 66554322 2   23322 222222222 23333344433222 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.74  E-value=0.028  Score=47.82  Aligned_cols=93  Identities=18%  Similarity=0.202  Sum_probs=63.5

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      -+|+|.|+|.+|..+++++.. .. .+.+.+.+.++.+.++.......++  ..  + .+.+.++.    .+.|+|++|+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d--~~--d-~~~l~~~~----~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVD--AS--N-FDKLVEVM----KEFELVIGAL   85 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECC--TT--C-HHHHHHHH----TTCSEEEECC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEe--cC--C-HHHHHHHH----hCCCEEEEec
Confidence            379999999999998887754 34 5777889998888776654322222  22  2 12344432    4689999999


Q ss_pred             CCHHHHHHHHHHhccCCEEEEecc
Q 022879          189 GLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       189 g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +..-+...+-.++..+=.|+.+..
T Consensus        86 p~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           86 PGFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEECCC
T ss_pred             CCcccchHHHHHHhcCcceEeeec
Confidence            975444555567777888888764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.73  E-value=0.0082  Score=48.94  Aligned_cols=82  Identities=23%  Similarity=0.285  Sum_probs=52.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---C---CC-EEEecCCC-cccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---G---AD-NIVKVSTN-LQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g---~~-~~~~~~~~-~~~~~~~~~~~~~~  176 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++   .   .. ..+..+-. .+++.+.+++..+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4678999987 9999999998888899 688888887765533 333   2   11 22222222 22333334443332


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|++|++.|.
T Consensus        84 ~-g~id~lv~~Ag~   96 (278)
T 1spx_A           84 F-GKLDILVNNAGA   96 (278)
T ss_dssp             H-SCCCEEEECCC-
T ss_pred             c-CCCCEEEECCCC
Confidence            3 479999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.71  E-value=0.019  Score=46.82  Aligned_cols=82  Identities=23%  Similarity=0.255  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-------------ChhHHHHH----HHcCCCE-EEecCCC-cccH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-------------DDYRLSVA----KEIGADN-IVKVSTN-LQDI  166 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-------------~~~~~~~~----~~lg~~~-~~~~~~~-~~~~  166 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++             ++++.+..    +..+... .+..+-. .+++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999987 9999999999989999 5777766             34443322    2333322 2222222 2233


Q ss_pred             HHHHHHHHHHhCCCccEEEEccCC
Q 022879          167 AEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      .+.+++..+.. +++|+++++.|.
T Consensus        89 ~~~~~~~~~~~-g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAAL-GRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            33344433323 469999999875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.71  E-value=0.01  Score=47.60  Aligned_cols=77  Identities=21%  Similarity=0.228  Sum_probs=49.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.++++++.    +..+ ...+..+-.+ +++.+.+++..+ .-+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~-~~~~~~D~~d~~~~~~~~~~~~~-~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYP-FATEVMDVADAAQVAQVCQRLLA-ETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCS-SEEEECCTTCHHHHHHHHHHHHH-HCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCC-ceEEEcCCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            4678999988 9999999999999999 57777776542    1233 2223222222 233334444333 23479999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.71  E-value=0.011  Score=52.01  Aligned_cols=82  Identities=21%  Similarity=0.312  Sum_probs=53.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH---HHHHHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL---SVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~---~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +++++||+|+ |++|...++.+...|+ +++.+++++...   +..+.++.. .+..+- ..++..+.++++.+..+.++
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~-~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGT-ALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCE-EEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCe-EEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            5678999987 9999999998888899 577777654332   233445543 233332 23344444455544444459


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999885

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.70  E-value=0.011  Score=47.78  Aligned_cols=83  Identities=18%  Similarity=0.076  Sum_probs=50.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCC-CEEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK---EIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~-~~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ +++|...++.+...|++.++...+++++.+. .+   ..+. ..++..+-.+ +++.+.+++..+.. +
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH-G  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            4578999987 9999999999999999544545566554332 22   2332 2333333222 23333344333322 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|+++|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.69  E-value=0.016  Score=46.66  Aligned_cols=82  Identities=15%  Similarity=0.216  Sum_probs=50.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH-H---HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV-A---KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~-~---~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|++ |+.+ .+++++.+. .   +..+.. ..+..+-.+ ++..+.+++..+.. 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 99999999988889994 6655 555544332 2   333422 223222222 23333444443323 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        85 g~id~lv~nAg~   96 (259)
T 3edm_A           85 GEIHGLVHVAGG   96 (259)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.68  E-value=0.016  Score=46.74  Aligned_cols=82  Identities=21%  Similarity=0.203  Sum_probs=51.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.. ..+..+-. .+++.+.+++..+...+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 9999999998888999 688888887765433 222   322 22222222 22333333333222135


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|+++++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999994

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.68  E-value=0.01  Score=47.55  Aligned_cols=82  Identities=23%  Similarity=0.263  Sum_probs=50.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHH-HHH---cCCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSV-AKE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~-~~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.++++ +++.+. .++   .+.. ..+..+-. .+++.+.++++.+.. 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF-   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999998888999 57777776 554432 222   2322 22222222 223333444433322 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|+++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.68  E-value=0.019  Score=47.18  Aligned_cols=82  Identities=16%  Similarity=0.059  Sum_probs=52.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHH-H----HcCCC-EEEecCCC-cc-------------
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVA-K----EIGAD-NIVKVSTN-LQ-------------  164 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~-~----~lg~~-~~~~~~~~-~~-------------  164 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++ +++++.+.+ +    ..+.. ..+..+-. .+             
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            4678999987 9999999999988999 688888 887665433 2    23422 22222222 22             


Q ss_pred             ----cHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          165 ----DIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       165 ----~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                          ++.+.++++.+.. +++|++|++.|.
T Consensus        87 ~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~  115 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHW-GRCDVLVNNASS  115 (291)
T ss_dssp             CHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             chHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                3444444443333 469999999974

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.67  E-value=0.017  Score=46.98  Aligned_cols=82  Identities=23%  Similarity=0.297  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH--------HH---HHHHcCCC-EEEecCCC-cccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--------LS---VAKEIGAD-NIVKVSTN-LQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~--------~~---~~~~lg~~-~~~~~~~~-~~~~~~~~~~  172 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++        .+   .++..+.. ..+..+-. .++..+.+++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4689999987 9999999998888999 67888777542        11   22233422 12222222 2233334444


Q ss_pred             HHHHhCCCccEEEEccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~  190 (290)
                      +.+.. +++|+++++.|.
T Consensus        84 ~~~~~-g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTF-GGIDILVNNASA  100 (274)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCc
Confidence            43333 479999999984

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.67  E-value=0.01  Score=47.80  Aligned_cols=79  Identities=18%  Similarity=0.362  Sum_probs=48.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++..++  ..+.++.. ..+..+-.+ ++..+.++...+  .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            4678999987 9999999998888899 57777765433  34455533 222222222 233333333322  347999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999984

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.66  E-value=0.016  Score=48.24  Aligned_cols=82  Identities=21%  Similarity=0.253  Sum_probs=50.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCE-EEecCCC-cccHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVSTN-LQDIA  167 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~-~~~~~~~-~~~~~  167 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|++++.+            .++.+    .++..+... .+..+-. .+++.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999987 9999999999989999 57777654            33332    223344332 2222222 22344


Q ss_pred             HHHHHHHHHhCCCccEEEEccCC
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      +.+++..+.. +++|++|++.|.
T Consensus       124 ~~~~~~~~~~-g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEF-GHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHc-CCCCEEEECCCC
Confidence            4444443333 479999999884

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.66  E-value=0.017  Score=48.44  Aligned_cols=82  Identities=16%  Similarity=0.059  Sum_probs=52.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHH-H----HcCCC-EEEecCCC-cc-------------
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVA-K----EIGAD-NIVKVSTN-LQ-------------  164 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~-~----~lg~~-~~~~~~~~-~~-------------  164 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++ +++++.+.+ +    ..+.. ..+..+-. .+             
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            4678999987 9999999999999999 577887 777665433 2    22322 22222222 22             


Q ss_pred             ----cHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          165 ----DIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       165 ----~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                          ++.+.++++.+.. +++|++|+++|.
T Consensus       124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~  152 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHW-GRCDVLVNNASS  152 (328)
T ss_dssp             CHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             ccHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                3444444443333 469999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.65  E-value=0.0042  Score=48.91  Aligned_cols=64  Identities=13%  Similarity=0.148  Sum_probs=43.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++++             .|. ...++..+.+++    . +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~-~~~~~v~~~~~~----~-g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDI-SDEKSVYHYFET----I-GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCT-TCHHHHHHHHHH----H-CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCC-CCHHHHHHHHHH----h-CCCCEEE
Confidence            4678999987 9999999998888899 6777766544             122 112222222222    2 4699999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        65 ~nAg~   69 (223)
T 3uce_A           65 VTAGS   69 (223)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99884

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.65  E-value=0.0055  Score=51.18  Aligned_cols=104  Identities=23%  Similarity=0.275  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      .++...++++++||-.|+|. |..++.+++..+. ..|++++.+++..+.+++    .|...+....   .+..+..   
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~---~d~~~~~---  139 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC---GDGYYGV---  139 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCC---
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE---CChhhcc---
Confidence            34556788999999999876 7888888887542 369999999998887754    3432221111   1111100   


Q ss_pred             HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                        .....||+|+...........+.+.|+|+|+++..-
T Consensus       140 --~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          140 --PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             --GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             --ccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence              013579999987665434467788999999988763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.65  E-value=0.013  Score=47.46  Aligned_cols=76  Identities=18%  Similarity=0.281  Sum_probs=48.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++     . .....+..+-. .+++.+.++++.+.. +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----E-AKYDHIECDVTNPDQVKASIDHIFKEY-GSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----S-CSSEEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----C-CceEEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            4678999987 9999999999999999 57777776654     1 11122222222 223333444433323 469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.65  E-value=0.011  Score=46.98  Aligned_cols=105  Identities=21%  Similarity=0.272  Sum_probs=69.3

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHHHH--
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA--  176 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~--  176 (290)
                      ...++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.    |....+.+  ...+..+.+.++...  
T Consensus        57 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~--~~~d~~~~~~~~~~~~~  133 (239)
T 2hnk_A           57 KISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFL--KLGSALETLQVLIDSKS  133 (239)
T ss_dssp             HHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHHCSS
T ss_pred             HhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEE--EECCHHHHHHHHHhhcc
Confidence            345788999999874 888899999874 33799999999888777553    43221111  112333333322110  


Q ss_pred             --------h-C-CCccEEEEccCCH---HHHHHHHHHhccCCEEEEec
Q 022879          177 --------M-G-TGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 --------~-~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                              . + ..||+|+.....+   ..+..+.+.|+++|.++.-.
T Consensus       134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                    0 2 5799999876543   45678889999999998753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.64  E-value=0.0088  Score=48.14  Aligned_cols=76  Identities=20%  Similarity=0.217  Sum_probs=49.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.      ...+..+-. .+++.+.+++..+ .-+++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~-~~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEE-THGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHH-HTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            4678999988 9999999998888999 57777776654321      222322222 2233333444333 23579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.64  E-value=0.014  Score=46.44  Aligned_cols=82  Identities=21%  Similarity=0.308  Sum_probs=48.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH----HHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.+ .+++++.+.    ++..+.. ..+..+-.+ +++.+.+++..+.. 
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF-   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            4678999987 9999999998888999 57766 555444332    2223432 222222222 23333333333222 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            479999999875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.64  E-value=0.0083  Score=49.17  Aligned_cols=75  Identities=21%  Similarity=0.356  Sum_probs=51.1

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCC----CEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      -.++++||.|+|++|.+++..+...|++.+++++++.++.+. ++.++.    ..+...+  .+++.+.+        ..
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~--~~~l~~~l--------~~  194 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD--ARGIEDVI--------AA  194 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC--STTHHHHH--------HH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC--HHHHHHHH--------hc
Confidence            467899999999999999998889999778888899887663 344431    1121111  12333222        24


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+||+|++.
T Consensus       195 ~DiVInaTp~  204 (283)
T 3jyo_A          195 ADGVVNATPM  204 (283)
T ss_dssp             SSEEEECSST
T ss_pred             CCEEEECCCC
Confidence            8999999874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.64  E-value=0.018  Score=46.78  Aligned_cols=82  Identities=12%  Similarity=0.182  Sum_probs=50.6

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+   |++|.+.++.+...|+ .|+.++++++   ..+.+ +..+....+..+-.+ +++.+.+++..+ .-
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999975   6999999998888899 5777877764   22222 233422333333222 233333343332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        83 g~id~lv~nAg~   94 (275)
T 2pd4_A           83 GSLDFIVHSVAF   94 (275)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.64  E-value=0.0096  Score=49.52  Aligned_cols=93  Identities=24%  Similarity=0.239  Sum_probs=62.9

Q ss_pred             CeEEEECCCHHHHHHHHHHH--HCCCCeEEEEeCChhH--HHHHHHcCCCEEEecCCCcccHHHHHHHHHH-HhCCCccE
Q 022879          109 TNVLIMGAGPIGLVTMLAAR--AFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDV  183 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~--~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~  183 (290)
                      -+|.|.|+|.+|...+..+.  .-+.+.+.+++.++++  .++.+.+|.....      .+    ++++.. +.+.++|+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~----~e~ll~~~~~~~iDv   74 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AG----VEGLIKLPEFADIDF   74 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SH----HHHHHHSGGGGGEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CC----HHHHHhccCCCCCcE
Confidence            47899999999998888774  3466555566777665  5667788864211      12    222221 12357999


Q ss_pred             EEEccCCHHHHHHHHHHhcc--CCEEEEec
Q 022879          184 SFDCAGLNKTMSTALGATCA--GGKVCLVG  211 (290)
Q Consensus       184 vid~~g~~~~~~~~~~~l~~--~G~~v~~g  211 (290)
                      ||++++...+...+...+..  +..++...
T Consensus        75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~ek  104 (312)
T 1nvm_B           75 VFDATSASAHVQNEALLRQAKPGIRLIDLT  104 (312)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEECCChHHHHHHHHHHHHhCCCCEEEEcC
Confidence            99999976677778888887  77777643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.63  E-value=0.0083  Score=48.46  Aligned_cols=81  Identities=20%  Similarity=0.220  Sum_probs=49.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHHHHc----CCC-EEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKEI----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~l----g~~-~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+ .++++..+.+++.    +.. ..+..+-. .+++.+.++++.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF-   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            3578999987 9999999998888899 46666 4445544444332    211 22222222 223344444443323 


Q ss_pred             CCccEEEEccC
Q 022879          179 TGIDVSFDCAG  189 (290)
Q Consensus       179 ~~~d~vid~~g  189 (290)
                      +++|++|+++|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            47999999999

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.62  E-value=0.014  Score=46.37  Aligned_cols=81  Identities=17%  Similarity=0.198  Sum_probs=49.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEE-EeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVI-VDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~-v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      ++++||+|+ |.+|...++.+...|++ |+. ..+++++.+.+    +..+.. ..+..+-. .+++.+.+++..+ .-+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID-AWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH-HSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHH-HcC
Confidence            468999987 99999999999899994 666 46776655432    222322 12222222 2233333333332 234


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|++|++.|.
T Consensus        79 ~id~li~~Ag~   89 (244)
T 1edo_A           79 TIDVVVNNAGI   89 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.61  E-value=0.0073  Score=45.86  Aligned_cols=100  Identities=16%  Similarity=0.237  Sum_probs=65.1

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ..++++++||=.|+|. |..+..+++. +. .|++++.+++..+.+++    .+...+........++    ..   ...
T Consensus        18 ~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l----~~---~~~   87 (185)
T 3mti_A           18 EVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL----DH---YVR   87 (185)
T ss_dssp             TTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG----GG---TCC
T ss_pred             HhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH----Hh---hcc
Confidence            4678899999988876 7788888887 66 79999999988877754    3322221111111111    11   124


Q ss_pred             CCccEEEEccCC-----------H----HHHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGL-----------N----KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..||+|+-+.+.           .    ..+..+.+.|+|+|+++....
T Consensus        88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            569999766321           1    235678889999999988754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.59  E-value=0.015  Score=46.52  Aligned_cols=82  Identities=17%  Similarity=0.289  Sum_probs=50.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH----HHcCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |++|.+.++.+...|++ |+.++. ++++.+.+    +..+... .+..+-. .+++.+.+++..+.. 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 99999999988899995 555544 54443322    3334332 2222222 223334444443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.59  E-value=0.023  Score=46.52  Aligned_cols=82  Identities=20%  Similarity=0.238  Sum_probs=50.4

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+   |++|.+.++.+...|+ .|+.++++++   ..+.+ +..+....+..+-.+ +++.+.+++..+ .-
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE-NW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999975   5999999998888899 5777777764   22222 223422233323222 233333343332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.58  E-value=0.017  Score=48.32  Aligned_cols=81  Identities=21%  Similarity=0.271  Sum_probs=50.4

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-----hhHHHHH----HHcCCC-EEEecCC-CcccHHHHHHHHHH
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-----DYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQK  175 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-----~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~~~~~~~  175 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+++.++     +++.+.+    +..+.. ..+..+- ..+++.+.+++..+
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999987 9999999999999999 57766554     3333332    223322 2232222 22344444444433


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      .. +++|++++++|.
T Consensus        84 ~~-g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 ED-GRIDVLIHNAGH   97 (324)
T ss_dssp             HH-SCCSEEEECCCC
T ss_pred             Hc-CCCCEEEECCCc
Confidence            33 479999999983

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.58  E-value=0.018  Score=47.00  Aligned_cols=78  Identities=17%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCcc-cHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-.+. ++.+.++++ + ...++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCCC
Confidence            4678999988 9999999998888999 688888888776544 455533 2232222222 233333333 2 234789


Q ss_pred             EEEEc
Q 022879          183 VSFDC  187 (290)
Q Consensus       183 ~vid~  187 (290)
                      +++++
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99998

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.58  E-value=0.009  Score=47.27  Aligned_cols=102  Identities=22%  Similarity=0.260  Sum_probs=67.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ...++.+||-.|+| .|..++.+++..+...+++++.+++..+.+++    .+.. .+.....   +..+.+...  ...
T Consensus        51 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~--~~~  124 (233)
T 2gpy_A           51 KMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG---DALQLGEKL--ELY  124 (233)
T ss_dssp             HHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CGGGSHHHH--TTS
T ss_pred             hccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHhc--ccC
Confidence            34578899999987 58888899998743489999999998887755    2432 1211111   211111111  013


Q ss_pred             CCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..||+|+.....   ...+..+.+.|+++|.++...
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            579999876553   356778888999999998753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.57  E-value=0.0082  Score=48.14  Aligned_cols=78  Identities=22%  Similarity=0.304  Sum_probs=49.7

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCCCcccHHHHHHHHHHH---hCCCcc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQDIAEEVEKIQKA---MGTGID  182 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~d  182 (290)
                      +++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+-.++   +.++++.+.   .-+++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR---AAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH---HHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH---HHHHHHHHHHHHhCCCCC
Confidence            36889987 9999999998888999 688888888776543 445422 2222222222   223333221   124799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus        77 ~lvnnAg~   84 (248)
T 3asu_A           77 ILVNNAGL   84 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.56  E-value=0.021  Score=46.00  Aligned_cols=82  Identities=12%  Similarity=0.292  Sum_probs=50.5

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHH-HHcCCCEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+   |++|.+.++.+...|+ .|+.++++++   ..+.+ +..+....+..+-.+ +++.+.+++..+.. 
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999975   6999999988888899 5778877764   22222 223433333333222 23333334333322 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.56  E-value=0.015  Score=47.08  Aligned_cols=82  Identities=17%  Similarity=0.222  Sum_probs=49.9

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHH-HHcCCCEEEecCCCcc-cHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVA-KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~-~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+   |++|.+.++.+...|+ .|+.+++++   +..+.+ +..+....+..+-.+. ++.+.+++..+ .-
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            4678999975   6999999998888999 577777765   222222 2334333333332222 33333333322 22


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.56  E-value=0.011  Score=46.17  Aligned_cols=92  Identities=12%  Similarity=0.122  Sum_probs=60.3

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|||+|+ |.+|...++.+...|. .|+++++++++.+.+...+.. ++..+-.+.+.    +.+     .++|+||+++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~~D~~d~~~----~~~-----~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVA-TLVKEPLVLTE----ADL-----DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSE-EEECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCce-EEecccccccH----hhc-----ccCCEEEECC
Confidence            5899998 9999999999988898 688888988876654333333 23222222222    222     4699999999


Q ss_pred             CCH----------HHHHHHHHHhcc-CCEEEEecc
Q 022879          189 GLN----------KTMSTALGATCA-GGKVCLVGM  212 (290)
Q Consensus       189 g~~----------~~~~~~~~~l~~-~G~~v~~g~  212 (290)
                      |..          .....+++.++. +++++.++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            862          123345555543 478888853

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.56  E-value=0.011  Score=47.42  Aligned_cols=98  Identities=18%  Similarity=0.257  Sum_probs=62.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC-CCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      -++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+      .. .+..+ ...++..+.++++.+ ..+++|++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~------~~-~~~~d~~d~~~v~~~~~~~~~-~~g~iD~l   91 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNA------DH-SFTIKDSGEEEIKSVIEKINS-KSIKVDTF   91 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTS------SE-EEECSCSSHHHHHHHHHHHHT-TTCCEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc------cc-ceEEEeCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999987 9999999999888999 5888888766532      11 12222 222333334444432 33579999


Q ss_pred             EEccCCH-----------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          185 FDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       185 id~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      |+++|..           +               ..+.+...++++|+++.++..
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            9999830           1               122344555667899998753

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.55  E-value=0.018  Score=47.75  Aligned_cols=89  Identities=21%  Similarity=0.209  Sum_probs=65.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.++++++ +...++|....        ++.+.+        ...|+|+.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell--------~~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLETLL--------KESDVVTI  202 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHHHH--------hhCCEEEE
Confidence            57799999999999999999999999 68888888776 55667775321        222222        13799999


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++....    .+ ...+..++++..++.++..
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence            887532    12 3567889999999998764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.55  E-value=0.0048  Score=49.02  Aligned_cols=96  Identities=15%  Similarity=0.157  Sum_probs=59.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.+|||+|+ |.+|...++.+...| . .|+++++++++.+.+...+. .++..+-.  + .+.++++.    .++|++|
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~--d-~~~~~~~~----~~~D~vv   93 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNS-QIIMGDVL--N-HAALKQAM----QGQDIVY   93 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTE-EEEECCTT--C-HHHHHHHH----TTCSEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCc-EEEEecCC--C-HHHHHHHh----cCCCEEE
Confidence            358999997 999999999999889 6 68888888766432211121 22222211  2 12343332    3689999


Q ss_pred             EccCCHHH---HHHHHHHhccC--CEEEEecc
Q 022879          186 DCAGLNKT---MSTALGATCAG--GKVCLVGM  212 (290)
Q Consensus       186 d~~g~~~~---~~~~~~~l~~~--G~~v~~g~  212 (290)
                      ++.+....   .+.+++.++..  ++++.++.
T Consensus        94 ~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           94 ANLTGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             EECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            99886432   33455555443  68998875

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.54  E-value=0.014  Score=48.24  Aligned_cols=100  Identities=13%  Similarity=0.189  Sum_probs=70.3

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ++...++++.+||-.|+|. |..+..+++..|. .+++++.+++..+.+++.    +.. .+....   .++.    ++ 
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~----~~-  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGWE----EF-  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE---CCGG----GC-
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CCHH----Hc-
Confidence            3446788999999999876 8888999998887 799999999988877553    322 111111   1211    11 


Q ss_pred             HHhCCCccEEEEccCC---------------HHHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                         ...||+|+....-               ...+..+.+.|+|+|+++....
T Consensus       135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence               4679999874321               2567788899999999998764

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.54  E-value=0.011  Score=46.42  Aligned_cols=97  Identities=18%  Similarity=0.158  Sum_probs=66.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cC-----CC--EEEecCCCcccHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IG-----AD--NIVKVSTNLQDIAEEVE  171 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg-----~~--~~~~~~~~~~~~~~~~~  171 (290)
                      .++++.+||-.|+|. |..+..+++..|.. .+++++.+++..+.+++    .+     ..  .++..     +....  
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~~~~--  145 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-----DGRMG--  145 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-----CGGGC--
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC-----CcccC--
Confidence            378899999999876 78888888887642 79999999988877653    22     11  12221     11000  


Q ss_pred             HHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          172 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       .  .....||+|+........+..+.+.|+++|+++..-
T Consensus       146 -~--~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          146 -Y--AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             -C--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -c--ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence             0  123569999887665556678889999999998753

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.52  E-value=0.013  Score=51.62  Aligned_cols=92  Identities=17%  Similarity=0.197  Sum_probs=68.5

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.|.+|.|.|.|.+|..+++.++.+|+ .|++.++++.+.......|...        .+    +.++    -...|+|+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~----l~el----l~~aDiVi  337 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VT----MEYA----ADKADIFV  337 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEEE
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CC----HHHH----HhcCCEEE
Confidence            478999999999999999999999999 6999999887753334455421        12    2222    24589999


Q ss_pred             EccCCHHHH-HHHHHHhccCCEEEEeccCC
Q 022879          186 DCAGLNKTM-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       186 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      .+++....+ ...++.++++..++.++...
T Consensus       338 ~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          338 TATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             ECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            998654333 36778999999999998654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.52  E-value=0.019  Score=47.76  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=49.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC---hhHHHHH-HHc----CCC-EEEecCCCcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---DYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~---~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .++++||.|+|++|.+++..+...|++.|+++.++   .++.+.+ +++    +.. .++.++    ++ +.+.+..   
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~----~~-~~l~~~l---  224 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIE----DH-EQLRKEI---  224 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT----CH-HHHHHHH---
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccc----hH-HHHHhhh---
Confidence            67899999999999999999999999778888888   5554433 333    221 223322    11 1222211   


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       ..+|+||+|++.
T Consensus       225 -~~aDiIINaTp~  236 (315)
T 3tnl_A          225 -AESVIFTNATGV  236 (315)
T ss_dssp             -HTCSEEEECSST
T ss_pred             -cCCCEEEECccC
Confidence             258999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.50  E-value=0.014  Score=47.96  Aligned_cols=83  Identities=23%  Similarity=0.297  Sum_probs=50.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCC--eEEEEeCChhHHHHHH-Hc-----CCC-EEEecCC-CcccHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAP--RIVIVDVDDYRLSVAK-EI-----GAD-NIVKVST-NLQDIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~--~vv~v~~~~~~~~~~~-~l-----g~~-~~~~~~~-~~~~~~~~~~~~~~  175 (290)
                      .++++||+|+ +++|.+.++.+...|+.  .|+.+++++++.+.+. ++     +.. ..+..+- ..+++.+.++++.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4679999987 99999888766666652  5788888887765442 22     222 1222222 22334333333322


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                       .-+++|++|++.|.
T Consensus       112 -~~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 -EFKDIDILVNNAGK  125 (287)
T ss_dssp             -GGCSCCEEEECCCC
T ss_pred             -hcCCCCEEEECCCc
Confidence             22479999999883

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.50  E-value=0.025  Score=49.04  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=68.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      ...+|+|.|.|.+|+.+++.++..|. .|++++.++++.+.++..|...++ -+..+.+   .+++   .+-...|+++-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~-GDat~~~---~L~~---agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFY-GDATRMD---LLES---AGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEE-SCTTCHH---HHHH---TTTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEE-cCCCCHH---HHHh---cCCCccCEEEE
Confidence            45689999999999999999999999 599999999999999988865433 2222222   2332   24467999999


Q ss_pred             ccCCHHHHH---HHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMS---TALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~---~~~~~l~~~G~~v~~  210 (290)
                      +++.+..-.   ...+.+.+.-+++.-
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence            999754322   334445566666654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.50  E-value=0.02  Score=46.35  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---C-CCE--EEecCCCcccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---G-ADN--IVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g-~~~--~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.. +++   + ...  .+..+-.+   .+.++++.+. -
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~---~~~~~~~~~~-~   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT---EQGCQDVIEK-Y   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS---HHHHHHHHHH-C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC---HHHHHHHHHh-c
Confidence            4688999987 9999999998888999 688888887665432 222   1 112  12222222   2234444332 2


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        84 g~id~lv~nAg~   95 (267)
T 3t4x_A           84 PKVDILINNLGI   95 (267)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.49  E-value=0.021  Score=45.40  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=49.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH-H---HcCCC-EE-EecCCCc-ccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-K---EIGAD-NI-VKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~---~lg~~-~~-~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      ++++||+|+ |.+|...++.+...|+ .|+++ ++++++.+.+ +   ..+.. .. +..+-.+ +++.+.++++.+.. 
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-
Confidence            357999988 9999999998888999 56666 7777665433 2   22422 12 3222222 23333333333222 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++|++.|.
T Consensus        79 ~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 GGLDTLVNNAGI   90 (245)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999873

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.49  E-value=0.014  Score=45.73  Aligned_cols=95  Identities=16%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      .+|||+|+ |.+|...++.+...|. .|+++++++++.+.+.  ....++..+-  .+. +.+.+..    .++|+||++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~Dl--~d~-~~~~~~~----~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKADV--SSL-DEVCEVC----KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCCT--TCH-HHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEecC--CCH-HHHHHHh----cCCCEEEEe
Confidence            58999998 9999999999999998 6888888877643211  1112222221  122 2333332    369999999


Q ss_pred             cCCHH-----------HHHHHHHHhccC--CEEEEeccC
Q 022879          188 AGLNK-----------TMSTALGATCAG--GKVCLVGMG  213 (290)
Q Consensus       188 ~g~~~-----------~~~~~~~~l~~~--G~~v~~g~~  213 (290)
                      +|...           ....+++.++..  .+++.++..
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            98631           223355555443  488888753

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.49  E-value=0.0073  Score=47.62  Aligned_cols=97  Identities=20%  Similarity=0.192  Sum_probs=66.9

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC------CeEEEEeCChhHHHHHHHc----C-------CCEEEecCCCcccH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGA------PRIVIVDVDDYRLSVAKEI----G-------ADNIVKVSTNLQDI  166 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~------~~vv~v~~~~~~~~~~~~l----g-------~~~~~~~~~~~~~~  166 (290)
                      .++++.+||-.|+|. |..+..+++..+.      ..+++++.+++..+.+++.    +       ...++.-     +.
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG-----DG  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES-----CG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC-----Cc
Confidence            578899999999876 8888888887663      3799999999887776542    1       1122221     11


Q ss_pred             HHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          167 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...   +  .....||+|+...........+.+.|+++|+++..-
T Consensus       155 ~~~---~--~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          155 RKG---Y--PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             GGC---C--GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ccC---C--CcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            100   0  112579999987776556678889999999988753

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.48  E-value=0.031  Score=46.64  Aligned_cols=81  Identities=25%  Similarity=0.308  Sum_probs=51.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC---------ChhHHH-H---HHHcCCCEEEecCCCcccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV---------DDYRLS-V---AKEIGADNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~---------~~~~~~-~---~~~lg~~~~~~~~~~~~~~~~~~~~  172 (290)
                      .++++||+|+ |++|...++.+...|+ .|++++.         +.++.+ .   ++..+.....+.. ..++..+.+++
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~-~~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD-SVEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECC-CGGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCC-CHHHHHHHHHH
Confidence            4678999988 9999999998888999 5666532         344332 2   2333444444443 23344444554


Q ss_pred             HHHHhCCCccEEEEccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~  190 (290)
                      +.+. .+++|++|++.|.
T Consensus        86 ~~~~-~g~iD~lVnnAG~  102 (319)
T 1gz6_A           86 ALDT-FGRIDVVVNNAGI  102 (319)
T ss_dssp             HHHH-TSCCCEEEECCCC
T ss_pred             HHHH-cCCCCEEEECCCC
Confidence            4433 3479999999873

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.48  E-value=0.023  Score=45.76  Aligned_cols=82  Identities=17%  Similarity=0.257  Sum_probs=49.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHH----cCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKE----IGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~----lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .++++||+|+ |.+|...++.+...|+ .|+.++++.++ .+.+++    .+.. ..+..+-.+ +++.+.++++.. .-
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA-DL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH-hc
Confidence            4578999988 9999999998888899 57777774433 222222    2432 222222222 233333444332 23


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            569999999874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.48  E-value=0.0091  Score=49.33  Aligned_cols=94  Identities=15%  Similarity=0.119  Sum_probs=62.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC--EEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+.+++|.|+|++|.+++..+...|++.+++.+++.++.+ +++.++..  .+.       ++ +.+.+.    -..+|+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~-~~~~~~----~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SL-AEAETR----LAEYDI  207 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CH-HHHHHT----GGGCSE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eH-HHHHhh----hccCCE
Confidence            6789999999999999999999999877888889987754 55666642  122       11 122221    246999


Q ss_pred             EEEccCCHHHH-----HHHHHHhccCCEEEEecc
Q 022879          184 SFDCAGLNKTM-----STALGATCAGGKVCLVGM  212 (290)
Q Consensus       184 vid~~g~~~~~-----~~~~~~l~~~G~~v~~g~  212 (290)
                      ||+|++....-     ......++++..++.+..
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99999863210     001234556666777765

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.47  E-value=0.017  Score=45.67  Aligned_cols=103  Identities=15%  Similarity=0.143  Sum_probs=67.7

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--CEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      ...++++.+||-.|+|. |..+..+++..|...|++++.+++..+.+++...  ..+........+...    .. ....
T Consensus        69 ~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~-~~~~  142 (230)
T 1fbn_A           69 VMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE----YA-NIVE  142 (230)
T ss_dssp             CCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG----GT-TTSC
T ss_pred             ccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc----cc-ccCc
Confidence            34577899999999876 8888889998875589999999988877654321  111111111111000    00 0125


Q ss_pred             CccEEEEccCCH----HHHHHHHHHhccCCEEEEe
Q 022879          180 GIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       180 ~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  210 (290)
                      .+|+|+.....+    ..+..+.+.|+|+|.++..
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            699999766543    3477888899999999885

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.46  E-value=0.018  Score=46.30  Aligned_cols=81  Identities=17%  Similarity=0.110  Sum_probs=50.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC--CCeEEEEeCChhHHHHH-HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g--~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~  181 (290)
                      ++++||+|+ +++|.+.++.+...|  . .|+.+++++++.+.+ +.++.. ..+..+-. .++..+.+++..+.. +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH-GKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc-CCc
Confidence            578999987 999998887666554  5 677788888776644 344432 22222222 223334444443333 479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999999885

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.45  E-value=0.0075  Score=46.30  Aligned_cols=102  Identities=18%  Similarity=0.240  Sum_probs=67.6

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCC-CEEEecCCCcccHHHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ..++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++    .+. ..+.....+..++.       ..
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~   89 (197)
T 3eey_A           18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-------KY   89 (197)
T ss_dssp             HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-------GT
T ss_pred             hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-------hh
Confidence            3568889999998876 778888888864 2379999999988877754    232 11111111111111       11


Q ss_pred             hCCCccEEEEccCC---------------HHHHHHHHHHhccCCEEEEecc
Q 022879          177 MGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       177 ~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....||+|+-..+.               ...+..+.+.|+++|+++....
T Consensus        90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            23579999866532               2468889999999999987753

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.45  E-value=0.014  Score=51.34  Aligned_cols=94  Identities=20%  Similarity=0.218  Sum_probs=69.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .-.|.+|+|.|.|.+|..+++.++.+|+ .|++.+.+..+.......|.. +       .+    +.++    -...|+|
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~-------~~----l~el----l~~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V-------VT----LDEI----VDKGDFF  316 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E-------CC----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e-------cC----HHHH----HhcCCEE
Confidence            3478999999999999999999999999 699999988775444455542 1       12    2222    2458999


Q ss_pred             EEccCCHHHH-HHHHHHhccCCEEEEeccCCC
Q 022879          185 FDCAGLNKTM-STALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       185 id~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      +-+.+....+ ...++.|+++..++.++....
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgrg~~  348 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD  348 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence            9997654433 356778999999999986543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.44  E-value=0.025  Score=45.79  Aligned_cols=83  Identities=16%  Similarity=0.222  Sum_probs=49.8

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH-HH---HcCC-CEEEecCCCc-ccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV-AK---EIGA-DNIVKVSTNL-QDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~-~~---~lg~-~~~~~~~~~~-~~~~~~~~~~~~~~  177 (290)
                      ..++++||+|+ +++|.+.++.+...|+ .|+.++ ++.++.+. .+   ..+. ...+..+-.+ ++..+.++++.+..
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678999987 9999999998888999 566665 55444332 22   2232 2233222222 23333344443333


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++|+++|.
T Consensus       102 -g~id~li~nAg~  113 (269)
T 3gk3_A          102 -GKVDVLINNAGI  113 (269)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             469999999874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.44  E-value=0.022  Score=47.37  Aligned_cols=89  Identities=20%  Similarity=0.213  Sum_probs=65.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.++++++. ..+.+|...        .++.+.++        ..|+|+.
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~--------~~l~ell~--------~aDvVvl  202 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA--------VSLEELLK--------NSDVISL  202 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE--------CCHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee--------cCHHHHHh--------hCCEEEE
Confidence            67899999999999999999999999 688888887664 356677542        12222221        3799999


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++....    .+ ...+..+++++.++.++..
T Consensus       203 ~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          203 HVTVSKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             CCCCCTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             eccCChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            887532    12 4567889999999988764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.44  E-value=0.02  Score=48.35  Aligned_cols=77  Identities=21%  Similarity=0.338  Sum_probs=50.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHH-HcCC--CEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAK-EIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~-~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .+.+|||+|+ |.+|...++.+... |...|+++++++.+.+.+. .+..  -..+..+-.  +. +.+.+..    .++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~--d~-~~l~~~~----~~~   92 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR--DL-ERLNYAL----EGV   92 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTT--CH-HHHHHHT----TTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCC--CH-HHHHHHH----hcC
Confidence            5689999987 99999999888877 8756888888887765443 3321  122222211  21 2333332    369


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+||++++.
T Consensus        93 D~Vih~Aa~  101 (344)
T 2gn4_A           93 DICIHAAAL  101 (344)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.43  E-value=0.02  Score=46.39  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=50.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      .+.++||+|+ |.+|...++.+...|+ .|+++++ ++++.+.+    +..+.. ..+..+-.+ +++.+.++++.+.. 
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999998888999 5777766 66554322    233433 222222222 23333333333222 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|++|++.|.
T Consensus        98 ~~~d~vi~~Ag~  109 (274)
T 1ja9_A           98 GGLDFVMSNSGM  109 (274)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.43  E-value=0.0016  Score=52.02  Aligned_cols=99  Identities=14%  Similarity=0.103  Sum_probs=64.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC---EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ..+|.+||-.|.|. |..+..+++..+. .+++++.+++..+.+++....   .+...   ..++...+..   .....|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~---~~~a~~~~~~---~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL---KGLWEDVAPT---LPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE---ESCHHHHGGG---SCTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEE---eehHHhhccc---ccccCC
Confidence            47899999999875 7777888877665 789999999998888764311   11111   1222222111   134569


Q ss_pred             cEE-EEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          182 DVS-FDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       182 d~v-id~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |.| +|+...          ...+..+.+.|+|+|+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            988 454432          135667889999999998764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.42  E-value=0.0071  Score=48.41  Aligned_cols=78  Identities=18%  Similarity=0.242  Sum_probs=51.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++  +..+.+++.|... .+..+-.++.   .++++.  ...++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~--~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL---AAKDSF--TDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTSS--TTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHHH--HhCCCC
Confidence            5789999987 9999999999999999 577777663  4455666666443 2222222222   122221  235799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999986

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.41  E-value=0.023  Score=46.20  Aligned_cols=92  Identities=16%  Similarity=0.208  Sum_probs=60.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC--CEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+++++|.|+|++|.+++..+...|+..+.++.++.++.+ +++.++.  .....+    +++          ....+|+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~----~~l----------~~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRY----EAL----------EGQSFDI  184 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECS----GGG----------TTCCCSE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeH----HHh----------cccCCCE
Confidence            6789999999999999999888899877888889888755 4455553  122221    111          1156999


Q ss_pred             EEEccCCHHHH---HHHHHHhccCCEEEEecc
Q 022879          184 SFDCAGLNKTM---STALGATCAGGKVCLVGM  212 (290)
Q Consensus       184 vid~~g~~~~~---~~~~~~l~~~G~~v~~g~  212 (290)
                      ||+|++....-   ......++++..++.+-.
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence            99998752100   001234566666666654

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.41  E-value=0.047  Score=46.97  Aligned_cols=107  Identities=13%  Similarity=0.093  Sum_probs=67.9

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-----------cCC--CEEEecCCCccc
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----------IGA--DNIVKVSTNLQD  165 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----------lg~--~~~~~~~~~~~~  165 (290)
                      .+....++++++||=.|+|. |..++++++..|+..+++++-++...++++.           +|.  ..+--...+-.+
T Consensus       165 il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~  243 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  243 (438)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence            44557889999999998876 7788889988898779999999865555432           332  222211121112


Q ss_pred             HHHHHHHHHHHhCCCccEEEEccC--C---HHHHHHHHHHhccCCEEEEecc
Q 022879          166 IAEEVEKIQKAMGTGIDVSFDCAG--L---NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~d~vid~~g--~---~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..  ..+.    -..+|+||-..-  .   ...+...++.|+|+|+++..-.
T Consensus       244 lp--~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          244 EE--WRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             HH--HHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             Cc--cccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence            11  1110    025899985321  1   2345667788999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.41  E-value=0.0065  Score=49.15  Aligned_cols=78  Identities=21%  Similarity=0.102  Sum_probs=49.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.   .. ...+..+-. .+++.+.+++..+.. +++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~-~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PD-IHTVAGDISKPETADRIVREGIERF-GRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TT-EEEEESCTTSHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---Cc-eEEEEccCCCHHHHHHHHHHHHHHC-CCCCEE
Confidence            4679999987 9999999998888999 68888777554221   11 122222222 223333344443333 479999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      ++++|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.41  E-value=0.037  Score=45.17  Aligned_cols=98  Identities=15%  Similarity=0.166  Sum_probs=67.8

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      +...++++.+||-.|+|. |..+..+++..|. .+++++.+++..+.+++.    +.. .+....   .++.    ++  
T Consensus        58 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~----~~--  126 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL---AGWE----QF--  126 (287)
T ss_dssp             TTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE---SCGG----GC--
T ss_pred             HHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE---CChh----hC--
Confidence            345678999999999876 7788888877788 799999999988877653    321 111111   1211    11  


Q ss_pred             HhCCCccEEEEc-----cC---CHHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDC-----AG---LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~-----~g---~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                        ...||+|+..     .+   ....+..+.+.|+|+|.++...
T Consensus       127 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          127 --DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             --CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             --CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence              1579999865     22   1356788899999999998765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.39  E-value=0.011  Score=48.10  Aligned_cols=80  Identities=18%  Similarity=0.208  Sum_probs=49.7

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC---CEEEecCCCcc-cHHHHHHHHHHHhCCCcc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTNLQ-DIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d  182 (290)
                      +++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +++..   ...+..+-.+. ++.+.+++..+ .-+++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPE-EFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCG-GGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HhCCCC
Confidence            68999988 9999999998888999 688888888776543 33421   12222222222 22222222111 124689


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++|++.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.38  E-value=0.017  Score=48.18  Aligned_cols=82  Identities=28%  Similarity=0.402  Sum_probs=50.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC----------hhHH-HHH---HHcCCCEE-EecCCC-cccHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD----------DYRL-SVA---KEIGADNI-VKVSTN-LQDIAEE  169 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~----------~~~~-~~~---~~lg~~~~-~~~~~~-~~~~~~~  169 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++          .++. +..   +..+.... +..+-. .++..+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            5789999987 9999999998888899 67777665          3322 222   33343222 211211 2233333


Q ss_pred             HHHHHHHhCCCccEEEEccCC
Q 022879          170 VEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       170 ~~~~~~~~~~~~d~vid~~g~  190 (290)
                      ++++.+.. +++|++|+++|.
T Consensus       105 ~~~~~~~~-g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETF-GGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHH-SCCCEEECCCCC
T ss_pred             HHHHHHHc-CCCCEEEECCCC
Confidence            44443333 479999999984

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.36  E-value=0.026  Score=46.78  Aligned_cols=96  Identities=19%  Similarity=0.270  Sum_probs=66.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEecCCCcccHHHHHHHHHHHh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ++++.+||-.|+|. |..+..+++..|. .+++++.+++..+.+++    .+..   .++.-+.  .++.        ..
T Consensus       115 ~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~--------~~  182 (312)
T 3vc1_A          115 AGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM--LDTP--------FD  182 (312)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCC--------CC
T ss_pred             CCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh--hcCC--------CC
Confidence            78899999998865 7778888887787 79999999998877754    3322   2222111  1110        02


Q ss_pred             CCCccEEEEc-----cCCHHHHHHHHHHhccCCEEEEecc
Q 022879          178 GTGIDVSFDC-----AGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       178 ~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .+.||+|+..     .+....+..+.+.|+|+|+++....
T Consensus       183 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          183 KGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            3579999763     2334678889999999999998763

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.35  E-value=0.019  Score=46.59  Aligned_cols=83  Identities=18%  Similarity=0.368  Sum_probs=51.7

Q ss_pred             CCCeEEEEC---CCHHHHHHHHHHHHCCCCeEEEEeCChhH--HHHHHHcCCC-EEEecCCCc-ccHHHHHHHHHHHhC-
Q 022879          107 PETNVLIMG---AGPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG-  178 (290)
Q Consensus       107 ~~~~vlI~G---ag~vG~~ai~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~-  178 (290)
                      .++++||+|   ++++|.+.++.+...|+ .|+.+++++++  .+..++++.. ..+..+-.+ +++.+.+++..+..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            467899997   48999999998888999 57777777654  3333445422 222222222 233344444433333 


Q ss_pred             -CCccEEEEccCC
Q 022879          179 -TGIDVSFDCAGL  190 (290)
Q Consensus       179 -~~~d~vid~~g~  190 (290)
                       .++|++|++.|.
T Consensus        85 ~~~iD~lv~nAg~   97 (269)
T 2h7i_A           85 GNKLDGVVHSIGF   97 (269)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCceEEEECCcc
Confidence             279999999873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.35  E-value=0.081  Score=43.24  Aligned_cols=88  Identities=15%  Similarity=0.131  Sum_probs=59.8

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      .+|.|.|.|.+|...++.+...|. .|++.++++++.+.+.+.|....       .+..+.++        ..|+||-|+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~--------~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVVE--------SCPVTFAML   65 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH--------HCSEEEECC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh--------cCCEEEEEc
Confidence            478899999999999998888898 68889999998887777664321       12222221        258888888


Q ss_pred             CCHHHHHHHH-------HHhccCCEEEEecc
Q 022879          189 GLNKTMSTAL-------GATCAGGKVCLVGM  212 (290)
Q Consensus       189 g~~~~~~~~~-------~~l~~~G~~v~~g~  212 (290)
                      ..+......+       ..++++..++..+.
T Consensus        66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            7544444433       45566666666543

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.35  E-value=0.01  Score=47.62  Aligned_cols=103  Identities=19%  Similarity=0.224  Sum_probs=66.9

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ...++.+||-.|+|. |..++.+++.++ ...+++++.+++..+.+++    .|....+.+  ...+..+.+..+  ...
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~--~~~d~~~~l~~~--~~~  134 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTL--REGPALQSLESL--GEC  134 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEE--EESCHHHHHHTC--CSC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHhc--CCC
Confidence            345778999999875 888889998874 3489999999998887754    343311111  112332222221  112


Q ss_pred             CCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..||+|+-....   ...+..+.+.|+++|.++.-.
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            479999843332   246778889999999888754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.34  E-value=0.022  Score=49.18  Aligned_cols=87  Identities=23%  Similarity=0.214  Sum_probs=53.5

Q ss_pred             cCC-CCCCeEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCChhH----------------HHHHHHcCCCE-EEecCCC
Q 022879          103 ANI-GPETNVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYR----------------LSVAKEIGADN-IVKVSTN  162 (290)
Q Consensus       103 ~~~-~~~~~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~~~----------------~~~~~~lg~~~-~~~~~~~  162 (290)
                      ..+ +.++++||+|+ +++|.+.+..+.. .|+ .|+.++.+.+.                .+.++..|... .+..+-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            445 45778899987 9999988887777 899 57777655322                13445566432 2322322


Q ss_pred             -cccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          163 -LQDIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                       .++..+.+++..+..++++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence             2333334444433332579999999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.33  E-value=0.013  Score=47.62  Aligned_cols=81  Identities=23%  Similarity=0.233  Sum_probs=50.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      .++++||+|+ |.+|...+..+...|+ .|+.+++++++.+.+    +..+.. ..+..+-.+ +++.+.++++.+.. +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-G  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh-C
Confidence            4678999987 9999999988888899 577777776543322    223422 223222222 23333344433322 4


Q ss_pred             CccEEEEccC
Q 022879          180 GIDVSFDCAG  189 (290)
Q Consensus       180 ~~d~vid~~g  189 (290)
                      ++|++|++.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999987

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.32  E-value=0.0084  Score=47.78  Aligned_cols=78  Identities=26%  Similarity=0.375  Sum_probs=48.3

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhC-CCcc
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG-TGID  182 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~d  182 (290)
                      ..++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+     +....+..+-. .+++.+.++++.+..+ .++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45789999988 9999999999988999 5888877765432     11111211111 1223333333332222 4799


Q ss_pred             EEEEccC
Q 022879          183 VSFDCAG  189 (290)
Q Consensus       183 ~vid~~g  189 (290)
                      ++|++.|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999988

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.32  E-value=0.068  Score=43.90  Aligned_cols=87  Identities=15%  Similarity=0.114  Sum_probs=60.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      +|.|.|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .++.+.++        ..|+||.|+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~--------~~D~vi~~v~   70 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIAE--------QCDVIITMLP   70 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHHH--------HCSEEEECCS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh--------CCCEEEEECC
Confidence            78999999999999888888898 6888899998888777666421   1    12222221        3799999998


Q ss_pred             CHHHHHHHH-------HHhccCCEEEEecc
Q 022879          190 LNKTMSTAL-------GATCAGGKVCLVGM  212 (290)
Q Consensus       190 ~~~~~~~~~-------~~l~~~G~~v~~g~  212 (290)
                      .+..+...+       ..++++..++.++.
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             CHHHHHHHHhCcchHhhcCCCCCEEEECCC
Confidence            655455444       45666777776653

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.31  E-value=0.017  Score=46.38  Aligned_cols=84  Identities=19%  Similarity=0.204  Sum_probs=49.1

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe-CChhH-H---HHHHHcCCC-EEEecCCCc-ccHHHHHHHHHHH
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYR-L---SVAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKA  176 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~-~~~~~-~---~~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~  176 (290)
                      ..+++++||+|+ +++|.+.++.+...|++ |+.++ ++.++ .   +.++..+.. ..+..+-.+ ++..+.++++.+ 
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA-   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH-
Confidence            457789999987 99999999988888994 66554 33332 2   222334432 222222222 233344444433 


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      ..+++|++|+++|.
T Consensus        88 ~~g~id~lv~~Ag~  101 (256)
T 3ezl_A           88 EVGEIDVLVNNAGI  101 (256)
T ss_dssp             HTCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence            23479999999884

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.30  E-value=0.032  Score=43.68  Aligned_cols=105  Identities=19%  Similarity=0.211  Sum_probs=67.2

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ...++.+||-.|+|. |..++.+++.+. ...+++++.+++..+.+++    .+....+.+  ...+..+.+..+.....
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~--~~~d~~~~~~~~~~~~~  131 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEV--RTGLALDSLQQIENEKY  131 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEE--EESCHHHHHHHHHHTTC
T ss_pred             HhhCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhcCC
Confidence            345778999998875 778888888873 2379999999988777654    343211111  11233333333322122


Q ss_pred             CCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            569999854432   346778889999999888654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.30  E-value=0.027  Score=45.24  Aligned_cols=83  Identities=10%  Similarity=0.128  Sum_probs=49.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHH---CCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEecCCCc-ccHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARA---FGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVSTNL-QDIAEEVEKIQ  174 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~---~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~~~~-~~~~~~~~~~~  174 (290)
                      .++++||+|+ |++|.+.++.+..   .|+ .|+.+++++++.+.+ +++     +.. ..+..+-.+ +++.+.+++..
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            3578899987 9999998887776   799 688888887765533 232     322 222222222 22333333332


Q ss_pred             HH-hCCCcc--EEEEccCC
Q 022879          175 KA-MGTGID--VSFDCAGL  190 (290)
Q Consensus       175 ~~-~~~~~d--~vid~~g~  190 (290)
                      +. ..+++|  +++++.|.
T Consensus        84 ~~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCC
T ss_pred             hccccccCCccEEEECCcc
Confidence            10 123578  99998873

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.29  E-value=0.017  Score=46.35  Aligned_cols=91  Identities=24%  Similarity=0.312  Sum_probs=56.4

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccH--HHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~vi  185 (290)
                      +++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.      .  +     ..|+  .+.++++.+...+++|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~--~-----~~Dl~~~~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D--L-----STAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C--T-----TSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c--c-----ccCCCCHHHHHHHHHHhCCCCCEEE
Confidence            47899988 9999999998888999 57777777654211      0  1     0121  1233333321124689999


Q ss_pred             EccCCHH------------------HHHHHHHHhccC--CEEEEeccC
Q 022879          186 DCAGLNK------------------TMSTALGATCAG--GKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~------------------~~~~~~~~l~~~--G~~v~~g~~  213 (290)
                      ++.|...                  ..+.++..+...  |+++.++..
T Consensus        68 ~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           68 LCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             ECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             ECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            9988532                  123344444433  899998753

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.28  E-value=0.0069  Score=48.08  Aligned_cols=76  Identities=17%  Similarity=0.306  Sum_probs=47.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhC-CCccEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG-TGIDVS  184 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~d~v  184 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+     +....+..+-.+ +++.+.+++..+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999988 9999999999999999 6888877765532     111122111111 122223333322222 479999


Q ss_pred             EEccC
Q 022879          185 FDCAG  189 (290)
Q Consensus       185 id~~g  189 (290)
                      |++.|
T Consensus        77 v~~Ag   81 (236)
T 1ooe_A           77 FCVAG   81 (236)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99998

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.26  E-value=0.041  Score=45.12  Aligned_cols=36  Identities=28%  Similarity=0.424  Sum_probs=31.6

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ...+|+|.|+|++|..+++.+.+.|...+..++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457999999999999999999999999888887654

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.25  E-value=0.021  Score=48.33  Aligned_cols=89  Identities=19%  Similarity=0.142  Sum_probs=63.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++. +.+.....|...+       .++.+.++        ..|+|+-
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell~--------~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALFE--------QSDVLSV  221 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHHh--------hCCEEEE
Confidence            47799999999999999999999999 688887765 3455556675321       13332222        3689988


Q ss_pred             ccCCHHH-----HHHHHHHhccCCEEEEecc
Q 022879          187 CAGLNKT-----MSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~  212 (290)
                      ++.....     -...+..|+++..++.++.
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            8764221     1356778899999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.25  E-value=0.017  Score=46.79  Aligned_cols=76  Identities=22%  Similarity=0.257  Sum_probs=47.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.      ...+..+-.+ ++..+.++++.+.. +++|++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~------~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD~l   98 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAA------DLHLPGDLREAAYADGLPGAVAAGL-GRLDIV   98 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCC------SEECCCCTTSHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHh------hhccCcCCCCHHHHHHHHHHHHHhc-CCCCEE
Confidence            5789999987 9999999998888999 68887776554321      1111111111 22222333333222 469999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      ++++|.
T Consensus        99 vnnAg~  104 (266)
T 3uxy_A           99 VNNAGV  104 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.24  E-value=0.044  Score=48.85  Aligned_cols=81  Identities=22%  Similarity=0.305  Sum_probs=51.8

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH----HHH---HHHcCCCE-EEecCCCcccHHHHHHHHHH
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR----LSV---AKEIGADN-IVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~----~~~---~~~lg~~~-~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++++.++||+|+ |++|...++.+...|++.++.++++...    .+.   ++..|... ++..+-.  + .+.++++.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt--d-~~~v~~~~~  332 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVA--E-RDALAALVT  332 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSS--C-HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCC--C-HHHHHHHHh
Confidence            467889999987 9999999998888899767777776531    222   33345332 2222221  2 223444433


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      .  .++|+||++.|.
T Consensus       333 ~--~~ld~VVh~AGv  345 (511)
T 2z5l_A          333 A--YPPNAVFHTAGI  345 (511)
T ss_dssp             H--SCCSEEEECCCC
T ss_pred             c--CCCcEEEECCcc
Confidence            2  579999999884

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.24  E-value=0.0071  Score=48.33  Aligned_cols=76  Identities=18%  Similarity=0.076  Sum_probs=50.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-e--CChhHHHHH-HHc-CCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-D--VDDYRLSVA-KEI-GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~--~~~~~~~~~-~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ++++||+|+ |++|.+.++.+...|+ .|+.+ +  +++++.+.+ +++ +. .+.    ..++..+.++++.+ .-+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~-~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IAL----AEQKPERLVDATLQ-HGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EEC----CCCCGGGHHHHHGG-GSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-ccc----CHHHHHHHHHHHHH-HcCCC
Confidence            468899987 9999999999988999 67887 5  777765543 444 32 222    22333334444432 23479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        74 D~lv~~Ag~   82 (244)
T 1zmo_A           74 DTIVSNDYI   82 (244)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.24  E-value=0.033  Score=44.53  Aligned_cols=99  Identities=19%  Similarity=0.234  Sum_probs=68.3

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEecCCCcccHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~~~~  172 (290)
                      +....++++.+||-.|+|. |..+..+++..|. .+++++.+++..+.+++    .+..   .+..-+.  .++      
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~--~~~------   98 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA--AGY------   98 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC--TTC------
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh--HhC------
Confidence            3446788999999999876 7788899998887 69999999988777654    3321   2222111  111      


Q ss_pred             HHHHhCCCccEEEEcc------CCHHHHHHHHHHhccCCEEEEec
Q 022879          173 IQKAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                         .....||+|+..-      .....+..+.+.|+|+|+++...
T Consensus        99 ---~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A           99 ---VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             ---CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ---CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence               0135699998621      22456788888999999998764

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.20  E-value=0.024  Score=44.03  Aligned_cols=99  Identities=21%  Similarity=0.184  Sum_probs=68.4

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ....++.+||-.|+|. |..+..+++. |. .+++++.+++..+.++..+...+......-.++         .....||
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---------CCCCcee
Confidence            3477888999998866 7777777777 77 799999999999988876522221111111111         1346799


Q ss_pred             EEEEccCC--------HHHHHHHHHHhccCCEEEEeccC
Q 022879          183 VSFDCAGL--------NKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       183 ~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|+....-        ...+..+.+.|+++|.++.....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            99875422        34677888999999999887643

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.20  E-value=0.017  Score=47.08  Aligned_cols=98  Identities=15%  Similarity=0.112  Sum_probs=65.7

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-c-----C--CCEEEecCCCcccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-I-----G--ADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l-----g--~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+.+||+.|+|. |..+..+++..+...+++++-+++-.+.+++ +     +  ...+-..   ..|..+.+.    ..
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~---~~D~~~~l~----~~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ---VDDGFMHIA----KS  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE---ESCSHHHHH----TC
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE---ECcHHHHHh----hC
Confidence            4568999998765 6677778877676689999999998888765 2     1  1111111   122222222    12


Q ss_pred             CCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+-....          .+.+..+.+.|+++|.++.-.
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4679999865432          357889999999999998764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.20  E-value=0.038  Score=46.38  Aligned_cols=88  Identities=17%  Similarity=0.212  Sum_probs=63.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+|.|.|.|.+|...++.++..|. .|++.++++++ +..+.+|...        .++.+.++        ..|+|+.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l~--------~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLLR--------ESDFVVL  210 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHHh--------hCCEEEE
Confidence            46789999999999999999999999 68888888776 5555666421        12322221        3689999


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEecc
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  212 (290)
                      ++....    .+ ...+..++++..++..+.
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            887643    12 345677888888888764

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.20  E-value=0.037  Score=46.98  Aligned_cols=131  Identities=15%  Similarity=0.128  Sum_probs=81.1

Q ss_pred             CeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      -+|.|.|.|.+|...+..++.. +++.+.+.+.++++.+.++.+|...   +    .++.+.+      ....+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~ll------~~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEAVL------ADEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHHHH------HCTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHHHh------cCCCCCEEEEc
Confidence            4788999999998877777765 6644445578888887777777531   2    2333332      23579999999


Q ss_pred             cCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEE-EEe-eecCCcHHHHHHHHHcCCC
Q 022879          188 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDV-VGV-FRYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       188 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i-~~~-~~~~~~l~~~~~~~~~g~~  253 (290)
                      +....+...+..++.. |+-|.+.-+.....-....   + -.+++.+ .+. ..+...++.+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~a-GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEA-GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHC-CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCC
Confidence            9987777778778875 4555554221111111111   1 1223322 222 2236678889999999887

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.20  E-value=0.039  Score=43.78  Aligned_cols=74  Identities=18%  Similarity=0.080  Sum_probs=48.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+.+|||+|+ |.+|...++.+...  |. .|+++++++++.+.+ .-+.. .+..+-.  + .+.+.++.    .++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~~~D~~--d-~~~~~~~~----~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEAD-VFIGDIT--D-ADSINPAF----QGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTT-EEECCTT--S-HHHHHHHH----TTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCee-EEEecCC--C-HHHHHHHH----cCCCE
Confidence            4678999987 99999999988888  77 688888887665432 11222 2222211  2 12344332    35899


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +|+++|.
T Consensus        73 vi~~a~~   79 (253)
T 1xq6_A           73 LVILTSA   79 (253)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9999873

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.18  E-value=0.013  Score=49.50  Aligned_cols=92  Identities=21%  Similarity=0.270  Sum_probs=67.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.++++.+.+..+.+|...+       .++    .++.    ...|+|+-
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l----~ell----~~aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDL----NEML----PKCDVIVI  226 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCH----HHHG----GGCSEEEE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999 58888887766666777775421       122    2221    34799998


Q ss_pred             ccCCHH----H-HHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK----T-MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~----~-~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++...+    . -...+..|+++..++.++...
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~  259 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNARGA  259 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECcCch
Confidence            877421    1 145678899999999887543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.18  E-value=0.027  Score=45.64  Aligned_cols=88  Identities=16%  Similarity=0.221  Sum_probs=61.0

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +++++|.|+|++|.+++..+...| ..+.++.++.++.+.+.+++.. ...++    ++            ..+|+||+|
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~----~l------------~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEP----PK------------SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSC----CS------------SCCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHH----Hh------------ccCCEEEEc
Confidence            889999999999999999999999 4788888888876644477743 22221    11            168999999


Q ss_pred             cCCHH----HH--HHHHHHhccCCEEEEeccC
Q 022879          188 AGLNK----TM--STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       188 ~g~~~----~~--~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++...    .+  ..+...++++..++++...
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~  211 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAYG  211 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESCCS
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeCCC
Confidence            86420    11  1222367778888887653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.18  E-value=0.048  Score=45.25  Aligned_cols=40  Identities=15%  Similarity=0.142  Sum_probs=34.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC---hhHHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---DYRLS  146 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~---~~~~~  146 (290)
                      .++++||.|+|++|.+++..+...|++.+.++.++   .++.+
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~  189 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAV  189 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHH
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHH
Confidence            57899999999999999999999999778888888   55544

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.16  E-value=0.11  Score=43.38  Aligned_cols=130  Identities=18%  Similarity=0.111  Sum_probs=75.5

Q ss_pred             eEEEECCCHHHHHH-H-HHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGAGPIGLVT-M-LAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Gag~vG~~a-i-~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +|.|.|+|.+|... + .+.+ .+.+.+.+.+.++++.+ +.+.+|....+      .++.+.+      ....+|+|+.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~~------~~~~~~l------~~~~~D~V~i   68 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSV------TSVEELV------GDPDVDAVYV   68 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCCB------SCHHHHH------TCTTCCEEEE
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCccc------CCHHHHh------cCCCCCEEEE
Confidence            68899999999876 5 4445 77754445677777665 45667753221      2333222      2246999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEEEEee--ecCCcHHHHHHHHHcCCC
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDVVGVF--RYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i~~~~--~~~~~l~~~~~~~~~g~~  253 (290)
                      ++....+...+..++.. |+-+.+.-+.....-....   + -.+++.+.-..  .+...++.+.+++++|.+
T Consensus        69 ~tp~~~h~~~~~~al~~-Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           69 STTNELHREQTLAAIRA-GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CSCGGGHHHHHHHHHHT-TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChhHhHHHHHHHHHC-CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence            99976677777777775 5555553211111111111   1 12333332222  225668888999998877

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.16  E-value=0.024  Score=44.21  Aligned_cols=94  Identities=15%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|||+|+ |.+|...++.+...|. .|+++++++++.+..   ..-.++..+-.  +..+.+++.    -.++|+||+++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~~~~~D~~--d~~~~~~~~----~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---NNVKAVHFDVD--WTPEEMAKQ----LHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---TTEEEEECCTT--SCHHHHHTT----TTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---CCceEEEeccc--CCHHHHHHH----HcCCCEEEECC
Confidence            6899997 9999999999999998 688888887764322   22223332221  212233332    24699999999


Q ss_pred             CCHH---------HHHHHHHHhccC--CEEEEeccC
Q 022879          189 GLNK---------TMSTALGATCAG--GKVCLVGMG  213 (290)
Q Consensus       189 g~~~---------~~~~~~~~l~~~--G~~v~~g~~  213 (290)
                      |...         ....+++.++..  ++++.++..
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence            8531         233444544433  588888754

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.15  E-value=0.055  Score=45.42  Aligned_cols=101  Identities=22%  Similarity=0.253  Sum_probs=66.3

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEecCCCcccHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      .....+.+||..|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+-..   ..|..+.+..  
T Consensus       116 ~~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~---~~D~~~~l~~--  189 (334)
T 1xj5_A          116 CSIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV---IGDGVAFLKN--  189 (334)
T ss_dssp             TTSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE---ESCHHHHHHT--
T ss_pred             hhCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---ECCHHHHHHh--
Confidence            3456678999998765 667778888765558999999999888776521        1111111   1233332221  


Q ss_pred             HHhCCCccEEEEccC----------CHHHHHHHHHHhccCCEEEEe
Q 022879          175 KAMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       175 ~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~  210 (290)
                       .....||+|+-...          ....+..+.+.|+++|.++.-
T Consensus       190 -~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          190 -AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             -SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence             12357999986332          235778899999999999885

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.14  E-value=0.072  Score=41.07  Aligned_cols=97  Identities=12%  Similarity=-0.011  Sum_probs=61.7

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-----------------CEEEecCCC
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA-----------------DNIVKVSTN  162 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~-----------------~~~~~~~~~  162 (290)
                      ....+.++.+||..|+|. |..+..+++. |+ .|++++.+++..+.+++. ..                 -..+.-+-.
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            334567889999998865 6777778876 88 799999999998887653 11                 112211111


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEccCC----H----HHHHHHHHHhccCCEEEE
Q 022879          163 LQDIAEEVEKIQKAMGTGIDVSFDCAGL----N----KTMSTALGATCAGGKVCL  209 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~d~vid~~g~----~----~~~~~~~~~l~~~G~~v~  209 (290)
                      .-++.         ..+.||+|++...-    .    ..+..+.+.|+|+|+++.
T Consensus        93 ~l~~~---------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l  138 (203)
T 1pjz_A           93 ALTAR---------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL  138 (203)
T ss_dssp             SSTHH---------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred             cCCcc---------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            11110         01369999973211    1    246678899999999433

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.12  E-value=0.087  Score=43.65  Aligned_cols=89  Identities=13%  Similarity=0.112  Sum_probs=60.5

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      -.+|.|.|.|.+|...++.+...|. .|++.++++++.+.+.+.|....       .+..+.++        ..|+||-|
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~~--------~aDvvi~~   84 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVIK--------KCKYTIAM   84 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH--------HCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHHH--------hCCEEEEE
Confidence            3589999999999999998888898 68899999999888877775321       12222221        26888888


Q ss_pred             cCCHHHHHHHH-------HHhccCCEEEEecc
Q 022879          188 AGLNKTMSTAL-------GATCAGGKVCLVGM  212 (290)
Q Consensus       188 ~g~~~~~~~~~-------~~l~~~G~~v~~g~  212 (290)
                      +..+..+...+       ..++++..++..+.
T Consensus        85 vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           85 LSDPCAALSVVFDKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             CSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred             cCCHHHHHHHHhCchhhhhccCCCCEEEECCC
Confidence            87654444443       23445556665553

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.12  E-value=0.19  Score=36.71  Aligned_cols=95  Identities=12%  Similarity=0.177  Sum_probs=57.8

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHHHH-c--CCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVAKE-I--GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~~~-l--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..+++|.|+|.+|...++.+...|. .|++++.+ +++.+.++. +  +. .++.-+..  + .+.+++   .+-.+.|.
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~--~-~~~l~~---a~i~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSN--D-SSVLKK---AGIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTC-EEEESCTT--S-HHHHHH---HTTTTCSE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCC-eEEEcCCC--C-HHHHHH---cChhhCCE
Confidence            4689999999999999999999998 58888886 465544432 2  33 33332221  2 122332   23457999


Q ss_pred             EEEccCCHHHHH---HHHHHhccCCEEEEe
Q 022879          184 SFDCAGLNKTMS---TALGATCAGGKVCLV  210 (290)
Q Consensus       184 vid~~g~~~~~~---~~~~~l~~~G~~v~~  210 (290)
                      ++-+++....-.   ...+.+.+..+++..
T Consensus        75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999999743222   223334344555543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.12  E-value=0.022  Score=46.58  Aligned_cols=69  Identities=13%  Similarity=0.159  Sum_probs=49.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .+++++|.|+|++|.+++..+...|+..+.++.++.++.+ +++.++.   .....++    +       +    ...+|
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~----~-------l----~~~aD  189 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE----Q-------L----KQSYD  189 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----G-------C----CSCEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH----H-------h----cCCCC
Confidence            6789999999999999999888899867888889887755 4455542   1222211    1       1    14699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +||+|++.
T Consensus       190 iIInaTp~  197 (281)
T 3o8q_A          190 VIINSTSA  197 (281)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCcC
Confidence            99999975

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.11  E-value=0.04  Score=44.79  Aligned_cols=96  Identities=10%  Similarity=0.105  Sum_probs=63.1

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      +.......+.+++|.|+|++|.+++..+...|++.+.++.++.++.+ +++.++.. . .  .   +.          ..
T Consensus       111 l~~~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~--~---~~----------~~  173 (271)
T 1npy_A          111 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-I--N---SL----------EN  173 (271)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-E--S---CC----------TT
T ss_pred             HHHhCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-c--h---hh----------hc
Confidence            33334446789999999999999998888999877888889877744 55666641 1 1  1   00          01


Q ss_pred             CCccEEEEccCCHHH-------HHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLNKT-------MSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~~~-------~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..+|+||+|++....       .......+.++..++.+-.
T Consensus       174 ~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          174 QQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             CCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             ccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            358999999985311       0011345666777777754

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.11  E-value=0.045  Score=41.34  Aligned_cols=101  Identities=20%  Similarity=0.226  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCC-CEEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      +....+.++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++    .+. ..+...   ..++.+.+.   
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~---   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALC---   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHT---
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhcc---
Confidence            3445678999999999876 77888888766 4 79999999988887755    333 111111   123322111   


Q ss_pred             HHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                        ....+|+|+.....   ...+..+.+.|+++|.++...
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              11479999976441   356777888899999998764

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.10  E-value=0.051  Score=46.12  Aligned_cols=90  Identities=21%  Similarity=0.269  Sum_probs=64.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|++|.|.|.|.+|...++.++.+|+ .|++.+++. +.+.....|...        .++.    ++.    ...|+|+-
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l~----ell----~~aDvV~l  236 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASLE----DVL----TKSDFIFV  236 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCHH----HHH----HSCSEEEE
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCHH----HHH----hcCCEEEE
Confidence            37899999999999999999999999 688887774 344455666531        1222    222    24799998


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++....    .+ ...+..++++..++.++...
T Consensus       237 ~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~  269 (365)
T 4hy3_A          237 VAAVTSENKRFLGAEAFSSMRRGAAFILLSRAD  269 (365)
T ss_dssp             CSCSSCC---CCCHHHHHTSCTTCEEEECSCGG
T ss_pred             cCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCc
Confidence            776421    11 35778899999999998654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.10  E-value=0.019  Score=46.75  Aligned_cols=95  Identities=15%  Similarity=0.225  Sum_probs=58.3

Q ss_pred             eEEEECC-CHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +|||+|+ |.+|...++.+...  |. .|+++++++++.+.+...+.. ++..+-.  +. +.+.+..    .++|+||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~-~~~~D~~--d~-~~l~~~~----~~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVE-VRHGDYN--QP-ESLQKAF----AGVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCE-EEECCTT--CH-HHHHHHT----TTCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCe-EEEeccC--CH-HHHHHHH----hcCCEEEE
Confidence            6899988 99999999888877  88 577777777665544444443 2222221  21 2333331    36899999


Q ss_pred             ccCCH-------HHHHHHHHHhccC--CEEEEeccC
Q 022879          187 CAGLN-------KTMSTALGATCAG--GKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~-------~~~~~~~~~l~~~--G~~v~~g~~  213 (290)
                      +++..       .....+++.+...  ++++.++..
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            98741       1223444544433  488887753

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.09  E-value=0.087  Score=41.11  Aligned_cols=75  Identities=16%  Similarity=0.109  Sum_probs=53.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|+|.|+|.+|...++.+...|. .+++++.++++.+.+. .++.. ++.-+..+.   +.+++   .+-..+|+++-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~---~~l~~---a~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKAT-IIHGDGSHK---EILRD---AEVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSE-EEESCTTSH---HHHHH---HTCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCe-EEEcCCCCH---HHHHh---cCcccCCEEEEec
Confidence            58899999999999999999999 5889999999887654 45654 333222221   22332   2346799999999


Q ss_pred             CCHH
Q 022879          189 GLNK  192 (290)
Q Consensus       189 g~~~  192 (290)
                      +.+.
T Consensus        74 ~~d~   77 (218)
T 3l4b_C           74 PRDE   77 (218)
T ss_dssp             SCHH
T ss_pred             CCcH
Confidence            9753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.08  E-value=0.0045  Score=49.53  Aligned_cols=77  Identities=17%  Similarity=0.177  Sum_probs=46.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHH--HHHH--HhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE--KIQK--AMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~  181 (290)
                      .++++||+|+ |++|.+.++.+.. |. .|+.+++++++.+.+.++.....+..     |+.+...  ...+  ..-.++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHHhcCCC
Confidence            3678999988 9999988887655 87 68888899888776666433222221     2221110  0000  112379


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++|++.|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999985

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.07  E-value=0.052  Score=42.57  Aligned_cols=104  Identities=18%  Similarity=0.243  Sum_probs=68.4

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ...++.+||-.|+| .|..++.+++.++ ...+++++.+++..+.+++    .|....+.+  ...+..+.+.++.. .+
T Consensus        66 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~--~~~d~~~~~~~~~~-~~  141 (229)
T 2avd_A           66 RLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDL--RLKPALETLDELLA-AG  141 (229)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEE--EESCHHHHHHHHHH-TT
T ss_pred             HhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEE--EEcCHHHHHHHHHh-cC
Confidence            34677899999987 5888889998764 3489999999988877754    243111111  11233333333321 11


Q ss_pred             --CCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          179 --TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 --~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                        ..||+|+-....   ...+..+.+.|+++|.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence              579998865443   246788889999999998754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.07  E-value=0.0085  Score=47.98  Aligned_cols=77  Identities=21%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .++++||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+.  +  ...|. ...+++.+.+++..+.. +++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~-~~~~~~~~~~~~~~~~~-g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDV-TDSDAVDRAFTAVEEHQ-GPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCT-TCHHHHHHHHHHHHHHH-SSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccC-CCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            4678999987 9999999998888999 5777777765432111  1  11222 12223333444433322 4699999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99884

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.06  E-value=0.073  Score=43.58  Aligned_cols=97  Identities=15%  Similarity=0.131  Sum_probs=66.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCC---CEEEecCCCcccHHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA---DNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~---~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .+.++.+||-.|+|. |..+..+++..|. .+++++.++...+.+++    .+.   ..++.-+.....          .
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------~  146 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------C  146 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------S
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC----------C
Confidence            678999999998874 7788888887788 79999999988776654    232   122221111101          0


Q ss_pred             hCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          177 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       177 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....||+|+.....      ...+..+.+.|+|+|.++....
T Consensus       147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            23569999875332      3467889999999999988753

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.05  E-value=0.023  Score=47.69  Aligned_cols=90  Identities=19%  Similarity=0.180  Sum_probs=65.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++..+ +.+..+|...        .++    .++.    ...|+|+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l----~ell----~~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ--------LPL----EEIW----PLCDFITV  225 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE--------CCH----HHHG----GGCSEEEE
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee--------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999 68888877665 3556677532        122    2221    35799999


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++....    .+ ...++.+++++.++.++...
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  258 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGG  258 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCcc
Confidence            887632    12 35677889999999998643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.05  E-value=0.053  Score=46.44  Aligned_cols=86  Identities=17%  Similarity=0.159  Sum_probs=52.0

Q ss_pred             cCC-CCCCeEEEECC-CHHHHHHHHHHHH-CCCCeEEEEeCChhH----------------HHHHHHcCCCE-EEecCC-
Q 022879          103 ANI-GPETNVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYR----------------LSVAKEIGADN-IVKVST-  161 (290)
Q Consensus       103 ~~~-~~~~~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v~~~~~~----------------~~~~~~lg~~~-~~~~~~-  161 (290)
                      ..+ ..++++||+|+ +++|.+.+..+.. .|+ .|+.++.+.+.                .+.++..|... .+..+- 
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            344 55778899987 9999988877777 899 57766554321                22345556432 232222 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                      ..++..+.+++..+.. +++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            2233444444444333 579999999875

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.05  E-value=0.12  Score=42.65  Aligned_cols=88  Identities=15%  Similarity=0.093  Sum_probs=58.9

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      .+|.|.|.|.+|...+..+...|. .|++.++++++.+.+.+.|......  + ..+.           -...|+||-|+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~--~-~~e~-----------~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAA--S-AREF-----------AGVVDALVILV   72 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEES--S-STTT-----------TTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccC--C-HHHH-----------HhcCCEEEEEC
Confidence            579999999999999988888898 6889999999988888777654111  1 1110           13467777777


Q ss_pred             CCHHHHHHHH-------HHhccCCEEEEec
Q 022879          189 GLNKTMSTAL-------GATCAGGKVCLVG  211 (290)
Q Consensus       189 g~~~~~~~~~-------~~l~~~G~~v~~g  211 (290)
                      ..+......+       ..++++..++..+
T Consensus        73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence            7644444443       2344555555554

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.04  E-value=0.025  Score=46.28  Aligned_cols=95  Identities=18%  Similarity=0.245  Sum_probs=63.5

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-----C---------CCEEEecCCCcccHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-----G---------ADNIVKVSTNLQDIAEEVE  171 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-----g---------~~~~~~~~~~~~~~~~~~~  171 (290)
                      ..+.+||+.|+|. |..+..+++. +...+++++.+++..+.+++.     +         ...+-..   ..|..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~---~~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE---ECchHHHhc
Confidence            4678999998765 6677778777 766899999999988887753     1         1111111   123222222


Q ss_pred             HHHHHhCCCccEEEEccC----------CHHHHHHHHHHhccCCEEEEe
Q 022879          172 KIQKAMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~  210 (290)
                          . ...||+|+-...          ..+.+..+.+.|+++|.++..
T Consensus       149 ----~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          149 ----N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             ----H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ----c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence                2 467999975433          135678889999999999875

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.04  E-value=0.2  Score=42.09  Aligned_cols=132  Identities=16%  Similarity=0.135  Sum_probs=81.3

Q ss_pred             CeEEEECCCHHHHH-HHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGAGPIGLV-TMLAARA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Gag~vG~~-ai~la~~-~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      =++.|.|+|.+|.. .+...+. -+++.+.+.+.++++.+ +++++|...++.      ++.+.+      ....+|+|+
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~ell------~~~~iDaV~   91 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG------SYEEML------ASDVIDAVY   91 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES------SHHHHH------HCSSCSEEE
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC------CHHHHh------cCCCCCEEE
Confidence            37899999999974 3555554 47754445567776644 567788765542      333333      245799999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhh----hccCcEE-EEee-ecCCcHHHHHHHHHcCCC
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA----AVREVDV-VGVF-RYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~~~~i-~~~~-~~~~~l~~~~~~~~~g~~  253 (290)
                      -|+....+...+..+|. .|+-|.+.-+.....-....+    -.+++.+ .+.. .+...++.+-+++++|.+
T Consensus        92 I~tP~~~H~~~~~~al~-aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           92 IPLPTSQHIEWSIKAAD-AGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             ECSCGGGHHHHHHHHHH-TTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             EeCCCchhHHHHHHHHh-cCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            99998777777888886 467777753222111112221    1223322 2322 236678889999999887

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=96.03  E-value=0.041  Score=40.89  Aligned_cols=101  Identities=14%  Similarity=0.179  Sum_probs=62.9

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .++++.+||-.|+|. |..+..+++..|. ..+++++.++ ..+.    ....++..+....+..+.+...  .....+|
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~--~~~~~~D   90 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLER--VGDSKVQ   90 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHH--HTTCCEE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhcc--CCCCcee
Confidence            367889999999877 7788888888643 3799998887 3321    2222222222111211122221  1346799


Q ss_pred             EEEEc-----cCC------------HHHHHHHHHHhccCCEEEEecc
Q 022879          183 VSFDC-----AGL------------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       183 ~vid~-----~g~------------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +|+..     .+.            ...+..+.+.|+++|.++....
T Consensus        91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99983     232            2567778899999999987654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.03  E-value=0.011  Score=50.30  Aligned_cols=91  Identities=18%  Similarity=0.256  Sum_probs=64.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|++.|++.+++..+.+..+.+|...+       .++.+    +.    ...|+|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e----ll----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-------ENIEE----LV----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-------SSHHH----HH----HTCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-------CCHHH----HH----hcCCEEEE
Confidence            67899999999999999999999999438888877766666677774321       12222    21    24799998


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEecc
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  212 (290)
                      ++....    .+ ...+..|+++..++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            887531    12 245677888888888775

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.02  E-value=0.059  Score=47.42  Aligned_cols=96  Identities=14%  Similarity=0.117  Sum_probs=59.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+.+|+|.|+|.+|.+++..+... |. .|++++++.++.+.+.. .+.. .+..+.  .+.. .+.+..    .++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~-~~~~D~--~d~~-~l~~~l----~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSK-AISLDV--TDDS-ALDKVL----ADNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCE-EEECCT--TCHH-HHHHHH----HTSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCc-EEEEec--CCHH-HHHHHH----cCCCEE
Confidence            456899999999999999888877 66 68888888887665433 2332 222221  1221 233332    258999


Q ss_pred             EEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          185 FDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |+|++..........++..+-.++...
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEee
Confidence            999996422223344566666666553

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.01  E-value=0.017  Score=46.97  Aligned_cols=94  Identities=14%  Similarity=0.182  Sum_probs=56.0

Q ss_pred             eEEEECC-CHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +|||+|+ |.+|...++.+...  |. .|+++++++++.+.+...+.. ++..+-.  +. +.+.+.    -.++|+||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D~~--d~-~~~~~~----~~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGIT-VRQADYG--DE-AALTSA----LQGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCE-EEECCTT--CH-HHHHHH----TTTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCe-EEEcCCC--CH-HHHHHH----HhCCCEEEE
Confidence            5899998 99999999888877  88 577777777665544444443 2222221  21 233333    246899999


Q ss_pred             ccCCH-----HHHHHHHHHhcc-C-CEEEEecc
Q 022879          187 CAGLN-----KTMSTALGATCA-G-GKVCLVGM  212 (290)
Q Consensus       187 ~~g~~-----~~~~~~~~~l~~-~-G~~v~~g~  212 (290)
                      +++..     .....+++.+.. + ++++.++.
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            98742     123344444433 2 58888764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.00  E-value=0.11  Score=43.37  Aligned_cols=89  Identities=13%  Similarity=0.157  Sum_probs=60.7

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      ..+|.|.|.|.+|...++.+...|. .|.+.++++++.+.+.+.|....       .+..+.+        ...|+||-|
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~--------~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARAAA--------RDADIVVSM   94 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHHHH--------TTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHHHH--------hcCCEEEEE
Confidence            4589999999999999998888898 68899999999887777664321       1222211        246888888


Q ss_pred             cCCHHHHHHHH------HHhccCCEEEEecc
Q 022879          188 AGLNKTMSTAL------GATCAGGKVCLVGM  212 (290)
Q Consensus       188 ~g~~~~~~~~~------~~l~~~G~~v~~g~  212 (290)
                      +..+..+...+      ..++++..++..+.
T Consensus        95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             CCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            87644444333      34556666666654

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.00  E-value=0.074  Score=45.93  Aligned_cols=97  Identities=16%  Similarity=0.128  Sum_probs=60.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCC--CeEEEEeCChhHHHHH-HHcCC-----CEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGA--PRIVIVDVDDYRLSVA-KEIGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~--~~vv~v~~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .+|+|.|+|.+|..+++.+...|.  ..+++.+++.++.+.+ +.++.     ...+..+-.+   .+.++++...  .+
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d---~~~l~~~l~~--~~   76 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS---IEELVALINE--VK   76 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC---HHHHHHHHHH--HC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC---HHHHHHHHHh--hC
Confidence            378999999999999998887773  3688888888876644 33431     2222222211   1233333221  15


Q ss_pred             ccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          181 IDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       181 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +|+||++++..........++..+-.++.+
T Consensus        77 ~DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           77 PQIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            899999998644444455566666666655

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.99  E-value=0.015  Score=44.66  Aligned_cols=95  Identities=24%  Similarity=0.261  Sum_probs=58.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      .+|||+|+ |.+|...++.+...|. .|+++++++++.+.....+. .++..+-.  +. +.+.+..    .++|++|++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~--~~-~~~~~~~----~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDVL--QA-ADVDKTV----AGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCTT--SH-HHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecCC--CH-HHHHHHH----cCCCEEEEC
Confidence            68999998 9999999999888898 68888888766432111111 22322221  21 2343332    358999999


Q ss_pred             cCCHH----------HHHHHHHHhcc--CCEEEEecc
Q 022879          188 AGLNK----------TMSTALGATCA--GGKVCLVGM  212 (290)
Q Consensus       188 ~g~~~----------~~~~~~~~l~~--~G~~v~~g~  212 (290)
                      +|...          ....+++.+..  -++++.++.
T Consensus        75 a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss  111 (206)
T 1hdo_A           75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (206)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence            98532          12344444433  368888764

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.95  E-value=0.12  Score=40.46  Aligned_cols=101  Identities=15%  Similarity=0.208  Sum_probs=66.5

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHH----cCCC--EEEecCCCcccHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~~  174 (290)
                      .+.+++.+||-.|+|. |..++.+++.+  +. .+++++.+++..+.+++    .|..  .+-..   ..+..+.+..  
T Consensus        52 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~---~gda~~~l~~--  124 (221)
T 3dr5_A           52 TNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFL---LSRPLDVMSR--  124 (221)
T ss_dssp             SCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE---CSCHHHHGGG--
T ss_pred             hCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE---EcCHHHHHHH--
Confidence            4445566999888876 88899999987  44 79999999998777754    3432  22211   1232222211  


Q ss_pred             HHhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       .....||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       125 -~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          125 -LANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             -SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             -hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence             114679999865433   235778889999999998743

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.95  E-value=0.024  Score=44.61  Aligned_cols=95  Identities=18%  Similarity=0.210  Sum_probs=67.4

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEecCCCcccHHHHHHHHHHHh-CCCcc
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQKAM-GTGID  182 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d  182 (290)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.++...+.+++.. ...++..+.. ..+        ... ...||
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~--------~~~~~~~fD  113 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK-GEL--------PAGLGAPFG  113 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC-SSC--------CTTCCCCEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh-hcc--------CCcCCCCEE
Confidence            46788999998865 6677777777 77 7999999999988887643 2223322110 110        012 35799


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          183 VSFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      +|+........+..+.+.|+|+|+++..+
T Consensus       114 ~v~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          114 LIVSRRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             EEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            99988666677889999999999999554

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.94  E-value=0.032  Score=43.90  Aligned_cols=101  Identities=17%  Similarity=0.134  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC----CEEEecCCCcccHHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      .++...+.++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++...    ..++..     +..+.   + 
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-----d~~~~---~-  129 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG-----DGTLG---Y-  129 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES-----CGGGC---C-
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-----Ccccc---c-
Confidence            34456778999999999876 87888888874 4 79999999999888866321    122221     11110   0 


Q ss_pred             HHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       .....||+|+...........+.+.|+++|+++..-.
T Consensus       130 -~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          130 -EEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             -GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             -ccCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence             1235799999876554445678889999999987743

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.94  E-value=0.04  Score=43.88  Aligned_cols=70  Identities=23%  Similarity=0.281  Sum_probs=43.5

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +++||+|+ |.+|...++.+...|. .|+++++++++.+      ..    +.. +-.-.+.++++.+....++|++|++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~------~~----~~~-D~~~~~~~~~~~~~~~~~~d~vi~~   69 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIE------AD----LST-PGGRETAVAAVLDRCGGVLDGLVCC   69 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEE------CC----TTS-HHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHcc------cc----ccC-CcccHHHHHHHHHHcCCCccEEEEC
Confidence            47899988 9999999998888898 5888877655421      00    100 0011122333322122479999999


Q ss_pred             cCC
Q 022879          188 AGL  190 (290)
Q Consensus       188 ~g~  190 (290)
                      +|.
T Consensus        70 Ag~   72 (255)
T 2dkn_A           70 AGV   72 (255)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.94  E-value=0.014  Score=49.98  Aligned_cols=91  Identities=21%  Similarity=0.176  Sum_probs=64.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.++.|.|.|.+|...++.++.+|. .|++.+++..+.+..+.+|....       .++    .++.    ...|+|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l----~ell----~~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATR----EDMY----PVCDVVTL  253 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSH----HHHG----GGCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999 68888887666666666775321       122    2221    24789988


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++....    .+ ...+..|+++..++.++..
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECCCc
Confidence            876421    12 3456778888888887753

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.93  E-value=0.057  Score=43.30  Aligned_cols=96  Identities=21%  Similarity=0.243  Sum_probs=64.9

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC--EEEecCCCcccHHHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD--NIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~--~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ....++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++.    +..  .++..+.  .++.        .
T Consensus        33 l~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~--~~l~--------~   99 (260)
T 1vl5_A           33 AALKGNEEVLDVATGG-GHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA--EQMP--------F   99 (260)
T ss_dssp             HTCCSCCEEEEETCTT-CHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC---CCC--------S
T ss_pred             hCCCCCCEEEEEeCCC-CHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH--HhCC--------C
Confidence            4567899999998873 77777777764 4 799999999888877552    322  2222111  1110        1


Q ss_pred             hCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....||+|+.....      ...+..+.+.|+|+|.++...
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            23579999876432      357888999999999998864

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.93  E-value=0.034  Score=42.95  Aligned_cols=97  Identities=15%  Similarity=0.270  Sum_probs=65.0

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC----CEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      +.++.+||-.|+|. |..+..+++. |...+++++.++...+.+++...    ..++..+.  .++        ......
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~--~~~--------~~~~~~  107 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV--RKL--------DFPSAS  107 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT--TSC--------CSCSSC
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch--hcC--------CCCCCc
Confidence            57889999999876 7777777776 55479999999999888876421    12222111  111        012356


Q ss_pred             ccEEEEccC---------------------CHHHHHHHHHHhccCCEEEEeccC
Q 022879          181 IDVSFDCAG---------------------LNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       181 ~d~vid~~g---------------------~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|+|+....                     ....+..+.+.|+++|+++.....
T Consensus       108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~  161 (215)
T 2pxx_A          108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA  161 (215)
T ss_dssp             EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred             ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence            999986321                     124567788899999999987654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.92  E-value=0.051  Score=43.60  Aligned_cols=34  Identities=32%  Similarity=0.531  Sum_probs=29.5

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.+|+|.|+|++|..++..+...|...+..++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4799999999999999999999999888887554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.91  E-value=0.049  Score=44.61  Aligned_cols=74  Identities=14%  Similarity=0.276  Sum_probs=48.7

Q ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEecCCCcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~G-ag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      +++++||+| +|++|.+++..+...|+ .|+.+++++++.+.+ +.+    +.. ...+..    +. +.+++.    -.
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~----~~-~~~~~~----~~  187 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----DD-ASRAEA----VK  187 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----SH-HHHHHH----TT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCC----CH-HHHHHH----HH
Confidence            678999998 59999999999999999 488888887765533 333    221 112221    11 123332    13


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|++++++|.
T Consensus       188 ~~DvlVn~ag~  198 (287)
T 1lu9_A          188 GAHFVFTAGAI  198 (287)
T ss_dssp             TCSEEEECCCT
T ss_pred             hCCEEEECCCc
Confidence            48999999973

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.91  E-value=0.047  Score=45.18  Aligned_cols=100  Identities=19%  Similarity=0.198  Sum_probs=64.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEecCCCcccHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ....+.+||+.|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+-..   ..|..+.+.    
T Consensus        92 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~---~~Da~~~l~----  163 (304)
T 2o07_A           92 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH---VGDGFEFMK----  163 (304)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHH----
T ss_pred             hCCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHh----
Confidence            345678999998765 667778887765558999999999888776521        1111111   123222222    


Q ss_pred             HhCCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .....||+||-....          .+.+..+.+.|+++|.++.-.
T Consensus       164 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          164 QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            134679999843322          235778899999999998754

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.90  E-value=0.11  Score=42.50  Aligned_cols=100  Identities=17%  Similarity=0.166  Sum_probs=65.3

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC-------CEEEecCCCcccHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA-------DNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~-------~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ...++.+||+.|+|. |..+..+++..+...+++++-+++..+.+++ +..       ..+-.   ...|..+.+..   
T Consensus        75 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~---~~~D~~~~l~~---  147 (283)
T 2i7c_A           75 VSKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNV---FIEDASKFLEN---  147 (283)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEE---EESCHHHHHHH---
T ss_pred             cCCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEE---EECChHHHHHh---
Confidence            345678999998755 5666777776655589999999999888876 321       11111   11233222221   


Q ss_pred             HhCCCccEEEEccC----C------HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAG----L------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g----~------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ....||+|+-...    .      .+.+..+.+.|+++|.++...
T Consensus       148 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          148 -VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             -CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             -CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence             2567999976321    1      356788899999999998764

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.88  E-value=0.035  Score=45.75  Aligned_cols=98  Identities=17%  Similarity=0.150  Sum_probs=62.8

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEecCCCcccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+.+||+.|+|. |..+..+++..+...+++++-+++..+.+++.-        ...+-..   ..|..+.+    ...
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~l----~~~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV---IANGAEYV----RKF  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHG----GGC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE---ECcHHHHH----hhC
Confidence            4568999998765 667777777766668999999999888776521        1111111   12322222    112


Q ss_pred             CCCccEEEEccCC-----------HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL-----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+-....           .+.+..+.+.|+++|.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4579999743211           356778889999999998863

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.87  E-value=0.074  Score=42.90  Aligned_cols=100  Identities=14%  Similarity=0.144  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CC---CEEEecCCCcccHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GA---DNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~---~~~~~~~~~~~~~~~~~~~  172 (290)
                      ++...++++.+||-.|+|. |..+..+++..+. .+++++.+++..+.+++.    +.   ..++..+....+       
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------  124 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-------  124 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-------
Confidence            4456778999999999876 7788888888787 799999999887776542    32   122221111101       


Q ss_pred             HHHHhCCCccEEEEcc-----C-CHHHHHHHHHHhccCCEEEEec
Q 022879          173 IQKAMGTGIDVSFDCA-----G-LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                         .....||+|+..-     . ....+..+.+.|+|+|+++...
T Consensus       125 ---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          125 ---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             ---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence               0235699998532     1 1346778888999999998765

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.87  E-value=0.066  Score=44.52  Aligned_cols=98  Identities=17%  Similarity=0.194  Sum_probs=64.1

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-------CEEEecCCCcccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA-------DNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+.+||+.|+|. |..+..+++..+...+++++-+++-.+.+++. ..       ..+ .+  ...|..+.+..    .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv-~~--~~~D~~~~l~~----~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKL-DL--FCGDGFEFLKN----H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTE-EE--ECSCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCE-EE--EEChHHHHHHh----c
Confidence            4568999998765 66777888776555899999999998888763 21       111 11  11233333322    3


Q ss_pred             CCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+-....          .+.+..+.+.|+++|.++.-.
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            4679999854421          245778889999999998764

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.86  E-value=0.043  Score=46.34  Aligned_cols=91  Identities=19%  Similarity=0.218  Sum_probs=62.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|.+|.|.|.|.+|...++.++ .+|. .|++.++++++.+...++|....       .++.+.++        ..|+|+
T Consensus       162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~--------~aDvVi  225 (348)
T 2w2k_A          162 RGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-------DSLEELAR--------RSDCVS  225 (348)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHHH--------HCSEEE
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-------CCHHHHhc--------cCCEEE
Confidence            5789999999999999999999 9999 68888888766665556664321       12222221        368888


Q ss_pred             EccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          186 DCAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      .++....    .+ ...+..++++..++..+..
T Consensus       226 l~vp~~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          226 VSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             ECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             EeCCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            8876532    11 2456677877777776643

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.86  E-value=0.016  Score=48.58  Aligned_cols=90  Identities=18%  Similarity=0.223  Sum_probs=64.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.++++++.+....+|...        .++.+.++        ..|+|+-
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~--------~~l~ell~--------~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ--------VACSELFA--------SSDFILL  206 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE--------CCHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee--------CCHHHHHh--------hCCEEEE
Confidence            47899999999999999999999999 6888888875555566666421        12222221        2688988


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++....    .+ ...+..|+++..++.++..
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            876421    11 3567778888888888754

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.85  E-value=0.085  Score=42.54  Aligned_cols=100  Identities=20%  Similarity=0.211  Sum_probs=64.5

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE--ecCCCcccHHHHHHHHHHHh
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV--KVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~~  177 (290)
                      +....+.++.+||=.|+|. |..++.+++. |. .|++++.+++..+.+++.-....+  +....+....       ...
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~-------~~~  107 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIP-------KEL  107 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCC-------GGG
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccc-------ccc
Confidence            4456788999999999875 7788888875 77 799999999999988763322111  1111100000       011


Q ss_pred             CCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEe
Q 022879          178 GTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ...||+|+-+..-        ...+..+.+.| |+|+++..
T Consensus       108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            3579999875321        12566677788 99998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.84  E-value=0.034  Score=46.47  Aligned_cols=77  Identities=17%  Similarity=0.161  Sum_probs=47.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH--HHHHHcCC---CEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL--SVAKEIGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~--~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +.+|||+|+ |.+|...++.+...|. .|+++++++++.  +.++.++.   ...+..+-  .+. +.+.++.+.  .++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~-~~~~~~~~~--~~~   76 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDL--LEF-SNIIRTIEK--VQP   76 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCT--TCH-HHHHHHHHH--HCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCC--CCH-HHHHHHHHh--cCC
Confidence            578999988 9999999998888898 688887765432  23344421   11221111  121 223333221  158


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |+||++++.
T Consensus        77 d~vih~A~~   85 (345)
T 2z1m_A           77 DEVYNLAAQ   85 (345)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.82  E-value=0.14  Score=40.82  Aligned_cols=103  Identities=15%  Similarity=0.164  Sum_probs=66.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh-
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM-  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-  177 (290)
                      ..++.+||-.|+|. |..++.+++.+  +. .+++++.+++..+.+++    .|...-+.+.  ..+..+.+..+...+ 
T Consensus        77 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~~  152 (247)
T 1sui_A           77 LINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDEK  152 (247)
T ss_dssp             HTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSGG
T ss_pred             hhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEE--ECCHHHHHHHHHhccC
Confidence            45678999998865 77888899887  45 79999999988877754    3432111111  123333333322111 


Q ss_pred             -CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          178 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ...||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence             3579999854432   346778899999999998643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.82  E-value=0.048  Score=43.09  Aligned_cols=73  Identities=22%  Similarity=0.346  Sum_probs=46.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++++||+|+ |.+|...++.+...|+ .|++++++++ .   +.+   ..+..+-. .+++.+.++++ +.. .++|+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~-~~~-~~~d~li   71 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARA-QEE-APLFAVV   71 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHH-HHH-SCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHH-Hhh-CCceEEE
Confidence            578999988 9999999988888899 5777777654 1   111   23332222 22333344443 222 4799999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        72 ~~ag~   76 (242)
T 1uay_A           72 SAAGV   76 (242)
T ss_dssp             ECCCC
T ss_pred             Ecccc
Confidence            99874

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.80  E-value=0.065  Score=42.48  Aligned_cols=104  Identities=15%  Similarity=0.176  Sum_probs=66.5

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh--
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM--  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~--  177 (290)
                      ..++.+||-.|+|. |..++.+++.+. ...+++++.+++..+.+++    .|....+.+  ...+..+.+..+...+  
T Consensus        68 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~--~~gda~~~l~~l~~~~~~  144 (237)
T 3c3y_A           68 LVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINF--IESDAMLALDNLLQGQES  144 (237)
T ss_dssp             HTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHHSTTC
T ss_pred             hhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhccCC
Confidence            45678999998765 778888888864 2379999999998877754    343211111  1123333333332111  


Q ss_pred             CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       145 ~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          145 EGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence            3579999865432   245778889999999988643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.78  E-value=0.023  Score=46.77  Aligned_cols=92  Identities=22%  Similarity=0.280  Sum_probs=54.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh-------hHHHHHH---HcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-------YRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~-------~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ..+|||+|+ |.+|...++.+...|.+ |+++++++       ++.+.++   ..+.. ++..+-.  +. +.+.+..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~--d~-~~l~~~~--   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNP-TYALVRKTITAANPETKEELIDNYQSLGVI-LLEGDIN--DH-ETLVKAI--   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTTCE-EEECCTT--CH-HHHHHHH--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCc-EEEEECCCcccCChHHHHHHHHHHHhCCCE-EEEeCCC--CH-HHHHHHH--
Confidence            467999998 99999999888888984 66676665       4444333   23443 3322221  21 2333332  


Q ss_pred             hCCCccEEEEccCCH--HHHHHHHHHhccC---CEEE
Q 022879          177 MGTGIDVSFDCAGLN--KTMSTALGATCAG---GKVC  208 (290)
Q Consensus       177 ~~~~~d~vid~~g~~--~~~~~~~~~l~~~---G~~v  208 (290)
                        .++|+||++++..  .....+++.++..   .+++
T Consensus        75 --~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 --KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             --TTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             --hCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence              3699999998852  1223444444332   4665

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=95.78  E-value=0.043  Score=46.72  Aligned_cols=110  Identities=16%  Similarity=0.165  Sum_probs=70.7

Q ss_pred             hhHHHHHHHHhcCC-CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh------------hHHHHHHHcCCCEEEe
Q 022879           92 PLSVGVHACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD------------YRLSVAKEIGADNIVK  158 (290)
Q Consensus        92 ~~~ta~~~l~~~~~-~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~------------~~~~~~~~lg~~~~~~  158 (290)
                      .++.-+.+++..+. -+..+|+|.|+|..|..+++++..+|++.++.++++-            .+..+++.-..     
T Consensus       171 ~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~-----  245 (398)
T 2a9f_A          171 VLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR-----  245 (398)
T ss_dssp             HHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC-----
T ss_pred             HHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc-----
Confidence            44444455555332 3557999999999999999999999998899998762            11222222110     


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  215 (290)
                      + ....++.+.++        +.|++|-+++....-...++.|+++..++.+..+..
T Consensus       246 ~-~~~~~L~eav~--------~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~  293 (398)
T 2a9f_A          246 E-FKSGTLEDALE--------GADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIP  293 (398)
T ss_dssp             T-TCCCSCSHHHH--------TTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred             c-cchhhHHHHhc--------cCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCc
Confidence            0 11223333331        369999998753345578899999999988876653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=95.77  E-value=0.094  Score=45.38  Aligned_cols=86  Identities=19%  Similarity=0.076  Sum_probs=50.6

Q ss_pred             cCCCCCCeEEEECC-CHHHHH--HHHHHHHCCCCeEEEEeCChh----------------HHHHHHHcCCCE-EEecCCC
Q 022879          103 ANIGPETNVLIMGA-GPIGLV--TMLAARAFGAPRIVIVDVDDY----------------RLSVAKEIGADN-IVKVSTN  162 (290)
Q Consensus       103 ~~~~~~~~vlI~Ga-g~vG~~--ai~la~~~g~~~vv~v~~~~~----------------~~~~~~~lg~~~-~~~~~~~  162 (290)
                      .....++++||+|+ +++|.+  .+......|+ .|+.++.+..                -.+.++..|... .+..+-.
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            44577889999987 999987  4444444599 5777765422                122334555432 2222222


Q ss_pred             -cccHHHHHHHHHHHhCCCccEEEEccCC
Q 022879          163 -LQDIAEEVEKIQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~d~vid~~g~  190 (290)
                       .++..+.++++.+ .-+++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~-~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKD-EFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHH-TTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHH-HcCCCCEEEECCcc
Confidence             2333344444433 33579999999886

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.75  E-value=0.1  Score=43.79  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=47.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHHc------CCCEEEecCCCcccHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKEI------GADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~l------g~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      .+.+|||+|+ |.+|...++.+...|. .|++++++.    +..+.++.+      ..-.++..+-.  +. +.+.++. 
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~-~~~~~~~-   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIR--DL-TTCEQVM-   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTT--CH-HHHHHHT-
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCC--CH-HHHHHHh-
Confidence            3579999998 9999999999988998 577776643    333333332      22223332221  21 2333332 


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                         .++|+||++++.
T Consensus        99 ---~~~d~Vih~A~~  110 (351)
T 3ruf_A           99 ---KGVDHVLHQAAL  110 (351)
T ss_dssp             ---TTCSEEEECCCC
T ss_pred             ---cCCCEEEECCcc
Confidence               379999999984

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.75  E-value=0.044  Score=45.73  Aligned_cols=90  Identities=17%  Similarity=0.082  Sum_probs=63.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.++ ++++ +....+|... .      .++.+.++        ..|+|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~------~~l~ell~--------~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H------DSLDSLLS--------VSQFFS  207 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C------SSHHHHHH--------HCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c------CCHHHHHh--------hCCEEE
Confidence            57789999999999999999999999 6888888 6665 3455667532 1      12222221        378999


Q ss_pred             EccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          186 DCAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      -++....    .+ ...+..++++..++.++..
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence            8887432    12 3456778888888888753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.74  E-value=0.044  Score=45.18  Aligned_cols=92  Identities=18%  Similarity=0.221  Sum_probs=55.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-----hhHHHHHHHc---CCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-----DYRLSVAKEI---GADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-----~~~~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ..+|||+|+ |.+|...++.+...|. .|++++++     +++.+.++.+   +.. ++..+-  .+. +.+.+..    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~--~d~-~~l~~~~----   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL--DDH-QRLVDAL----   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS--SCH-HHHHHHH----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCC--CCH-HHHHHHH----
Confidence            357999998 9999999998888898 47777676     4444443332   332 332221  121 2343332    


Q ss_pred             CCccEEEEccCCH------HHHHHHHHHhccCC---EEE
Q 022879          179 TGIDVSFDCAGLN------KTMSTALGATCAGG---KVC  208 (290)
Q Consensus       179 ~~~d~vid~~g~~------~~~~~~~~~l~~~G---~~v  208 (290)
                      .++|+||++++..      .....+++.++..|   +++
T Consensus        75 ~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           75 KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             TTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             hCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            3699999998752      12334555554433   676

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.72  E-value=0.032  Score=49.97  Aligned_cols=83  Identities=13%  Similarity=0.154  Sum_probs=50.9

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCCh-----------------hHHHHHHHcCCCE-EEecCCCcc
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDD-----------------YRLSVAKEIGADN-IVKVSTNLQ  164 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~-----------------~~~~~~~~lg~~~-~~~~~~~~~  164 (290)
                      ++++.++||+|+ |++|...++.+...|+++++.+ +++.                 +..+.++..|... ++..+-.+.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            457889999987 9999999988888899767776 6662                 1122334445432 222222222


Q ss_pred             cHHHHHHHHHHH--hCCCccEEEEccCC
Q 022879          165 DIAEEVEKIQKA--MGTGIDVSFDCAGL  190 (290)
Q Consensus       165 ~~~~~~~~~~~~--~~~~~d~vid~~g~  190 (290)
                         +.++++...  ...++|.+|++.|.
T Consensus       328 ---~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          328 ---EAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             ---HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             ---HHHHHHHHHHHhcCCCcEEEECCcC
Confidence               233333221  23579999999985

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=95.72  E-value=0.066  Score=45.60  Aligned_cols=85  Identities=21%  Similarity=0.210  Sum_probs=51.7

Q ss_pred             CCCCCeEEEECC-CHHHHHH-HHHHHHCCCCeEEEEeCChh----------------HHHHHHHcCCC-EEEecCCCcc-
Q 022879          105 IGPETNVLIMGA-GPIGLVT-MLAARAFGAPRIVIVDVDDY----------------RLSVAKEIGAD-NIVKVSTNLQ-  164 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~a-i~la~~~g~~~vv~v~~~~~----------------~~~~~~~lg~~-~~~~~~~~~~-  164 (290)
                      ...++++||+|+ +++|++. +.+|...|+ .++.+....+                -.+.+++.|.. ..++.+-.++ 
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            356789999988 9999864 566656788 4666644321                12344555643 3344333333 


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEccCCH
Q 022879          165 DIAEEVEKIQKAMGTGIDVSFDCAGLN  191 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~d~vid~~g~~  191 (290)
                      ...+.++++. ...+++|+++++++.+
T Consensus       126 ~i~~vi~~i~-~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAK-KKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHH-HTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHH-HhcCCCCEEEEecccc
Confidence            3334444443 3557899999998853

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.71  E-value=0.15  Score=42.94  Aligned_cols=131  Identities=14%  Similarity=0.057  Sum_probs=78.3

Q ss_pred             CeEEEECCCHHHH-HHHHHHHHC-CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGAGPIGL-VTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Gag~vG~-~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -+|.|.|+|.+|. ..+..++.. +++.+.+.+.++++.+ +.+.+|....       .++.+    +.  ....+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~~~----ll--~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-------EGYPA----LL--ERDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-------ESHHH----HH--TCTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-------CCHHH----Hh--cCCCCCEEE
Confidence            4789999999997 555555555 7754445577776655 4566776432       23332    22  235699999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEEE-Eee-ecCCcHHHHHHHHHcCCC
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDVV-GVF-RYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i~-~~~-~~~~~l~~~~~~~~~g~~  253 (290)
                      .|+....+...+..++.. |+-+.+.-+.....-....   + -.+++.+. +.. .+...++.+.+++++|.+
T Consensus        95 i~tp~~~h~~~~~~al~a-Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRA-GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHC-CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence            999987777777777765 4545554221111111111   1 12333332 222 236788899999999887

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.71  E-value=0.14  Score=42.47  Aligned_cols=92  Identities=21%  Similarity=0.180  Sum_probs=61.4

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      .+|.|.|.|.+|...++.++..|.. .|++.++++++.+.+.++|......  ...+++  .        -...|+||-|
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~--~~~~~~--~--------~~~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TSIAKV--E--------DFSPDFVMLS  101 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SCTTGG--G--------GGCCSEEEEC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc--CCHHHH--h--------hccCCEEEEe
Confidence            6899999999999999988888873 5888999999998888888531111  111110  0        1347888888


Q ss_pred             cCCHH---HHHHHHHHhccCCEEEEecc
Q 022879          188 AGLNK---TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       188 ~g~~~---~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +....   .+..+...++++..++.++.
T Consensus       102 vp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            87532   23344445666666666653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.71  E-value=0.086  Score=48.06  Aligned_cols=81  Identities=23%  Similarity=0.320  Sum_probs=50.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh---------hHHH----HHHHcCCCEEEecCCCcccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---------YRLS----VAKEIGADNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~---------~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~  172 (290)
                      .++++||+|+ +++|.+.++.+...|+ .|++++.+.         ++.+    .++..|...+.+..+ .++..+.+++
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d-~~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN-VLDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC-TTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC-HHHHHHHHHH
Confidence            4678899987 9999999999999999 577765543         2222    223345444444332 3334444444


Q ss_pred             HHHHhCCCccEEEEccCC
Q 022879          173 IQKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~  190 (290)
                      ..+.. +.+|+++++.|.
T Consensus        85 ~~~~~-G~iDiLVnNAGi  101 (604)
T 2et6_A           85 AVKNF-GTVHVIINNAGI  101 (604)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            43333 469999999985

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.71  E-value=0.03  Score=45.01  Aligned_cols=96  Identities=14%  Similarity=0.053  Sum_probs=61.5

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC--------------------CEEEecCCCc
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA--------------------DNIVKVSTNL  163 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~--------------------~~~~~~~~~~  163 (290)
                      ..++.+||..|+|. |..+..|++. |+ .|++++.++...+.+++ .+.                    ..+--..   
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---  139 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYC---  139 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE---
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEE---
Confidence            46788999998865 7777777765 88 79999999999888754 321                    1111000   


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEe
Q 022879          164 QDIAEEVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      .|+    .++.......||+|++...-        ...+..+.+.|+|+|+++..
T Consensus       140 ~D~----~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          140 CSI----FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             SCT----TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             Ccc----ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            111    11111112579999974321        13567788899999998644

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.71  E-value=0.19  Score=41.19  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=66.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHc-------CCC-EEEecCCCcccHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEI-------GAD-NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-------g~~-~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ...++.+||=.|+|. |..+..+++.. ....+++++.++...+.+++.       ... .++..+...-++..    ..
T Consensus        33 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~  107 (299)
T 3g5t_A           33 HDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG----AD  107 (299)
T ss_dssp             CCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC----TT
T ss_pred             hcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc----cc
Confidence            346889999999875 88899999865 444899999999988877653       211 22221111111100    00


Q ss_pred             HHhCCCccEEEEccCC-----HHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCAGL-----NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~-----~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....+.||+|+.....     ...+..+.+.|+++|.++...
T Consensus       108 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          108 SVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             TTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            0001579999875432     457888999999999998744

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.70  E-value=0.16  Score=41.89  Aligned_cols=101  Identities=20%  Similarity=0.115  Sum_probs=65.0

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEecCCCcccHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ...++.+||+.|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+-..   ..|..+.+.+   
T Consensus        92 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~~~~---  164 (304)
T 3bwc_A           92 SHPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR---VGDGLAFVRQ---  164 (304)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHS---
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHHh---
Confidence            346778999998765 667777777655558999999998888776522        1111111   1233222211   


Q ss_pred             HhCCCccEEEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .....||+|+-....          .+.+..+.+.|+++|.++...
T Consensus       165 ~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          165 TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            024679999864321          246778889999999998864

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.69  E-value=0.089  Score=41.18  Aligned_cols=95  Identities=14%  Similarity=0.238  Sum_probs=64.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-----------EEEecCCCcccHHHHHHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-----------NIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-----------~~~~~~~~~~~~~~~~~~~  173 (290)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++....           .++..+.  .++       
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~--~~~-------   95 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA--SSL-------   95 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT--TSC-------
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc--ccc-------
Confidence            56888999998875 7777777777 77 799999999998888763211           1221111  110       


Q ss_pred             HHHhCCCccEEEEccC-----C-H---HHHHHHHHHhccCCEEEEecc
Q 022879          174 QKAMGTGIDVSFDCAG-----L-N---KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g-----~-~---~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       ......+|+|+-...     . .   ..+..+.+.|+++|+++....
T Consensus        96 -~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A           96 -SFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             -CSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence             012457999986431     1 2   467788899999999988754

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.66  E-value=0.047  Score=45.53  Aligned_cols=42  Identities=17%  Similarity=0.129  Sum_probs=34.3

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      .++.+|||+|+ |.+|...++.+...|. .|++++++..+.+.+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~   51 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANL   51 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHH
Confidence            45789999988 9999999998888898 688888887665543

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.65  E-value=0.13  Score=41.86  Aligned_cols=91  Identities=22%  Similarity=0.164  Sum_probs=60.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCC-CccEEEE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vid  186 (290)
                      .+|.|.|+|.+|.+.++.+...|.. .|++.++++++.+.++++|......  .   +..+.        -. ..|+||-
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~---~~~~~--------~~~~aDvVil   68 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKV--------EDFSPDFVML   68 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CGGGG--------GGTCCSEEEE
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--C---CHHHH--------hcCCCCEEEE
Confidence            3688999999999999988888862 4888899999888888887532111  1   11111        13 5899999


Q ss_pred             ccCCHHH---HHHHHHHhccCCEEEEecc
Q 022879          187 CAGLNKT---MSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~~---~~~~~~~l~~~G~~v~~g~  212 (290)
                      |+..+..   +......++++..++.++.
T Consensus        69 avp~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           69 SSPVRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             cCCHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            9886432   2223344566666666553

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.64  E-value=0.027  Score=47.37  Aligned_cols=94  Identities=29%  Similarity=0.259  Sum_probs=55.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHH---cCCCEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      ..+|||+|+ |.+|...++.+...|. .|+++++++    ++.+.++.   .+.. ++..+-.  + .+.+.+..+  ..
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~-~~~~Dl~--d-~~~l~~~~~--~~   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAI-IVYGLIN--E-QEAMEKILK--EH   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCE-EEECCTT--C-HHHHHHHHH--HT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcE-EEEeecC--C-HHHHHHHHh--hC
Confidence            358999998 9999999998888898 477776655    45443333   3443 3322221  2 223333321  13


Q ss_pred             CccEEEEccCCHH--HHHHHHHHhccCC---EEE
Q 022879          180 GIDVSFDCAGLNK--TMSTALGATCAGG---KVC  208 (290)
Q Consensus       180 ~~d~vid~~g~~~--~~~~~~~~l~~~G---~~v  208 (290)
                      ++|+||++++...  ....+++.++..|   +++
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v  116 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL  116 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence            7999999998521  2234555554444   555

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.64  E-value=0.1  Score=45.29  Aligned_cols=106  Identities=16%  Similarity=0.149  Sum_probs=67.7

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-----------HHcC--CCEEEec--CCCc
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-----------KEIG--ADNIVKV--STNL  163 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-----------~~lg--~~~~~~~--~~~~  163 (290)
                      +++...++++++||=.|+|. |..++.+++..|...+++++.++...+.+           +.+|  ...+-..  +...
T Consensus       234 ml~~l~l~~g~~VLDLGCGs-G~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~  312 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  312 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence            44556788999999998875 88888999887876799999999865544           3345  2222111  1111


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEc--cCCH---HHHHHHHHHhccCCEEEEec
Q 022879          164 QDIAEEVEKIQKAMGTGIDVSFDC--AGLN---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~d~vid~--~g~~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+  .+..    ....||+|+-.  ...+   ..+..+.+.|+++|+++...
T Consensus       313 ~~~--~~~~----~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          313 DNN--RVAE----LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             TCH--HHHH----HGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccc--cccc----ccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            111  1111    12469999852  2222   23457888899999999874

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.63  E-value=0.12  Score=43.57  Aligned_cols=131  Identities=15%  Similarity=0.091  Sum_probs=78.8

Q ss_pred             CeEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -+|.|.|+|.+|...+..++..  +++.+.+.+.++++.+ +.+.++. ..+      .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~------~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH------ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE------SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee------CCHHHHhc------CCCCCEEE
Confidence            4789999999998777766665  6744446677777755 4566775 322      23333332      24699999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh----hhccCcEE-EEee-ecCCcHHHHHHHHHcCCC
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGVF-RYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~-~~~~~l~~~~~~~~~g~~  253 (290)
                      -|+....+...+..++..+ +-+.+.-+.....-....    .-.++..+ .+.. .+...++.+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~g-k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAG-FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCC-CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCC
Confidence            9999876777777777754 555554221111111111    11223333 2322 236678889999999887

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.60  E-value=0.057  Score=43.84  Aligned_cols=102  Identities=18%  Similarity=0.200  Sum_probs=67.8

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHc-----CCCEEEecCCCcccHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEI-----GADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ....++++++||-.|+|. |..+..+++.. ....+++++.+++..+.+++.     |...+.....   +..+.     
T Consensus       104 ~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~-----  174 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADF-----  174 (275)
T ss_dssp             --CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTC-----
T ss_pred             HHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC---chhcc-----
Confidence            446788999999998874 77778888873 223799999999988877552     4222211111   11110     


Q ss_pred             HHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       .....||+|+-....+ ..+..+.+.|+++|+++....
T Consensus       175 -~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          175 -ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             -CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             -CcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence             0235699998866543 467888999999999988753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.60  E-value=0.037  Score=46.14  Aligned_cols=81  Identities=14%  Similarity=0.035  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH--HHHHHHcC---CCEEEecCCCcccHHHHHHHHHHHh
Q 022879          104 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKEIG---ADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       104 ~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~--~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ...++.+|||+|+ |.+|...++.+...|. .|+++++++.+  ...++.+.   ....+..+-.  +. +.+.++.+  
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~-~~~~~~~~--   83 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA--DA-CSVQRAVI--   83 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTT--CH-HHHHHHHH--
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCC--CH-HHHHHHHH--
Confidence            3467889999988 9999999998888898 57777766543  12233331   1112222211  21 22333322  


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      +.++|+||++++.
T Consensus        84 ~~~~d~Vih~A~~   96 (335)
T 1rpn_A           84 KAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             HcCCCEEEECccc
Confidence            1158999999874

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.60  E-value=0.061  Score=47.12  Aligned_cols=100  Identities=20%  Similarity=0.209  Sum_probs=63.0

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..++++++||=.|+|+ |..++++++.++ ...|++++.++++.+.++    .+|...+.....   |... +...   .
T Consensus       101 L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~---Da~~-l~~~---~  172 (456)
T 3m4x_A          101 AAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH---APAE-LVPH---F  172 (456)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC---CHHH-HHHH---H
T ss_pred             cCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC---CHHH-hhhh---c
Confidence            3578899998887644 445566666543 237999999999887764    366543332222   2221 1111   2


Q ss_pred             CCCccEEEE---ccCCH-------------------------HHHHHHHHHhccCCEEEEe
Q 022879          178 GTGIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 ~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  210 (290)
                      ...||.|+-   |+|..                         ..+..+++.|+++|+++..
T Consensus       173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  233 (456)
T 3m4x_A          173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS  233 (456)
T ss_dssp             TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            457999975   43321                         3466788899999998853

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.59  E-value=0.23  Score=40.99  Aligned_cols=91  Identities=14%  Similarity=0.137  Sum_probs=62.0

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      ..+|.|.|.|.+|...++.+...|. .|++.++++++.+.+.+.|....       .+..+.++        ..|+||-+
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~e~~~--------~aDvVi~~   72 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-------ESVKAALS--------ASPATIFV   72 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-------SSHHHHHH--------HSSEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-------CCHHHHHh--------cCCEEEEE
Confidence            4579999999999999988888898 58888999998887777665321       22222221        26889988


Q ss_pred             cCCHHHHHHHH-----HHhccCCEEEEeccCC
Q 022879          188 AGLNKTMSTAL-----GATCAGGKVCLVGMGH  214 (290)
Q Consensus       188 ~g~~~~~~~~~-----~~l~~~G~~v~~g~~~  214 (290)
                      +..+..+...+     ..+.++..++..+...
T Consensus        73 vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~  104 (306)
T 3l6d_A           73 LLDNHATHEVLGMPGVARALAHRTIVDYTTNA  104 (306)
T ss_dssp             CSSHHHHHHHHTSTTHHHHTTTCEEEECCCCC
T ss_pred             eCCHHHHHHHhcccchhhccCCCEEEECCCCC
Confidence            88754444433     2345566666665433

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.58  E-value=0.1  Score=43.34  Aligned_cols=101  Identities=24%  Similarity=0.300  Sum_probs=64.9

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ...++++++||=.|+|+ |..++++++.++ ...+++++.++++.+.+++    +|...+........++..        
T Consensus       113 ~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~--------  183 (315)
T 1ixk_A          113 ALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE--------  183 (315)
T ss_dssp             HHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG--------
T ss_pred             HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc--------
Confidence            34678999999887765 666777887763 2379999999998877654    454322222121111110        


Q ss_pred             hCCCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....||.|+-   |+|.                         ...+..+.+.|+++|+++...
T Consensus       184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st  246 (315)
T 1ixk_A          184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  246 (315)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence            1346999875   3331                         245677889999999998753

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.58  E-value=0.069  Score=41.82  Aligned_cols=100  Identities=16%  Similarity=0.098  Sum_probs=64.0

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..++++++||-.|+|. |..+..+++..|. ..+++++.+++..+.+++    .....++.-+......   ..    ..
T Consensus        69 ~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~----~~  140 (227)
T 1g8a_A           69 FPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE---YR----AL  140 (227)
T ss_dssp             CCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG---GT----TT
T ss_pred             cCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcch---hh----cc
Confidence            4577899999998876 7788888888652 379999999976555433    2111222211111000   00    01


Q ss_pred             CCCccEEEEccCCH----HHHHHHHHHhccCCEEEEe
Q 022879          178 GTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 ~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  210 (290)
                      ...+|+|+.....+    ..+..+.+.|+++|.++..
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            24699998765543    2377888999999999886

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.56  E-value=0.15  Score=42.25  Aligned_cols=88  Identities=16%  Similarity=0.174  Sum_probs=59.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      .+|.|.|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ...|+||.|+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~DvVi~av   94 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G----RTPAEVV--------STCDITFACV   94 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C----SCHHHHH--------HHCSEEEECC
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c----CCHHHHH--------hcCCEEEEeC
Confidence            579999999999999888888898 4788888888877776666421   1    1222222        1368999988


Q ss_pred             CCHHHHHHHHH-------HhccCCEEEEecc
Q 022879          189 GLNKTMSTALG-------ATCAGGKVCLVGM  212 (290)
Q Consensus       189 g~~~~~~~~~~-------~l~~~G~~v~~g~  212 (290)
                      ..+..+...+.       .+.++..++.++.
T Consensus        95 ~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~  125 (316)
T 2uyy_A           95 SDPKAAKDLVLGPSGVLQGIRPGKCYVDMST  125 (316)
T ss_dssp             SSHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred             CCHHHHHHHHcCchhHhhcCCCCCEEEECCC
Confidence            86555555443       3445556665653

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.56  E-value=0.074  Score=44.53  Aligned_cols=90  Identities=18%  Similarity=0.173  Sum_probs=62.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+|.|.|.|.+|...++.++..|. .|++.+++.++.+....++....        ++.+.++        ..|+|+.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l~--------~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELAA--------QSDFIVV  216 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHHh--------hCCEEEE
Confidence            46789999999999999999999999 48888877665555555554211        2222221        3689999


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++....    .+ ...+..++++..++..+..
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence            887532    12 3456778888888877643

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.55  E-value=0.052  Score=43.36  Aligned_cols=97  Identities=14%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEecCCCcccHHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ..++++.+||-.|+|. |..+..+++..+. .+++++.+++..+.+++    .+..   .++.-+.  .++.        
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~~--------  109 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM--DNLP--------  109 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCS--------
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh--hhCC--------
Confidence            3678889999999876 8888899998876 79999999988877654    3321   2222111  1110        


Q ss_pred             HhCCCccEEEEc-----cCCHHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDC-----AGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .....||+|+..     .+....+..+.+.|+|+|.++...
T Consensus       110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            123579999753     333457788889999999998875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.54  E-value=0.069  Score=47.37  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=49.4

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-------HHHHHHHcCCCEE-EecCCCcccHHHHHHHHHHH--h
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-------RLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKA--M  177 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-------~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~--~  177 (290)
                      .++||+|+ |++|...++.+...|++.++.++++..       ..+.++..|.... +..+-.+.   +.++++.+.  .
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~---~~v~~~~~~i~~  316 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADR---EALAALLAELPE  316 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHHTCCT
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCH---HHHHHHHHHHHH
Confidence            89999987 999999999888889977888777532       1223344564322 22222222   233333321  1


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      ..++|++|++.|.
T Consensus       317 ~g~ld~vVh~AGv  329 (496)
T 3mje_A          317 DAPLTAVFHSAGV  329 (496)
T ss_dssp             TSCEEEEEECCCC
T ss_pred             hCCCeEEEECCcc
Confidence            2479999999885

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.53  E-value=0.061  Score=42.49  Aligned_cols=103  Identities=18%  Similarity=0.226  Sum_probs=66.8

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC-
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG-  178 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~-  178 (290)
                      ..++.+||-.|+| .|..++.+++.++ ...+++++.+++..+.+++    .|....+.+  ...+..+.+.++.. .+ 
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~--~~~d~~~~l~~l~~-~~~  145 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISL--RLGPALATLEQLTQ-GKP  145 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEE--EESCHHHHHHHHHT-SSS
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHh-cCC
Confidence            4567899999987 5888899999874 2379999999998877754    243211111  11233333333311 12 


Q ss_pred             -CCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          179 -TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 -~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ..||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             579999854332   245778889999999998753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.51  E-value=0.049  Score=41.78  Aligned_cols=62  Identities=18%  Similarity=0.326  Sum_probs=40.5

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      ++||+|+ |.+|...++.+. .|. .|+.++++++          ....|.  .+.   +.++++.+.. +++|++|++.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~--~~~---~~~~~~~~~~-~~~d~vi~~a   66 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDI--TNI---DSIKKMYEQV-GKVDAIVSAT   66 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCT--TCH---HHHHHHHHHH-CCEEEEEECC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeec--CCH---HHHHHHHHHh-CCCCEEEECC
Confidence            7999988 999999999888 898 5777777654          111222  111   1233322212 4689999998


Q ss_pred             C
Q 022879          189 G  189 (290)
Q Consensus       189 g  189 (290)
                      |
T Consensus        67 g   67 (202)
T 3d7l_A           67 G   67 (202)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.51  E-value=0.047  Score=44.90  Aligned_cols=74  Identities=24%  Similarity=0.390  Sum_probs=46.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC------hhHHHHHHH---cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------DYRLSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~------~~~~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+|||+|+ |.+|...++.+...|.+ |++++++      +++.+.++.   .+.. ++..+-.  +. +.+.+..   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~--d~-~~l~~~~---   75 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSID--DH-ASLVEAV---   75 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTT--CH-HHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCC-EEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccC--CH-HHHHHHH---
Confidence            467999998 99999999988888984 6777665      344433333   3433 2322221  21 2333332   


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       .++|+||++++.
T Consensus        76 -~~~d~vi~~a~~   87 (308)
T 1qyc_A           76 -KNVDVVISTVGS   87 (308)
T ss_dssp             -HTCSEEEECCCG
T ss_pred             -cCCCEEEECCcc
Confidence             258999999885

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=95.51  E-value=0.11  Score=40.96  Aligned_cols=101  Identities=18%  Similarity=0.195  Sum_probs=67.4

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC--EEEecCCCcccHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD--NIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~--~~~~~~~~~~~~~~~~~~  172 (290)
                      .+...+++++.+||-.|+|. |..+..+++. +. .+++++.+++..+.+++.    +..  .++..+.  .++.     
T Consensus        13 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~-----   82 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA--ESLP-----   82 (239)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT--TBCC-----
T ss_pred             HHHHhCcCCCCEEEEEccCc-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc--ccCC-----
Confidence            34556788999999998866 7777777766 44 799999999887776542    322  2222111  1110     


Q ss_pred             HHHHhCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          173 IQKAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                         .....||+|+.....      ...+..+.+.|+++|.++....
T Consensus        83 ---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           83 ---FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             ---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ---CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence               123579999876322      3467888999999999988754

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.49  E-value=0.28  Score=41.19  Aligned_cols=131  Identities=18%  Similarity=0.268  Sum_probs=77.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|.|.|+|.+|...+..++.. +++.+.+.+.++++.+ +.+.++...++      .++.+.+      ....+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~ll------~~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAY------KDPHELI------EDPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEE------SSHHHHH------HCTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCcee------CCHHHHh------cCCCCCEEEEc
Confidence            688999999998766665544 6643445677777755 45667765443      2333322      23469999999


Q ss_pred             cCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEE-EEe-eecCCcHHHHHHHHHcCCC
Q 022879          188 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDV-VGV-FRYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       188 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i-~~~-~~~~~~l~~~~~~~~~g~~  253 (290)
                      +....+...+..++..+ +-+.+.-+.....-....   + -.+++.+ .+. ..+...++.+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAK-KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcC-CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence            99876777777777655 445554221111111111   1 1223322 222 2336778889999999887

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.49  E-value=0.079  Score=43.39  Aligned_cols=96  Identities=16%  Similarity=0.120  Sum_probs=57.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCChhHH--HHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRL--SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~--~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..+|||+|+ |.+|...++.+...| . .|+++++++++.  ..+...+... +..+-.  + .+.+.+..    .++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~-~~~D~~--d-~~~l~~~~----~~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEV-VQGDQD--D-QVIMELAL----NGAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEE-EECCTT--C-HHHHHHHH----TTCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEE-EEecCC--C-HHHHHHHH----hcCCE
Confidence            468999998 999999998887778 7 678887776553  2233344432 322221  2 12333332    35999


Q ss_pred             EEEccCCHH---------HHHHHHHHhcc--CCEEEEecc
Q 022879          184 SFDCAGLNK---------TMSTALGATCA--GGKVCLVGM  212 (290)
Q Consensus       184 vid~~g~~~---------~~~~~~~~l~~--~G~~v~~g~  212 (290)
                      ||++.+...         ....+++.++.  -++++..+.
T Consensus        76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           76 TFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             EEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             EEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            999987421         12234444433  257777553

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.49  E-value=0.11  Score=42.41  Aligned_cols=87  Identities=11%  Similarity=0.073  Sum_probs=56.8

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      +|.|.|.|.+|...++.+...|. .|.+.++++++.+.+.+.|....       .+..+.++        ..|+||-|+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~--------~advvi~~v~   66 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVCA--------ACDITIAMLA   66 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHHH--------HCSEEEECCS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHH--------cCCEEEEEcC
Confidence            68889999999988888777898 58888999998887776664321       12222221        2578888887


Q ss_pred             CHHHHHHHH-------HHhccCCEEEEecc
Q 022879          190 LNKTMSTAL-------GATCAGGKVCLVGM  212 (290)
Q Consensus       190 ~~~~~~~~~-------~~l~~~G~~v~~g~  212 (290)
                      .+..+...+       ..++++..++..+.
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st   96 (287)
T 3pdu_A           67 DPAAAREVCFGANGVLEGIGGGRGYIDMST   96 (287)
T ss_dssp             SHHHHHHHHHSTTCGGGTCCTTCEEEECSC
T ss_pred             CHHHHHHHHcCchhhhhcccCCCEEEECCC
Confidence            654444443       23445555555543

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.48  E-value=0.18  Score=42.10  Aligned_cols=129  Identities=18%  Similarity=0.204  Sum_probs=77.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|.|.|+|.+|...+..++.. +++.+.+.+.++++.+ +.+.++..  +      .++.+.+      ....+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~------~~~~~~l------~~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--V------RTIDAIE------AAADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--E------CCHHHHH------HCTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--c------CCHHHHh------cCCCCCEEEEe
Confidence            688999999998877766664 7744445677777755 44567754  1      2333322      23469999999


Q ss_pred             cCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEEEEee--ecCCcHHHHHHHHHcCCC
Q 022879          188 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDVVGVF--RYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       188 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i~~~~--~~~~~l~~~~~~~~~g~~  253 (290)
                      +....+...+..++..+ +-+.+.-+.....-....   + -.+++.+.-.+  .+...++.+.+++++|.+
T Consensus        71 tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARAG-KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHcC-CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCC
Confidence            99877777777777654 555554221111111111   1 12333332222  226678889999999887

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.48  E-value=0.073  Score=47.16  Aligned_cols=83  Identities=19%  Similarity=0.266  Sum_probs=51.4

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH----H---HHHHHcCCCE-EEecCCCcccHHHHHHHHHH
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR----L---SVAKEIGADN-IVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~----~---~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++++.++||+|+ |++|...++.+...|+++++.++++...    .   +.++..|... ++..+-.+.   +.++++.+
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~---~~v~~~~~  299 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDR---ESVRELLG  299 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCH---HHHHHHHH
Confidence            457889999987 9999999988888899768888777531    1   2234455432 222222221   22333322


Q ss_pred             H--hCCCccEEEEccCC
Q 022879          176 A--MGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~--~~~~~d~vid~~g~  190 (290)
                      .  ...++|.||++.|.
T Consensus       300 ~i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          300 GIGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             HHHhcCCCcEEEECCcc
Confidence            1  12468999999884

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.47  E-value=0.1  Score=43.49  Aligned_cols=98  Identities=17%  Similarity=0.175  Sum_probs=64.5

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-------CEEEecCCCcccHHHHHHHHHHHh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA-------DNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+.+||..|+|. |..+..+++..+...+++++-+++..+.+++. ..       ..+-.   ...|..+.+..    .
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~---~~~D~~~~l~~----~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNV---FIEDASKFLEN----V  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEE---EESCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEE---EEccHHHHHhh----c
Confidence            4568999998765 66777777776555899999999998888763 21       11111   11233332221    2


Q ss_pred             CCCccEEEEccC----------CHHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+-...          ..+.+..+.+.|+++|.++.-.
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            467999984331          0356788899999999998753

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.46  E-value=0.15  Score=44.72  Aligned_cols=95  Identities=11%  Similarity=0.068  Sum_probs=56.4

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +.+|+|.|+|.+|...++.+...|. .|+++++++++.+.+ +.++....+..+-  .++ +.+.++.    .++|+|++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv--~d~-~~l~~~l----~~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV--NDD-AALDAEV----AKHDLVIS   74 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT--TCH-HHHHHHH----TTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec--CCH-HHHHHHH----cCCcEEEE
Confidence            5689999999999999988888898 588888887776543 2333222222221  122 2233332    36999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEe
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +++..........++.++-.++..
T Consensus        75 ~a~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           75 LIPYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             CCC--CHHHHHHHHHHHTCEEEES
T ss_pred             CCccccchHHHHHHHhCCCeEEEe
Confidence            998632222233445555555543

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.44  E-value=0.15  Score=40.25  Aligned_cols=96  Identities=17%  Similarity=0.132  Sum_probs=64.6

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++++.+||=.|+|. |..+..+++. |. .+++++.+++..+.+++.  ..++.     .+..+.+..   ...+.||+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~~---~~~~~fD~  104 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLKS---LPDKYLDG  104 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHHT---SCTTCBSE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhhh---cCCCCeeE
Confidence            357889999998764 5556666665 87 589999999999888775  22222     222221111   13467999


Q ss_pred             EEEcc-----CC---HHHHHHHHHHhccCCEEEEecc
Q 022879          184 SFDCA-----GL---NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       184 vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      |+...     ..   ...+..+.+.|+|+|.++....
T Consensus       105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            98632     21   3567888999999999987643

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.42  E-value=0.13  Score=41.64  Aligned_cols=104  Identities=19%  Similarity=0.228  Sum_probs=64.0

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..++++++||=.|+|+ |..+.++++.+ +...+++++.++++.+.+++    +|...+....   .+.......+. ..
T Consensus        79 l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~---~D~~~~~~~~~-~~  153 (274)
T 3ajd_A           79 LNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN---ADMRKYKDYLL-KN  153 (274)
T ss_dssp             HCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCHHHHHHHHH-HT
T ss_pred             hCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe---CChHhcchhhh-hc
Confidence            4578899988887755 55666777765 43589999999998887644    4543222111   22222111110 12


Q ss_pred             CCCccEEEE---ccCC---------------------HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFD---CAGL---------------------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid---~~g~---------------------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||.|+-   |.|.                     ...+..+++.|+++|+++...
T Consensus       154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st  211 (274)
T 3ajd_A          154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST  211 (274)
T ss_dssp             TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            457999875   3331                     245677888999999988753

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.41  E-value=0.074  Score=41.53  Aligned_cols=103  Identities=18%  Similarity=0.218  Sum_probs=66.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCE-EEecCCCcccHHHHHHHHHHH-h
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKA-M  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~-~  177 (290)
                      ..++.+||-.|+|. |..++.+++.++ ...+++++.+++..+.+++    .+... +...   ..+..+.+..+... .
T Consensus        62 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~~~~~~~  137 (225)
T 3tr6_A           62 LMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLR---LSPAKDTLAELIHAGQ  137 (225)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHHHHTTTC
T ss_pred             hhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE---eCCHHHHHHHhhhccC
Confidence            45678999998876 778888888864 3489999999988877754    34321 1111   12333333332110 0


Q ss_pred             CCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+-....   ...+..+.+.|+++|.++.-.
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1579999854432   245778889999999998754

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.40  E-value=0.064  Score=45.00  Aligned_cols=87  Identities=22%  Similarity=0.234  Sum_probs=57.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++..|. .|++.++++++ +....+|...        .++.+.++        ..|+|+.
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~e~l~--------~aDiVil  206 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELKARY--------MDIDELLE--------KSDIVIL  206 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHTEEE--------CCHHHHHH--------HCSEEEE
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee--------cCHHHHHh--------hCCEEEE
Confidence            46789999999999999999999999 68888888766 4445555321        12222221        3688888


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEecc
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  212 (290)
                      ++....    .+ ...+..++++ .++..+.
T Consensus       207 ~vp~~~~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          207 ALPLTRDTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             CCCCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             cCCCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence            776541    12 2345667777 6666653

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.39  E-value=0.18  Score=39.07  Aligned_cols=100  Identities=13%  Similarity=0.094  Sum_probs=62.0

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ..++++++||=.|+|+ |..+..+++..+...|++++.+++..+    .++.......+.  ....+...    .. ...
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~--~d~~~~~~----~~-~~~  124 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLL--FDASKPWK----YS-GIV  124 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEEC--SCTTCGGG----TT-TTC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEE--cCCCCchh----hc-ccc
Confidence            4567899999998865 677788888775347999999987543    333332111111  11111100    00 012


Q ss_pred             CCccEEEEccCCHH----HHHHHHHHhccCCEEEEe
Q 022879          179 TGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV  210 (290)
Q Consensus       179 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  210 (290)
                      ..||+|+-....+.    .+..+.+.|+|+|+++..
T Consensus       125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            56999987654322    257788899999999877

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.38  E-value=0.029  Score=46.91  Aligned_cols=72  Identities=21%  Similarity=0.274  Sum_probs=44.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|||+|+ |.+|...++.+...|. .|+++++++.+.+.+...+.. .+..+-.  +. +.+.+..    .++|+||+++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~--d~-~~~~~~~----~~~d~vih~a   85 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPE-CRVAEML--DH-AGLERAL----RGLDGVIFSA   85 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCE-EEECCTT--CH-HHHHHHT----TTCSEEEEC-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeE-EEEecCC--CH-HHHHHHH----cCCCEEEECC
Confidence            7999998 9999999998888898 678887776554322222332 2222211  21 2333332    3699999998


Q ss_pred             CC
Q 022879          189 GL  190 (290)
Q Consensus       189 g~  190 (290)
                      +.
T Consensus        86 ~~   87 (342)
T 2x4g_A           86 GY   87 (342)
T ss_dssp             --
T ss_pred             cc
Confidence            74

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.38  E-value=0.07  Score=46.66  Aligned_cols=104  Identities=15%  Similarity=0.168  Sum_probs=68.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHH-CCCC--eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARA-FGAP--RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~-~g~~--~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .+....+|||+|+|+||+.++.++.. .+..  .++.++..+.+.+..+.+|.. +....-...++.+.+.++.  . ++
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl--~-~~   84 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTL--E-EN   84 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGC--C-TT
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHh--c-CC
Confidence            35566789999999999999987764 4552  577777776665666666643 2322222344444444432  2 23


Q ss_pred             ccEEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       181 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       |+|++++-....+..+-.++..+-.|+....
T Consensus        85 -DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           85 -DFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             -CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             -CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence             9999987654566667777888888888874

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.38  E-value=0.055  Score=45.64  Aligned_cols=91  Identities=20%  Similarity=0.277  Sum_probs=61.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+.+.++ +..+.+|...+       .++.+.++        ..|+|+-
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~-------~~l~ell~--------~aDvV~l  229 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV-------STLQDLLF--------HSDCVTL  229 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC-------SSHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCCeec-------CCHHHHHh--------cCCEEEE
Confidence            57799999999999999999999999 68888776543 23345665321       12222221        3689988


Q ss_pred             ccCCHH----HH-HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK----TM-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++....    .+ ...++.++++..++.++...
T Consensus       230 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  262 (347)
T 1mx3_A          230 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARGG  262 (347)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTT
T ss_pred             cCCCCHHHHHHhHHHHHhcCCCCCEEEECCCCh
Confidence            776421    12 35667788888888887544

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.37  E-value=0.06  Score=43.10  Aligned_cols=98  Identities=14%  Similarity=0.123  Sum_probs=63.4

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH--HhCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK--AMGT  179 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~  179 (290)
                      .++.+||=.|+|+ |..++.+++......|++++.+++..+.+++    ++...+.....   +.    .++..  ....
T Consensus        79 ~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~----~~~~~~~~~~~  150 (249)
T 3g89_A           79 QGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RA----EVLAREAGHRE  150 (249)
T ss_dssp             CSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CH----HHHTTSTTTTT
T ss_pred             CCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cH----HHhhcccccCC
Confidence            5678898888765 6667777777644489999999998887754    45432222112   21    12211  0125


Q ss_pred             CccEEEEccCC--HHHHHHHHHHhccCCEEEEec
Q 022879          180 GIDVSFDCAGL--NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       180 ~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .||+|+...-.  +..+..+.+.|+++|+++.+-
T Consensus       151 ~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          151 AYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             CEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            79999874332  345666778899999998764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.36  E-value=0.047  Score=43.60  Aligned_cols=83  Identities=16%  Similarity=0.151  Sum_probs=47.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEE-EeCChhHHH-HHH---HcCCC-EEEecCCCc-ccHHHHHHHHHHH--
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVI-VDVDDYRLS-VAK---EIGAD-NIVKVSTNL-QDIAEEVEKIQKA--  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~-v~~~~~~~~-~~~---~lg~~-~~~~~~~~~-~~~~~~~~~~~~~--  176 (290)
                      .++++||+|+ +++|.+.++.+...|++ ++. ..+++++.+ ..+   ..+.. ..+..+-.+ ++....++++.+.  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            5789999987 99999999998899995 555 455554433 222   23322 122222211 1222222222211  


Q ss_pred             ---hCCCccEEEEccCC
Q 022879          177 ---MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ---~~~~~d~vid~~g~  190 (290)
                         ...++|+++++.|.
T Consensus        85 ~~~~~~~id~lv~nAg~  101 (255)
T 3icc_A           85 NRTGSTKFDILINNAGI  101 (255)
T ss_dssp             HHHSSSCEEEEEECCCC
T ss_pred             ccccCCcccEEEECCCC
Confidence               12359999999874

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.36  E-value=0.064  Score=41.73  Aligned_cols=99  Identities=20%  Similarity=0.249  Sum_probs=66.2

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ..++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++.+.......     ++.+ +.......+..||+|
T Consensus        50 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-----~~~~-~~~~~~~~~~~fD~v  120 (227)
T 3e8s_A           50 GRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHLA-----SYAQ-LAEAKVPVGKDYDLI  120 (227)
T ss_dssp             HTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEEC-----CHHH-HHTTCSCCCCCEEEE
T ss_pred             cCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccchh-----hHHh-hcccccccCCCccEE
Confidence            45678999998765 6667777766 77 79999999999998888753333321     2111 100000123459999


Q ss_pred             EEccC-----CHHHHHHHHHHhccCCEEEEecc
Q 022879          185 FDCAG-----LNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       185 id~~g-----~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +....     ....+..+.+.|+++|.++....
T Consensus       121 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          121 CANFALLHQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             EEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence            87532     23578889999999999998654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.36  E-value=0.28  Score=41.32  Aligned_cols=98  Identities=14%  Similarity=0.122  Sum_probs=57.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH--HHHHHcCCCEEEecC-CCcccHHHHHHHHHHHhCCCccE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL--SVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~--~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +.+|||+|+ |.+|...++.+...|.+ |+++++++++.  +.+.......++..+ -.  +. +.+.+..    .++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~--d~-~~l~~~~----~~~d~   76 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIAEELQAIPNVTLFQGPLLN--NV-PLMDTLF----EGAHL   76 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHHHHHHTSTTEEEEESCCTT--CH-HHHHHHH----TTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCChhhHHHHhhcCCcEEEECCccC--CH-HHHHHHH----hcCCE
Confidence            568999998 99999999888888984 77776766543  223322212223222 11  21 2233332    35899


Q ss_pred             EEEccCCH-----HHHHHHHHHhccC---CEEEEeccC
Q 022879          184 SFDCAGLN-----KTMSTALGATCAG---GKVCLVGMG  213 (290)
Q Consensus       184 vid~~g~~-----~~~~~~~~~l~~~---G~~v~~g~~  213 (290)
                      ||.+.+..     .....+++.++..   ++++.++..
T Consensus        77 Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           77 AFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             EEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            99877642     1223444544433   588888754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.36  E-value=0.046  Score=44.05  Aligned_cols=82  Identities=18%  Similarity=0.204  Sum_probs=48.3

Q ss_pred             CCCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChhH--HHHHH----HcCCCE-EEecCC-CcccHHHHHHHHHH
Q 022879          107 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAK----EIGADN-IVKVST-NLQDIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~~--~~~~~----~lg~~~-~~~~~~-~~~~~~~~~~~~~~  175 (290)
                      .++++||+|+   +++|.+.++.+...|+ .++.+.++.++  .+.++    ..+... .+..+- ..+++.+.++++.+
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            4689999975   4999999998888899 56666555322  22222    234321 111121 22233334444433


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      . -+++|++|++.|.
T Consensus        98 ~-~g~id~li~nAg~  111 (267)
T 3gdg_A           98 D-FGQIDAFIANAGA  111 (267)
T ss_dssp             H-TSCCSEEEECCCC
T ss_pred             H-cCCCCEEEECCCc
Confidence            2 3579999999884

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.35  E-value=0.042  Score=46.61  Aligned_cols=76  Identities=20%  Similarity=0.128  Sum_probs=47.2

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ..+|||+|+ |.+|...++.+... |. .|+++++++++.+.+.....-.++..+-. .+ .+.+.+..    .++|+||
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-~d-~~~~~~~~----~~~d~Vi   96 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDIT-IN-KEWVEYHV----KKCDVIL   96 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTT-TC-HHHHHHHH----HHCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccC-CC-HHHHHHHh----ccCCEEE
Confidence            468999997 99999999988777 88 68888887765443322222223322221 01 12333332    1589999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++++.
T Consensus        97 h~A~~  101 (372)
T 3slg_A           97 PLVAI  101 (372)
T ss_dssp             ECBCC
T ss_pred             EcCcc
Confidence            98874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.34  E-value=0.11  Score=42.84  Aligned_cols=75  Identities=15%  Similarity=0.165  Sum_probs=45.5

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .++..+|||+|+ |.+|...++.+...|. .|+++++++.+ +.   ++.. .+..+-.  + .+.+.++.+  +.++|+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~-~~~~Dl~--d-~~~~~~~~~--~~~~d~   77 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVE-MISLDIM--D-SQRVKKVIS--DIKPDY   77 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEE-EEECCTT--C-HHHHHHHHH--HHCCSE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceee-EEECCCC--C-HHHHHHHHH--hcCCCE
Confidence            456678999988 9999999998888898 67778777654 21   2222 2222211  2 123333322  135899


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ||++++.
T Consensus        78 vih~A~~   84 (321)
T 2pk3_A           78 IFHLAAK   84 (321)
T ss_dssp             EEECCSC
T ss_pred             EEEcCcc
Confidence            9999875

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.34  E-value=0.19  Score=43.39  Aligned_cols=134  Identities=19%  Similarity=0.137  Sum_probs=81.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHC---------CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAF---------GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~---------g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ..=+|.|.|+|.+|..-+...+..         +++.+.+.+.++++.+ +++++|...++.      ++.+.+      
T Consensus        25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~------d~~~ll------   92 (412)
T 4gqa_A           25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG------DWRELV------   92 (412)
T ss_dssp             CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES------SHHHHH------
T ss_pred             ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC------CHHHHh------
Confidence            335789999999998766555443         4444445577777655 557788765542      443333      


Q ss_pred             hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhh----hccCcE-EEEee-ecCCcHHHHHHHHHc
Q 022879          177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA----AVREVD-VVGVF-RYKNTWPLCLELLRS  250 (290)
Q Consensus       177 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~~~~-i~~~~-~~~~~l~~~~~~~~~  250 (290)
                      ....+|+|+-|+....+...+..+|.. |+-|.+.-+.....-....+    -.+++. ..+.. .+...++.+.+++++
T Consensus        93 ~~~~vD~V~I~tp~~~H~~~~~~al~a-GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~  171 (412)
T 4gqa_A           93 NDPQVDVVDITSPNHLHYTMAMAAIAA-GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIAR  171 (412)
T ss_dssp             HCTTCCEEEECSCGGGHHHHHHHHHHT-TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEECCCcHHHHHHHHHHHHc-CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhc
Confidence            235799999999987787788888874 56666643221111111111    122222 23322 236678889999999


Q ss_pred             CCC
Q 022879          251 GKI  253 (290)
Q Consensus       251 g~~  253 (290)
                      |.+
T Consensus       172 G~i  174 (412)
T 4gqa_A          172 GDI  174 (412)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            887

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.34  E-value=0.07  Score=42.95  Aligned_cols=96  Identities=16%  Similarity=0.185  Sum_probs=65.3

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCC---CEEEecCCCcccHHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA---DNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~---~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .++++.+||-.|+|. |..+..+++.-+. .+++++.+++..+.+++    .+.   ..++..+.  .++.        .
T Consensus        43 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~--------~  110 (267)
T 3kkz_A           43 NLTEKSLIADIGCGT-GGQTMVLAGHVTG-QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM--DDLP--------F  110 (267)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHTTCSS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCC--------C
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHhccCC-EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh--hhCC--------C
Confidence            478899999999875 7788888888444 79999999998777654    332   12222111  1110        0


Q ss_pred             hCCCccEEEEcc-----CCHHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCA-----GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~-----g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....||+|+...     +....+..+.+.|+|+|.++...
T Consensus       111 ~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          111 RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            235799998633     33456778888999999998765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.33  E-value=0.064  Score=44.26  Aligned_cols=91  Identities=10%  Similarity=0.095  Sum_probs=55.9

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      .+|||+|+ |.+|...++.+...|. .|+++++++.+.+ ++  +.. ++..+   -. .+.+.+..    .++|+||++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D---l~-~~~~~~~~----~~~d~Vih~   69 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD---YT-LEDLINQL----NDVDAVVHL   69 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC---CC-HHHHHHHT----TTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc---cc-HHHHHHhh----cCCCEEEEc
Confidence            58999997 9999999999999998 6888877755544 33  332 22222   22 34454442    379999999


Q ss_pred             cCCH-------------HHHHHHHHHhccC--CEEEEecc
Q 022879          188 AGLN-------------KTMSTALGATCAG--GKVCLVGM  212 (290)
Q Consensus       188 ~g~~-------------~~~~~~~~~l~~~--G~~v~~g~  212 (290)
                      ++..             .....+++.+...  .+++.++.
T Consensus        70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           70 AATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            8742             1123444544433  46887763

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.33  E-value=0.22  Score=42.36  Aligned_cols=133  Identities=15%  Similarity=0.071  Sum_probs=78.5

Q ss_pred             CCeEEEECCCHHHHHHHHHHHH--------CCCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARA--------FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~--------~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      .=+|.|.|+|.+|..-+...+.        -+++.+.+.+.++++.+ +++++|...++.      ++.+.+      ..
T Consensus        25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~ell------~~   92 (393)
T 4fb5_A           25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA------DWRALI------AD   92 (393)
T ss_dssp             CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES------CHHHHH------HC
T ss_pred             CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC------CHHHHh------cC
Confidence            3589999999999754433222        25544445566666654 567788765542      343333      23


Q ss_pred             CCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEE-EEee-ecCCcHHHHHHHHHcCC
Q 022879          179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDV-VGVF-RYKNTWPLCLELLRSGK  252 (290)
Q Consensus       179 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i-~~~~-~~~~~l~~~~~~~~~g~  252 (290)
                      ..+|+|+-|+....+...+..+|. .|+-|.+.-+.....-....   + -.+++.+ .+.. .+...++.+.+++++|.
T Consensus        93 ~~iDaV~IatP~~~H~~~a~~al~-aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~  171 (393)
T 4fb5_A           93 PEVDVVSVTTPNQFHAEMAIAALE-AGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGV  171 (393)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHH-TTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTT
T ss_pred             CCCcEEEECCChHHHHHHHHHHHh-cCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCC
Confidence            579999999998777778877877 47777775322111111111   1 1223322 2222 22667889999999988


Q ss_pred             C
Q 022879          253 I  253 (290)
Q Consensus       253 ~  253 (290)
                      +
T Consensus       172 i  172 (393)
T 4fb5_A          172 I  172 (393)
T ss_dssp             T
T ss_pred             C
Confidence            7

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.31  E-value=0.017  Score=47.51  Aligned_cols=44  Identities=27%  Similarity=0.396  Sum_probs=36.8

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      .++.+||=.|+|. |..++.+++..+...+++++.++...+.+++
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~   88 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQ   88 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            4678999998865 7888899998866689999999998887765

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=95.30  E-value=0.12  Score=40.87  Aligned_cols=100  Identities=16%  Similarity=0.077  Sum_probs=59.0

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCChhHHH----HHHHcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g-~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+++|++||=.|+|+ |..+..+++..| -..|++++.++...+    .++....-..+.-+........       ..
T Consensus        72 ~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~-------~~  143 (232)
T 3id6_C           72 NPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYK-------SV  143 (232)
T ss_dssp             CSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTT-------TT
T ss_pred             cCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhh-------cc
Confidence            5689999999998865 556777777665 337999999997743    2233221122221111111000       01


Q ss_pred             CCCccEEEEccCCHH---HHHH-HHHHhccCCEEEEe
Q 022879          178 GTGIDVSFDCAGLNK---TMST-ALGATCAGGKVCLV  210 (290)
Q Consensus       178 ~~~~d~vid~~g~~~---~~~~-~~~~l~~~G~~v~~  210 (290)
                      ...||+|+-....+.   .+.. +.+.|+++|+++..
T Consensus       144 ~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          144 VENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            247999987655432   2222 33489999999876

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.29  E-value=0.29  Score=40.06  Aligned_cols=88  Identities=15%  Similarity=0.197  Sum_probs=58.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      .+|.|.|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .++.+.++        ..|+||-|+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~--------~~D~vi~~v   68 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---C----ENNQKVAA--------ASDIIFTSL   68 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---C----SSHHHHHH--------HCSEEEECC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh--------CCCEEEEEC
Confidence            479999999999998888888898 6888889888877766655321   1    12222221        368888888


Q ss_pred             CCHHHHHHHH-------HHhccCCEEEEecc
Q 022879          189 GLNKTMSTAL-------GATCAGGKVCLVGM  212 (290)
Q Consensus       189 g~~~~~~~~~-------~~l~~~G~~v~~g~  212 (290)
                      ..+..+...+       ..++++..++.+..
T Consensus        69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~   99 (301)
T 3cky_A           69 PNAGIVETVMNGPGGVLSACKAGTVIVDMSS   99 (301)
T ss_dssp             SSHHHHHHHHHSTTCHHHHSCTTCEEEECCC
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEECCC
Confidence            7554444444       34555666666543

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.28  E-value=0.15  Score=42.91  Aligned_cols=131  Identities=18%  Similarity=0.106  Sum_probs=77.5

Q ss_pred             CeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      -+|.|.|+|.+|...+..++.. +++.+.+.+.++++.+ +.+.+|. ..+      .++.+.+      ....+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~------~~~~~~l------~~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAV------ASPDEVF------ARDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEE------SSHHHHT------TCSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-cee------CCHHHHh------cCCCCCEEEE
Confidence            3789999999998887776665 6644445677777755 4566773 222      2332222      2347999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEEE-Ee-eecCCcHHHHHHHHHcCCC
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDVV-GV-FRYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i~-~~-~~~~~~l~~~~~~~~~g~~  253 (290)
                      |+....+...+..++..+ +-+.+.-+.....-....   + -.+++.+. +. ..+...++.+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERG-IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHcC-CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            999877777777777655 445553221111111111   1 12222222 22 2226678889999999887

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.28  E-value=0.2  Score=40.57  Aligned_cols=86  Identities=17%  Similarity=0.167  Sum_probs=57.1

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      +|.|.|+|.+|.+.+..+...|. .|++.++++++.+.+.+.|......  .   ++    .+    . .+.|+||-|+.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~--~---~~----~~----~-~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAG--Q---DL----SL----L-QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEE--S---CG----GG----G-TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCcccc--C---CH----HH----h-CCCCEEEEECC
Confidence            68899999999999998888898 6888899998888777777531111  1   11    00    1 35789999988


Q ss_pred             CHHHHHHHHHH----hccCCEEEEec
Q 022879          190 LNKTMSTALGA----TCAGGKVCLVG  211 (290)
Q Consensus       190 ~~~~~~~~~~~----l~~~G~~v~~g  211 (290)
                      . ......+..    ++++..++.++
T Consensus        67 ~-~~~~~~~~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           67 I-QLILPTLEKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             H-HHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             H-HHHHHHHHHHHhhCCCCCEEEECC
Confidence            5 333444333    34455555553

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.28  E-value=0.18  Score=40.60  Aligned_cols=98  Identities=19%  Similarity=0.226  Sum_probs=64.1

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHC---CCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAF---GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      -++++.+||=.|+|. |..+..+++..   |+ .+++++.+++..+.+++    .+...-+.+..  .+.    .++   
T Consensus        67 ~~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~--~D~----~~~---  135 (261)
T 4gek_A           67 FVQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GDI----RDI---  135 (261)
T ss_dssp             HCCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCT----TTC---
T ss_pred             hCCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEee--ccc----ccc---
Confidence            378999999999865 77778888865   55 69999999998887754    33221111100  111    011   


Q ss_pred             hCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEecc
Q 022879          177 MGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       177 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....+|+|+-...-        ...+..+.+.|+|+|.++....
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            22458888764321        1357789999999999987653

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.25  E-value=0.11  Score=43.88  Aligned_cols=131  Identities=11%  Similarity=0.023  Sum_probs=79.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      -+|.|.|+|.+|...+..++.. +++.+.+.+.++++.+ +.+.+|...   +    .++.+.+      ....+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~~l------~~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATMEALL------AREDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHHHHH------HCSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHHHHh------cCCCCCEEEE
Confidence            4789999999998877777665 7744445577777765 446677542   1    2333332      2357999999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh----hhccCcEE-EEe-eecCCcHHHHHHHHHcCCC
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGV-FRYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~-~~~~~~l~~~~~~~~~g~~  253 (290)
                      |+....+...+..++..+ +-+.+.-+.....-....    +-.+++.+ .+. ..+...++.+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~g-k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSG-KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHcC-CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            999877777777777754 445553221111111111    11223322 222 2236778889999999887

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=95.24  E-value=0.047  Score=43.98  Aligned_cols=94  Identities=15%  Similarity=0.148  Sum_probs=62.8

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ..+.+||=.|+|. |..+..+++. |. .|++++.+++..+.+++...-..+.-+.  +++        ....+.||+|+
T Consensus        38 ~~~~~vLDvGcGt-G~~~~~l~~~-~~-~v~gvD~s~~ml~~a~~~~~v~~~~~~~--e~~--------~~~~~sfD~v~  104 (257)
T 4hg2_A           38 PARGDALDCGCGS-GQASLGLAEF-FE-RVHAVDPGEAQIRQALRHPRVTYAVAPA--EDT--------GLPPASVDVAI  104 (257)
T ss_dssp             SCSSEEEEESCTT-TTTHHHHHTT-CS-EEEEEESCHHHHHTCCCCTTEEEEECCT--TCC--------CCCSSCEEEEE
T ss_pred             CCCCCEEEEcCCC-CHHHHHHHHh-CC-EEEEEeCcHHhhhhhhhcCCceeehhhh--hhh--------cccCCcccEEE
Confidence            3456888888875 7777777765 56 7999999998887665543222222111  111        01245799998


Q ss_pred             EccCC-----HHHHHHHHHHhccCCEEEEecc
Q 022879          186 DCAGL-----NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       186 d~~g~-----~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .+..-     +..+..+.+.|+|+|.++.+..
T Consensus       105 ~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~  136 (257)
T 4hg2_A          105 AAQAMHWFDLDRFWAELRRVARPGAVFAAVTY  136 (257)
T ss_dssp             ECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence            75432     4578889999999999988764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.23  E-value=0.059  Score=45.19  Aligned_cols=70  Identities=19%  Similarity=0.287  Sum_probs=43.9

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .++.+|||+|+ |.+|...++.+...|.+ |+++++++.+      .+... +..+-.  +. +.+.+..    .++|+|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~------~~~~~-~~~Dl~--d~-~~~~~~~----~~~d~v   81 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRT-VRGFDLRPSG------TGGEE-VVGSLE--DG-QALSDAI----MGVSAV   81 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCC-EEEEESSCCS------SCCSE-EESCTT--CH-HHHHHHH----TTCSEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCCCCC------CCccE-EecCcC--CH-HHHHHHH----hCCCEE
Confidence            46678999998 99999999999999994 7777776654      22322 222211  21 2233332    379999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      |++.+.
T Consensus        82 ih~A~~   87 (347)
T 4id9_A           82 LHLGAF   87 (347)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998864

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.23  E-value=0.12  Score=42.93  Aligned_cols=98  Identities=21%  Similarity=0.184  Sum_probs=63.6

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-C--------CCEEEecCCCcccHHHHHHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-G--------ADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g--------~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ..+.+||+.|+|. |..+..+++..+...+++++.+++-.+.+++. .        ...+-..   ..|..+.+.    .
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~---~~D~~~~l~----~  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV---IDDARAYLE----R  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE---ESCHHHHHH----H
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEE---EchHHHHHH----h
Confidence            5668999998765 66777777766555899999999888877652 1        1111111   123322222    1


Q ss_pred             hCCCccEEEEccC-------------CHHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCAG-------------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~g-------------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....||+|+-...             ..+.+..+.+.|+++|.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence            3567999975331             1356788899999999998763

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.22  E-value=0.11  Score=43.62  Aligned_cols=89  Identities=17%  Similarity=0.162  Sum_probs=61.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++.++.  ++.+ ..    +.   .++.+.++        ..|+|+.
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~~---~~l~ell~--------~aDvV~l  205 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----YV---DSLDDLYK--------QADVISL  205 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----BC---SCHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----ec---CCHHHHHh--------hCCEEEE
Confidence            46799999999999999999999999 688888877654  2332 22    11   12322221        3799999


Q ss_pred             ccCCHHH----H-HHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKT----M-STALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++.....    + ...+..+++++.++.++...
T Consensus       206 ~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~  238 (333)
T 1j4a_A          206 HVPDVPANVHMINDESIAKMKQDVVIVNVSRGP  238 (333)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             cCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence            8875321    1 34668899999999887643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.21  E-value=0.3  Score=41.32  Aligned_cols=45  Identities=18%  Similarity=0.269  Sum_probs=38.0

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      ..+|.|.|.|.+|...+..+...|. .|.+.++++++.+.+.+.|.
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~   66 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGI   66 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCC
Confidence            4689999999999999998888898 68899999998887766553

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=95.21  E-value=0.17  Score=39.88  Aligned_cols=95  Identities=20%  Similarity=0.289  Sum_probs=64.6

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC---CEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +.++.+||-.|+|. |..+..+++. |. .+++++.+++..+.++....   ..++..+.  .++        ......|
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~--~~~--------~~~~~~f  117 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDL--SSL--------PFENEQF  117 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBT--TBC--------SSCTTCE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcch--hcC--------CCCCCCc
Confidence            56888999998765 6677777776 77 79999999999998877531   11222111  111        0124579


Q ss_pred             cEEEEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          182 DVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       182 d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      |+|+....-      ...+..+.+.|+++|.++....
T Consensus       118 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  154 (242)
T 3l8d_A          118 EAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL  154 (242)
T ss_dssp             EEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence            999874322      2467889999999999987753

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.20  E-value=0.28  Score=36.85  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=62.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.+++..+.++... ...++..+.....          .....+|+
T Consensus        44 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~----------~~~~~~D~  110 (195)
T 3cgg_A           44 APRGAKILDAGCGQ-GRIGGYLSKQ-GH-DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ----------ISETDFDL  110 (195)
T ss_dssp             SCTTCEEEEETCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC----------CCCCCEEE
T ss_pred             ccCCCeEEEECCCC-CHHHHHHHHC-CC-cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC----------CCCCceeE
Confidence            57888999998864 6677777776 76 7999999999888887643 2233322211101          12357999


Q ss_pred             EEEccCC---------HHHHHHHHHHhccCCEEEEec
Q 022879          184 SFDCAGL---------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       184 vid~~g~---------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |+.....         ...+..+.+.|+++|.++..-
T Consensus       111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~  147 (195)
T 3cgg_A          111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF  147 (195)
T ss_dssp             EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            9875110         245677888999999988753

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.20  E-value=0.064  Score=44.53  Aligned_cols=95  Identities=14%  Similarity=0.118  Sum_probs=62.6

Q ss_pred             CeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHH-cCC---CEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKE-IGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~-lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+||+.|+|. |..+..+++.. +. .+++++-+++-.+.+++ ++.   ..+-.+   ..|..+.+++   .....||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~---~~Da~~~l~~---~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIR---VDDARMVAES---FTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEE---ESCHHHHHHT---CCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEE---ECcHHHHHhh---ccCCCCCE
Confidence            3999998865 67778888865 66 79999999999998876 331   111111   1232222221   12467999


Q ss_pred             EEEccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          184 SFDCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       184 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ||-....          .+.+..+.+.|+++|.++.-.
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            9764311          356788999999999988654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.19  E-value=0.29  Score=39.89  Aligned_cols=41  Identities=27%  Similarity=0.433  Sum_probs=35.3

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      .+|.|.|+|.+|...++.+...|. .|+..+.++++.+.+.+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999999999999999 68889999988765543

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=95.18  E-value=0.2  Score=38.75  Aligned_cols=98  Identities=16%  Similarity=0.122  Sum_probs=63.0

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .++.+||-.|+|. |..++.+++......+++++.+++..+.+++    .+...+........++.+.      .....+
T Consensus        40 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~~  112 (214)
T 1yzh_A           40 NDNPIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY------FEDGEI  112 (214)
T ss_dssp             SCCCEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT------SCTTCC
T ss_pred             CCCCeEEEEccCc-CHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh------cCCCCC
Confidence            4677888888865 7778888888743379999999988777654    3322211111211221110      123469


Q ss_pred             cEEEEccCC--------------HHHHHHHHHHhccCCEEEEe
Q 022879          182 DVSFDCAGL--------------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       182 d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      |+|+-....              ...+..+.+.|+++|.++..
T Consensus       113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  155 (214)
T 1yzh_A          113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  155 (214)
T ss_dssp             SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence            998766543              25788889999999998765

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.18  E-value=0.039  Score=44.33  Aligned_cols=91  Identities=18%  Similarity=0.160  Sum_probs=57.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .+ +++|.|+|++|.+++..+...|++.+.+++++.++.+.+. .++   ...+    ++..+.+        ...|+||
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~---~~~~----~~~~~~~--------~~aDiVI  171 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK---IFSL----DQLDEVV--------KKAKSLF  171 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE---EEEG----GGHHHHH--------HTCSEEE
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc---cCCH----HHHHhhh--------cCCCEEE
Confidence            45 9999999999999999899999977888889887755332 222   1111    1222111        2589999


Q ss_pred             EccCCHH---HHHHHHHHhccCCEEEEeccC
Q 022879          186 DCAGLNK---TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~---~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +|++..-   ........++++..++.+-..
T Consensus       172 natp~gm~p~~~~i~~~~l~~~~~V~Divy~  202 (253)
T 3u62_A          172 NTTSVGMKGEELPVSDDSLKNLSLVYDVIYF  202 (253)
T ss_dssp             ECSSTTTTSCCCSCCHHHHTTCSEEEECSSS
T ss_pred             ECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC
Confidence            9886310   000012346666677766544

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.17  E-value=0.15  Score=40.59  Aligned_cols=101  Identities=20%  Similarity=0.153  Sum_probs=68.1

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcC-CCEEEecCCCcccHHHHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ..+......++.+||-.|+|. |..+..+++.. +. .+++++.+++..+.++... ...++..+.  .++.        
T Consensus        24 ~l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~--~~~~--------   91 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL--ATWK--------   91 (259)
T ss_dssp             HHHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT--TTCC--------
T ss_pred             HHHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh--hhcC--------
Confidence            344445677889999998864 77777888776 55 6999999999988887642 222222111  1110        


Q ss_pred             HhCCCccEEEEccC------CHHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ....||+|+....      ....+..+.+.|+++|.++...
T Consensus        92 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 -PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             -CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             -ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence             1356999987542      1345677888999999998764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.17  E-value=0.054  Score=44.90  Aligned_cols=92  Identities=16%  Similarity=0.272  Sum_probs=54.2

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh------hHHHHHH---HcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD------YRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~------~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+|||+|+ |.+|...++.+...|.+ |+++++++      ++.+.++   ..+.. ++..+-.  +. +.+.+..   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~--d~-~~l~~a~---   75 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHP-TFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEME--EH-EKMVSVL---   75 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTT--CH-HHHHHHH---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCc-EEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCC--CH-HHHHHHH---
Confidence            357999998 99999999988888985 66666664      3433332   23433 3322222  21 2343332   


Q ss_pred             CCCccEEEEccCCH--HHHHHHHHHhccC---CEEE
Q 022879          178 GTGIDVSFDCAGLN--KTMSTALGATCAG---GKVC  208 (290)
Q Consensus       178 ~~~~d~vid~~g~~--~~~~~~~~~l~~~---G~~v  208 (290)
                       .++|+||++++..  .....+++.+...   .+++
T Consensus        76 -~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           76 -KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             -TTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             -cCCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence             3599999998852  1223444544433   4666

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.16  E-value=0.041  Score=45.58  Aligned_cols=91  Identities=20%  Similarity=0.313  Sum_probs=54.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHH---HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVA---KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~---~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+|||+|+ |.+|...++.+...|.+ |+++++++. +.+.+   ...+.. ++..+-.  +. +.+.+..    .++|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~l~~~~v~-~v~~Dl~--d~-~~l~~a~----~~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHP-TYVFTRPNSSKTTLLDEFQSLGAI-IVKGELD--EH-EKLVELM----KKVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECTTCSCHHHHHHHHHTTCE-EEECCTT--CH-HHHHHHH----TTCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCc-EEEEECCCCchhhHHHHhhcCCCE-EEEecCC--CH-HHHHHHH----cCCCE
Confidence            47999998 99999999988888984 667767653 43333   234443 3322221  21 2343332    36999


Q ss_pred             EEEccCCHH--HHHHHHHHhccC---CEEE
Q 022879          184 SFDCAGLNK--TMSTALGATCAG---GKVC  208 (290)
Q Consensus       184 vid~~g~~~--~~~~~~~~l~~~---G~~v  208 (290)
                      ||++++...  ....+++.++..   .+++
T Consensus        83 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           83 VISALAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             EEECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             EEECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            999987421  223444444332   4665

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.16  E-value=0.013  Score=46.55  Aligned_cols=98  Identities=19%  Similarity=0.226  Sum_probs=55.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      +.++||+|+ |.+|...++.+...|.. .|+++++++++.+....-+. ..+..+-.+.+   .+.++    -.++|++|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~d~~---~~~~~----~~~~d~vi   89 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDFEKLD---DYASA----FQGHDVGF   89 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCGGGGG---GGGGG----GSSCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc-eEEecCcCCHH---HHHHH----hcCCCEEE
Confidence            578999987 99999999988888872 36677676544321111111 12221111111   12221    13699999


Q ss_pred             EccCCHH--------------HHHHHHHHhcc--CCEEEEeccC
Q 022879          186 DCAGLNK--------------TMSTALGATCA--GGKVCLVGMG  213 (290)
Q Consensus       186 d~~g~~~--------------~~~~~~~~l~~--~G~~v~~g~~  213 (290)
                      +++|...              ....+++.+.+  .++++.++..
T Consensus        90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~  133 (242)
T 2bka_A           90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK  133 (242)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             ECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC
Confidence            9998632              11223444433  3689888753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	290
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	9e-36
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	3e-31
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	3e-20
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-16
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-15
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	2e-14
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	2e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	4e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-13
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-13
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	7e-13
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-12
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-12
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	3e-12
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	4e-12
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-11
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-11
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-11
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-11
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	8e-11
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-10
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-10
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-10
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-10
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-10
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-10
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-08
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-08
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	2e-08
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	6e-08
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	4e-06
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	2e-05
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	2e-05
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	4e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	5e-05
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-04
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	0.001
d1u2za_	406	c.66.1.31 (A:) Catalytic, N-terminal domain of his	0.002
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	0.003

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (311), Expect = 9e-36
 Identities = 78/173 (45%), Positives = 112/173 (64%), Gaps = 2/173 (1%)

Query: 82  VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141
           V+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 142 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT 201
             RLS AKEIGAD ++++S           + Q  +G   +V+ +C G   ++   + AT
Sbjct: 61  ATRLSKAKEIGADLVLQISKESPQEIARKVEGQ--LGCKPEVTIECTGAEASIQAGIYAT 118

Query: 202 CAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKID 254
            +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+ + +L S  ++
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN 171

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  112 bits (281), Expect = 3e-31
 Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 1/171 (0%)

Query: 82  VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 141
           VSLEEGA+ EPLSVGVHACRRA +   T VL++GAGPIGLV++LAA+A+GA  +      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTAR-S 59

Query: 142 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT 201
             RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V+ DC+G  K ++  +  T
Sbjct: 60  PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINIT 119

Query: 202 CAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGK 252
             GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P+ LE++ SG+
Sbjct: 120 RTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 3e-20
 Identities = 52/120 (43%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
            G+L     H A  C+KLPDNV         PL   + A      G    +++    P  
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-KCDPSD 182

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 74.5 bits (182), Expect = 1e-16
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 12/133 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GHE  GV+E +G+ V  + PGD+V       C  C  CK    N C +    A   +
Sbjct: 63  VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 122

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV------------HACRRANIGPE 108
              + ++        + L    +  E  +   ++V                     I   
Sbjct: 123 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKA 182

Query: 109 TNVLIMGAGPIGL 121
             +L  G G   +
Sbjct: 183 FELLSSGQGVRSI 195

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 71.8 bits (175), Expect = 1e-15
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 16/144 (11%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------- 53
           +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +        
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 54  --FFATPPVHGSLANQVVHPAD--LCFKLPDNVS-LEEGAMCEPLSVGVHACRRANIGPE 108
             +       G  A  V+ P       KLPD    +E+  + E + V V +   A  G  
Sbjct: 122 YGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYG 181

Query: 109 TNVLIMGAGPIGLVTMLAARAFGA 132
                  AG      +   + F A
Sbjct: 182 ----EFDAGVPKKFVIDPHKTFSA 201

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 67.7 bits (164), Expect = 2e-14
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPP 59
           ++ GHE  G++E+VG  V  L  GDRV +    S    CD+C  G+  LC   K      
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYS 115

Query: 60  VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 115
           V G  A      AD   K+PDN  +E     E ++       +  I     VL + 
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 68.3 bits (166), Expect = 2e-14
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 19/155 (12%)

Query: 88  AMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 147
            + + L  G H    A +GP + V + GAGP+GL    +AR  GA  +++ D++  RL+ 
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 65

Query: 148 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---------------NK 192
           AK  G +      +    + E++  +       +D + D  G                  
Sbjct: 66  AKAQGFEIA--DLSLDTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 193 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR 227
            +++ +  T   GK+ + G+   E    +  AA  
Sbjct: 122 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI 156

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 66.8 bits (162), Expect = 4e-14
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 16/173 (9%)

Query: 91  EPLSVGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL 145
            PL  G+            + P ++ +  GAG +GL  +LAA+  GA  I+ VD+ + RL
Sbjct: 7   GPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL 66

Query: 146 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG 205
            +AK++GA +++   T      + V  I++    G++ + +  G  + +   + A    G
Sbjct: 67  ELAKQLGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 206 KVCLVGMGH--HEMTVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 252
           K+ +VG           +    +    ++GV       K   P  + L + GK
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 65.8 bits (159), Expect = 1e-13
 Identities = 55/117 (47%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           MVIGHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP 
Sbjct: 59  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 118

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA 116
            G+LA   VH AD C KLPDN ++++       L   V A   A    +  + +M +
Sbjct: 119 DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 5/145 (3%)

Query: 82  VSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 140
           + LE   M  + ++ G H    A+I   ++V+++G G +GL+ +  A+  GA RI+ V  
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 141 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 200
               +  AK  GA +I     N ++   E + ++   G G+D      G ++T+S A+  
Sbjct: 61  RPICVEAAKFYGATDI----LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 201 TCAGGKVCLVGMGHHEMTVPLTPAA 225
              GG +  +        + +    
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVE 141

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 63.4 bits (153), Expect = 7e-13
 Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 4/116 (3%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCW-RCDHCKGGRYNLCPEMKFFATPP 59
            + GHE  G +  VGS V  +  GDRV +    +    C+HC  G   LC   +      
Sbjct: 62  FIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-GYS 120

Query: 60  VHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLIM 114
           V+G  A  V+   +    LP NV         + ++  +   R   I     VL M
Sbjct: 121 VNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 63.0 bits (152), Expect = 2e-12
 Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 22/136 (16%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +V+GHE AG++E VG  V    PG++V       C  C  C+  + N C +     +P V
Sbjct: 64  VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDV 123

Query: 61  H--------------------GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHA 99
                                 + +   V       K+  +V L+E      PL     A
Sbjct: 124 MSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDA 183

Query: 100 C-RRANIGPETNVLIM 114
                +      VL +
Sbjct: 184 IDLMKHGKCIRTVLSL 199

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.6 bits (151), Expect = 2e-12
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDR-----VALEPGISCWRCDHCK-GGRYNLCPEMKF 54
           +++GHE AG + +V  E + L          +    GI+C  C  CK      LCP  K 
Sbjct: 60  IILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV 119

Query: 55  F-------ATPPVHGSLANQ-VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 106
           +         P + G  ++  V+ P     K+ + ++        PL     A       
Sbjct: 120 YGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESR 174

Query: 107 PETNVLI 113
               V++
Sbjct: 175 EALKVIL 181

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 61.9 bits (149), Expect = 3e-12
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           + +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++      
Sbjct: 64  VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122

Query: 61  HGSLANQVVHPA-DLCFKLPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
            G+ A  V+ P     +KL     +    M  E  +  +             VLI
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ-VLI 176

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.8 bits (149), Expect = 4e-12
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 1   MVIGHECAGVIEKVGSEVKTLV-PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATP 58
           +V+GHE  G + K+G +  + +  G RV +     SC  CD CK      C +     + 
Sbjct: 64  LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123

Query: 59  PV------HGSLANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGVHACRRANIGPETNV 111
           P        G  AN V         +P+N+ +E   + E  +        + ++     +
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTL 183

Query: 112 LIMGAG 117
           +     
Sbjct: 184 VGYDKE 189

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 27/123 (21%), Positives = 41/123 (33%), Gaps = 27/123 (21%)

Query: 5   HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV---- 60
           HECAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +    
Sbjct: 67  HECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQEL 126

Query: 61  --------------------HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC 100
                                 S +   V       ++ D   L+        ++   + 
Sbjct: 127 MEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESI 183

Query: 101 RRA 103
             A
Sbjct: 184 NDA 186

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 59.7 bits (143), Expect = 2e-11
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 3/114 (2%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
             +GHE  G IE+V   V+ L  GD V L P ++   C  C+ G    C  ++F      
Sbjct: 59  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 118

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLI 113
            G  A  +        KLP +V +E      + ++  +    +  +     VLI
Sbjct: 119 GGF-AEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA-VLI 170

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 10/114 (8%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPP 59
            V GHE  G +  VG +V+   PGD V +   +   + C+ C+ G  N C  M      P
Sbjct: 56  CVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSP 115

Query: 60  -------VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 106
                    G  + Q+V       ++       E    + ++       R ++ 
Sbjct: 116 TPDEPGHTLGGYSQQIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 58.8 bits (141), Expect = 3e-11
 Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160
           + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V   
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV--- 78

Query: 161 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV 219
            N QD  + ++++   M   G+D SF+  G   TM TAL        V ++     +   
Sbjct: 79  -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 137

Query: 220 PLTPAA--VREVDVVGV----FRYKNTWPLCLELLRSGK 252
                   +      G     F+ K++ P  +    + K
Sbjct: 138 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 57.6 bits (138), Expect = 8e-11
 Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +G   ++  +A GA RI+ V     +   A E+GA   + 
Sbjct: 19  AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL- 77

Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHE 216
              N +D  + + ++       G+D + +CAG  +TM  AL +T    G   ++G+    
Sbjct: 78  ---NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 134

Query: 217 MTVPLTPAA-VREVDVVGVF---RYKNTWPLCLELLRSGK 252
             +PL P   +    + G              ++     K
Sbjct: 135 ERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 1e-10
 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 23/123 (18%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           +++GH  AG++E VG  V  L  GD V       C  C  C   + NLC +++      +
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121

Query: 61  H--------------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC 100
                                 + +   V       K+   + ++E       ++     
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEI 178

Query: 101 RRA 103
            +A
Sbjct: 179 NKA 181

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.3 bits (137), Expect = 1e-10
 Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 5/183 (2%)

Query: 80  DNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
           D++ +   AMC   +                V+I GAGP+GL  ++ AR+ GA  ++++ 
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60

Query: 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 199
               RL +A+EIGAD  +       +   +   +    G G D   +  G ++ +     
Sbjct: 61  GSPNRLKLAEEIGADLTLNRRETSVEERRK-AIMDITHGRGADFILEATGDSRALLEGSE 119

Query: 200 ATCAGGKVCLVGMGHHEMTVPLTPAA---VREVDVVGVFRY-KNTWPLCLELLRSGKIDV 255
               GG   + G+   +  VP        ++     G++    + +   + +       +
Sbjct: 120 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL 179

Query: 256 KPL 258
             L
Sbjct: 180 SKL 182

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 56.9 bits (136), Expect = 1e-10
 Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 7/158 (4%)

Query: 99  ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
           A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +GA + + 
Sbjct: 20  AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN 79

Query: 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 218
                + + + + ++      G+D S DCAG  +T+  A+  T  G   C V     +  
Sbjct: 80  PRELDKPVQDVITELTAG---GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 136

Query: 219 VPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 252
              T   +    + G F    +  ++ P  +   ++ K
Sbjct: 137 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 56.6 bits (135), Expect = 2e-10
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 8/157 (5%)

Query: 101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 160
             A + P +   + G G +GL  ++   + GA RI+ VD++  +   AK  GA + V  +
Sbjct: 22  NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81

Query: 161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHHEMTV 219
            + + I    + + K    G+D S +C G    M  AL +   G  V  LVG        
Sbjct: 82  DHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 138

Query: 220 PLTPAAVREVDVVGV----FRYKNTWPLCLELLRSGK 252
                 +      G     F+ K+  P  ++     K
Sbjct: 139 TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 2e-10
 Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 17/180 (9%)

Query: 84  LEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV 138
           L++      L  G+      A   A + P +   + G G +GL  ++  +  GA RI+ V
Sbjct: 3   LDKVC---LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV 59

Query: 139 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 198
           D++  + + AKE GA   +      + I    E + +    G+D SF+C G  K M  AL
Sbjct: 60  DINKDKFARAKEFGATECINPQDFSKPI---QEVLIEMTDGGVDYSFECIGNVKVMRAAL 116

Query: 199 GATCAG-GKVCLVGMGHHEMTVPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGK 252
            A   G G   +VG+      +   P   V      G      +   + P  +    S K
Sbjct: 117 EACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.1 bits (134), Expect = 3e-10
 Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 13/178 (7%)

Query: 82  VSLEEGAMCEPLSVGV----HACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRI 135
           +S E+     PL+        A ++A   + P   V I+G G +G + +   +      +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 136 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS 195
           + +DV + +L +A+ +GAD++V    +          ++   G G++V+ D  G   T+ 
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQ-----VMELTRGRGVNVAMDFVGSQATVD 115

Query: 196 TALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 252
                    G++ +VG    E+  P       EV   G            + L   GK
Sbjct: 116 YTPYLLGRMGRLIIVGY-GGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 5e-10
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 8/147 (5%)

Query: 93  LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 151
            S G  A  +   + P +  ++ G G +GL  ++  ++ GA RI+ +D++  +   A  +
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73

Query: 152 GADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKTMSTALGATCAGGKVC-L 209
           GA   +    + +D  + + ++   M    +  +F+  G  +TM  AL +         +
Sbjct: 74  GATECI----SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVV 129

Query: 210 VGMGHHEMTVPLTP-AAVREVDVVGVF 235
           VG+      +   P          G  
Sbjct: 130 VGVPPSAKMLTYDPMLLFTGRTWKGCV 156

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 28/136 (20%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
           ++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C +         
Sbjct: 63  VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGT 122

Query: 61  H--------------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC 100
                                 + +   V       K+    +L      +PL   V   
Sbjct: 123 MQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPF 176

Query: 101 RRANIGPETNVLIMGA 116
            +  I    ++L  G 
Sbjct: 177 EK--INEGFDLLRSGE 190

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 51.1 bits (121), Expect = 2e-08
 Identities = 31/131 (23%), Positives = 45/131 (34%), Gaps = 13/131 (9%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATP 58
           M++GHE  G + +VGSEVK   PGDRV +      WR    + G       M      + 
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114

Query: 59  PVHGSLANQVVHPA--DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 116
              G                 LP +V L +      +  G      A       +L+M  
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLLMKD 165

Query: 117 GPIGLVTMLAA 127
            P  L+  +  
Sbjct: 166 KPKDLIKAVVI 176

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 50.5 bits (119), Expect = 2e-08
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 11/174 (6%)

Query: 83  SLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 140
           S EE A   C  ++    A +     P   V I G G +G V +  A+A G   +V VD+
Sbjct: 2   SFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDI 59

Query: 141 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 200
            D +L +AKE+GAD +V              K  K    G+  +   A       +A  +
Sbjct: 60  GDEKLELAKELGADLVVNPLKEDAA------KFMKEKVGGVHAAVVTAVSKPAFQSAYNS 113

Query: 201 TCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF-RYKNTWPLCLELLRSGKI 253
              GG   LVG+   EM +P+    +  + ++G     +      L+    GK+
Sbjct: 114 IRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 6/140 (4%)

Query: 1   MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
            V+GHE +G+IE +G  V  L  GD V L     C +C  C  G    C E         
Sbjct: 58  AVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEF---FGRNF 113

Query: 61  HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR--ANIGPETNVLIMGAGP 118
            G+ +            + ++    + +         +   +   +   +  V       
Sbjct: 114 SGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDE 173

Query: 119 IGLVTMLAARAFGAPRIVIV 138
           I    + + +      I+ +
Sbjct: 174 INQAAIDSRKGITLKPIIKI 193

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.3 bits (116), Expect = 6e-08
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)

Query: 82  VSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
           V   E A  +C  ++V     ++ N  P   V I G G +G V +  ARA G   +  +D
Sbjct: 1   VEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 199
           +DD +L +A+++GA   V          E+  +  +    G       A  N     A+G
Sbjct: 59  IDDAKLELARKLGASLTV------NARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIG 112

Query: 200 ATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 251
               GG + LVG+   +   P+    ++ + + G     +      L+    G
Sbjct: 113 MARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.8 bits (102), Expect = 4e-06
 Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 11/175 (6%)

Query: 82  VSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
           +     A  +C  L+V      R   GP   V I+G G IG +  L ++A GA   VI  
Sbjct: 1   IPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 59

Query: 140 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 199
               R   A ++GAD+         +  +  EK        +      +  +   +    
Sbjct: 60  SSRKR-EDAMKMGADHY----IATLEEGDWGEKYFDTFDLIVV--CASSLTDIDFNIMPK 112

Query: 200 ATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 253
           A   GG++  + +      + L P  ++ V +              L+L+    I
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 35  CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 94
               +  +    +      +       G L+     P D    LP N+SL+E  + + L+
Sbjct: 72  VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLT 131

Query: 95  VGVHACRRANIGPETNVLIMGAGPIGLV 122
           +           P     I+     G V
Sbjct: 132 IVDREVSL-EETPGALKDILQNRIQGRV 158

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 28/190 (14%), Positives = 63/190 (33%), Gaps = 20/190 (10%)

Query: 82  VSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVI 137
           +++ +GA     PL+  +       + P  +  I       +G       +      I +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 138 VDVD---DYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 193
           +      D  ++  KE+GA  ++     N ++    +++  K  G    ++ +C G  K+
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKS 119

Query: 194 MSTALGATCAGGKVCLV-GMGHHEMTVPLTPAAVREVDVVGVF----------RYKNTWP 242
            +         G +    GM    +T+P +    +     G +             +T  
Sbjct: 120 STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN 179

Query: 243 LCLELLRSGK 252
             +     GK
Sbjct: 180 QIIAWYEEGK 189

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 40.9 bits (94), Expect = 4e-05
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 6/157 (3%)

Query: 98  HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI 156
            A R+A++ P   +L++GAG       +      +   +I           AK  GAD +
Sbjct: 18  RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV 77

Query: 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE 216
           +  S   QD   E+ +I ++ G    +  + +   KT+S    A    GK  +VG+   +
Sbjct: 78  INASM--QDPLAEIRRITESKGVDAVIDLNNS--EKTLSVYPKALAKQGKYVMVGLFGAD 133

Query: 217 MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 252
           +        + E+  VG     ++ +   + L  +GK
Sbjct: 134 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 41.4 bits (97), Expect = 5e-05
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 110 NVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 168
            VL+ G    IG     A    GA  + + D+      VA+ IG         + ++   
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVR 65

Query: 169 EVEKIQKAMGTGIDVSFDCAGLN 191
            VE+   A+G  +DV  + A + 
Sbjct: 66  FVEEAAYALG-RVDVLVNNAAIA 87

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 15/156 (9%)

Query: 85  EEGAMCEPLSVGV----HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 140
           E+ A   PL           R    GP   V ++G G +G + +  A A GA  +     
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 63

Query: 141 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 200
           +  R   AK +GAD +         +         A     D   +       +      
Sbjct: 64  EAKR-EAAKALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 201 TCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF 235
               G + LVG        P     + +   + G  
Sbjct: 114 LKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSM 149

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 11/174 (6%)

Query: 83  SLEEGA-MCEPLSVGVHA-CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 140
             ++GA +  P      A    A +    +VL+ GA     +           +I+    
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 141 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 200
            +    +  + GA  +             ++KI+K +G            N  +S  L  
Sbjct: 62  TEEGQKIVLQNGAHEVFN-----HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 116

Query: 201 TCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT---WPLCLELLRSG 251
              GG+V +VG     + +       +E  ++GV  + +T   +      L++G
Sbjct: 117 LSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 406

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 8/93 (8%), Positives = 26/93 (27%), Gaps = 3/93 (3%)

Query: 98  HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
              ++  +      + +G+G +G   + AA   G       ++ D    +      +   
Sbjct: 207 DVYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKK 265

Query: 158 KVSTNLQDIAEEVEKIQKAMGTG--IDVSFDCA 188
           +       +      ++K+      +       
Sbjct: 266 RCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQC 298

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.3 bits (80), Expect = 0.003
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 11/165 (6%)

Query: 96  GVHACRRANIGPE-TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
            VH   +  + PE  +VL+ GA G +G + +      G   +      +    + +   +
Sbjct: 11  SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS 70

Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGM 212
           + I     + +D+ +   K           + D  G  K +++ L     GG        
Sbjct: 71  EVI-----SREDVYDGTLKAL--SKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLT 122

Query: 213 GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP 257
           G  E+   + P  +R V ++G+        +   +      D+KP
Sbjct: 123 GGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKP 167

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	290
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.97
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.93
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.91
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.9
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.88
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.87
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.87
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.86
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.85
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.85
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.84
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.84
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.83
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.83
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.83
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.83
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.81
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.78
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.78
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.77
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.72
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.72
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.69
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.5
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.47
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.38
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.37
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.35
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.35
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.59
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	98.46
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.26
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.1
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.1
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.89
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.84
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.83
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.79
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.73
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.72
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.71
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.71
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.65
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.6
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.58
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.57
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.55
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.53
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.52
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.51
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.5
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.5
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.49
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.46
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.45
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.43
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.41
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.41
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.41
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.41
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.4
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.39
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.39
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.37
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.35
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.34
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.33
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.32
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.32
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.32
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.29
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.28
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.26
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.25
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.22
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.22
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.2
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.2
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.19
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.19
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.18
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.18
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.17
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.17
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.16
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.16
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.15
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.14
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.14
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.13
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.09
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.08
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.06
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.04
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.04
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.04
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.01
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.95
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.94
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.92
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.92
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.88
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.81
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.81
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.79
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.76
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.75
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.75
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.74
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.73
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.71
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.67
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.63
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.62
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.6
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.59
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.58
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.56
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.56
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.49
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.42
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.42
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.38
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.37
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.27
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.24
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.18
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.16
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.16
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.02
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.02
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.96
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.94
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.89
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.84
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.77
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.75
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.71
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.69
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.6
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.58
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.57
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.54
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.16
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.13
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.02
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.01
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.94
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.85
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.85
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.83
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.77
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.72
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	94.71
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.69
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.69
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.66
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.66
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.64
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.61
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.61
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.53
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	94.51
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.44
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.43
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.41
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.4
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.4
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.25
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.22
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.16
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.15
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.09
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.06
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.05
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.99
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	93.91
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.91
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.9
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.83
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.79
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.71
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.63
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.54
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.53
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.45
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.35
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.34
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.32
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.28
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.24
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	93.22
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.19
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.16
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.15
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.05
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.01
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.99
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.98
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.94
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.83
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.69
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.68
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.68
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.62
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.6
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.6
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.58
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.55
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.47
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.26
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.2
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.13
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.11
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.07
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.01
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.01
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.0
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.98
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.92
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.89
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.86
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.85
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	91.84
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.83
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.64
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.62
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.59
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	91.58
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.45
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.37
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.36
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.36
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.32
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.24
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	91.19
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	91.17
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.13
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	91.08
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.03
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.96
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.95
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.89
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	90.87
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.77
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.73
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	90.47
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.47
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.47
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.45
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.43
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	90.4
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.32
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.3
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.23
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.1
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.09
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.05
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.88
d1qopb_	390	Tryptophan synthase, beta-subunit {Salmonella typh	89.8
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.73
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.68
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	89.66
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	89.57
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	89.55
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.39
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.28
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.21
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	89.07
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.07
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.04
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.92
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.84
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.8
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	88.48
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.48
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.41
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	88.31
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.27
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	88.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	87.73
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.67
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.66
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	87.61
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	87.47
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.41
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.3
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	87.29
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.23
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	87.12
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	86.86
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.69
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	86.67
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	86.57
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.57
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	86.08
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	86.05
d1v7ca_	351	Threonine synthase {Thermus thermophilus [TaxId: 2	86.03
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	85.98
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	85.81
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.67
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.66
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	85.62
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	85.61
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	85.53
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.44
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	85.4
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	85.28
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	85.21
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	85.21
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.09
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	84.89
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	84.71
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.7
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	84.64
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	84.56
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.4
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	84.27
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.93
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.86
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	83.79
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	83.73
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.66
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.65
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.21
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.14
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	82.94
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.84
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.82
d1ve5a1	310	Threonine deaminase {Thermus thermophilus [TaxId:	82.76
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.42
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	82.29
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	82.26
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.22
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.18
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.0
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	81.96
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	81.85
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	81.78
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.38
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	81.31
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.1
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.85
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.84
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.8
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	80.75
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	80.64
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.31
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	80.26
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	80.03

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-29  Score=193.01  Aligned_cols=170  Identities=46%  Similarity=0.820  Sum_probs=155.1

Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +|+++||+++|+++||+++++++++++++|+|+|+|++|++++|+++.+|+++|++++.+++|+++++++|++.+++++ 
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~-   79 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS-   79 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECS-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccc-
Confidence            5789999999999999999999999999999999999999999999999998899999999999999999999988743 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCcH
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  241 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l  241 (290)
                       .+++.+..+.+..+.+.++|++|||+|.+..++.++++++++|+++.+|......+++...+++|++++.|++.+..++
T Consensus        80 -~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~  158 (171)
T d1pl8a2          80 -KESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW  158 (171)
T ss_dssp             -SCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCH
T ss_pred             -ccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHH
Confidence             4566666666666678899999999999889999999999999999999877777888889999999999999888889


Q ss_pred             HHHHHHHHcCCC
Q 022879          242 PLCLELLRSGKI  253 (290)
Q Consensus       242 ~~~~~~~~~g~~  253 (290)
                      +++++++++|++
T Consensus       159 ~~al~li~~gki  170 (171)
T d1pl8a2         159 PVAISMLASKSV  170 (171)
T ss_dssp             HHHHHHHHTTSC
T ss_pred             HHHHHHHHcCCC
Confidence            999999999987

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=2.8e-29  Score=192.03  Aligned_cols=170  Identities=48%  Similarity=0.793  Sum_probs=154.9

Q ss_pred             CChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           82 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +|+++||+++|+++||++++.+++++|++|+|+|+|++|++++|+++.+|+ ++++++.+++|+++++++|++..+.++.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEeccc
Confidence            578999999999999999999999999999999999999999999999999 7999999999999999999998887776


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeecCCcH
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  241 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l  241 (290)
                      ...+..+..+++....+.++|++|||+|++..+..++++++++|+++.+|.......++...++.|++++.|++.+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~~  159 (170)
T d1e3ja2          80 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY  159 (170)
T ss_dssp             TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCH
T ss_pred             cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHHH
Confidence            66777777777777778899999999999888999999999999999999877666788888999999999998887899


Q ss_pred             HHHHHHHHcCC
Q 022879          242 PLCLELLRSGK  252 (290)
Q Consensus       242 ~~~~~~~~~g~  252 (290)
                      +++++++++|+
T Consensus       160 ~~ai~li~~Gk  170 (170)
T d1e3ja2         160 PIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHcCC
Confidence            99999999985

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=6e-27  Score=178.88  Aligned_cols=167  Identities=22%  Similarity=0.317  Sum_probs=142.1

Q ss_pred             CChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           82 VSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        82 ~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +|+++|+.+ .+++|+|++++.+++++|++|||+|+|++|++++|+++.+|+++|++++++++|+++++++|++++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            578899987 6899999999999999999999999999999999999999998899999999999999999999998754


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh----hhccCcEEEEeee
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVFR  236 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~~~~~  236 (290)
                        ++++.+.+.+++  ++.++|++|||+|++..+.+++++++++|+++.+|.......++...    ...+.+++.+...
T Consensus        81 --~~~~~~~v~~~t--~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          81 --NGHIEDQVMKLT--NGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             --GSCHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             --chhHHHHHHHHh--hccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence              567778787764  67889999999998888999999999999999999766544444332    3457788888765


Q ss_pred             c--CCcHHHHHHHHHcCC
Q 022879          237 Y--KNTWPLCLELLRSGK  252 (290)
Q Consensus       237 ~--~~~l~~~~~~~~~g~  252 (290)
                      .  +..++.+.+++++|+
T Consensus       157 ~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCCcccHHHHHHHHHcCC
Confidence            4  556778888988875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=8e-27  Score=178.21  Aligned_cols=167  Identities=26%  Similarity=0.380  Sum_probs=149.0

Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++.+||+++ ...|||++++..+++++++|+|+|+ |++|++++|+++.+|...|++++.+++|.++++++|++.++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            4788999885 6778999999899999999999996 9999999999999998889999999999999999999998874


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                        ..+++.+.+++.  +.++++|++|||+|++..++.++++++++|+++.+|....+.+++...++++++++.|++.+ +
T Consensus        81 --~~~~~~~~~~~~--~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~  156 (170)
T d1jvba2          81 --SMQDPLAEIRRI--TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ  156 (170)
T ss_dssp             --TTSCHHHHHHHH--TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred             --CCcCHHHHHHHH--hhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence              456777776654  35778999999999988899999999999999999988777888888999999999999886 6


Q ss_pred             CcHHHHHHHHHcCC
Q 022879          239 NTWPLCLELLRSGK  252 (290)
Q Consensus       239 ~~l~~~~~~~~~g~  252 (290)
                      ++++++++++++|+
T Consensus       157 ~d~~~~l~lv~~GK  170 (170)
T d1jvba2         157 SDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            78999999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.6e-26  Score=175.13  Aligned_cols=163  Identities=22%  Similarity=0.356  Sum_probs=138.2

Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +|+++||.++ ++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++++++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999774 88899999864 78999999999987 9999999999999999 5888888999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +  +++++.+.+++.+  .+.++|++||++|+ ..+..++++++++|+++.+|... ..+++...++.+++++.+.+.+ 
T Consensus        80 ~--~~~~~~~~i~~~t--~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 H--REVNYIDKIKKYV--GEKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             T--TSTTHHHHHHHHH--CTTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGG
T ss_pred             c--ccccHHHHhhhhh--ccCCceEEeecccH-HHHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecC
Confidence            5  4578888887763  67889999999995 68999999999999999998643 3466777788999999998654 


Q ss_pred             --CCcHHHHHHHHHcC
Q 022879          238 --KNTWPLCLELLRSG  251 (290)
Q Consensus       238 --~~~l~~~~~~~~~g  251 (290)
                        +++++++.++++++
T Consensus       154 ~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 STKEEFQQYAAALQAG  169 (174)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence              45677777777653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=1.3e-25  Score=171.78  Aligned_cols=166  Identities=25%  Similarity=0.437  Sum_probs=143.0

Q ss_pred             CChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      ++++.|++++ .+.|||+++. .+++++|++|||+|+|++|++++|+++.+|++++++++.+++|+++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            3567788775 5889999975 4889999999999999999999999999999988899999999999999999999885


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--CCccccchhhhccCcEEEEeeec
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      +  ++++.+.+++++   ++++|++|||+|.+..+..+++.++++|+++.+|...  ....++...++++++++.|++..
T Consensus        81 ~--~~~~~~~i~~~t---~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 K--TQDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             T--TSCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             C--CcCHHHHHHHHc---CCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            4  577888887763   3589999999999888999999999999999999644  34467778899999999998743


Q ss_pred             ----CCcHHHHHHHHHcCC
Q 022879          238 ----KNTWPLCLELLRSGK  252 (290)
Q Consensus       238 ----~~~l~~~~~~~~~g~  252 (290)
                          +++++++++++++|+
T Consensus       156 ~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSCHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence                567899999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.2e-25  Score=170.96  Aligned_cols=163  Identities=24%  Similarity=0.353  Sum_probs=142.7

Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +++++||+++ ...|||++++.+++++|++|+|+|+|++|++++|+++.+|+ +|++++++++|+++++++|+++++++.
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCcccccccc
Confidence            5789999885 77899999988999999999999999999999999999998 799999999999999999999998854


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CC
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  239 (290)
                        ++++.+.+++.    ..+.+.+++++++++.+..++++++++|+++.+|.......++...++.+++++.|++.+ ++
T Consensus        80 --~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~  153 (166)
T d1llua2          80 --QEDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRA  153 (166)
T ss_dssp             --TSCHHHHHHHH----HSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             --chhHHHHHHHh----hcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHH
Confidence              45666666543    245777788888888999999999999999999987777788888899999999999876 67


Q ss_pred             cHHHHHHHHHcC
Q 022879          240 TWPLCLELLRSG  251 (290)
Q Consensus       240 ~l~~~~~~~~~g  251 (290)
                      +++++++++++|
T Consensus       154 d~~e~l~l~~~G  165 (166)
T d1llua2         154 DLQEALDFAGEG  165 (166)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCc
Confidence            899999999987

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.93  E-value=1e-24  Score=166.42  Aligned_cols=166  Identities=22%  Similarity=0.332  Sum_probs=137.3

Q ss_pred             hhhhhhh-hhhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           84 LEEGAMC-EPLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        84 ~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +.+||++ ..+.|+|+++. .+++++|++|||+|+|++|++++|+++++|+++|++++.+++|+++++++|++++++++.
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            4678877 57889999975 589999999999999999999999999999989999999999999999999999998654


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhcc-CCEEEEeccCCCCccccchh-hhccCcEEEEeeec--
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFRY--  237 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~--  237 (290)
                      .+....+..+.   +.++++|++||++|.+..+...+..+++ +|+++.+|.......++..+ .+.+++++.|++..  
T Consensus        82 ~d~~~~~~~~~---~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 YDKPIYEVICE---KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF  158 (174)
T ss_dssp             CSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             chhHHHHHHHH---hcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCC
Confidence            43334333332   3567899999999998888888888876 59999999876666666654 45678899998743  


Q ss_pred             -CCcHHHHHHHHHcCC
Q 022879          238 -KNTWPLCLELLRSGK  252 (290)
Q Consensus       238 -~~~l~~~~~~~~~g~  252 (290)
                       .++++++++++++|+
T Consensus       159 ~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 KGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CGGGHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHcCC
Confidence             568999999999985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=3.4e-25  Score=170.86  Aligned_cols=165  Identities=22%  Similarity=0.345  Sum_probs=135.5

Q ss_pred             hhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC
Q 022879           85 EEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN  162 (290)
Q Consensus        85 ~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  162 (290)
                      ..+|.+ ....|||+++.+ .++++|++|||+|+|++|++++|+|+++|++.|+++++++++.++++++|++.++++.  
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~--   81 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR--   81 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT--
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc--
Confidence            344544 567899999976 7899999999999999999999999999998899999999999999999999999854  


Q ss_pred             cccHHHHHHHHHH-HhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch---hhhccCcEEEEeeec-
Q 022879          163 LQDIAEEVEKIQK-AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PAAVREVDVVGVFRY-  237 (290)
Q Consensus       163 ~~~~~~~~~~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~~~~~~i~~~~~~-  237 (290)
                      +.+..+..+++.+ +.+.++|+||||+|++..+..++++++++|+++.+|......+++..   .+++|++++.|++.+ 
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            3444444443333 35678999999999888899999999999999999976544444332   367899999999887 


Q ss_pred             CCcHHHHHHHHHcC
Q 022879          238 KNTWPLCLELLRSG  251 (290)
Q Consensus       238 ~~~l~~~~~~~~~g  251 (290)
                      ..++++++++++++
T Consensus       162 ~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHC
Confidence            67789999998875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=8.1e-25  Score=166.76  Aligned_cols=166  Identities=26%  Similarity=0.431  Sum_probs=136.4

Q ss_pred             Chhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           83 SLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        83 ~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +.++||++. .+.|+|+++. .+++++|++|+|+|+|++|++++|+++.+|+++|++++.+++|+++++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            456788774 7889999975 58999999999999999999999999999998899999999999999999999998865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCCccccchhhhccCcEEEEeeec--
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  237 (290)
                      ..++... .+.+.  +.+.++|++|||+|.+..+.+++++++++ |+++.+|....+.+++...++. +.++.|++..  
T Consensus        82 ~~~~~~~-~~~~~--~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 ELDKPVQ-DVITE--LTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGW  157 (174)
T ss_dssp             GCSSCHH-HHHHH--HHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred             cchhhhh-hhHhh--hhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCC
Confidence            4333333 33332  35779999999999999999999999996 9999999877666676555543 5688888643  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 022879          238 --KNTWPLCLELLRSGK  252 (290)
Q Consensus       238 --~~~l~~~~~~~~~g~  252 (290)
                        .+++.++++++++|+
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence              567888899998875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=5e-25  Score=168.31  Aligned_cols=163  Identities=24%  Similarity=0.362  Sum_probs=138.9

Q ss_pred             hhhhhhh-hhhHHHHHHHHh-c-CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           84 LEEGAMC-EPLSVGVHACRR-A-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        84 ~~~aa~~-~~~~ta~~~l~~-~-~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +.++|++ .+++|||+++.+ . .+++|++|||+|+|++|++++|+++.+|++.+++++.+++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            3566766 478899999976 3 589999999999999999999999999998899999999999999999999998854


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CC
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  239 (290)
                         ++..+...+.  +.+.++|++||++|++..++.+++.++++|+++.+|... +.+++...++++++++.|++.+ .+
T Consensus        86 ---~~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~~~~~~~~l~~k~~~i~Gs~~~~~~  159 (172)
T d1h2ba2          86 ---RDPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-ELRFPTIRVISSEVSFEGSLVGNYV  159 (172)
T ss_dssp             ---SCHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-CCCCCHHHHHHTTCEEEECCSCCHH
T ss_pred             ---ccHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-cccCCHHHHHhCCcEEEEEEecCHH
Confidence               3333444333  467789999999999888999999999999999999643 4577788899999999999876 67


Q ss_pred             cHHHHHHHHHcCC
Q 022879          240 TWPLCLELLRSGK  252 (290)
Q Consensus       240 ~l~~~~~~~~~g~  252 (290)
                      +++++++++++|+
T Consensus       160 d~~~~l~l~~~GK  172 (172)
T d1h2ba2         160 ELHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            8999999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=7.6e-25  Score=166.86  Aligned_cols=165  Identities=27%  Similarity=0.384  Sum_probs=144.9

Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +|+++||+++ ...|||++++.++++++++|||+|+|++|++++++++..|+ .+++++++++|+++++++|++.++++ 
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~-   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP-   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc-
Confidence            5889999885 77789999999999999999999999999999999999999 69999999999999999999999874 


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-CC
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  239 (290)
                       .++++...+++.+    .+.+.++++++++..+..++++++++|+++.+|....+..++...++.+++++.|++.+ ++
T Consensus        79 -~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~  153 (168)
T d1rjwa2          79 -LKEDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK  153 (168)
T ss_dssp             -TTSCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             -ccchhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHH
Confidence             4567777776653    34566667777788999999999999999999988777788888899999999999866 77


Q ss_pred             cHHHHHHHHHcCCC
Q 022879          240 TWPLCLELLRSGKI  253 (290)
Q Consensus       240 ~l~~~~~~~~~g~~  253 (290)
                      +++++++++++|++
T Consensus       154 ~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         154 DLQEALQFAAEGKV  167 (168)
T ss_dssp             HHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=3.9e-25  Score=170.85  Aligned_cols=167  Identities=20%  Similarity=0.284  Sum_probs=135.5

Q ss_pred             hhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           85 EEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        85 ~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      ++||++ .++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|+ .++++.+++++.++++++|+++++++  
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~--   77 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDS--   77 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEET--
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccC--
Confidence            367766 488999999865 78999999999987 9999999999999999 67777788999999999999999884  


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCCCcc-ccchhhhccCcEEEEeeec---
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY---  237 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~---  237 (290)
                      +++++.+.+++++  ++.++|++||++|+ +.+..++++|+++|+++.+|....... ......+.++.++.+....   
T Consensus        78 ~~~~~~~~v~~~t--~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          78 RSVDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             TCSTHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             CccCHHHHHHHHh--CCCCEEEEEecccc-hHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence            4578888887763  57899999999997 688999999999999999986543222 2222244677888776432   


Q ss_pred             -------CCcHHHHHHHHHcCCCCCCC
Q 022879          238 -------KNTWPLCLELLRSGKIDVKP  257 (290)
Q Consensus       238 -------~~~l~~~~~~~~~g~~~~~~  257 (290)
                             ++.++++++++++|++++.|
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                   45688899999999996544

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=1.1e-26  Score=178.44  Aligned_cols=116  Identities=47%  Similarity=0.844  Sum_probs=109.9

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||.+.+..+|+.|.+|..++.++|++..+.+....+|+|+||+.+++++++++|+
T Consensus        59 ~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~  138 (178)
T d1e3ja1          59 MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPD  138 (178)
T ss_dssp             EECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCT
T ss_pred             eeeccccceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCC
Confidence            37999999999999999999999999999999999999999999999999999998888899999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECC
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGA  116 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Ga  116 (290)
                      ++++++|+.+ ..+.|+|++++.+++++|++|+|.|+
T Consensus       139 ~~~~~~aa~~~~~~~ta~~a~~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         139 NCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS  175 (178)
T ss_dssp             TCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEE
T ss_pred             CCCHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEEcc
Confidence            9999999977 58899999998889999999999864

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.9e-25  Score=169.84  Aligned_cols=165  Identities=18%  Similarity=0.220  Sum_probs=130.8

Q ss_pred             CChhhhhhhh-hhHHHHHHHH----hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACR----RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~----~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +|+++||.++ +..|||++++    ....++|++|||+|+ |++|.+++|+++.+|+ .|+++.++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5889999886 7779997764    267889999999987 9999999999999999 5888889999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC-CCCccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HHEMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++++.   .+.+.++   .+.++++|+|||++|+ +.+...+++|+++|+++.+|.. .....++...+++|++++.|.
T Consensus        80 vi~~~~---~~~~~~~---~~~~~gvD~vid~vgg-~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED---VMAERIR---PLDKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch---hHHHHHH---HhhccCcCEEEEcCCc-hhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            998642   2323222   3467899999999997 6899999999999999999975 455688899999999999997


Q ss_pred             eec---CCcHHHHHHHHHcCCCCC
Q 022879          235 FRY---KNTWPLCLELLRSGKIDV  255 (290)
Q Consensus       235 ~~~---~~~l~~~~~~~~~g~~~~  255 (290)
                      ...   .+...++++.+. +.++|
T Consensus       153 ~~~~~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         153 DSVYCPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             CSSSCCHHHHHHHHHHHH-TTTCC
T ss_pred             eCCcCCHHHHHHHHHHHh-cccCC
Confidence            544   344555555553 66643

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=5.2e-24  Score=163.42  Aligned_cols=167  Identities=26%  Similarity=0.306  Sum_probs=134.9

Q ss_pred             Chhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           83 SLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        83 ~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++||++. .+.|+|+++.. +++++|++|||+|+|++|++++|+++.+|+++|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            567888885 78899999864 8999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC--CCccccchhhhccCcEEEEeeec-
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ...++..+.+++   +.+.++|++||++|.+..+..+...++++|+++.++...  .....+....+.+..++.|++.. 
T Consensus        82 ~~~~~~~~~~~~---~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 DFSKPIQEVLIE---MTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhhHHHHHHHH---HcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            544455444443   356789999999999888888999999998888775432  22233344456688899998754 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 022879          238 ---KNTWPLCLELLRSGK  252 (290)
Q Consensus       238 ---~~~l~~~~~~~~~g~  252 (290)
                         .+++.++++++++|+
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence               456888899998885

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=6.5e-25  Score=170.15  Aligned_cols=169  Identities=16%  Similarity=0.249  Sum_probs=136.1

Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEE-CC-CHHHHHHHHHHHHCCCCeEEEEeCC----hhHHHHHHHcCC
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVD----DYRLSVAKEIGA  153 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~-Ga-g~vG~~ai~la~~~g~~~vv~v~~~----~~~~~~~~~lg~  153 (290)
                      +|+++||+++ .+.|||+++.. .++++|++++|+ |+ |++|++++|+||.+|++ ++++.++    +++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~-vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCe-EEEEEecccccchHHhhhhhccc
Confidence            5789999885 88999999976 789999999997 66 99999999999999995 5555433    345667889999


Q ss_pred             CEEEecCC-CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC-CCCccccchhhhccCcEE
Q 022879          154 DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HHEMTVPLTPAAVREVDV  231 (290)
Q Consensus       154 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~i  231 (290)
                      +++++++. ...++.+.+++++...+.++|++||++|+ +.+..++++|+++|+++.+|.. .....++...++++++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            99998643 23456667777776678899999999996 6789999999999999999954 445567788888999999


Q ss_pred             EEeeec----------CCcHHHHHHHHHcCC
Q 022879          232 VGVFRY----------KNTWPLCLELLRSGK  252 (290)
Q Consensus       232 ~~~~~~----------~~~l~~~~~~~~~g~  252 (290)
                      .|.+..          .+.++++++++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            997543          345778888888775

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=4.5e-25  Score=167.86  Aligned_cols=162  Identities=20%  Similarity=0.217  Sum_probs=137.6

Q ss_pred             Chhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCC
Q 022879           83 SLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  161 (290)
Q Consensus        83 ~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  161 (290)
                      +.+.||++. ...|+|++++.+++++|++|+|.|+|++|++++|+++.+|+ ++++++.+++|.++++++|+++++++..
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~~   80 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE   80 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeeccc
Confidence            446677664 66799999998999999999999999999999999999999 6888999999999999999999987543


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHH--HHHHHHHHhccCCEEEEeccCCCCccccchhhhccCcEEEEeeec-C
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  238 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  238 (290)
                      . .++.+       ....++|.++||++...  .+..+++.++++|+++.+|.......++...++++++++.|++.. +
T Consensus        81 ~-~~~~~-------~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          81 E-GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSI  152 (168)
T ss_dssp             T-SCHHH-------HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCH
T ss_pred             h-HHHHH-------hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCH
Confidence            2 23322       23568999999988643  356788999999999999987777788888999999999999776 7


Q ss_pred             CcHHHHHHHHHcCCC
Q 022879          239 NTWPLCLELLRSGKI  253 (290)
Q Consensus       239 ~~l~~~~~~~~~g~~  253 (290)
                      ++++++++++++|++
T Consensus       153 ~~~~e~l~li~~gkI  167 (168)
T d1piwa2         153 KELNQLLKLVSEKDI  167 (168)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            789999999999987

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.92  E-value=3.3e-24  Score=165.25  Aligned_cols=155  Identities=21%  Similarity=0.233  Sum_probs=127.2

Q ss_pred             hhhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHH
Q 022879           91 EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  168 (290)
Q Consensus        91 ~~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  168 (290)
                      .++.|||+++.. +++++|++|||+|+ |++|++++|+++..|+ +|+++.+++++.++++++|+++++++  .++++.+
T Consensus        12 ~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~--~~~~~~~   88 (182)
T d1v3va2          12 MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNY--KTVNSLE   88 (182)
T ss_dssp             HHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEET--TSCSCHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccc--ccccHHH
Confidence            578899999975 88999999999987 9999999999999999 68999899999999999999999885  3466666


Q ss_pred             HHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-------CccccchhhhccCcEEEEeeec----
Q 022879          169 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY----  237 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~----  237 (290)
                      .+.+.  +.+.++|+|||++|+ +.++.++++++++|+++.+|....       ...+....++++++++.|++..    
T Consensus        89 ~~~~~--~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~  165 (182)
T d1v3va2          89 EALKK--ASPDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG  165 (182)
T ss_dssp             HHHHH--HCTTCEEEEEESSCH-HHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCH
T ss_pred             HHHHH--hhcCCCceeEEecCc-hhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccCh
Confidence            55544  367789999999995 789999999999999999985321       1234445688999999997543    


Q ss_pred             ---CCcHHHHHHHHHcC
Q 022879          238 ---KNTWPLCLELLRSG  251 (290)
Q Consensus       238 ---~~~l~~~~~~~~~g  251 (290)
                         .+.++++.+++++|
T Consensus       166 ~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         166 DVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCc
Confidence               34567778888775

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.7e-24  Score=164.71  Aligned_cols=137  Identities=23%  Similarity=0.274  Sum_probs=117.0

Q ss_pred             CChhhhhhhh-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           82 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      +|+++||+++ .+.|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|+ .|++++++++|.++++++|++++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999885 78899999976 78999999999976 8899999999999999 6999999999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-Cccccchhh
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPA  224 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~  224 (290)
                      +  .++++.+.+++++  ++.++|+++|++|+ +.+..++.+++++|+++.++.... ...++...+
T Consensus        80 ~--~~~d~~~~v~~~t--~g~g~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  141 (179)
T d1qora2          80 Y--REEDLVERLKEIT--GGKKVRVVYDSVGR-DTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGIL  141 (179)
T ss_dssp             T--TTSCHHHHHHHHT--TTCCEEEEEECSCG-GGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHH
T ss_pred             C--CCCCHHHHHHHHh--CCCCeEEEEeCccH-HHHHHHHHHHhcCCeeeecccccCCccccchhhh
Confidence            5  4578988888763  67899999999996 688999999999999999986543 333443333

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=2.6e-24  Score=163.91  Aligned_cols=144  Identities=24%  Similarity=0.417  Sum_probs=119.2

Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      +++++||.++ ++.|||++++.+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeeeh
Confidence            5789999775 8889999998899999999999987 9999999999999999 68888899999999999999999875


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      .    +.   .++.  +.+.++|++||++|.  .+..++++++++|+++.+|... ...+++...++.|++++.|++..
T Consensus        80 ~----~~---~~~~--~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          80 A----EV---PERA--KAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             G----GH---HHHH--HHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             h----hh---hhhh--hccccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            3    22   2222  356789999999884  5789999999999999999654 44467778889999999998654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.3e-24  Score=163.96  Aligned_cols=163  Identities=18%  Similarity=0.192  Sum_probs=131.6

Q ss_pred             CCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEec
Q 022879           81 NVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  159 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  159 (290)
                      ..+++.+|++. ...|+|++++.+++++|++|||+|+|++|++++|+++.+|+ .+++++.++++.++++++|++.++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             cccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            34556666654 45689999988999999999999999999999999999999 56788899999999999999999885


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC-CccccchhhhccCcEEEEeeec-
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      ..  ++..       ....+++|++||++|.+..+..+++.++++|+++.+|.... ...++...++.+++++.|++.+ 
T Consensus        82 ~~--~~~~-------~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          82 RN--ADEM-------AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TC--HHHH-------HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred             ch--hhHH-------HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence            42  2211       12456899999999987789999999999999999996543 3355667788999999999876 


Q ss_pred             CCcHHHHHHHHHcCCC
Q 022879          238 KNTWPLCLELLRSGKI  253 (290)
Q Consensus       238 ~~~l~~~~~~~~~g~~  253 (290)
                      .+++++++++++++++
T Consensus       153 ~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            7789999999988654

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.2e-25  Score=169.37  Aligned_cols=113  Identities=45%  Similarity=0.729  Sum_probs=104.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +|+|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.|++++|.+..+++....+|+|+||+.+++++++++|+
T Consensus        65 ~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~  144 (185)
T d1pl8a1          65 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPD  144 (185)
T ss_dssp             EECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCT
T ss_pred             eeeeeeeeeeEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCC
Confidence            37999999999999999999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             CCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEE
Q 022879           81 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM  114 (290)
Q Consensus        81 ~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~  114 (290)
                      ++++++|+.+ ++++++++++..++++|++|||.
T Consensus       145 ~~~~~~aa~~-pl~~a~~a~~~~~~~~G~~VlIg  177 (185)
T d1pl8a1         145 NVKPLVTHRF-PLEKALEAFETFKKGLGLKIMLK  177 (185)
T ss_dssp             TCGGGEEEEE-EGGGHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCHHHHHHH-HHHHHHHHHHHhCCCCCCEEEEE
Confidence            9999888754 56678888888888999999994

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.90  E-value=1.5e-22  Score=155.12  Aligned_cols=167  Identities=24%  Similarity=0.307  Sum_probs=133.1

Q ss_pred             Chhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           83 SLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        83 ~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++||+++ .+.|+|+++. .+++++|++|||+|+|++|++++++++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            567888885 7899999985 48999999999999999999999999999998999999999999999999999998865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe-ccCCCCc-cccchhhhccCcEEEEeeec-
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV-GMGHHEM-TVPLTPAAVREVDVVGVFRY-  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~-g~~~~~~-~~~~~~~~~~~~~i~~~~~~-  237 (290)
                      +.++...+.+++   +.++++|++||++|.+..+..++..++++|..+.+ +...... .+....++.+++++.|++.. 
T Consensus        82 ~~~~~~~~~~~~---~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 DYKKPIQEVLTE---MSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHHHH---HhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            444444443333   35679999999999988888999999887544444 4443333 33344567799999998643 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 022879          238 ---KNTWPLCLELLRSGK  252 (290)
Q Consensus       238 ---~~~l~~~~~~~~~g~  252 (290)
                         ++++.++++++.+|+
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence               567888899988875

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.90  E-value=3.4e-24  Score=163.01  Aligned_cols=111  Identities=26%  Similarity=0.441  Sum_probs=102.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|||++|+|+++|+++++|++||||++.+...|+.|..|+.+++++|.+....+. ..+|+|+||+.+++++++++|+
T Consensus        59 ~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~  137 (171)
T d1h2ba1          59 YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPK  137 (171)
T ss_dssp             EECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCT
T ss_pred             cccceeeeeeeecccCCCCcCCCCCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCC
Confidence            378999999999999999999999999999999999999999999999999888765 5789999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI  113 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI  113 (290)
                      +++++.++.+ .+++|++++++.+.+ .|++|||
T Consensus       138 ~~~~e~aa~~~~~~~ta~~al~~~~~-~G~~VlI  170 (171)
T d1h2ba1         138 DVRVEVDIHKLDEINDVLERLEKGEV-LGRAVLI  170 (171)
T ss_dssp             TCCCCEEEEEGGGHHHHHHHHHTTCC-SSEEEEE
T ss_pred             CCCHHHHHHHHhHHHHHHHHHHhcCC-CCCEEEe
Confidence            9999877644 788999999988877 8999998

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.90  E-value=2e-22  Score=154.20  Aligned_cols=167  Identities=23%  Similarity=0.318  Sum_probs=136.0

Q ss_pred             Chhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           83 SLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        83 ~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      ++++||++. .+.|+|+++. .+++++|++|+|+|+|++|.+++++++..|...|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            567888885 7889999985 58999999999999999999999999999998999999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCC-EEEEeccCCCCccccchhhhccCcEEEEeeec--
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG-KVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  237 (290)
                      ..+ ++.+.+.+.  +.+.++|++||++|....+..++..++++| .++..+........+....+.+..++.|++..  
T Consensus        82 ~~~-~~~~~~~~~--~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 DHS-EPISQVLSK--MTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GCS-SCHHHHHHH--HHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             Ccc-hhHHHHHHh--hccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            432 333344433  356789999999999888888888877765 44555565555566677777889999998643  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 022879          238 --KNTWPLCLELLRSGK  252 (290)
Q Consensus       238 --~~~l~~~~~~~~~g~  252 (290)
                        ++++.++++++++|+
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence              568899999999885

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.2e-22  Score=157.44  Aligned_cols=162  Identities=20%  Similarity=0.301  Sum_probs=131.8

Q ss_pred             hhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccH
Q 022879           87 GAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  166 (290)
Q Consensus        87 aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~  166 (290)
                      +++..+++|+|++++.+++++|++|||+|+|++|++++++++.+|+.+|++++.+++|+++++++|++++++  ...+++
T Consensus         5 ~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~--~~~~~~   82 (195)
T d1kola2           5 TCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADL--SLDTPL   82 (195)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEET--TSSSCH
T ss_pred             HhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEe--CCCcCH
Confidence            334469999999999999999999999999999999999999999999999999999999999999999876  445788


Q ss_pred             HHHHHHHHHHhCCCccEEEEccCC---------------HHHHHHHHHHhccCCEEEEeccCCCCc-------------c
Q 022879          167 AEEVEKIQKAMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGMGHHEM-------------T  218 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~~~~-------------~  218 (290)
                      .+.+.+++  ++.++|++||++|.               ++.++.+++.++++|+++.+|......             .
T Consensus        83 ~~~i~~~t--~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          83 HEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             HHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             HHHHHHHh--CCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            88887764  67899999999983               368999999999999999999644322             2


Q ss_pred             ccchhhhccCcEEEEeeec-CCcHHHHHHHHHcCC
Q 022879          219 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  252 (290)
Q Consensus       219 ~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~g~  252 (290)
                      ++...++.|++++.+.... +..++++++++.+++
T Consensus       161 ~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         161 IRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            2333456677777543322 455778888887664

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.90  E-value=2.8e-22  Score=152.99  Aligned_cols=164  Identities=19%  Similarity=0.291  Sum_probs=131.3

Q ss_pred             Chhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC
Q 022879           83 SLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  160 (290)
Q Consensus        83 ~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  160 (290)
                      +++.||++. .+.|+|+++. .+++++|++|+|+|+|++|++++|+++.+|+.+|++++.+++|+++++++|+++++++.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            578899885 8889999985 48899999999999999999999999999988999999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccC-CEEEEeccCCCCccccch-hhhccCcEEEEeeec-
Q 022879          161 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY-  237 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~-  237 (290)
                      +. .+..+.+.+.  +.+.++|++||++|.+.....++..+.++ |+++.+|.......++.. ...+++.++.|++.. 
T Consensus        83 ~~-~~~~~~~~~~--~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 DS-TKPISEVLSE--MTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG  159 (176)
T ss_dssp             GC-SSCHHHHHHH--HHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             cc-chHHHHHHHH--hccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeC
Confidence            32 2233444433  46789999999999988888888877665 999999976655544443 345678899998754 


Q ss_pred             ---CCcHHHHHHHHH
Q 022879          238 ---KNTWPLCLELLR  249 (290)
Q Consensus       238 ---~~~l~~~~~~~~  249 (290)
                         ++++.++++++.
T Consensus       160 ~~~~~dip~li~~~~  174 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFL  174 (176)
T ss_dssp             CCHHHHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHh
Confidence               456666666654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=3e-22  Score=154.64  Aligned_cols=165  Identities=19%  Similarity=0.262  Sum_probs=122.3

Q ss_pred             CChhhhhhhhhhHHHHHHHHh-cCCCCC--CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCEE
Q 022879           82 VSLEEGAMCEPLSVGVHACRR-ANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVAKEIGADNI  156 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~-~~~~~~--~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~  156 (290)
                      +|+.+.|+-.+..|||+++.. +++++|  ++|||+|+ |++|++++|+||.+|+++++++++++++. ++.+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            456666644578899999865 778877  88999986 99999999999999998787776666554 45678999999


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCCC---Cc--cccc-----hhhhc
Q 022879          157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EM--TVPL-----TPAAV  226 (290)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~--~~~~-----~~~~~  226 (290)
                      +++.  ++++.+.+++.   .+.++|++||++|+ +.+...+++++++|+++.+|..+.   ..  ..+.     ..+..
T Consensus        82 i~~~--~~~~~~~~~~~---~~~GvDvv~D~vGg-~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          82 VNYK--TGNVAEQLREA---CPGGVDVYFDNVGG-DISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EETT--SSCHHHHHHHH---CTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             eecc--chhHHHHHHHH---hccCceEEEecCCc-hhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            9854  56777777765   35789999999996 689999999999999999985332   11  1111     12456


Q ss_pred             cCcEEEEeeec------CCcHHHHHHHHHcCC
Q 022879          227 REVDVVGVFRY------KNTWPLCLELLRSGK  252 (290)
Q Consensus       227 ~~~~i~~~~~~------~~~l~~~~~~~~~g~  252 (290)
                      +++++.+....      .+.++++.+++++|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            88888876432      345677778888775

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.87  E-value=1.9e-22  Score=155.95  Aligned_cols=114  Identities=23%  Similarity=0.375  Sum_probs=95.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----------------------
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----------------------   58 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------   58 (290)
                      +|+|||++|+|+++|+++++|++||||+..+ .+|++|.+|+.+++++|++.......                      
T Consensus        58 ~i~GHE~~G~V~~vG~~v~~~~vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~  136 (194)
T d1f8fa1          58 AVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHF  136 (194)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCG
T ss_pred             cccccceEEEeeecCccceeEccCceeeeec-ccccCChhhhCCCcccccccccceeccccccceeeeecCCceeecccc
Confidence            4899999999999999999999999996654 48999999999999999975222110                      


Q ss_pred             CCCcccceeEeecCCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 022879           59 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  138 (290)
Q Consensus        59 ~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v  138 (290)
                      ...|+|+||+++++.+++++|++++++++                       +++.|+|++|++++|+++.+|++.++++
T Consensus       137 ~~~g~fae~~~v~~~~~~~ip~~i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         137 FAQSSFATYALSRENNTVKVTKDFPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             GGTCCSBSEEEEEGGGEEEECTTCCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             ccccccceeEEEehHHEEECCCCCCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            11379999999999999999999886544                       4456789999999999999999877765

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1.7e-22  Score=155.78  Aligned_cols=114  Identities=23%  Similarity=0.396  Sum_probs=100.1

Q ss_pred             CccccceeEEEEEeCCCC-CCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCcccc------CCCCCcccceeEeecC
Q 022879            1 MVIGHECAGVIEKVGSEV-KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPA   72 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~   72 (290)
                      +|+|||++|+|+++|+++ +.+++||||...+. .+|+.|.+|..+++++|.+....+      +...+|+|+||+++++
T Consensus        64 ~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~  143 (192)
T d1piwa1          64 LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHE  143 (192)
T ss_dssp             EECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEG
T ss_pred             cCcccccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeeh
Confidence            489999999999999988 66999999987664 479999999999999999876653      3456899999999999


Q ss_pred             CceEECCCCCChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEE
Q 022879           73 DLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIM  114 (290)
Q Consensus        73 ~~~~~~P~~~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~  114 (290)
                      ++++++|++++++.|+++. .+.|||++++.++++++++|||.
T Consensus       144 ~~~~~iP~~l~~e~Aal~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         144 HFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             GGEEECCTTCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            9999999999998887775 46789999988999999999985

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.86  E-value=6.9e-22  Score=153.81  Aligned_cols=114  Identities=25%  Similarity=0.312  Sum_probs=100.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC--------------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~   60 (290)
                      +++|||++|+|+++|+++++|++||||.+.+..+|+.|.+|+.+++++|.+.......                    ..
T Consensus        64 ~i~GhE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  143 (199)
T d1cdoa1          64 VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLG  143 (199)
T ss_dssp             EECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGG
T ss_pred             cccccccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccc
Confidence            3789999999999999999999999999999999999999999999999865333221                    12


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIM  114 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI~  114 (290)
                      +|+|+||+++++++++++|++++++++|++ .++.|++.+++. .+.+.|++|||.
T Consensus       144 ~Ggfaey~~v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         144 TSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cCCceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            599999999999999999999999998876 588899999976 677899999983

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=5.7e-25  Score=171.05  Aligned_cols=128  Identities=27%  Similarity=0.350  Sum_probs=102.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc---------cCCCCCcccceeEeec
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------ATPPVHGSLANQVVHP   71 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~e~~~v~   71 (290)
                      +++|||++|+|+++|++|++|++||||.+.+..+|+.|.+|+.++++.|......         .....+|+|+||+++|
T Consensus        62 ~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp  141 (201)
T d1kola1          62 LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVP  141 (201)
T ss_dssp             CBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEES
T ss_pred             eeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEee
Confidence            5899999999999999999999999999999999999999999999998765322         1124579999999998


Q ss_pred             C--CceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCC
Q 022879           72 A--DLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA  132 (290)
Q Consensus        72 ~--~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~  132 (290)
                      .  .+++++|++.++.+++.+ .+++++++++.....+.+    +.|+|++|++++|.||++|+
T Consensus       142 ~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         142 YADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             SHHHHCEECSCHHHHHHTCCHHHHHTEEEECGGGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             hHHCeEEECCCCCChHHHHHHHHHHHHHHHHHHhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            5  369999998665555544 566667766654333333    24889999999999999885

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=8.4e-22  Score=149.89  Aligned_cols=145  Identities=17%  Similarity=0.233  Sum_probs=116.8

Q ss_pred             CChhhhhhhh-hhHHHHHHHH---hcC-CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 022879           82 VSLEEGAMCE-PLSVGVHACR---RAN-IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  155 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~---~~~-~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  155 (290)
                      +|+.+||.++ +..|||+++.   ... ..++++|||+|+ |++|++++|+||.+|+ .|+++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            4788999885 6668887653   333 445669999987 9999999999999999 5888889999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEe
Q 022879          156 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGV  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~  234 (290)
                      +++++.  .++.+.+      .....|.++|++|+ ..+...+++++++|+++.+|... ...+.+...++.|++++.|.
T Consensus        80 vi~~~~--~~~~~~l------~~~~~~~vvD~Vgg-~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE--FAESRPL------EKQVWAGAIDTVGD-KVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG--SSSCCSS------CCCCEEEEEESSCH-HHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc--HHHHHHH------HhhcCCeeEEEcch-HHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            998653  2322221      23557999999996 68999999999999999999654 45577788899999999997


Q ss_pred             ee
Q 022879          235 FR  236 (290)
Q Consensus       235 ~~  236 (290)
                      ..
T Consensus       151 ~~  152 (177)
T d1o89a2         151 DS  152 (177)
T ss_dssp             CS
T ss_pred             ec
Confidence            44

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=1.3e-21  Score=149.45  Aligned_cols=109  Identities=26%  Similarity=0.503  Sum_probs=94.8

Q ss_pred             CccccceeEEEEEeCCCCC-----CCCCCCEEEEcCCcCCCCChhhcCCCC-CCCCCCccccCC-------CCCccccee
Q 022879            1 MVIGHECAGVIEKVGSEVK-----TLVPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFATP-------PVHGSLANQ   67 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~-----~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~g~~~e~   67 (290)
                      +|+|||++|+|+++|++|+     ++++||+|...+..+|++|.+|+.++. ++|++.+++|..       ..+|+|+||
T Consensus        60 ~vlGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~  139 (184)
T d1vj0a1          60 IILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSH  139 (184)
T ss_dssp             BCCCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSE
T ss_pred             cccceeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCc
Confidence            5899999999999999886     468999999999999999999999985 579998887642       358999999


Q ss_pred             Eeec-CCceEECCCCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEE
Q 022879           68 VVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM  114 (290)
Q Consensus        68 ~~v~-~~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~  114 (290)
                      +.++ +.+++++|+++++++     ++++|+++++.+++++|++|||+
T Consensus       140 ~~v~~~~~v~~ip~~l~~~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         140 IVLDPETDVLKVSEKITHRL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             EEECTTCCEEEECTTCCEEE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             EEechhHcEEECCCCCCHHH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            9996 579999999999653     45678888888889999999997

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=3.5e-21  Score=147.01  Aligned_cols=112  Identities=28%  Similarity=0.372  Sum_probs=98.1

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|+++++|++||||...+.. .|+.|.+|+.++.++|+.....|. ..+|+|+||+.+++++++++|
T Consensus        62 ~i~GhE~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iP  140 (175)
T d1llua1          62 FIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILP  140 (175)
T ss_dssp             BCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECC
T ss_pred             cCCCCcceEEEEEeCCCccccccCCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECC
Confidence            478999999999999999999999999986544 699999999999999999988876 578999999999999999999


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEE
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM  114 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~  114 (290)
                      +++++..++.+ ..+.|+++.++... .+|++|||.
T Consensus       141 d~l~~~~a~~~~~~~~t~~~~~~~g~-~~G~~VLVl  175 (175)
T d1llua1         141 KNVKATIHPGKLDDINQILDQMRAGQ-IEGRIVLEM  175 (175)
T ss_dssp             TTCCCCEEEECGGGHHHHHHHHHTTC-CSSEEEEEC
T ss_pred             CCCChhHHHHHHhHHHHHHHHHHhCC-CCCCEEEeC
Confidence            99998877744 67888888876544 479999983

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.83  E-value=7.1e-21  Score=144.82  Aligned_cols=113  Identities=31%  Similarity=0.473  Sum_probs=97.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCC-cCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P   79 (290)
                      +++|||++|+|+++|++++++++||||++.+. ..|+.|..|..+..++|......|. ..+|+|+||+++++++++++|
T Consensus        57 ~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP  135 (171)
T d1rjwa1          57 LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIP  135 (171)
T ss_dssp             BCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECC
T ss_pred             cccCCEEEEEEEEecccccCceeeeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECC
Confidence            47899999999999999999999999988654 4688999999999999999888775 578999999999999999999


Q ss_pred             CCCChhhhhhhhhhHHHHHHHHhcCCCCCCeEEEECC
Q 022879           80 DNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA  116 (290)
Q Consensus        80 ~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~Ga  116 (290)
                      ++++++.|+ +.++.++++.+..+.+ +|++|||.|.
T Consensus       136 ~~~~~e~A~-l~~~~~~~~~~~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         136 DNTIIEVQP-LEKINEVFDRMLKGQI-NGRVVLTLED  170 (171)
T ss_dssp             TTCCEEEEE-GGGHHHHHHHHHTTCC-SSEEEEECCC
T ss_pred             CCCCHHHHH-HHHHHHHHHHHHhcCC-CCCEEEEeCC
Confidence            999986654 4567778877766555 5999999873

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.83  E-value=5e-21  Score=146.43  Aligned_cols=111  Identities=29%  Similarity=0.413  Sum_probs=94.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCc-eEECC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKLP   79 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~-~~~~P   79 (290)
                      +|+|||++|+|+++|+++++|++||||.+.+..+|+.|.+|+.++.++|++..++|. ..+|+|+||+.+++.. ++++|
T Consensus        64 ~v~GhE~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~  142 (177)
T d1jvba1          64 VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLR  142 (177)
T ss_dssp             EECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECS
T ss_pred             ccccceEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECC
Confidence            379999999999999999999999999999999999999999999999999988865 5789999999997655 55555


Q ss_pred             CCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEE
Q 022879           80 DNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI  113 (290)
Q Consensus        80 ~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI  113 (290)
                      +..+.+.|+.. .+++++++++..+++ .|++|||
T Consensus       143 ~~~~~~~a~~~~~~~~~a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         143 RVKPMITKTMKLEEANEAIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             SSCCCCEEEEEGGGHHHHHHHHHTTCC-CSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhhcc-cCCceEC
Confidence            55444444433 588899999988776 5899987

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.83  E-value=7.2e-21  Score=148.55  Aligned_cols=112  Identities=27%  Similarity=0.426  Sum_probs=95.4

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC----------------------
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----------------------   58 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------   58 (290)
                      +++|||++|+|+++|++|+++++||||++.+...|+.|.+|..+++++|.....++..                      
T Consensus        63 ~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~  142 (202)
T d1e3ia1          63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIY  142 (202)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEB
T ss_pred             cccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeee
Confidence            4899999999999999999999999999999999999999999999999977655431                      


Q ss_pred             --CCCcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEE
Q 022879           59 --PVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM  114 (290)
Q Consensus        59 --~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~  114 (290)
                        ...|+|+||+++++..++++|++++++.++++ ..+.+++.+++.  +++|++|.|.
T Consensus       143 ~~~~~G~faey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi  199 (202)
T d1e3ia1         143 HFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTI  199 (202)
T ss_dssp             CCTTTCCSBSEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEE
T ss_pred             cccccCCceEEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEE
Confidence              12499999999999999999999999877765 466677777754  4678887764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=1.6e-20  Score=141.40  Aligned_cols=134  Identities=19%  Similarity=0.268  Sum_probs=108.3

Q ss_pred             HHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHH
Q 022879           96 GVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        96 a~~~l~~-~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      +++++.. ...+++++|||+|+ |++|.+++|+|+.+|+ +|+++.++++|.++++++|++.+++++.   ...+.   .
T Consensus        11 a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~---~~~~~---~   83 (167)
T d1tt7a2          11 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED---VYDGT---L   83 (167)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HCSSC---C
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc---hhchh---h
Confidence            3455544 55667889999987 9999999999999999 5889989999999999999999987531   11111   1


Q ss_pred             HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC-CCccccchhhhccCcEEEEeeec
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  237 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~  237 (290)
                      ....+.++|+|||++|+ +.+..++++|+++|+++.+|... ...+++...++.|++++.|....
T Consensus        84 ~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~  147 (167)
T d1tt7a2          84 KALSKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV  147 (167)
T ss_dssp             CSSCCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred             hcccCCCceEEEecCcH-HHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence            12356789999999997 68999999999999999999655 45578888899999999997544

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.81  E-value=3.6e-20  Score=143.49  Aligned_cols=113  Identities=20%  Similarity=0.241  Sum_probs=96.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC--------------------CCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~   60 (290)
                      +++|||++|+|+++|++|+++++||+|.+.+..+|+.|.+|..++.++|+....+..                    ...
T Consensus        62 ~v~GhE~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g  141 (197)
T d2fzwa1          62 VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMG  141 (197)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTT
T ss_pred             ccCCcceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccc
Confidence            479999999999999999999999999999999999999999999999987543311                    112


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHh-cCCCCCCeEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRR-ANIGPETNVLI  113 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~-~~~~~~~~vlI  113 (290)
                      +|+|+||+++++..++++|+++++++||++ ..+.|++.+++. ..-+.+++|||
T Consensus       142 ~GgfAey~vvp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvv  196 (197)
T d2fzwa1         142 TSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVK  196 (197)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEE
T ss_pred             cccceeEEEechHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEe
Confidence            489999999999999999999999999876 478888888865 33457788887

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.78  E-value=1.3e-19  Score=137.68  Aligned_cols=90  Identities=28%  Similarity=0.330  Sum_probs=79.0

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccc--cCCCCCcccceeEeecC--CceE
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPA--DLCF   76 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~--~~~~   76 (290)
                      +|+|||++|+|+++|+++++|++||||.+.+..+|++|.+|..+++++|......  -+...+|+|+||++++.  .+++
T Consensus        55 ~i~GhE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~  134 (177)
T d1jqba1          55 MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLA  134 (177)
T ss_dssp             EECCCCEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCE
T ss_pred             ccCcceeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEE
Confidence            4899999999999999999999999999999999999999999999999877433  22356899999999986  3689


Q ss_pred             ECCCCCChhhhhhh
Q 022879           77 KLPDNVSLEEGAMC   90 (290)
Q Consensus        77 ~~P~~~~~~~aa~~   90 (290)
                      ++|+++++++++..
T Consensus       135 ~iP~~~~~~~~~~~  148 (177)
T d1jqba1         135 ILPKDVDLSKLVTH  148 (177)
T ss_dssp             ECCTTSCGGGGEEE
T ss_pred             ECCCCcchHHHHHH
Confidence            99999998877643

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=3.2e-19  Score=135.83  Aligned_cols=104  Identities=23%  Similarity=0.352  Sum_probs=84.7

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcC-CcCCCCChhhcCCCCCCCCCCccccC-------CCCCcccceeEeecC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFAT-------PPVHGSLANQVVHPA   72 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~e~~~v~~   72 (290)
                      +|+|||++|+|+++|++|+++++||+|.+.+ ...|+.|.+|+.+++|+|++..+...       ...+|+|+||+++++
T Consensus        56 ~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~  135 (179)
T d1uufa1          56 CVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHE  135 (179)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEG
T ss_pred             ccccccccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEech
Confidence            5899999999999999999999999998765 45899999999999999998754322       234699999999999


Q ss_pred             CceEECCCCCChhhhhhhhhhHHHHHHHHhcCCC
Q 022879           73 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG  106 (290)
Q Consensus        73 ~~~~~~P~~~~~~~aa~~~~~~ta~~~l~~~~~~  106 (290)
                      ++++++|+....  ++...++.++++++..+.++
T Consensus       136 ~~~~~ip~~~~~--~~~a~~l~~a~~a~~~a~v~  167 (179)
T d1uufa1         136 RYVLRIRVADIE--MIRADQINEAYERMLRGDVK  167 (179)
T ss_dssp             GGCEECCCCCEE--EECGGGHHHHHHHHHTTCSS
T ss_pred             HHEEECCCCCcC--hhHhchhHHHHHHHHHhCcc
Confidence            999999966432  33345677889888765544

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.77  E-value=1.1e-20  Score=146.67  Aligned_cols=112  Identities=23%  Similarity=0.368  Sum_probs=89.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCC--------------------CC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~   60 (290)
                      +++|||++|+|+++|++++++++||||.+.+..+|+.|.+|..+++++|+.....+..                    ..
T Consensus        63 ~i~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  142 (198)
T d1p0fa1          63 VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMG  142 (198)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTT
T ss_pred             cccceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCC
Confidence            4799999999999999999999999999999999999999999999999976554321                    12


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEECCCHHHH
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGL  121 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~Gag~vG~  121 (290)
                      +|+|+||+.+++..++++|++++...++.. ..+         ..+.+++++||.|+|++|+
T Consensus       143 ~g~faey~~v~~~~~~kip~~~~~~~~~~~~~~~---------~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         143 TSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL---------DQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TCCSBSEEEEETTSEEEECTTSCGGGGEEEEECG---------GGHHHHHHHTTTSSCSEEE
T ss_pred             CccceeeEEecHHHEEECCCCCCHHHHHHhhcch---------hhcCCCCEEEEECCCcceE
Confidence            489999999999999999999987765533 121         1223334566777777664

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.72  E-value=1e-17  Score=129.97  Aligned_cols=112  Identities=21%  Similarity=0.296  Sum_probs=89.2

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccC--------------------CCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPV   60 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~   60 (290)
                      +++|||++|+|+++|++++++++||||.+.+..+|+.|..|..++.++|........                    ...
T Consensus        63 ~i~GHE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~  142 (198)
T d2jhfa1          63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG  142 (198)
T ss_dssp             BCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTT
T ss_pred             eecccceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCC
Confidence            489999999999999999999999999999999999999999999999997654321                    112


Q ss_pred             CcccceeEeecCCceEECCCCCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEEE
Q 022879           61 HGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM  114 (290)
Q Consensus        61 ~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~  114 (290)
                      .|+|+||+++++.+++++|+.++++.++.. .++.......  ..+++|++|+|.
T Consensus       143 ~G~fAEy~~v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         143 TSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             CCcccCeEEeCHHHeEECCCCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            489999999999999999999887665533 2333332222  235678888774

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.2e-17  Score=123.50  Aligned_cols=87  Identities=23%  Similarity=0.368  Sum_probs=75.6

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      .++|||++|+|+++|+++++|++||||++.+                           ..+|+|+||+.+++++++++|+
T Consensus        62 ~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~iP~  114 (150)
T d1yb5a1          62 YTPGSDVAGVIEAVGDNASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPE  114 (150)
T ss_dssp             BCCCSCEEEEEEEECTTCTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCT
T ss_pred             ccCccceeeeeEeecceeeccccCccccccc---------------------------cccccccccccccccccccccC
Confidence            3789999999999999999999999998742                           2469999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHHHHHH-hcCCCCCCeEEEE
Q 022879           81 NVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIM  114 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~~~l~-~~~~~~~~~vlI~  114 (290)
                      ++++++||.++ ...|+++.+. .+....|+++||.
T Consensus       115 ~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         115 KLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            99999999774 6678887764 4778899999873

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=5.8e-17  Score=119.51  Aligned_cols=86  Identities=26%  Similarity=0.331  Sum_probs=72.5

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      .++|||++|+|+++|+++++|++||||+..                           ....|+|+||+.++.+.++++|+
T Consensus        58 ~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~---------------------------~~~~G~~ae~~~v~~~~~~~~P~  110 (147)
T d1qora1          58 SGLGTEAAGIVSKVGSGVKHIKAGDRVVYA---------------------------QSALGAYSSVHNIIADKAAILPA  110 (147)
T ss_dssp             BCCCSCEEEEEEEECTTCCSCCTTCEEEES---------------------------CCSSCCSBSEEEEEGGGEEECCT
T ss_pred             eeeccccccceeeeeeecccccccceeeee---------------------------ccccccceeEEEEehHHeEEcCc
Confidence            378999999999999999999999999752                           12459999999999999999999


Q ss_pred             CCChhhhh--hh-hhhHHHHHHHHhcCCCCCCeEEE
Q 022879           81 NVSLEEGA--MC-EPLSVGVHACRRANIGPETNVLI  113 (290)
Q Consensus        81 ~~~~~~aa--~~-~~~~ta~~~l~~~~~~~~~~vlI  113 (290)
                      +++++.|+  .+ ...+++++++...++++|++|||
T Consensus       111 ~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI  146 (147)
T d1qora1         111 AIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI  146 (147)
T ss_dssp             TSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence            99887554  33 35667777776678999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.50  E-value=2.1e-14  Score=106.11  Aligned_cols=89  Identities=16%  Similarity=0.102  Sum_probs=68.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|+|++|+|++  .+++.|++||+|+......                      ....+|+|+||+.++++.++++|+
T Consensus        62 ~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~----------------------~~~~~G~~aEy~~v~~~~~~~iP~  117 (152)
T d1xa0a1          62 FVPGIDLAGVVVS--SQHPRFREGDEVIATGYEI----------------------GVTHFGGYSEYARLHGEWLVPLPK  117 (152)
T ss_dssp             BCCCSEEEEEEEE--CCSSSCCTTCEEEEESTTB----------------------TTTBCCSSBSEEEECGGGCEECCT
T ss_pred             ceeeeeeeeeeec--cCCCccccCCEEEEecCcc----------------------ccccCCCcceeeeehhhccccCCC
Confidence            4799999999998  5677899999998643211                      124579999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHH-HhcCCCCCCeEEEEC
Q 022879           81 NVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLIMG  115 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~G  115 (290)
                      +++. +||.+ ....|++.++ ...+++ |++|||.|
T Consensus       118 ~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         118 GLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             THHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            9985 56655 4556666655 446665 99999975

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=6.3e-14  Score=89.58  Aligned_cols=71  Identities=14%  Similarity=0.212  Sum_probs=61.0

Q ss_pred             CChhhhhhhh-hhHHHHHHHH----hcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 022879           82 VSLEEGAMCE-PLSVGVHACR----RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  153 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~----~~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  153 (290)
                      +|+++|+.++ ...|||.++.    ....+++++|||+|+ |++|.+++|+++.+|+ .|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            5788999885 6668887653    256789999999987 9999999999999999 58888899999999999884

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.38  E-value=2.6e-16  Score=119.73  Aligned_cols=97  Identities=21%  Similarity=0.167  Sum_probs=79.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|+++|.++.+++.||+|....                           ...|+|+||+.+++++++++|++
T Consensus        75 v~G~e~~g~V~~~~~~~~~~~~g~~v~~~~---------------------------~~~g~~aey~~v~~~~~~~iP~~  127 (175)
T d1gu7a1          75 PCGNEGLFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNP  127 (175)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCH
T ss_pred             ccccccccccccccccccccccccceeccc---------------------------cccccccceeeehhhhccCCCcc
Confidence            579999999999999999999999998642                           34689999999999999999998


Q ss_pred             CChhhhhhhhhhHHHHHHHHh--cCCCCCCeEEEEC-C-CHHHHHHHHH
Q 022879           82 VSLEEGAMCEPLSVGVHACRR--ANIGPETNVLIMG-A-GPIGLVTMLA  126 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta~~~l~~--~~~~~~~~vlI~G-a-g~vG~~ai~l  126 (290)
                      ++.+.++.+ ...|||+++..  .++++|++|||+| + |++|++++|+
T Consensus       128 ~~~~~a~~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         128 AQSKANGKP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             HHHHHTTCS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             chhhhhccc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            875555544 45567777643  6799999999996 4 7799887763

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.37  E-value=2e-13  Score=97.76  Aligned_cols=73  Identities=22%  Similarity=0.251  Sum_probs=62.3

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|+|++|+|           +||+|++..                            .+|+|+||+.+++++++++|+
T Consensus        57 ~v~G~E~~G~V-----------vGd~V~~~~----------------------------~~G~~aey~~v~~~~~~~~P~   97 (131)
T d1iz0a1          57 FIPGMEVVGVV-----------EGRRYAALV----------------------------PQGGLAERVAVPKGALLPLPE   97 (131)
T ss_dssp             BCCCCEEEEEE-----------TTEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCT
T ss_pred             eEeeeeeEEee-----------ccceEEEEe----------------------------ccCccceeeeeCHHHeEEccC
Confidence            47999999999           399998642                            359999999999999999999


Q ss_pred             CCChhhhhhh-hhhHHHHHHHHhcCCCCCCeEEE
Q 022879           81 NVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI  113 (290)
Q Consensus        81 ~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI  113 (290)
                      ++++++||.+ ..+.|||+++.. +-+.|++||+
T Consensus        98 ~~~~~~aa~~~~~~~Ta~~al~~-~g~~g~tvl~  130 (131)
T d1iz0a1          98 GRPVVGPVFPFAEAEAAFRALLD-RGHTGKVVVR  130 (131)
T ss_dssp             TCCCEEEEEEGGGHHHHHHHTTC-TTCCBEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh-cccCCCEEEE
Confidence            9999999977 588899999854 2366888886

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=1.4e-12  Score=95.13  Aligned_cols=73  Identities=22%  Similarity=0.253  Sum_probs=58.8

Q ss_pred             CccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCC
Q 022879            1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD   80 (290)
Q Consensus         1 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~   80 (290)
                      +++|+|++|+|+++|.+  .+++||+|++....                     . +...+|+|+||+++++++++++|+
T Consensus        59 ~v~G~e~~G~V~~~~~~--~~~~g~~v~~~~~~---------------------~-g~~~~G~~Aey~~v~~~~vv~lP~  114 (146)
T d1o89a1          59 MIPGIDFAGTVRTSEDP--RFHAGQEVLLTGWG---------------------V-GENHWGGLAEQARVKGDWLVAMPQ  114 (146)
T ss_dssp             BCCCSEEEEEEEEECST--TCCTTCEEEEECTT---------------------B-TTTBCCSSBSEEEECGGGCEECCT
T ss_pred             eeccccccccceeeccC--CccceeeEEeeccc---------------------c-eecCCCcceeeeeeeeeeEEECCC
Confidence            47899999999998764  69999999864321                     0 124579999999999999999999


Q ss_pred             CCChhhhhhhh-hhHHHH
Q 022879           81 NVSLEEGAMCE-PLSVGV   97 (290)
Q Consensus        81 ~~~~~~aa~~~-~~~ta~   97 (290)
                      ++|+++||+++ ...||+
T Consensus       115 ~ls~~eAA~l~~a~~tA~  132 (146)
T d1o89a1         115 GQAAKEISLSEAPNFAEA  132 (146)
T ss_dssp             TSCCEEECGGGHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            99999999885 334554

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.35  E-value=3.2e-15  Score=111.79  Aligned_cols=91  Identities=22%  Similarity=0.270  Sum_probs=70.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCC
Q 022879            2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN   81 (290)
Q Consensus         2 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~   81 (290)
                      ++|+|++|+|++  +.++++++||+|+.....-                      +...+|+|+||+.+++++++++|++
T Consensus        63 ~~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~----------------------g~~~~G~~aey~~v~~~~l~~iP~~  118 (162)
T d1tt7a1          63 ILGIDAAGTVVS--SNDPRFAEGDEVIATSYEL----------------------GVSRDGGLSEYASVPGDWLVPLPQN  118 (162)
T ss_dssp             ECCSEEEEEEEE--CSSTTCCTTCEEEEESTTB----------------------TTTBCCSSBSSEEECGGGEEECCTT
T ss_pred             eeeeeccccccc--ccccccccceeeEeeeccc----------------------eeccccccceEEEecHHHEEECCCC
Confidence            689999999998  5667899999998743211                      1245799999999999999999999


Q ss_pred             CChhhhhhhh-hhHHHHHHHHhcCCCCCCeEEEECC
Q 022879           82 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA  116 (290)
Q Consensus        82 ~~~~~aa~~~-~~~ta~~~l~~~~~~~~~~vlI~Ga  116 (290)
                      +++++||.++ ...|+|.++...+...+++|||+|+
T Consensus       119 ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli~ga  154 (162)
T d1tt7a1         119 LSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRI  154 (162)
T ss_dssp             CCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            9999999875 5556776654334455577888766

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.59  E-value=1.2e-07  Score=68.31  Aligned_cols=77  Identities=9%  Similarity=-0.047  Sum_probs=55.6

Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCChhhcCCCCCCCCCCccccCCCCCcccceeEeecCCceEECCCCC
Q 022879            3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV   82 (290)
Q Consensus         3 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~   82 (290)
                      +..+++|+|++  ++.++|++||+|++                               .++|+||.+++.+.+.++|+..
T Consensus        63 ~~g~~vg~Vv~--S~~~~f~~GD~V~g-------------------------------~~gw~ey~v~~~~~l~kv~~~~  109 (147)
T d1v3va1          63 MMGQQVARVVE--SKNSAFPAGSIVLA-------------------------------QSGWTTHFISDGKGLEKLLTEW  109 (147)
T ss_dssp             CCCCEEEEEEE--ESCTTSCTTCEEEE-------------------------------CCCSBSEEEECSSSCEECCTTC
T ss_pred             cccceEEEEEE--eCCCcccCCCEEEE-------------------------------ccCCEeEEEeccceeeEccccc
Confidence            34578899987  67789999999985                               3779999999999999998765


Q ss_pred             Chh-----hhhhh-hhhHH-HHHHHHhcCCCCCCeEEE
Q 022879           83 SLE-----EGAMC-EPLSV-GVHACRRANIGPETNVLI  113 (290)
Q Consensus        83 ~~~-----~aa~~-~~~~t-a~~~l~~~~~~~~~~vlI  113 (290)
                      +..     ..+.+ .+..| ||..+. ...+.|++||+
T Consensus       110 ~~~~~~~~~~~~lG~~Gmtaay~gl~-~~~k~Getvv~  146 (147)
T d1v3va1         110 PDKKIQYHEHVTKGFENMPAAFIEML-NGANLGKAVVT  146 (147)
T ss_dssp             CTTSSCCCEEEEECGGGHHHHHHHHH-TTCCSSEEEEE
T ss_pred             cccccchhhhHhccccchHHHHHHhh-CCCCCCCEEEe
Confidence            433     22233 24444 554553 34577999987

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.26  E-value=1.2e-06  Score=63.62  Aligned_cols=97  Identities=19%  Similarity=0.261  Sum_probs=71.6

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +..+|+|.|+|.+|+.|++.|+.+|+ .|.+.+.+.++++.++......+.......+.    +++..    ...|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~----l~~~~----~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAE----IETAV----AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHH----HHHHH----HTCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhhh----HHHhh----ccCcEEEE
Confidence            56899999999999999999999999 79999999999998877542222111122222    33322    24899999


Q ss_pred             ccCCHH------HHHHHHHHhccCCEEEEecc
Q 022879          187 CAGLNK------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~------~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ++-.+.      .-...++.+++++.++++.-
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            875431      24578899999999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.10  E-value=3.2e-05  Score=60.54  Aligned_cols=105  Identities=23%  Similarity=0.214  Sum_probs=74.0

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      =+|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+..++++... +..+-. .++..+.+++..+.. +++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~-G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAF-FQVDLEDERERVRFVEEAAYAL-GRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEE-EECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeE-EEEeCCCHHHHHHHHHHHHHhc-CCCCe
Confidence            36899999987 9999999999999999 6888999998888888887653 333322 233444444444333 47999


Q ss_pred             EEEccCCH----------H---------------HHHHHHHHhcc--CCEEEEeccC
Q 022879          184 SFDCAGLN----------K---------------TMSTALGATCA--GGKVCLVGMG  213 (290)
Q Consensus       184 vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~  213 (290)
                      +++++|..          +               ..+.++..|++  +|+++.++..
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~  136 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV  136 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc
Confidence            99998752          1               23335566644  5899988753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.10  E-value=8.1e-06  Score=59.94  Aligned_cols=101  Identities=21%  Similarity=0.283  Sum_probs=73.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCc------------------ccHHH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL------------------QDIAE  168 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~------------------~~~~~  168 (290)
                      +..+|+|.|+|.+|+.|++.|+.+|+ .|.+.+.+.++++.+++++...+.......                  ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            56799999999999999999999999 799999999999999999865542100000                  01112


Q ss_pred             HHHHHHHHhCCCccEEEEccCCHH------HHHHHHHHhccCCEEEEecc
Q 022879          169 EVEKIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .+.+    .-...|+||-++-.+.      .-..+++.|++++.+|++.-
T Consensus       107 ~l~~----~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         107 AVLK----ELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHH----HHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHH----HHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence            2222    1246899999874431      34578899999999999874

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.89  E-value=1.4e-05  Score=61.10  Aligned_cols=105  Identities=21%  Similarity=0.276  Sum_probs=73.3

Q ss_pred             HHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHH
Q 022879           97 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVE  171 (290)
Q Consensus        97 ~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~  171 (290)
                      ..+++...+++|++||-.|+|+ |..++.+++..|.. .|++++.+++..+.++.    .+...+........+   .  
T Consensus        65 a~~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~---~--  138 (213)
T d1dl5a1          65 ALFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY---G--  138 (213)
T ss_dssp             HHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C--
T ss_pred             HHHHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH---c--
Confidence            3456778899999999999877 88888899987643 69999999988777654    343332221111111   0  


Q ss_pred             HHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          172 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       172 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                       +  .....||+|+.+.+.....+.+++.|+|+|+++..
T Consensus       139 -~--~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         139 -V--PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             -C--GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             -c--ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence             0  12357999998877654556788999999999873

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.84  E-value=1.1e-05  Score=61.66  Aligned_cols=105  Identities=19%  Similarity=0.221  Sum_probs=74.5

Q ss_pred             HHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCc-ccHHHH
Q 022879           95 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNL-QDIAEE  169 (290)
Q Consensus        95 ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~-~~~~~~  169 (290)
                      +...+++...++++++||..|+|+ |..++-+++..|. .|++++.+++-.+.+    +.++.+.+.....+. ..+   
T Consensus        66 ~~a~ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~---  140 (215)
T d1jg1a_          66 MVAIMLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF---  140 (215)
T ss_dssp             HHHHHHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---
T ss_pred             hHHHHHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC---
Confidence            333456677899999999999876 8888888888786 589999987655544    456755444322211 111   


Q ss_pred             HHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          170 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       170 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                            ....+||.|+-+.+.+..-...++.|+++|+++..
T Consensus       141 ------~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         141 ------PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             ------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ------cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence                  13468999988777655556788999999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.83  E-value=0.00046  Score=54.05  Aligned_cols=83  Identities=18%  Similarity=0.286  Sum_probs=55.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.. ..+..+-. .++..+.+++..+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999987 9999999999999999 688888998776543 22   2322 22222222 22333344444333445


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      .+|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d1xq1a_          86 KLDILINNLGA   96 (259)
T ss_dssp             CCSEEEEECCC
T ss_pred             Ccccccccccc
Confidence            69999999986

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.79  E-value=0.00019  Score=56.20  Aligned_cols=105  Identities=17%  Similarity=0.247  Sum_probs=70.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEE-ecCCC-cccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIV-KVSTN-LQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++..... ..+-. .++..+.+++..+ .-+++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR-RLGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH-HHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHH-HhCCCC
Confidence            5789999987 9999999999999999 68888999887664 4567754332 22222 2233333344333 335799


Q ss_pred             EEEEccCCH----------H---------------HHHHHHHHhc-cCCEEEEeccC
Q 022879          183 VSFDCAGLN----------K---------------TMSTALGATC-AGGKVCLVGMG  213 (290)
Q Consensus       183 ~vid~~g~~----------~---------------~~~~~~~~l~-~~G~~v~~g~~  213 (290)
                      +++++.|..          +               ..+.++..|+ .+|+++.++..
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            999999862          1               2334566664 46999998753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.73  E-value=0.00011  Score=53.57  Aligned_cols=75  Identities=12%  Similarity=0.153  Sum_probs=57.0

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .+++...+.++++|||.|+|+.+.+++.-++..|++.+..+.++.++.+.+ +.++...+...                 
T Consensus         7 ~~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~-----------------   69 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSL-----------------   69 (167)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCC-----------------
T ss_pred             HHHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcc-----------------
Confidence            356666777889999999999999999999999998888899998887755 44554332110                 


Q ss_pred             hCCCccEEEEccC
Q 022879          177 MGTGIDVSFDCAG  189 (290)
Q Consensus       177 ~~~~~d~vid~~g  189 (290)
                      ....+|++|+|+.
T Consensus        70 ~~~~~DliINaTp   82 (167)
T d1npya1          70 ENQQADILVNVTS   82 (167)
T ss_dssp             TTCCCSEEEECSS
T ss_pred             cccchhhheeccc
Confidence            1245899999976

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=0.00066  Score=52.59  Aligned_cols=110  Identities=23%  Similarity=0.289  Sum_probs=70.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCcc-cHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~~-~~~~~~~~~~~~~~~  179 (290)
                      .|+++||+|+ +++|...+..+...|+ .|+.+++++++.+.+    +..+.. ..+..|-.+. +..+.+++..+ .-+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~-~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA-EIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HcC
Confidence            5889999988 9999999988888899 688899999886644    334433 2333332222 33334444433 345


Q ss_pred             CccEEEEccCCHH-------------------------HHHHHHHHhcc--CCEEEEeccCCCCcc
Q 022879          180 GIDVSFDCAGLNK-------------------------TMSTALGATCA--GGKVCLVGMGHHEMT  218 (290)
Q Consensus       180 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~~~~  218 (290)
                      .+|+++++.|...                         ..+.++..+..  .|+++.++......+
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~  149 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS  149 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC
Confidence            6999999998731                         22235555533  478998886554433

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.71  E-value=0.00024  Score=55.15  Aligned_cols=81  Identities=26%  Similarity=0.355  Sum_probs=58.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++... +..|- ..++..+.+++..+.. +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~-g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHP-VVMDVADPASVERGFAEALAHL-GRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEE-EECCTTCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeE-EEEecCCHHHHHHHHHHHHHhc-CCceE
Confidence            5789999987 9999999999999999 688899998887655 4466543 33332 2334444455544434 46999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      +++++|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999876

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=0.00028  Score=54.75  Aligned_cols=104  Identities=19%  Similarity=0.263  Sum_probs=69.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. ..+..+- ..++..+.+++..+ .-+++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA-EFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH-HTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhc-ccCCcc
Confidence            5789999987 9999999999999999 688889998876644 456533 2222222 22334444444433 335799


Q ss_pred             EEEEccCCHH-------------------------HHHHHHHHh--ccCCEEEEecc
Q 022879          183 VSFDCAGLNK-------------------------TMSTALGAT--CAGGKVCLVGM  212 (290)
Q Consensus       183 ~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~  212 (290)
                      +++++.|...                         ..+.++..|  +.+|+++.++.
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS  137 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS  137 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence            9999987621                         233355555  34699999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=0.00029  Score=54.90  Aligned_cols=82  Identities=22%  Similarity=0.263  Sum_probs=57.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCc-ccHHHHHHHHHHHhCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+. +++....+..|-.+ ++..+.+++..+.. +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            5889999987 9999999999999999 6888999988877654 45543333333222 33334444443333 46999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus        83 lVnnAG~   89 (250)
T d1ydea1          83 VVNNAGH   89 (250)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.60  E-value=0.00036  Score=54.64  Aligned_cols=83  Identities=16%  Similarity=0.252  Sum_probs=57.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCCcc-cHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~~~-~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..+... .+..+-.++ +..+.++++.+..+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999987 9999999999999999 688899998775533    3344332 333333333 333334444444456


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ..|+++++.|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            79999998886

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=0.00045  Score=54.46  Aligned_cols=84  Identities=17%  Similarity=0.112  Sum_probs=54.8

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-----cCCCE-EEecCCCcccHHHHHHHHHHHhC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----IGADN-IVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      =+|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+..     .+... .+..+....+....+.+......
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            36899999988 9999999999999999 68999999988765522     23222 22222222333333322222334


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +..|+++++.|.
T Consensus        91 g~~~~li~nag~  102 (269)
T d1xu9a_          91 GGLDMLILNHIT  102 (269)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCcccccccccc
Confidence            578999988765

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.57  E-value=0.00038  Score=50.18  Aligned_cols=76  Identities=17%  Similarity=0.338  Sum_probs=56.5

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ..--.+.++||.|+|.+|...++.+...|++.+.++.++.++. +++++++.. ...+    +++.+.+        ..+
T Consensus        19 ~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~----~~~~~~l--------~~~   85 (159)
T d1gpja2          19 LGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF----DELVDHL--------ARS   85 (159)
T ss_dssp             HSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHH--------HTC
T ss_pred             hCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc----hhHHHHh--------ccC
Confidence            3345778999999999999999999999998888888887665 466778753 3332    2333222        259


Q ss_pred             cEEEEccCCH
Q 022879          182 DVSFDCAGLN  191 (290)
Q Consensus       182 d~vid~~g~~  191 (290)
                      |+||.|++.+
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999999874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.55  E-value=0.00012  Score=57.00  Aligned_cols=103  Identities=17%  Similarity=0.167  Sum_probs=70.3

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cC-CCEEEecCCCcccHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IG-ADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg-~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      +...++++|++||=.|+|+ |.++..+|++.|.. .|++++.+++..+.+++    ++ ...+-...   .|+.+.    
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~~----  149 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIADF----  149 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTTC----
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeecc----
Confidence            4557899999999999876 77888899887643 79999999998887754    22 22222111   122111    


Q ss_pred             HHHhCCCccEEEEccCC-HHHHHHHHHHhccCCEEEEecc
Q 022879          174 QKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                        ..+..||.||-.... ...+..+.+.|+|+|+++.+..
T Consensus       150 --~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         150 --ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             --CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             --cccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence              134579988754443 3578899999999999998743

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.53  E-value=0.00043  Score=53.72  Aligned_cols=82  Identities=22%  Similarity=0.275  Sum_probs=57.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .+..|- ..++..+.+++..+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh-CCCe
Confidence            5789999987 9999999999999999 688899998887644 5565322 222222 2233444444444333 4699


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999986

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=0.00052  Score=53.21  Aligned_cols=79  Identities=28%  Similarity=0.263  Sum_probs=57.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++....+..+-.++   +.++++.+.- +++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~-g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGSV-GPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTC-CCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHHh-CCceEE
Confidence            6899999987 9999999999999999 688899998886644 5566444444333222   2344444322 579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      +++.|.
T Consensus        81 VnnAg~   86 (244)
T d1pr9a_          81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            999876

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.001  Score=51.82  Aligned_cols=104  Identities=18%  Similarity=0.236  Sum_probs=67.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCE--EEecCC-CcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN--IVKVST-NLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~--~~~~~~-~~~~~~~~~~~~~~~~  177 (290)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +++    +...  .+..|- ..+++.+.+++..+..
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4789999987 9999999999999999 688888998876543 333    2111  122222 2233444444444333


Q ss_pred             CCCccEEEEccCCHH-----------------HHHHHHHHhcc-----CCEEEEecc
Q 022879          178 GTGIDVSFDCAGLNK-----------------TMSTALGATCA-----GGKVCLVGM  212 (290)
Q Consensus       178 ~~~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~  212 (290)
                       +++|++++++|...                 ....++..|.+     +|+++.++.
T Consensus        81 -G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS  136 (254)
T d2gdza1          81 -GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  136 (254)
T ss_dssp             -SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             -CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc
Confidence             47999999998731                 22234555543     488998874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.50  E-value=0.0018  Score=43.53  Aligned_cols=92  Identities=15%  Similarity=0.069  Sum_probs=62.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .|++|||.|+|.+|..-++.+...|+ .+++++...  +...+++. +....+......++            -.+++++
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~-~~i~~~~~~~~~~d------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANE-GMLTLVEGPFDETL------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTT-TSCEEEESSCCGGG------------GTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhc-CCceeeccCCCHHH------------hCCCcEE
Confidence            57899999999999999999999999 466664433  22333332 22222221111222            2468999


Q ss_pred             EEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          185 FDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +-+++.++.-.......++.|.++....
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            9999986555677788888999998753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.50  E-value=0.00013  Score=55.76  Aligned_cols=100  Identities=16%  Similarity=0.177  Sum_probs=69.6

Q ss_pred             HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-C-CC--EEEecCCCcccHHHHHHHH
Q 022879           98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-G-AD--NIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g-~~--~~~~~~~~~~~~~~~~~~~  173 (290)
                      .+++...++++++||-.|+|. |..++.+++. +. .|++++.+++..+.+++. . ..  .++.- +....+       
T Consensus        61 ~ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~-d~~~g~-------  129 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTGI-GYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILG-DGTLGY-------  129 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEES-CGGGCC-------
T ss_pred             HHHHHhhhcccceEEEecCCC-CHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhcccccccccC-chhhcc-------
Confidence            356778899999999999875 7777777776 44 699999999988877663 2 11  12111 111111       


Q ss_pred             HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                        ....+||.|+-+.+.+......++.|+++|+++..
T Consensus       130 --~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         130 --EEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             --GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             --hhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence              12357999988766655566788999999999875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.49  E-value=0.00047  Score=53.82  Aligned_cols=82  Identities=26%  Similarity=0.323  Sum_probs=56.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+- ..++..+.+++..+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence            5789999987 9999999999989999 68888888877664 45566332 222222 2233444444443333 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=0.00071  Score=52.35  Aligned_cols=79  Identities=29%  Similarity=0.229  Sum_probs=56.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++....+..+-.++   +.++++.+. -+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~-~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALGG-IGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTT-CCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHH-cCCCeEE
Confidence            5889999987 9999999999999999 68888888877654 45565444444333222   234444432 3579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      ++++|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.45  E-value=0.00045  Score=54.00  Aligned_cols=82  Identities=26%  Similarity=0.300  Sum_probs=57.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ ..++++.... +..|- ..++..+.+++..+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW-GSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            5789999987 9999999999999999 6888889887765 4566775432 22222 2233444444443333 4799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999985

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00028  Score=54.04  Aligned_cols=104  Identities=16%  Similarity=0.139  Sum_probs=70.6

Q ss_pred             HHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cCC-----C--EEEecCC
Q 022879           96 GVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IGA-----D--NIVKVST  161 (290)
Q Consensus        96 a~~~l~~--~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg~-----~--~~~~~~~  161 (290)
                      ...+++.  ..+++|++||-.|+|+ |..++.+++..|.. .|++++.+++-.+.+++    .+.     .  .+..-+.
T Consensus        63 ~a~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~  141 (224)
T d1i1na_          63 HAYALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG  141 (224)
T ss_dssp             HHHHHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred             HHHHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec
Confidence            3345554  3789999999999876 88888888887643 79999999887766532    121     1  1111010


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                       ...+         .....||.|+-+...+......++.|+++|+++..
T Consensus       142 -~~~~---------~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         142 -RMGY---------AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             -GGCC---------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -cccc---------chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence             0001         12357999998777655567788999999999874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.41  E-value=0.00057  Score=53.42  Aligned_cols=107  Identities=21%  Similarity=0.257  Sum_probs=72.9

Q ss_pred             HHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----c-C--CCEEEecCCCcccHH
Q 022879           96 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----I-G--ADNIVKVSTNLQDIA  167 (290)
Q Consensus        96 a~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----l-g--~~~~~~~~~~~~~~~  167 (290)
                      +-..+...+++||++||=.|+|+ |.+++.||+..|.+ .+++++.+++..+.+++    + +  .+.+....   .+..
T Consensus        85 ~s~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~---~d~~  160 (264)
T d1i9ga_          85 AAQIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV---SDLA  160 (264)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC---SCGG
T ss_pred             HHHHHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe---cccc
Confidence            33345568999999999998877 88899999998754 89999999998887754    2 1  22221111   1111


Q ss_pred             HHHHHHHHHhCCCccEEEEccCC-HHHHHHHHHHhccCCEEEEec
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      +.     ......||.||-.... ...+..+.+.|+|+|+++.+-
T Consensus       161 ~~-----~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         161 DS-----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             GC-----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             cc-----cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            00     0124569977544443 457788999999999999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=0.00037  Score=54.15  Aligned_cols=79  Identities=18%  Similarity=0.315  Sum_probs=55.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+.+.........+...+   +.++.... .-.++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~---~~~~~~~~-~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKK---KQIDQFAN-EVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCH---HHHHHHHH-HCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccc---cccccccc-ccccceeEE
Confidence            5789999987 9999999999999999 6888999988877665544333333333223   33333332 335799999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++.|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99876

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.41  E-value=0.0008  Score=52.63  Aligned_cols=83  Identities=13%  Similarity=0.192  Sum_probs=55.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+... .+..+-.+ ++..+.+++..+..+.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            6889999987 9999999999999999 688889998776543 2   234222 22222222 2333334444333345


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            79999999885

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.41  E-value=0.00014  Score=54.38  Aligned_cols=76  Identities=13%  Similarity=0.247  Sum_probs=52.7

Q ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-c----CC-CEEEecCCCcccHHHHHHHHHHHh
Q 022879          105 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-I----GA-DNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l----g~-~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      -=+|+++||+|+ |++|...++.+...|+ .|+.+++++++.+.+.+ +    .. ....+..    + .+.++++    
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~----   89 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----D-DASRAEA----   89 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----S-HHHHHHH----
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----c-HHHHHHH----
Confidence            348899999987 9999999999999999 68889999887664432 2    21 1222221    1 1233333    


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+++|++|++.|.
T Consensus        90 ~~~iDilin~Ag~  102 (191)
T d1luaa1          90 VKGAHFVFTAGAI  102 (191)
T ss_dssp             TTTCSEEEECCCT
T ss_pred             hcCcCeeeecCcc
Confidence            2569999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.40  E-value=0.00094  Score=52.48  Aligned_cols=82  Identities=24%  Similarity=0.383  Sum_probs=56.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC---CEEEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.   ...+..|- ..++..+.+++..+.. +.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-GK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            6789999987 9999999999999999 688888998876644 44442   22222222 2334444445444434 47


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+++++.|.
T Consensus        83 iD~lVnnAG~   92 (268)
T d2bgka1          83 LDIMFGNVGV   92 (268)
T ss_dssp             CCEEEECCCC
T ss_pred             cceecccccc
Confidence            9999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.39  E-value=0.001  Score=52.97  Aligned_cols=82  Identities=15%  Similarity=0.189  Sum_probs=54.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-----HHcCCC-EEEecCCCccc-HHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-----KEIGAD-NIVKVSTNLQD-IAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-----~~lg~~-~~~~~~~~~~~-~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+..     ++.+.. ..+..+-.+.+ ..+.+... ....
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~-~~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL-IKVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH-HHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh-hhhc
Confidence            5799999987 9999999999999999 688898988765422     233433 23333332332 22223333 2345


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|+++++.|.
T Consensus       102 g~iDilvnnAg~  113 (294)
T d1w6ua_         102 GHPNIVINNAAG  113 (294)
T ss_dssp             CSCSEEEECCCC
T ss_pred             cccchhhhhhhh
Confidence            689999999886

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.39  E-value=0.00027  Score=55.14  Aligned_cols=95  Identities=21%  Similarity=0.281  Sum_probs=63.3

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      ..++|++||=.|+|+ |..++.+++ +|+ +|++++.+++..+.+++    .+....+.    ..+..+.      ....
T Consensus       117 ~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~----~~d~~~~------~~~~  183 (254)
T d2nxca1         117 HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL----EGSLEAA------LPFG  183 (254)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE----ESCHHHH------GGGC
T ss_pred             hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEE----ecccccc------cccc
Confidence            367899999998865 666666554 687 69999999998887754    34322211    1222211      1346


Q ss_pred             CccEEEEccCCH---HHHHHHHHHhccCCEEEEec
Q 022879          180 GIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       180 ~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .||+|+.+....   ..++.+.+.|+|+|+++..|
T Consensus       184 ~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         184 PFDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccchhhhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            799998765532   23456778899999998765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.37  E-value=0.00047  Score=53.18  Aligned_cols=101  Identities=26%  Similarity=0.303  Sum_probs=61.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHH-HHHHHH-hCCCccE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKIQKA-MGTGIDV  183 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~d~  183 (290)
                      +|++|||+|+ +++|.+.++.+...|+ .|+.++..+.+..     .............+..+.+ .+..+. ...++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999988 9999999999999999 6777766554321     1111111111111212222 222222 3456999


Q ss_pred             EEEccCCH-----------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          184 SFDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       184 vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +++++|..           +               ..+.++..++++|+++.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            99998741           1               222366677888999998753

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00056  Score=54.03  Aligned_cols=103  Identities=24%  Similarity=0.309  Sum_probs=63.7

Q ss_pred             CCeE-EEECC-CHHHHHHHH-HHHHCCCCeEEEEeCChhHHHHH-HH---cCC-CEEEecCCCc-ccHHHHHHHHHHHhC
Q 022879          108 ETNV-LIMGA-GPIGLVTML-AARAFGAPRIVIVDVDDYRLSVA-KE---IGA-DNIVKVSTNL-QDIAEEVEKIQKAMG  178 (290)
Q Consensus       108 ~~~v-lI~Ga-g~vG~~ai~-la~~~g~~~vv~v~~~~~~~~~~-~~---lg~-~~~~~~~~~~-~~~~~~~~~~~~~~~  178 (290)
                      |.+| ||+|+ +++|.+.++ |++.-|+ .|+.+++++++.+.+ ++   .+. ...+..|-.+ ++..+.++++.+.. 
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            6777 67787 999998876 5566688 688888998876543 22   332 2233333222 23333334443333 


Q ss_pred             CCccEEEEccCCH----------H---------------HHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +++|++|++.|..          +               ..+.++..|++.|+++.++.
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            4799999999862          0               12234556677899998864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00092  Score=52.20  Aligned_cols=82  Identities=24%  Similarity=0.367  Sum_probs=56.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcC-CCEEE--ecC-CCcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIG-ADNIV--KVS-TNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg-~~~~~--~~~-~~~~~~~~~~~~~~~~~  177 (290)
                      +++++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..+ ...++  ..+ ...++..+.+.+..+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999987 9999999999999999 688888998876643    2233 22222  222 22344444555554434


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|+++++.|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             569999999976

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.33  E-value=0.00093  Score=51.98  Aligned_cols=82  Identities=18%  Similarity=0.199  Sum_probs=55.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC---CEEEecCCCc-ccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~  180 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.   -..+..|-.+ ++..+.+++..+.. ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            5789999987 9999999999999999 688888988877654 34431   1223222222 23333444444333 47


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999976

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.32  E-value=0.0012  Score=51.29  Aligned_cols=104  Identities=14%  Similarity=0.267  Sum_probs=68.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-----HHHcCCCE-EEecCC-CcccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-----~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.     .+..|... .+..+- ..++..+.+++..+.. 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4789999987 9999999999999999 68888888776542     23445432 222222 2233444444443333 


Q ss_pred             CCccEEEEccCCH----------H---------------HHHHHHHHhc--cCCEEEEecc
Q 022879          179 TGIDVSFDCAGLN----------K---------------TMSTALGATC--AGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~  212 (290)
                      +++|++++++|..          +               ..+.++..|+  .+|+++.++.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            4799999999862          1               2334666664  3589999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.32  E-value=0.00072  Score=53.44  Aligned_cols=82  Identities=22%  Similarity=0.277  Sum_probs=56.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+- ..++..+.+.+..+.. +.+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARF-GKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHh-CCcc
Confidence            5899999987 9999999999999999 68889999888654 45566332 222222 2233334444443333 5799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +++++.|.
T Consensus        82 ilvnnAG~   89 (276)
T d1bdba_          82 TLIPNAGI   89 (276)
T ss_dssp             EEECCCCC
T ss_pred             cccccccc
Confidence            99999873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00084  Score=52.36  Aligned_cols=82  Identities=17%  Similarity=0.267  Sum_probs=55.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCc-ccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..|.. ..+..+-.+ ++..+.+++..+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            6889999987 9999999999999999 688888888775543    344533 223333222 23333334443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            69999999876

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.29  E-value=0.0012  Score=51.73  Aligned_cols=107  Identities=18%  Similarity=0.221  Sum_probs=74.6

Q ss_pred             HHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHH
Q 022879           96 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEV  170 (290)
Q Consensus        96 a~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~  170 (290)
                      +-+.+...++++|++||=.|+|+ |.+++.+|+..|.. .+++++.+++..+.+++    ++....+.....  +...  
T Consensus        92 ~~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~--d~~~--  166 (266)
T d1o54a_          92 SSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR--DISE--  166 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC--CGGG--
T ss_pred             HHHHHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec--cccc--
Confidence            44456678999999999999877 78888999988643 79999999998887754    453222211111  1110  


Q ss_pred             HHHHHHhCCCccEEEEccCCH-HHHHHHHHHhccCCEEEEec
Q 022879          171 EKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       171 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  211 (290)
                          ......+|.|+-....+ ..+..+.+.|+|+|+++.+.
T Consensus       167 ----~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         167 ----GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ----CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ----cccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence                01345688877666553 57889999999999999774

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.28  E-value=0.0015  Score=51.05  Aligned_cols=82  Identities=27%  Similarity=0.406  Sum_probs=55.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  179 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..|... .+..|- ..++..+.+++..+.. +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5889999987 9999999999999999 688899998876644    3344332 222222 2233444444443333 4


Q ss_pred             CccEEEEccCC
Q 022879          180 GIDVSFDCAGL  190 (290)
Q Consensus       180 ~~d~vid~~g~  190 (290)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            69999999874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.26  E-value=0.00042  Score=54.12  Aligned_cols=105  Identities=19%  Similarity=0.150  Sum_probs=62.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEE--EecCCC-c-ccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNI--VKVSTN-L-QDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~--~~~~~~-~-~~~~~~~~~~~~~~  177 (290)
                      +|+++||+|+ +++|.+.+..+...|++ ++.+.+..++.+.+.+    .+...+  +..+-. + +++.+.+.+..+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~-vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLK-NFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCS-EEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5889999987 99999999999999996 4445444433333322    232222  222221 2 23444455554444


Q ss_pred             CCCccEEEEccCCHH-----------------HHHHHHHHhc-----cCCEEEEeccC
Q 022879          178 GTGIDVSFDCAGLNK-----------------TMSTALGATC-----AGGKVCLVGMG  213 (290)
Q Consensus       178 ~~~~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~  213 (290)
                       +++|++++++|..+                 ....++..+.     ++|+++.++..
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~  139 (254)
T d1sbya1          83 -KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             -CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEech
Confidence             47999999998631                 2233455553     35888888643

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.25  E-value=0.00051  Score=53.48  Aligned_cols=83  Identities=18%  Similarity=0.223  Sum_probs=55.5

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCC--EEEecCCC-cccHHHHHHHHHHH-hCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGAD--NIVKVSTN-LQDIAEEVEKIQKA-MGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~  181 (290)
                      .++|||+|+ +++|.+.++.+...|+. .|+.+.+++++.+.+++....  .++..+-. .++..+.++++.+. +..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            478999988 99999999888778864 577788888887777665422  23333322 23333444444333 23469


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.22  E-value=0.002  Score=49.86  Aligned_cols=82  Identities=20%  Similarity=0.236  Sum_probs=54.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.++++++  ..+.++.+|... .+..|- +.++..+.+++..+.. +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCC
Confidence            5789999987 9999999999999999 5777776643  334556677442 222222 2233444444443333 479


Q ss_pred             cEEEEccCC
Q 022879          182 DVSFDCAGL  190 (290)
Q Consensus       182 d~vid~~g~  190 (290)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999886

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.22  E-value=0.0026  Score=49.45  Aligned_cols=81  Identities=21%  Similarity=0.252  Sum_probs=54.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCC-CcccHHHHHHHHHHHhCCC
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  180 (290)
                      |+.+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..+... .+..+- ..++..+.+++..+ .-++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~-~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE-RYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH-HhCC
Confidence            677799987 9999999999999999 688888998775543    3345332 222222 22334444444433 3357


Q ss_pred             ccEEEEccCC
Q 022879          181 IDVSFDCAGL  190 (290)
Q Consensus       181 ~d~vid~~g~  190 (290)
                      +|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999876

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.20  E-value=0.0029  Score=49.63  Aligned_cols=104  Identities=21%  Similarity=0.301  Sum_probs=68.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHH----HHHHcCCCEE-EecCC-CcccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLS----VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~----~~~~lg~~~~-~~~~~-~~~~~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.++.+ ++..+    .+++.+.... +..+- ..+++.+.+++..+.. 
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 9999999999999999 56666554 44333    2344554332 22222 2334455555554433 


Q ss_pred             CCccEEEEccCCHH-------------------------HHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLNK-------------------------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +++|+++++.|...                         ..+..+..|...|+.+.++.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            47999999887631                         24456777888899888864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.20  E-value=0.00051  Score=53.58  Aligned_cols=76  Identities=14%  Similarity=0.095  Sum_probs=52.6

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC----CCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      .+.||+|+ +++|.+.++.+...|+ .|+.++++.++.+.++.++    ...+.    ..++..+.+++..+.. +++|+
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~----~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM----SEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC----CCCSHHHHHHHHHHHH-SCCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccC----CHHHHHHHHHHHHHHc-CCCCE
Confidence            37899988 9999999998888999 6888888877766655432    22222    2345555555554434 46999


Q ss_pred             EEEccCC
Q 022879          184 SFDCAGL  190 (290)
Q Consensus       184 vid~~g~  190 (290)
                      ++++.|.
T Consensus        75 LVnNAg~   81 (252)
T d1zmta1          75 LVSNDIF   81 (252)
T ss_dssp             EEEECCC
T ss_pred             EEECCcC
Confidence            9987764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.19  E-value=0.0016  Score=50.00  Aligned_cols=73  Identities=22%  Similarity=0.251  Sum_probs=50.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      +++++||+|+ +++|.+.++.+...|+ .|+.+++++++.   ++.+...+. .+ -....    +++.+. -+.+|+++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~-~D-v~~~~----~~~~~~-~g~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CD-LRKDL----DLLFEK-VKEVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CC-TTTCH----HHHHHH-SCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEE-cc-hHHHH----HHHHHH-hCCCcEEE
Confidence            5789999987 9999999999999999 688888887654   455543322 22 12222    222222 25699999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      +++|.
T Consensus        72 nnAG~   76 (234)
T d1o5ia_          72 LNAGG   76 (234)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.19  E-value=0.002  Score=49.68  Aligned_cols=106  Identities=20%  Similarity=0.248  Sum_probs=70.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .|+++||+|+ +++|.+.++-+...|+ .|+.+++++++.+ ..++++.... +..+- ..++..+.+++..+.. +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence            6889999987 9999999999999999 6888889888765 4456775432 22222 2233333344443323 4799


Q ss_pred             EEEEccCCHH-------------------------HHHHHHHHhccCCEEEEeccCC
Q 022879          183 VSFDCAGLNK-------------------------TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       183 ~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +++++.|...                         ..+..+..+..++.++..+...
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            9999887531                         2233556667778777766543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.18  E-value=0.0017  Score=51.07  Aligned_cols=82  Identities=21%  Similarity=0.295  Sum_probs=54.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC--C--EEEecCCC-cccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGA--D--NIVKVSTN-LQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~--~--~~~~~~~~-~~~~~~~~~~~~~~  176 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    ++.+.  .  ..+..|-. .++..+.+++..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 688889998876544    22332  1  12222222 23344444444433


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        82 ~-G~iDilVnnAG~   94 (274)
T d1xhla_          82 F-GKIDILVNNAGA   94 (274)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCceEEEeeccc
Confidence            3 479999999874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.18  E-value=0.0021  Score=50.94  Aligned_cols=100  Identities=15%  Similarity=0.195  Sum_probs=68.6

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++.+++++|++||=.|+|- |..+..+|+..|+ .+++++.+++..+.++    ..|....+....  .++.        
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~~--------  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGWE--------  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCGG--------
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hccc--------
Confidence            4568999999999998764 4467889998999 7999999998866654    345332222111  1210        


Q ss_pred             HhCCCccEEEE-----ccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFD-----CAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...+.||.|+.     .++.          +..+..+.+.|+|+|+++.-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            12457998864     3332          246778999999999998643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.17  E-value=0.0016  Score=50.74  Aligned_cols=82  Identities=26%  Similarity=0.359  Sum_probs=54.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----Hc-CCCEEE--ecCC-CcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EI-GADNIV--KVST-NLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~l-g~~~~~--~~~~-~~~~~~~~~~~~~~~~  177 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+.    .. +...++  ..|- ..++..+.+++..+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5789999987 9999999999999999 6888989988765432    12 222222  2222 2334444444443333


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|+++++.|.
T Consensus        82 -G~iDiLVnnAG~   93 (258)
T d1iy8a_          82 -GRIDGFFNNAGI   93 (258)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             469999999874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.17  E-value=0.0018  Score=50.33  Aligned_cols=82  Identities=13%  Similarity=0.294  Sum_probs=53.6

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcc-cHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    +..+....+..+-.++ +..+.+++..+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            5789999997 5  799999998888899 577777776654433    3344444444333333 3333344433333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.0024  Score=50.84  Aligned_cols=83  Identities=18%  Similarity=0.220  Sum_probs=54.7

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc--------CCCE-EEecCC-CcccHHHHHHHH
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI--------GADN-IVKVST-NLQDIAEEVEKI  173 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l--------g~~~-~~~~~~-~~~~~~~~~~~~  173 (290)
                      =+|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +++        +... .+..+- ..++..+.+++.
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            37899999987 9999999999999999 688888988775533 222        2111 122222 223344444444


Q ss_pred             HHHhCCCccEEEEccCC
Q 022879          174 QKAMGTGIDVSFDCAGL  190 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~  190 (290)
                      .+.. +++|+++++.|.
T Consensus        89 ~~~~-G~iDiLVnnAg~  104 (297)
T d1yxma1          89 LDTF-GKINFLVNNGGG  104 (297)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHHh-CCeEEEEeeccc
Confidence            3333 469999999875

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.16  E-value=0.0012  Score=52.01  Aligned_cols=82  Identities=24%  Similarity=0.306  Sum_probs=54.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCC--C--EEEecCC-CcccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGA--D--NIVKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~--~--~~~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+.    +.+.  .  ..+..|- ..++..+.+++..+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 6888999988766442    2221  1  1222222 223343444444333


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        83 ~-g~iDilvnnAG~   95 (272)
T d1xkqa_          83 F-GKIDVLVNNAGA   95 (272)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             h-CCceEEEeCCcc
Confidence            3 469999999875

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.15  E-value=0.003  Score=49.21  Aligned_cols=82  Identities=21%  Similarity=0.258  Sum_probs=52.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH-----HHcCCCEE-EecCC-CcccHHHHHHHHHHHh
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-----KEIGADNI-VKVST-NLQDIAEEVEKIQKAM  177 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~-----~~lg~~~~-~~~~~-~~~~~~~~~~~~~~~~  177 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.++++ +++.+.+     +..+.... +..|- ..++..+.+++..+..
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5789999987 9999999998889999 68887775 3443322     22343322 22222 2233344444443333


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                       +++|++++++|.
T Consensus        82 -G~iDiLVnnAG~   93 (260)
T d1x1ta1          82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEeeccc
Confidence             469999999986

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.14  E-value=0.0054  Score=42.27  Aligned_cols=74  Identities=22%  Similarity=0.276  Sum_probs=54.3

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|+|.|.|.+|...++.+...|. .|++++.++++.+.++. ++.. ++.-+..+.+   .+++   .+-...|.++-++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~---~l~~---~~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTKIK---TLED---AGIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTSHH---HHHH---TTTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccchh---hhhh---cChhhhhhhcccC
Confidence            58999999999999999999998 69999999999887754 5543 3332222222   2322   2446799999998


Q ss_pred             CCH
Q 022879          189 GLN  191 (290)
Q Consensus       189 g~~  191 (290)
                      +.+
T Consensus        74 ~~d   76 (132)
T d1lssa_          74 GKE   76 (132)
T ss_dssp             SCH
T ss_pred             CcH
Confidence            874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.14  E-value=0.0014  Score=51.28  Aligned_cols=82  Identities=18%  Similarity=0.241  Sum_probs=54.2

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-----HHHcCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-----~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.     .+++|... .+..|-. .++..+.+++..+ .-
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA-DL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-Hh
Confidence            5789999987 9999999999999999 68888887665432     23445332 2222222 2334344444433 34


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            579999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.13  E-value=0.00092  Score=51.41  Aligned_cols=97  Identities=20%  Similarity=0.274  Sum_probs=60.7

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHH----HHHH-HhCCCc
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE----KIQK-AMGTGI  181 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~  181 (290)
                      +.+|||+|+ +++|.+.++.+...|+ .|+.++++++...     .....+..   ..++.+...    .... ...+++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDG---NKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCT---TSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceecc---ccCchhHHHHHHHHHHHHhcCCCe
Confidence            457999988 9999999999999999 6888888765421     11111111   122222221    1111 245679


Q ss_pred             cEEEEccCCH-----------H---------------HHHHHHHHhccCCEEEEeccC
Q 022879          182 DVSFDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       182 d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      |++++++|..           +               ..+..+..|+++|+++.++..
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            9999998741           1               123356677888999998753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.09  E-value=0.0025  Score=49.83  Aligned_cols=82  Identities=22%  Similarity=0.255  Sum_probs=53.7

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCC--C--EEEecCC-CcccHHHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGA--D--NIVKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~--~--~~~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      +|+.+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   ..+.  .  ..+..|- ..++..+.+++..+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 688889998876544 2   2331  1  2222222 223333344444333


Q ss_pred             hCCCccEEEEccCC
Q 022879          177 MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 ~~~~~d~vid~~g~  190 (290)
                      . +++|+++++.|.
T Consensus        83 ~-g~iDilvnnAG~   95 (264)
T d1spxa_          83 F-GKLDILVNNAGA   95 (264)
T ss_dssp             H-SCCCEEEECCC-
T ss_pred             h-CCCCEeeccccc
Confidence            3 579999999874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.08  E-value=0.0017  Score=50.73  Aligned_cols=82  Identities=22%  Similarity=0.268  Sum_probs=52.3

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh-HHH----HHHHcCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLS----VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~----~~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.++++.+ +.+    .++..+... .+..|-. .++..+.+++..+.. 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 9999999998888999 5777776643 332    334455432 2222222 223333344443333 


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|++++++|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            479999999876

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.06  E-value=0.0028  Score=49.13  Aligned_cols=165  Identities=13%  Similarity=0.067  Sum_probs=94.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCC-cccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (290)
                      .++.+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    +..+.. ..+..+-. .++..+.+++..+ .-+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~-~~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT-EHK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH-HCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            4678899987 9999999998888999 688889988876543    334433 22222222 2334444444433 345


Q ss_pred             CccEEEEccCCH----------H---------------HHHHHHHHh--ccCCEEEEeccCCCCcc----ccch------
Q 022879          180 GIDVSFDCAGLN----------K---------------TMSTALGAT--CAGGKVCLVGMGHHEMT----VPLT------  222 (290)
Q Consensus       180 ~~d~vid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~----~~~~------  222 (290)
                      ++|+++++.|..          +               ..+.++..+  ..+|+++.++.......    ..+.      
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal  166 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV  166 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence            799999998762          1               222344444  34699999875321111    1111      


Q ss_pred             ---------hhhccCcEEEEeeec-------CCcHHHHHHHHHcCCCCCCCceeeEeeCChhhHHHHHHHHhcC
Q 022879          223 ---------PAAVREVDVVGVFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG  280 (290)
Q Consensus       223 ---------~~~~~~~~i~~~~~~-------~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  280 (290)
                               .+..+++++....+.       ....++..+.+.+. ..+...    -..  +|+.++...+.+.
T Consensus       167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~-~pl~R~----~~p--edvA~~v~fL~S~  233 (251)
T d2c07a1         167 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN-IPAGRM----GTP--EEVANLACFLSSD  233 (251)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT-CTTSSC----BCH--HHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhc-CCCCCC----cCH--HHHHHHHHHHhCc
Confidence                     022456788777654       22234444444432 111211    124  8888888877654

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.04  E-value=0.00067  Score=51.72  Aligned_cols=103  Identities=17%  Similarity=0.257  Sum_probs=63.8

Q ss_pred             HHHHh--cCCCCCCeEEEECCCHHHHHHHHH---HHHCCC---CeEEEEeCChhHHHHHHH---------cCCCEEEecC
Q 022879           98 HACRR--ANIGPETNVLIMGAGPIGLVTMLA---ARAFGA---PRIVIVDVDDYRLSVAKE---------IGADNIVKVS  160 (290)
Q Consensus        98 ~~l~~--~~~~~~~~vlI~Gag~vG~~ai~l---a~~~g~---~~vv~v~~~~~~~~~~~~---------lg~~~~~~~~  160 (290)
                      .+++.  ..++++++||..|+|+ |..++.+   +...|.   .+|++++.+++-.+.+++         ++...+....
T Consensus        69 ~~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          69 FALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            45554  3789999999998744 4444444   444453   269999998876665532         1211121111


Q ss_pred             CC-cccHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEe
Q 022879          161 TN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       161 ~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      .+ ...+         ....+||.|+-+.+.+..-...++.|+++|+++..
T Consensus       148 ~d~~~~~---------~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 GDGRKGY---------PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             SCGGGCC---------GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccccccc---------ccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            11 1111         12357999988777655556788899999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.04  E-value=0.0033  Score=45.58  Aligned_cols=81  Identities=16%  Similarity=0.240  Sum_probs=53.8

Q ss_pred             HHHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHH
Q 022879           98 HACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus        98 ~~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++++... ..++++|||.|+|+.+.+++.-+..+|+ .+..+.++.++.+.+ +.+.....+..... .+          
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~~----------   74 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM-DE----------   74 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS-GG----------
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccc-cc----------
Confidence            3454433 4578999999999999999999999999 588888988886654 44432111111010 01          


Q ss_pred             HhCCCccEEEEccCC
Q 022879          176 AMGTGIDVSFDCAGL  190 (290)
Q Consensus       176 ~~~~~~d~vid~~g~  190 (290)
                      .....+|++|+|+..
T Consensus        75 ~~~~~~dliIN~Tp~   89 (170)
T d1nyta1          75 LEGHEFDLIINATSS   89 (170)
T ss_dssp             GTTCCCSEEEECCSC
T ss_pred             ccccccceeeccccc
Confidence            123568999999865

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.04  E-value=0.0015  Score=50.99  Aligned_cols=106  Identities=18%  Similarity=0.240  Sum_probs=68.3

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEecCCC-cccHHHHHHHHHHHhC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      -.|+++||+|+ +++|.+.++.+...|+++++...++++..+.    +++.|... .+..+-. .++..+.+++..+.. 
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-
Confidence            46899999987 9999999999999999544444566555433    34456443 2333322 233444444444334 


Q ss_pred             CCccEEEEccCCHH-------------------------HHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGLNK-------------------------TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +++|+++++.|...                         ..+.++..++.+|.++.+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            46999999998631                         34456777778888877754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.01  E-value=0.0045  Score=48.04  Aligned_cols=79  Identities=28%  Similarity=0.349  Sum_probs=51.9

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~d  182 (290)
                      .+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    ++.+... .+..|-.+ ++..+.+++..+. -+++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hCCcc
Confidence            4588987 9999999998888999 688889998876543    3345332 22222222 2333334444333 35799


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.97  E-value=0.0068  Score=46.51  Aligned_cols=104  Identities=17%  Similarity=0.178  Sum_probs=64.6

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCC------eEEEEeCChhHHHHHH----HcCCCE-EEecCC-CcccHHHHHHHHHHH
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAP------RIVIVDVDDYRLSVAK----EIGADN-IVKVST-NLQDIAEEVEKIQKA  176 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~------~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~-~~~~~~~~~~~~~~~  176 (290)
                      .+||+|+ +++|.+.+..+...|++      .++..++++++.+.+.    ..|... .+..|- ..++..+.+++..+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688988 99999999888888885      3777888887766442    234322 222222 223343444444333


Q ss_pred             hCCCccEEEEccCCH----------H---------------HHHHHHHHhc--cCCEEEEeccCC
Q 022879          177 MGTGIDVSFDCAGLN----------K---------------TMSTALGATC--AGGKVCLVGMGH  214 (290)
Q Consensus       177 ~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~  214 (290)
                       -+.+|+++++.|..          +               ..+.++..|+  .+|+++.++...
T Consensus        83 -~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  146 (240)
T d2bd0a1          83 -YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA  146 (240)
T ss_dssp             -TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             -cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence             35799999998862          1               2233555553  468999987533

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0007  Score=50.86  Aligned_cols=96  Identities=25%  Similarity=0.269  Sum_probs=61.0

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .++|+|.|+ |.+|...+..+...|. .|.++.+++++.......+.. ++.-+-  .+.. .+.+..    .+.|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD~--~d~~-~l~~al----~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDV--LQAA-DVDKTV----AGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCT--TSHH-HHHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-cccccc--cchh-hHHHHh----cCCCEEEE
Confidence            468999998 9999999998888898 688888888875533333333 333222  2222 233322    36899999


Q ss_pred             ccCCHH----------HHHHHHHHhccC--CEEEEecc
Q 022879          187 CAGLNK----------TMSTALGATCAG--GKVCLVGM  212 (290)
Q Consensus       187 ~~g~~~----------~~~~~~~~l~~~--G~~v~~g~  212 (290)
                      ++|...          ....+++.++..  .+++.++.
T Consensus        74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            998521          223455555444  47787753

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0013  Score=52.95  Aligned_cols=110  Identities=18%  Similarity=0.225  Sum_probs=70.3

Q ss_pred             HHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cC-----------CCEEEec
Q 022879           96 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IG-----------ADNIVKV  159 (290)
Q Consensus        96 a~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----lg-----------~~~~~~~  159 (290)
                      +-+.+...++++|++||=.|+|+ |.+++.||++.|.+ .|++++.+++..+.+++    ++           .+.+...
T Consensus        87 ~~~Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~  165 (324)
T d2b25a1          87 INMILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  165 (324)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HHHHHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEE
Confidence            33345567899999999999877 88999999998764 79999999988877653    11           1111111


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEccCC-HHHHHHHHHHhccCCEEEEecc
Q 022879          160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..+-.++...+      ....||.||=-+.. ...+..+.+.|+|+|+++.+.+
T Consensus       166 ~~di~~~~~~~------~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P  213 (324)
T d2b25a1         166 HKDISGATEDI------KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  213 (324)
T ss_dssp             ESCTTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ecchhhccccc------CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence            11111111111      13458877643333 2478889999999999998753

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.92  E-value=0.0056  Score=48.28  Aligned_cols=100  Identities=17%  Similarity=0.165  Sum_probs=68.5

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      +++.++++|++||=.|+|- |..++.+++..|+ .|++++.+++..+++++    .|...-+.+.  ..++.        
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~--~~d~~--------  122 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVL--LAGWE--------  122 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEE--ESCGG--------
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHH--Hhhhh--------
Confidence            3558899999999999866 6788899999999 79999999998887754    2311111111  11221        


Q ss_pred             HhCCCccEEEE-----ccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .....||.|+.     .++.   ...+..+.+.|+|+|+++...
T Consensus       123 ~~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         123 QFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             GCCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             cccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            11356888754     4443   245777889999999998643

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.92  E-value=0.0063  Score=46.84  Aligned_cols=101  Identities=16%  Similarity=0.188  Sum_probs=61.9

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH----HHcCCCE-EEecCCCcc-cHHHHHHHHHHHhCCCc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA----KEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~----~~lg~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  181 (290)
                      .+||+|+ +++|.+.++.+...|++ |+.. .+++++.+.+    +..+... .+..|-.++ +..+.+++..+ .-+++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~-V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID-AWGTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH-HSSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHH-HcCCC
Confidence            5788887 99999999999999995 5554 5566554433    3345322 222222222 33333444433 33579


Q ss_pred             cEEEEccCCH----------H---------------HHHHHHHHh--ccCCEEEEecc
Q 022879          182 DVSFDCAGLN----------K---------------TMSTALGAT--CAGGKVCLVGM  212 (290)
Q Consensus       182 d~vid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~  212 (290)
                      |+++++.|..          +               ..+.++..|  ..+|+++.++.
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  138 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence            9999998762          1               233355555  45799999875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.0023  Score=49.18  Aligned_cols=76  Identities=18%  Similarity=0.205  Sum_probs=51.9

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+      ..+..+-. .++..+.+++..+.. +++|++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDiL   77 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQ-GPVEVL   77 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHH-SSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCc------eEEEEecCCHHHHHHHHHHHHHhc-CCceEE
Confidence            6789999988 9999999999999999 688888876654321      22222222 233444444444333 479999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      ++++|.
T Consensus        78 VnnAG~   83 (237)
T d1uzma1          78 VSNAGL   83 (237)
T ss_dssp             EEECSC
T ss_pred             Eeeecc
Confidence            999875

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.81  E-value=0.0031  Score=48.33  Aligned_cols=93  Identities=22%  Similarity=0.334  Sum_probs=67.1

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ..++.+||=.|+|. |..+..+++ .|+ .+++++.+++..+.+++-+....+..+.  .++        ....+.||+|
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~--~~l--------~~~~~~fD~i  106 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDL--------PFPSGAFEAV  106 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSC--------CSCTTCEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc--ccc--------ccccccccce
Confidence            55778999889875 888888876 488 6999999999999998876555554322  121        0124679998


Q ss_pred             EEccCC-------HHHHHHHHHHhccCCEEEEe
Q 022879          185 FDCAGL-------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       185 id~~g~-------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +.....       ...+..+.+.|+++|.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            864321       23577888999999988754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.81  E-value=0.0095  Score=43.01  Aligned_cols=96  Identities=9%  Similarity=0.034  Sum_probs=63.3

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +++|||.|+|-+|...++.+...|. .|++++++.++.+.+.. ++...+.. ..  .+......+.    -...|.++.
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~-~~--~~~~~~~~~~----i~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPIS-LD--VNDDAALDAE----VAKHDLVIS   73 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEE-CC--TTCHHHHHHH----HTTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccccccccc-cc--ccchhhhHhh----hhccceeEe
Confidence            5799999999999999999988899 69999999998886654 44333322 11  1112222222    135788888


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEec
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      +............+...+-.++...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          74 LIPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             eccchhhhHHHHHHHhhccceeecc
Confidence            8776444444445556666666554

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.019  Score=46.05  Aligned_cols=106  Identities=14%  Similarity=0.138  Sum_probs=69.7

Q ss_pred             HHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-----------cC----CCEEEecCC
Q 022879           97 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----------IG----ADNIVKVST  161 (290)
Q Consensus        97 ~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----------lg----~~~~~~~~~  161 (290)
                      ..+++..+++++++||=.|+|. |..++++|+..++..+++++.+++..+.++.           +|    .-.++.-+.
T Consensus       141 ~~~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         141 AQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            3456678899999999998876 8888999999999889999999987776643           12    112222122


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEccC--CH---HHHHHHHHHhccCCEEEEec
Q 022879          162 NLQDIAEEVEKIQKAMGTGIDVSFDCAG--LN---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .+.++.+.+        ...|+|+-..-  .+   ..+....+.|+|||+++..-
T Consensus       220 ~~~~~~~~~--------~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSEEWRERI--------ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSHHHHHHH--------HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccc--------CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            222222221        12578874221  12   34566778899999999764

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.76  E-value=0.0035  Score=49.37  Aligned_cols=99  Identities=15%  Similarity=0.243  Sum_probs=67.0

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++..++++|++||=.|+|. |..+..+++..|+ .|++++.+++..+.+++    .+....+...  ..++.        
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~--~~d~~--------  112 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVL--LQGWE--------  112 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEE--ESCGG--------
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhh--hhhhh--------
Confidence            3457899999999998865 4466778888899 79999999999887754    3422111111  11111        


Q ss_pred             HhCCCccEEEE-----ccCC---HHHHHHHHHHhccCCEEEEe
Q 022879          176 AMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       176 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~  210 (290)
                      .....||.|+.     .++.   +..+..+.+.|+|+|+++.-
T Consensus       113 ~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         113 DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            12357898854     3332   24577889999999999864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.75  E-value=0.0062  Score=44.76  Aligned_cols=98  Identities=11%  Similarity=0.040  Sum_probs=65.3

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC------------------EEEecCCCc
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD------------------NIVKVSTNL  163 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~------------------~~~~~~~~~  163 (290)
                      ...+.++.+||..|+|. |..++.||+. |+ .|++++-+++..+.+++....                  ..+.-+  -
T Consensus        15 ~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~   89 (201)
T d1pjza_          15 SLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD--F   89 (201)
T ss_dssp             HHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC--C
T ss_pred             HcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccc--c
Confidence            35689999999999876 7788888875 99 799999999999988763211                  011000  0


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEec
Q 022879          164 QDIAEEVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .++...       ....+|+|++....        ...+..+.+.|+++|+++...
T Consensus        90 ~~l~~~-------~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccc-------cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            111111       12358999884432        235677888999999976544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.75  E-value=0.0056  Score=47.87  Aligned_cols=82  Identities=11%  Similarity=0.148  Sum_probs=53.0

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      +|+++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.++    ..+...+...+.. ..+..+.+.+..+ .-
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-Hc
Confidence            5899999986 5  699999999999999 5888888764333332    2333333332222 2333334444433 34


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      +++|+++++.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            579999998875

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.74  E-value=0.013  Score=42.47  Aligned_cols=90  Identities=17%  Similarity=0.120  Sum_probs=59.3

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE--------ecCCCcccHHHHHHHHHHHhCCC
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV--------KVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      +++.|.|+|.+|.+.+..+...|. .|...++++++.+.++..+.....        .......+..+.+        ..
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--------~~   72 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV--------KD   72 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH--------TT
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh--------cC
Confidence            689999999999999999999999 689999999998888765522211        0000112222222        46


Q ss_pred             ccEEEEccCCHHHHHHH----HHHhccCCEEE
Q 022879          181 IDVSFDCAGLNKTMSTA----LGATCAGGKVC  208 (290)
Q Consensus       181 ~d~vid~~g~~~~~~~~----~~~l~~~G~~v  208 (290)
                      .|++|-++... .....    ...+.++-.++
T Consensus        73 aD~iii~v~~~-~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          73 ADVILIVVPAI-HHASIAANIASYISEGQLII  103 (184)
T ss_dssp             CSEEEECSCGG-GHHHHHHHHGGGCCTTCEEE
T ss_pred             CCEEEEEEchh-HHHHHHHHhhhccCCCCEEE
Confidence            89999999864 33343    34444445444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.73  E-value=0.005  Score=42.50  Aligned_cols=75  Identities=11%  Similarity=0.244  Sum_probs=55.4

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      ++++|.|.|.+|..+++.+...|. .|++++.++++.+.++..+...++ -+..+++.   +++.   +-...|.++-++
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~~---l~~a---~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATEENE---LLSL---GIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCTTCTTH---HHHH---TGGGCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eecccchh---hhcc---CCccccEEEEEc
Confidence            367888999999999999999999 589999999999988887765443 33333333   3222   334588888888


Q ss_pred             CCH
Q 022879          189 GLN  191 (290)
Q Consensus       189 g~~  191 (290)
                      +..
T Consensus        73 ~~~   75 (134)
T d2hmva1          73 GAN   75 (134)
T ss_dssp             CSC
T ss_pred             Cch
Confidence            764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.71  E-value=0.015  Score=45.49  Aligned_cols=99  Identities=16%  Similarity=0.158  Sum_probs=67.5

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEecCCCcccHHHHHHHHH
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ...++++.+||=.|+|. |..+..+++..|+ .|++++.++...+.+++    .|..   .++.-+.  .++        
T Consensus        62 ~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~--~~l--------  129 (282)
T d2o57a1          62 TGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF--LEI--------  129 (282)
T ss_dssp             TTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT--TSC--------
T ss_pred             hcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc--ccc--------
Confidence            36789999999998865 6677888888888 69999999988776654    2321   2222111  111        


Q ss_pred             HHhCCCccEEEEcc-----CC-HHHHHHHHHHhccCCEEEEecc
Q 022879          175 KAMGTGIDVSFDCA-----GL-NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       175 ~~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....+.||+|+-.-     .. ...+..+.+.|+|+|+++....
T Consensus       130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            01235699997632     21 3467889999999999987653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.67  E-value=0.014  Score=41.76  Aligned_cols=85  Identities=19%  Similarity=0.163  Sum_probs=58.1

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|.|.|+|.+|...+..++..|. .|++.++++++.+.+++.+. +...+   .. +   .        -...|+||-|+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~---~~-~---~--------~~~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ---DL-S---L--------LQTAKIIFLCT   65 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES---CG-G---G--------GTTCSEEEECS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeee---ec-c---c--------ccccccccccC
Confidence            58889999999988888888899 68899999999998888884 33221   11 1   1        14579999888


Q ss_pred             CCHHHHHHHHHH----hccCCEEEEec
Q 022879          189 GLNKTMSTALGA----TCAGGKVCLVG  211 (290)
Q Consensus       189 g~~~~~~~~~~~----l~~~G~~v~~g  211 (290)
                      .. ......++.    ++++--++..+
T Consensus        66 p~-~~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          66 PI-QLILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             CH-HHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             cH-hhhhhhhhhhhhhcccccceeecc
Confidence            74 334444443    34445555554

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.63  E-value=0.0066  Score=46.23  Aligned_cols=101  Identities=19%  Similarity=0.186  Sum_probs=66.8

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++.+++++|++||=.|+|. |..+..+++. +. .+++++-++...+.+++    .+...+.-.....+++.        
T Consensus         9 ~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~--------   77 (234)
T d1xxla_           9 IKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP--------   77 (234)
T ss_dssp             HHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--------
T ss_pred             HHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc--------
Confidence            3558899999999999876 7777788775 55 79999999987776643    33221111111111110        


Q ss_pred             HhCCCccEEEEccCC------HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...+.||+|+.+-.-      ...+..+.+.|+|+|+++..-
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            023569999864322      356888999999999988753

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.0088  Score=45.88  Aligned_cols=100  Identities=20%  Similarity=0.230  Sum_probs=68.3

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecC-CCcccHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVS-TNLQDIAEEVEKIQK  175 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~-~~~~~~~~~~~~~~~  175 (290)
                      ...++++|++||=.|+|. |..+..+++..|+ .+++++.+++..+.+++    .|....+.+. ....++         
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~---------   95 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY---------   95 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC---------
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc---------
Confidence            458899999999998765 5677788888898 79999999988776654    3532111111 111111         


Q ss_pred             HhCCCccEEEEcc------CCHHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...+.||+|+-.-      .....+..+.+.|+|+|+++...
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            1346799997531      22457888899999999998753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.0076  Score=44.09  Aligned_cols=49  Identities=14%  Similarity=0.171  Sum_probs=38.4

Q ss_pred             HHHHhcCC-CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879           98 HACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS  146 (290)
Q Consensus        98 ~~l~~~~~-~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~  146 (290)
                      .+++.... -.+.+|||.|+|+.+.+++..+...|++.++.+.+++++.+
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~   56 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFD   56 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHH
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHH
Confidence            34544333 36789999999999999999999999988888888876544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.59  E-value=0.011  Score=46.87  Aligned_cols=103  Identities=21%  Similarity=0.256  Sum_probs=65.1

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC---------hhHHH-HHH---HcCCCEEEecCCCcccHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD---------DYRLS-VAK---EIGADNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~---------~~~~~-~~~---~lg~~~~~~~~~~~~~~~~~~~~  172 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+..+.+         ++..+ ..+   ..+.....+.. ..++..+.+++
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD-SVEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECC-CGGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccc-hHHHHHHHHHH
Confidence            5789999988 9999999999999999 57776433         22222 222   23344444432 23444455555


Q ss_pred             HHHHhCCCccEEEEccCCH----------H---------------HHHHHHHHhc--cCCEEEEecc
Q 022879          173 IQKAMGTGIDVSFDCAGLN----------K---------------TMSTALGATC--AGGKVCLVGM  212 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~  212 (290)
                      ..+. -+++|++++++|..          +               ..+.++..|+  .+|++|.++.
T Consensus        84 ~~~~-~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          84 ALDT-FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHH-TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHH-cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            4433 35799999998862          1               2333555553  4589999875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0095  Score=45.80  Aligned_cols=47  Identities=26%  Similarity=0.331  Sum_probs=38.4

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD  154 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~  154 (290)
                      +|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ ..++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6889999987 9999999999999999 6888888877655 44666643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.56  E-value=0.0053  Score=47.34  Aligned_cols=81  Identities=17%  Similarity=0.231  Sum_probs=50.5

Q ss_pred             CeEEEECC-CHHHHHHHHHHH---HCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCc-ccHHHHHHHHHH-HhC
Q 022879          109 TNVLIMGA-GPIGLVTMLAAR---AFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNL-QDIAEEVEKIQK-AMG  178 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~---~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~-~~~~~~~~~~~~-~~~  178 (290)
                      ++|||+|+ +++|.+.++.+.   ..|+ .|+.+++++++.+.+++    .+.-.++..|-.+ ++..+.++++.. ...
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            57999988 999998876553   3577 68888888877654433    2322333333322 344444444322 234


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      .++|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            579999999874

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.56  E-value=0.0082  Score=45.42  Aligned_cols=102  Identities=20%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHH
Q 022879           99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus        99 ~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      .++.++++++++||=.|+|. |..+..+++. |. .+++++.+++..+.+++    .+...+--.....+++        
T Consensus         7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l--------   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM--------   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC--------
T ss_pred             HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhcccccccccccccccccccc--------
Confidence            34568899999999999874 7777777755 66 69999999987776643    3433221111111111        


Q ss_pred             HHhCCCccEEEEccC-----C-HHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....+.||+|+..-.     . ...+..+.+.|+|+|+++...
T Consensus        76 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          76 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            002356999976432     1 356888999999999999764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.49  E-value=0.013  Score=45.30  Aligned_cols=84  Identities=18%  Similarity=0.259  Sum_probs=52.0

Q ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH----HH---HHHHcCCCE-EEecCCCcccHHHHHHHHH
Q 022879          104 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR----LS---VAKEIGADN-IVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       104 ~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~----~~---~~~~lg~~~-~~~~~~~~~~~~~~~~~~~  174 (290)
                      ..+|+.++||+|+ +++|.+.++.+...|++.++.+.+++.+    .+   .++..|... ++..+-.+.+   .++++.
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~---~~~~~~   81 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE---SVRELL   81 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH---HHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHH---HHHHhh
Confidence            4688899999987 9999999988888899767777665322    22   234455432 2222222222   233333


Q ss_pred             HH--hCCCccEEEEccCC
Q 022879          175 KA--MGTGIDVSFDCAGL  190 (290)
Q Consensus       175 ~~--~~~~~d~vid~~g~  190 (290)
                      ..  ...++|.++++.|.
T Consensus        82 ~~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             HTSCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccccc
Confidence            21  23468999998875

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.42  E-value=0.0061  Score=46.30  Aligned_cols=103  Identities=17%  Similarity=0.132  Sum_probs=69.2

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHc----CCCEEEecCCCcccHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ++...++||++||=.|+|+ |..+..+++..|.. .|++++.+++..+.++..    +....+..+......   .    
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~---~----  137 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE---Y----  137 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG---G----
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccc---c----
Confidence            3446789999999999877 88888999988753 899999999988777543    222222222221111   0    


Q ss_pred             HHhCCCccEEEEccCCH----HHHHHHHHHhccCCEEEEe
Q 022879          175 KAMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  210 (290)
                      ......+|+++..+..+    ..+..+...|+++|.++..
T Consensus       138 ~~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         138 RALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             TTTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            01234688887655432    2567788899999998865

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.42  E-value=0.012  Score=43.96  Aligned_cols=101  Identities=13%  Similarity=0.030  Sum_probs=66.3

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ..++||++||=.|+|+ |..+..+++..+...|++++-+++..+.+++    .+....+..+........       ..-
T Consensus        52 l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-------~~~  123 (209)
T d1nt2a_          52 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-------GIV  123 (209)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-------TTC
T ss_pred             CCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-------ccc
Confidence            6789999999999866 6678888888776689999999988776643    332222222222111110       112


Q ss_pred             CCccEEEEccCCH----HHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFDCAGLN----KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+|+++....-.    ..+..+.+.|+++|.++..-
T Consensus       124 ~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         124 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            3577777654322    25667888999999998763

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00098  Score=51.04  Aligned_cols=99  Identities=14%  Similarity=0.100  Sum_probs=63.6

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC---EEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ..+|.+||-.|+|. |..+..+++..+. .+++++.+++..+.+++....   .+....   .+.......   .....|
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~f  122 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPT---LPDGHF  122 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGG---SCTTCE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---ccccccccc---cccccc
Confidence            46789999998866 6778888887655 799999999999888764311   111111   122111111   134578


Q ss_pred             cEEE-EccCC----------HHHHHHHHHHhccCCEEEEec
Q 022879          182 DVSF-DCAGL----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       182 d~vi-d~~g~----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |.++ |....          ...+..+.+.|+|+|.++.+.
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            8884 54432          125566888999999998653

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.37  E-value=0.042  Score=39.26  Aligned_cols=91  Identities=19%  Similarity=0.112  Sum_probs=63.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|+|.|.|.+|...+.-++..|.. .+++.+.+++..+.+++.+.. ....  .. ..          ......|+|+-|
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~--~~-~~----------~~~~~~dlIila   69 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--SI-AK----------VEDFSPDFVMLS   69 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--CG-GG----------GGGTCCSEEEEC
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhh--hh-hh----------hhcccccccccc
Confidence            689999999999988888888863 689999999999999998843 3221  10 10          012457999998


Q ss_pred             cCCHH---HHHHHHHHhccCCEEEEeccC
Q 022879          188 AGLNK---TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       188 ~g~~~---~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +....   .+......+.++..++.++..
T Consensus        70 ~p~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          70 SPVRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             CCchhhhhhhhhhhccccccccccccccc
Confidence            88533   233455566777777777654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.015  Score=44.84  Aligned_cols=82  Identities=15%  Similarity=0.198  Sum_probs=51.0

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEecCCC-cccHHHHHHHHHHHhC
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTN-LQDIAEEVEKIQKAMG  178 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~  178 (290)
                      .|+++||+|+ +  ++|.+.+..+...|+ .|+.+.++++..+.++    ..+.......+.. ..+......+. ....
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL-GKVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH-HTTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHh-hhcc
Confidence            6899999987 6  688989888889999 5777778776555443    3443333332222 12222222222 2244


Q ss_pred             CCccEEEEccCC
Q 022879          179 TGIDVSFDCAGL  190 (290)
Q Consensus       179 ~~~d~vid~~g~  190 (290)
                      ...|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            678999988754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.027  Score=39.92  Aligned_cols=96  Identities=19%  Similarity=0.269  Sum_probs=68.8

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      ..-.|++++|.|-|-+|...++.++.+|+ +|++++.++-+.-.+..-|.. +.       .+    ++.    -...|+
T Consensus        20 ~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~~----~~a----~~~adi   82 (163)
T d1li4a1          20 VMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------TM----DEA----CQEGNI   82 (163)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CH----HHH----TTTCSE
T ss_pred             ceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-------eh----hhh----hhhccE
Confidence            35589999999999999999999999999 799999988664444333432 21       11    111    245799


Q ss_pred             EEEccCCHHH-HHHHHHHhccCCEEEEeccCCCC
Q 022879          184 SFDCAGLNKT-MSTALGATCAGGKVCLVGMGHHE  216 (290)
Q Consensus       184 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~~  216 (290)
                      ++-++|.... -..-++.|+++..+...|....+
T Consensus        83 vvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~E  116 (163)
T d1li4a1          83 FVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVE  116 (163)
T ss_dssp             EEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTS
T ss_pred             EEecCCCccchhHHHHHhccCCeEEEEeccccce
Confidence            9999997433 34677888888888887755443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.18  E-value=0.011  Score=43.37  Aligned_cols=100  Identities=19%  Similarity=0.227  Sum_probs=65.3

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHHH
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ...+++++++||=.|+|. |..++.+++. +. .|++++.+++..+.+++    +|.. .+-.+.   .+..+..     
T Consensus        27 ~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gda~~~~-----   95 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEAL-----   95 (186)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHH-----
T ss_pred             HhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cchhhcc-----
Confidence            346789999999998754 5556667664 44 79999999988777754    5532 221111   2222221     


Q ss_pred             HhCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .....+|.|+-....   ...+..+.+.|+++|+++...
T Consensus        96 ~~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          96 CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            134679999865443   345777888999999988653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.16  E-value=0.0063  Score=39.10  Aligned_cols=35  Identities=29%  Similarity=0.295  Sum_probs=30.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ++++|+|.|.|..|+++++++...|+ .|.+.+..+
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            57899999999999999999999999 578877644

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.16  E-value=0.024  Score=46.70  Aligned_cols=109  Identities=16%  Similarity=0.077  Sum_probs=71.3

Q ss_pred             HHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-----------C----CCEEEec
Q 022879           95 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-----------G----ADNIVKV  159 (290)
Q Consensus        95 ta~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-----------g----~~~~~~~  159 (290)
                      ....+++..++++++++|=.|+|. |..+.++|+..|+..+++++-++...+.++..           +    .......
T Consensus       204 ~i~~Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         204 FLSDVYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHHHHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHHHHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            355567778999999988888876 88999999999987899999999887776531           1    1111110


Q ss_pred             -CCCcccHHHHHHHHHHHhCCCccEEEEcc--CC---HHHHHHHHHHhccCCEEEEec
Q 022879          160 -STNLQDIAEEVEKIQKAMGTGIDVSFDCA--GL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       160 -~~~~~~~~~~~~~~~~~~~~~~d~vid~~--g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       +....+.   ...    .-..+|+++-..  -.   ...+..+.+.|+|||+++..-
T Consensus       283 ~~f~~~~~---~d~----~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDNNR---VAE----LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTCHH---HHH----HGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhccc---ccc----ccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence             0111111   111    123477887432  11   235667888999999999864

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.02  E-value=0.021  Score=43.34  Aligned_cols=104  Identities=12%  Similarity=0.042  Sum_probs=66.3

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC----CCEEEecCCCcccHHHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ++...+++|++||=.|+|+ |..+..+++......|++++-+++..+.++..-    ....+..+......   ..    
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~~----  138 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE---YA----  138 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG---GT----
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcc---cc----
Confidence            3446789999999999866 777888888754458999999999888776532    22222222211111   00    


Q ss_pred             HhCCCccEEEEccCC----HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAGL----NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g~----~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .....+|+++.....    ...+..+...|+++|.++..-
T Consensus       139 ~~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         139 NIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            112345666665532    224667888999999988763

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.02  E-value=0.01  Score=44.04  Aligned_cols=81  Identities=25%  Similarity=0.304  Sum_probs=59.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      -.|.+|+|.|-|.+|..+++++...|+ ++++.+.+.++.+....++...+ .    .+++          -..+.|+++
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~----~~~~----------~~~~~DI~i   88 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-A----LEDV----------LSTPCDVFA   88 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-C----GGGG----------GGCCCSEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-C----cccc----------ccccceeee
Confidence            378999999999999999999999999 68899999999888888886542 1    1221          235689998


Q ss_pred             EccCCHHHHHHHHHHhc
Q 022879          186 DCAGLNKTMSTALGATC  202 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~  202 (290)
                      =|......-....+.++
T Consensus        89 PcA~~~~I~~~~a~~i~  105 (201)
T d1c1da1          89 PCAMGGVITTEVARTLD  105 (201)
T ss_dssp             ECSCSCCBCHHHHHHCC
T ss_pred             cccccccccHHHHhhhh
Confidence            77654322233444453

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.96  E-value=0.034  Score=41.52  Aligned_cols=93  Identities=16%  Similarity=0.216  Sum_probs=61.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHHHHhCC
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++    .+.. ..+..+.  .++.        ....
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~--~~l~--------~~~~  101 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA--RKLS--------FEDK  101 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT--TSCC--------SCTT
T ss_pred             cCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccccc--cccc--------ccCc
Confidence            57889999999876 7777888874 77 79999999998877754    2321 2222111  1110        1235


Q ss_pred             CccEEEEccCC--------HHHHHHHHHHhccCCEEEEe
Q 022879          180 GIDVSFDCAGL--------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       180 ~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      .+|+|+-...-        ...+..+.+.|+|+|+++..
T Consensus       102 ~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         102 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            79998764332        12577789999999998754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.94  E-value=0.11  Score=36.67  Aligned_cols=90  Identities=13%  Similarity=0.085  Sum_probs=64.1

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      +|-|.|.|.+|...+.-+...|. .|++.++++++.+.+.+.+....       .+..+.+        ...|++|-|+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~--------~~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIA--------EQCDVIITMLP   65 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECCS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHH--------hCCCeEEEEcC
Confidence            47788999999988887777899 68999999999998888776421       1222222        23799999998


Q ss_pred             CHHHHHHH-------HHHhccCCEEEEeccCCC
Q 022879          190 LNKTMSTA-------LGATCAGGKVCLVGMGHH  215 (290)
Q Consensus       190 ~~~~~~~~-------~~~l~~~G~~v~~g~~~~  215 (290)
                      .+......       ...++++-.++.+++...
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~~p   98 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAP   98 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECCCCCH
Confidence            76655543       445566777777766543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.89  E-value=0.065  Score=38.45  Aligned_cols=100  Identities=19%  Similarity=0.167  Sum_probs=62.6

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEE-eC-ChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHH-------HHhCC
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIV-DV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-------KAMGT  179 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v-~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  179 (290)
                      +|.|.|-|-+|...+..+... .. .++++ +. +......+...+.+.....    .+......+..       .....
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAAS----EEFIPRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESS----GGGHHHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccc----ccceeeecccCccccchhhhhhc
Confidence            789999999999888877654 34 45555 32 3345556666665433211    11111111100       00113


Q ss_pred             CccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       180 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++|+|+||+|.......+...+..+-+.|..+...
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            69999999998777778888899999999887654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.84  E-value=0.023  Score=41.98  Aligned_cols=88  Identities=18%  Similarity=0.160  Sum_probs=58.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.+|.|.|.|.+|...+++++.+|+ .|++.+........  ..+..        ..++.+.++        ..|+++-
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~--------~~~l~~~l~--------~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY--------VDSLDDLYK--------QADVISL  102 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB--------CSCHHHHHH--------HCSEEEE
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee--------ecccccccc--------ccccccc
Confidence            57899999999999999999999999 68888765443322  11211        123333332        2688887


Q ss_pred             ccCCHH-----HHHHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK-----TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++...+     .-...++.|+++..+|..+..
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         103 HVPDVPANVHMINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             cCCccccccccccHHHHhhhCCccEEEecCch
Confidence            765322     113567888888888888654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.77  E-value=0.023  Score=45.51  Aligned_cols=104  Identities=23%  Similarity=0.215  Sum_probs=64.3

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      .+++|++||=.++|. |..++..++ .|+..|++++.+++..+.+++    .|....+.+  ...|..+.+..+. ..+.
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~--~~~d~~~~~~~~~-~~~~  216 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKF--IVGSAFEEMEKLQ-KKGE  216 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHH-HTTC
T ss_pred             hcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCcccee--eechhhhhhHHHH-hccC
Confidence            367899998876533 333344444 477789999999998887754    343211111  1234444444432 2457


Q ss_pred             CccEEEEccCC---------------HHHHHHHHHHhccCCEEEEecc
Q 022879          180 GIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       180 ~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .||+|+-....               .+.+..+++.|+|+|.++.+..
T Consensus       217 ~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             CCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            89999863331               1245667788999999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0057  Score=46.53  Aligned_cols=107  Identities=12%  Similarity=0.020  Sum_probs=65.9

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE-------------ecCCCcccH-HH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV-------------KVSTNLQDI-AE  168 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-------------~~~~~~~~~-~~  168 (290)
                      ....++.+||..|+|. |..+..||+ .|+ .|++++.++...+.+++.......             ......-++ ..
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  117 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC  117 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEc
Confidence            4578899999998877 778888876 599 699999999998877553211100             000000000 00


Q ss_pred             HHHHHHHHhCCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEecc
Q 022879          169 EVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      .+.++.......+|+|+++.--        ...+..+.++|+|+|+++....
T Consensus       118 d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         118 SIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             CGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             chhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            0111111134578999986522        2356778899999999876653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.054  Score=42.37  Aligned_cols=78  Identities=19%  Similarity=0.184  Sum_probs=43.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeE--EEEeCChhH----HHHHHHcC---CC-EEEecCCCcccHHHHHHHHHH-Hh
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRI--VIVDVDDYR----LSVAKEIG---AD-NIVKVSTNLQDIAEEVEKIQK-AM  177 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~v--v~v~~~~~~----~~~~~~lg---~~-~~~~~~~~~~~~~~~~~~~~~-~~  177 (290)
                      .+||+|+ +++|.+.+..+...|++.+  ..+.++.++    .+.++++.   .. ..+..+-.+.+   .++++.. ..
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~---~~~~~~~~~~   80 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSK---SVAAARERVT   80 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHH---HHHHHHHTCT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchH---hhhhhhhhcc
Confidence            4577787 9999999998888998633  233333332    22334432   21 22222222222   2222221 23


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      .+.+|+++++.|.
T Consensus        81 ~g~idilvnnag~   93 (285)
T d1jtva_          81 EGRVDVLVCNAGL   93 (285)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             ccchhhhhhcccc
Confidence            4679999998875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.69  E-value=0.034  Score=39.94  Aligned_cols=98  Identities=15%  Similarity=0.133  Sum_probs=59.7

Q ss_pred             HHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC---CCEEEecCCCcccHHHHHHHH
Q 022879           99 ACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG---ADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus        99 ~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      .++..+ ..++++|+|.|+|+.+.+++.-+...+ ..+..+.++.++.+.+ +.+.   .......+.            
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------   74 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------   74 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc------------
Confidence            344433 347889999999999999988777655 5788888998886644 3343   212222110            


Q ss_pred             HHHhCCCccEEEEccCCHHHHH----HHHHHhccCCEEEEecc
Q 022879          174 QKAMGTGIDVSFDCAGLNKTMS----TALGATCAGGKVCLVGM  212 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g~~~~~~----~~~~~l~~~G~~v~~g~  212 (290)
                        ..-..+|++|+|++.. ...    .....++++..++.+-.
T Consensus        75 --~~~~~~diiIN~tp~g-~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          75 --IPLQTYDLVINATSAG-LSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             --CCCSCCSEEEECCCC--------CCCHHHHHHCSCEEESCC
T ss_pred             --ccccccceeeeccccc-ccccccchhhhhhcccceeeeeec
Confidence              0124699999998863 111    12334555666666544

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.60  E-value=0.041  Score=42.46  Aligned_cols=85  Identities=19%  Similarity=0.359  Sum_probs=51.8

Q ss_pred             CCCCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChhHH-H-HHHHcCCCE-EEecCCCc-ccHHHHHHHHHHH-
Q 022879          105 IGPETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRL-S-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKA-  176 (290)
Q Consensus       105 ~~~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~-~-~~~~lg~~~-~~~~~~~~-~~~~~~~~~~~~~-  176 (290)
                      +=.|+++||+|+ |  ++|.+.++-+...|+ .|+.+.++.++. + ..+.++... .+..+-.+ ++..+..+.+.+. 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            346889999985 4  599999988888999 577777776654 3 334455322 22222222 2333333333222 


Q ss_pred             -hCCCccEEEEccCC
Q 022879          177 -MGTGIDVSFDCAGL  190 (290)
Q Consensus       177 -~~~~~d~vid~~g~  190 (290)
                       ..+.+|+++++.|.
T Consensus        82 ~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGF   96 (268)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             ccCCCcceeeecccc
Confidence             23568999999874

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.58  E-value=0.039  Score=42.48  Aligned_cols=80  Identities=16%  Similarity=0.113  Sum_probs=47.1

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHH--HHHHH----cCCCEEEec-C-CCcccHHHHHHHHH---HHh
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL--SVAKE----IGADNIVKV-S-TNLQDIAEEVEKIQ---KAM  177 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~--~~~~~----lg~~~~~~~-~-~~~~~~~~~~~~~~---~~~  177 (290)
                      +.||+|+ +++|.+.++.+...|+ .|+.++++.++.  ++.++    .+....... + ....+..+.++++.   ...
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            5688887 9999999999999999 678887765432  22222    233332211 1 11222223333222   112


Q ss_pred             CCCccEEEEccCC
Q 022879          178 GTGIDVSFDCAGL  190 (290)
Q Consensus       178 ~~~~d~vid~~g~  190 (290)
                      -+.+|++++++|.
T Consensus        82 ~g~iDilvnnAG~   94 (266)
T d1mxha_          82 FGRCDVLVNNASA   94 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCcc
Confidence            2479999999884

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.57  E-value=0.035  Score=39.20  Aligned_cols=96  Identities=23%  Similarity=0.224  Sum_probs=70.4

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      -+-.|++++|.|=|-+|.-.++-++.+|+ +|++++.++-+.-.+.--|. .+.       +    +++.    -...|+
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~-------~----~~~a----~~~aDi   81 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV-------T----LDEI----VDKGDF   81 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC-------C----HHHH----TTTCSE
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC-------c----hhHc----cccCcE
Confidence            35689999999999999999999999999 79999999866443333232 222       1    1221    245799


Q ss_pred             EEEccCCHHH-HHHHHHHhccCCEEEEeccCCCC
Q 022879          184 SFDCAGLNKT-MSTALGATCAGGKVCLVGMGHHE  216 (290)
Q Consensus       184 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~~  216 (290)
                      ++-++|.... -..-++.|+.+..+...|-...+
T Consensus        82 ~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~E  115 (163)
T d1v8ba1          82 FITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDE  115 (163)
T ss_dssp             EEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTS
T ss_pred             EEEcCCCCccccHHHHHHhhCCeEEEeccccchh
Confidence            9999998654 34668889999888888865443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.54  E-value=0.029  Score=42.13  Aligned_cols=73  Identities=16%  Similarity=0.096  Sum_probs=45.6

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .||||+|+ |.+|...++.+...|.+ .++...+++++.+.+.. +.. ++..+.  .+.. .+.+..    .++|.|++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~--~~~~-~~~~~~----~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDI--TDAD-SINPAF----QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCT--TSHH-HHHHHH----TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeee--cccc-cccccc----ccceeeEE
Confidence            58999987 99999999999888865 35566777766553321 222 222221  2222 222221    46899999


Q ss_pred             ccCC
Q 022879          187 CAGL  190 (290)
Q Consensus       187 ~~g~  190 (290)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            8763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.16  E-value=0.15  Score=35.43  Aligned_cols=81  Identities=21%  Similarity=0.259  Sum_probs=54.8

Q ss_pred             eEEEECCCHHHHHHHH-HHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGAGPIGLVTML-AARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~-la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|.+.|+|.+|.+.++ |.++ |...+++.++++++.+.+. +++.... .  . .+.            -...|+||=|
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~~~-~--~-~~~------------v~~~Div~la   64 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVETS-A--T-LPE------------LHSDDVLILA   64 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCEEE-S--S-CCC------------CCTTSEEEEC
T ss_pred             EEEEEcCcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccccc-c--c-ccc------------ccccceEEEe
Confidence            5778899999998877 5555 5447999999998887664 4665432 1  1 111            1247999999


Q ss_pred             cCCHHHHHHHHHHhccCCEEE
Q 022879          188 AGLNKTMSTALGATCAGGKVC  208 (290)
Q Consensus       188 ~g~~~~~~~~~~~l~~~G~~v  208 (290)
                      +- |..+...++-+++.+.++
T Consensus        65 vk-P~~~~~v~~~l~~~~~~v   84 (152)
T d1yqga2          65 VK-PQDMEAACKNIRTNGALV   84 (152)
T ss_dssp             SC-HHHHHHHHTTCCCTTCEE
T ss_pred             cC-HHHHHHhHHHHhhcccEE
Confidence            87 456677666666655544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.13  E-value=0.3  Score=33.89  Aligned_cols=97  Identities=19%  Similarity=0.215  Sum_probs=61.2

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHC--CCCeEEEEeCChhH---HHHHHHcCCCEEEecCCCcccHHHHHHHH--------
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYR---LSVAKEIGADNIVKVSTNLQDIAEEVEKI--------  173 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~--g~~~vv~v~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~--------  173 (290)
                      .++|.|.|+ |++|..+.++.+..  .+ .+++.+....-   .+.++++.+..+...+.   .....+.+.        
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~---~~~~~l~~~~~~~~~~v   77 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP---SLYNDLKEALAGSSVEA   77 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG---GGHHHHHHHTTTCSSEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH---HHHHHHHHHhhhccccc
Confidence            478999998 99999999999875  45 56666555432   33456788877765332   111122211        


Q ss_pred             -------HHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEE
Q 022879          174 -------QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC  208 (290)
Q Consensus       174 -------~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  208 (290)
                             .+.....+|+++.++.+...+...+..++.+-++.
T Consensus        78 ~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~ia  119 (150)
T d1r0ka2          78 AAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVA  119 (150)
T ss_dssp             EESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEE
T ss_pred             ccCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEE
Confidence                   11123457888888766667777777777665544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.02  E-value=0.22  Score=34.93  Aligned_cols=95  Identities=19%  Similarity=0.253  Sum_probs=55.0

Q ss_pred             CeEEEECCCHHHH-HHHHHHHHCCCCeEEEE-eCCh--hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          109 TNVLIMGAGPIGL-VTMLAARAFGAPRIVIV-DVDD--YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       109 ~~vlI~Gag~vG~-~ai~la~~~g~~~vv~v-~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      -++.|.|+|.+|. ..+++.+....-.++++ +++.  ....+.++++.....      .++. .+.+.  ....++|+|
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~------~~~d-~l~~~--~~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGVE-GLIKL--PEFADIDFV   75 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHHH-HHHHS--GGGGGEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc------ccee-eeeec--ccccccCEE
Confidence            4789999999986 56778776533245554 4444  345677888865321      1221 22111  122469999


Q ss_pred             EEccCCHHHHHHH--HHHhccCCEEEEecc
Q 022879          185 FDCAGLNKTMSTA--LGATCAGGKVCLVGM  212 (290)
Q Consensus       185 id~~g~~~~~~~~--~~~l~~~G~~v~~g~  212 (290)
                      |+++....+....  .+.++.+-.++....
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            9998854454443  334555555665553

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.01  E-value=0.008  Score=42.98  Aligned_cols=93  Identities=10%  Similarity=0.055  Sum_probs=54.0

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE-EEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|+|.|+|.+|.+....+...|. .|..+++++++.+.....+... .... ....+..+.+        ..+|++|-++
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~D~iii~v   71 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNE-SLTANDPDFL--------ATSDLLLVTL   71 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEE-EEEESCHHHH--------HTCSEEEECS
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCcccccc-ccccchhhhh--------cccceEEEee
Confidence            68999999999998888888898 6888877776544322222111 0000 0011111111        3589999999


Q ss_pred             CCHH---HHHHHHHHhccCCEEEEecc
Q 022879          189 GLNK---TMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       189 g~~~---~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ....   .+..+...+.++..++.+..
T Consensus        72 ka~~~~~~~~~l~~~~~~~~~Iv~~qN   98 (167)
T d1ks9a2          72 KAWQVSDAVKSLASTLPVTTPILLIHN   98 (167)
T ss_dssp             CGGGHHHHHHHHHTTSCTTSCEEEECS
T ss_pred             cccchHHHHHhhccccCcccEEeeccC
Confidence            8742   22233334455666766643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.94  E-value=0.062  Score=42.58  Aligned_cols=76  Identities=21%  Similarity=0.252  Sum_probs=45.2

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-----ChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-----DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~-----~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .+|||+|+ |-+|...++.+...|. .|++++.     ...+.+.++..+.-..+.-+-.+.   +.+.+..+  +.++|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~---~~l~~~~~--~~~~d   74 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLIT--KYMPD   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHHH--HHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH---HHHHHHHH--hcCCc
Confidence            37999988 9999999998888899 5777752     122333444444333333221111   12332221  23589


Q ss_pred             EEEEccCC
Q 022879          183 VSFDCAGL  190 (290)
Q Consensus       183 ~vid~~g~  190 (290)
                      +||+++..
T Consensus        75 ~Vih~aa~   82 (338)
T d1orra_          75 SCFHLAGQ   82 (338)
T ss_dssp             EEEECCCC
T ss_pred             eEEeeccc
Confidence            99998764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.85  E-value=0.033  Score=44.75  Aligned_cols=45  Identities=16%  Similarity=0.136  Sum_probs=36.5

Q ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH
Q 022879          104 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  149 (290)
Q Consensus       104 ~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  149 (290)
                      -+++|++|||+|+ |-+|...++.+...|. .|+++.++.++.+.++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            4678999999988 9999999988888899 5777778777666543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.85  E-value=0.043  Score=43.71  Aligned_cols=101  Identities=17%  Similarity=0.090  Sum_probs=61.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      ..+|++||=.++|. |..++++++  |+..|++++.+++..+.+++    .|.+.+-.   ...+..+.++.+. ..+..
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~---i~~d~~~~~~~~~-~~~~~  215 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRV---LEANAFDLLRRLE-KEGER  215 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEE---EESCHHHHHHHHH-HTTCC
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcce---eeccHHHHhhhhH-hhhcC
Confidence            34689999886533 333455554  33479999999999887754    44332211   1234444444443 24568


Q ss_pred             ccEEEEccCC---------------HHHHHHHHHHhccCCEEEEecc
Q 022879          181 IDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       181 ~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ||+|+-....               .+.+..+++.|+|+|.++...-
T Consensus       216 fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         216 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            9999753221               1245567888999999988754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.83  E-value=0.016  Score=42.33  Aligned_cols=37  Identities=22%  Similarity=0.448  Sum_probs=31.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      .+++|+|.|+|+.|+.++..+...|++.|.+++.++.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3689999999999999999999999955777766653

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.77  E-value=0.027  Score=44.63  Aligned_cols=102  Identities=17%  Similarity=0.123  Sum_probs=65.4

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEecCC----CcccHHHHHHHHHHHhC
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVST----NLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~----~~~~~~~~~~~~~~~~~  178 (290)
                      ....++|||.|+|. |..+-.+++....+.+.+++-+++-.+.++++-..  ..++ +.    .-.|-.+.++    ...
T Consensus       104 ~~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~-dprv~i~i~Da~~~l~----~~~  177 (312)
T d2b2ca1         104 HPDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS-HPKLDLFCGDGFEFLK----NHK  177 (312)
T ss_dssp             SSSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG-CTTEEEECSCHHHHHH----HCT
T ss_pred             CCCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccC-CCCeEEEEchHHHHHH----hCC
Confidence            45668999998766 55666888877777899999999988888774211  0000 00    0123333333    346


Q ss_pred             CCccEEEEccCC----------HHHHHHHHHHhccCCEEEEecc
Q 022879          179 TGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       179 ~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..||+||--...          .+.+..+.+.|+++|.++.-..
T Consensus       178 ~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         178 NEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             TCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            789999753321          1245667889999999998753

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.72  E-value=0.06  Score=39.36  Aligned_cols=91  Identities=16%  Similarity=0.061  Sum_probs=58.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|.++.|.|.|.+|...+++++.+|. .++..+................       ..++.+.++        ..|+|.-
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~-------~~~l~~ll~--------~sD~v~l  109 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF-------HDSLDSLLS--------VSQFFSL  109 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE-------CSSHHHHHH--------HCSEEEE
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc-------cCCHHHHHh--------hCCeEEe
Confidence            37899999999999999999999999 5777776544333322222211       123333332        2578876


Q ss_pred             ccCCHH-----HHHHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK-----TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +....+     .-...++.|+++..+|..+..
T Consensus       110 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         110 NAPSTPETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             cCCCCchHhheecHHHhhCcCCccEEEecCCc
Confidence            554321     112567788888888877654

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.71  E-value=0.12  Score=40.46  Aligned_cols=99  Identities=23%  Similarity=0.280  Sum_probs=66.3

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC---------CC-EEEecCCCcccHHHHHHHH
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG---------AD-NIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---------~~-~~~~~~~~~~~~~~~~~~~  173 (290)
                      .....++|||.|+|. |..+-++++..+.+.+.+++-+++-.+.++++-         .. .++.     .|-.+.+++ 
T Consensus        77 ~~~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~-----~Da~~~l~~-  149 (290)
T d1xj5a_          77 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI-----GDGVAFLKN-  149 (290)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE-----SCHHHHHHT-
T ss_pred             hCCCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE-----ccHHHHHhh-
Confidence            345668999998765 556668888878778999999999888887642         11 1111     222223322 


Q ss_pred             HHHhCCCccEEEE-ccC---------CHHHHHHHHHHhccCCEEEEec
Q 022879          174 QKAMGTGIDVSFD-CAG---------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       174 ~~~~~~~~d~vid-~~g---------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                        ..++.+|+||- +..         ..+.++.+.+.|+++|.++.-.
T Consensus       150 --~~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         150 --AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             --SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             --ccccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence              23457998864 332         1346788899999999999764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.69  E-value=0.22  Score=33.63  Aligned_cols=30  Identities=23%  Similarity=0.237  Sum_probs=24.4

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEe
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      +|.|+|+ |-+|++..+++...+.+.+..++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            5889997 99999999999999986444443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.69  E-value=0.11  Score=39.35  Aligned_cols=94  Identities=21%  Similarity=0.231  Sum_probs=63.9

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEecCCCcccHHHHHHHHHHH
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .....+.++||=.|+|. |..+..+++ .|+ .+++++.+++..+.+++.    +.. .++.  ..-.++         .
T Consensus        36 ~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~--~d~~~l---------~  101 (251)
T d1wzna1          36 EDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ--GDVLEI---------A  101 (251)
T ss_dssp             HTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE--SCGGGC---------C
T ss_pred             HhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchhee--hhhhhc---------c
Confidence            35667788999999876 777777777 578 699999999888877653    221 2222  111111         1


Q ss_pred             hCCCccEEEEccCC---------HHHHHHHHHHhccCCEEEE
Q 022879          177 MGTGIDVSFDCAGL---------NKTMSTALGATCAGGKVCL  209 (290)
Q Consensus       177 ~~~~~d~vid~~g~---------~~~~~~~~~~l~~~G~~v~  209 (290)
                      -.+.||+|+...+.         ...+..+.+.|+|+|.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            23579998875322         1357789999999999875

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.66  E-value=0.092  Score=40.56  Aligned_cols=97  Identities=19%  Similarity=0.095  Sum_probs=66.6

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      ...++.+||=.|+|. |..+..+++...-..+++++.+++..+.+++-... ..+.-+...-++          ....||
T Consensus        81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~----------~~~sfD  149 (268)
T d1p91a_          81 LDDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF----------SDTSMD  149 (268)
T ss_dssp             SCTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB----------CTTCEE
T ss_pred             cCCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccC----------CCCCEE
Confidence            346778898888866 67777788776323789999999998888764322 222212111111          245699


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCEEEEecc
Q 022879          183 VSFDCAGLNKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       183 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +|+..... ..+..+.+.|+|+|.++...+
T Consensus       150 ~v~~~~~~-~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         150 AIIRIYAP-CKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             EEEEESCC-CCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEeecCCH-HHHHHHHHHhCCCcEEEEEee
Confidence            99976553 578899999999999998754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.66  E-value=0.42  Score=33.45  Aligned_cols=92  Identities=14%  Similarity=0.135  Sum_probs=63.3

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      ++|.+.|.|.+|...+.-+...|. .|.+.++++++.+.+...+....       .+..+.        -...|+++-|+
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-------~~~~e~--------~~~~diii~~v   65 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA-------RSARDA--------VQGADVVISML   65 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC-------SSHHHH--------HTSCSEEEECC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc-------chhhhh--------ccccCeeeecc
Confidence            368888999999987776777798 68899999999988888775432       121111        13578888888


Q ss_pred             CCHHHHHHH-------HHHhccCCEEEEeccCCCC
Q 022879          189 GLNKTMSTA-------LGATCAGGKVCLVGMGHHE  216 (290)
Q Consensus       189 g~~~~~~~~-------~~~l~~~G~~v~~g~~~~~  216 (290)
                      .........       ...+.++-.++.++.....
T Consensus        66 ~~~~~~~~v~~~~~~~~~~l~~g~iiid~st~~p~  100 (162)
T d3cuma2          66 PASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPT  100 (162)
T ss_dssp             SCHHHHHHHHHSTTCHHHHSCTTCEEEECSCCCHH
T ss_pred             cchhhHHHHHhccccccccCCCCCEEEECCCCCHH
Confidence            876554443       3345666677777655443

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.64  E-value=0.25  Score=35.14  Aligned_cols=101  Identities=19%  Similarity=0.195  Sum_probs=59.6

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEE-eCC-hhHHHHHHHcCCCEEEecCCCcccHHH-------HHHHHHHHhCCC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIV-DVD-DYRLSVAKEIGADNIVKVSTNLQDIAE-------EVEKIQKAMGTG  180 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v-~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  180 (290)
                      +|.|.|-|-+|..+++.+...+--.++++ +.+ ......+..++.+...........+..       ...++    ..+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~~   78 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LDE   78 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HHT
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hcC
Confidence            68899999999999987766542245554 322 344445555554432221110000000       00111    136


Q ss_pred             ccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       181 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +|+|+||+|.-.....+-..+..+-+.+..+...
T Consensus        79 vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             CCEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            9999999998766677878888887877776543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.11  Score=40.49  Aligned_cols=99  Identities=20%  Similarity=0.176  Sum_probs=64.8

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC----------CCEEEecCCCcccHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----------ADNIVKVSTNLQDIAEEVEK  172 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg----------~~~~~~~~~~~~~~~~~~~~  172 (290)
                      ......++|||.|+|. |..+-++++..+...+++++-+++-.+.++++-          -..++.     .|-.+.+  
T Consensus        74 ~~~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~-----~Da~~~l--  145 (285)
T d2o07a1          74 CSHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-----GDGFEFM--  145 (285)
T ss_dssp             TTSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHH--
T ss_pred             hhCcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE-----ccHHHHH--
Confidence            3456678999997755 556667888777778999999998888886632          111221     2322333  


Q ss_pred             HHHHhCCCccEEEEccCCH----------HHHHHHHHHhccCCEEEEec
Q 022879          173 IQKAMGTGIDVSFDCAGLN----------KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       173 ~~~~~~~~~d~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g  211 (290)
                        +...+.+|+||--.-.+          +.++.+-+.|+++|.++.-.
T Consensus       146 --~~~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         146 --KQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             --HTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             --hcCCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence              23456899996432211          24666788999999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.53  E-value=0.1  Score=37.78  Aligned_cols=90  Identities=20%  Similarity=0.154  Sum_probs=59.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.++.|.|.|.+|+..+++++.+|+ .|++.++...+... ...+...        .++.+.++        ..|+|.-
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~ell~--------~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDDLLA--------RADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHHHHH--------HCSEEEE
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHHHHh--------hCCEEEE
Confidence            57899999999999999999999999 68888766544332 2233211        12322222        2688877


Q ss_pred             ccCCHH----H-HHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK----T-MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~----~-~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++...+    . -...++.|+++..+|.++...
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~sRG~  137 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAARGG  137 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTT
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEecchh
Confidence            665422    1 125677788888888887543

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.51  E-value=0.42  Score=38.33  Aligned_cols=112  Identities=19%  Similarity=0.326  Sum_probs=71.0

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEecCC-----------------
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVST-----------------  161 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~-----------------  161 (290)
                      +...++++..|+...+|+.|.+.+..|+.+|.+.++++  ..+++|.+.++.+|++-+.....                 
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            34566777776666779999999999999999755555  44568888999999875442100                 


Q ss_pred             -------------CcccHH----HHHHHHHHHhCCCccEEEEccCCHHHHHH---HHHHhccCCEEEEecc
Q 022879          162 -------------NLQDIA----EEVEKIQKAMGTGIDVSFDCAGLNKTMST---ALGATCAGGKVCLVGM  212 (290)
Q Consensus       162 -------------~~~~~~----~~~~~~~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g~  212 (290)
                                   ...++.    ....++.+..+..+|.++-++|+...+.-   .++...+.-+++.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                         000011    11122222234458999999998654444   4444556778877654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.44  E-value=0.077  Score=38.83  Aligned_cols=91  Identities=20%  Similarity=0.249  Sum_probs=57.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|+++.|.|.|.+|...+++++.+|+ .|++.+...... .....+....       .++.+.++        ..|+|.-
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~-------~~l~~ll~--------~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-------STLQDLLF--------HSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-------SSHHHHHH--------HCSEEEE
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc-------cchhhccc--------cCCEEEE
Confidence            57899999999999999999999999 577776654332 2223333211       23322222        2577766


Q ss_pred             ccCCHH-H----HHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK-T----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~-~----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +....+ +    -...++.|+++..++..+...
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG~  143 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARGG  143 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTT
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecCCce
Confidence            554321 1    124667788888888776543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.43  E-value=0.082  Score=41.00  Aligned_cols=37  Identities=16%  Similarity=0.079  Sum_probs=26.4

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS  146 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~  146 (290)
                      .+||+|+ +++|.+.++.+...|++.++...+++++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence            3577787 999999999999999953334445555444

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.41  E-value=0.14  Score=40.53  Aligned_cols=96  Identities=22%  Similarity=0.199  Sum_probs=63.8

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----------CCEEEecCCCcccHHHHHHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-----------ADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      ....++|||.|+|. |..+-++++......+.+++-+++-.+.++++-           -..++.     .|..+.++  
T Consensus        75 ~~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~--  146 (312)
T d1uira_          75 HPEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLE--  146 (312)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHH--
T ss_pred             CCCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhh--
Confidence            45668999998765 556677777766668999999998888776531           011221     34444443  


Q ss_pred             HHHhCCCccEEEE-cc---C---------CHHHHHHHHHHhccCCEEEEe
Q 022879          174 QKAMGTGIDVSFD-CA---G---------LNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       174 ~~~~~~~~d~vid-~~---g---------~~~~~~~~~~~l~~~G~~v~~  210 (290)
                        ..+..+|+||- ..   +         ..+.+..+.+.|+++|.++.-
T Consensus       147 --~~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         147 --RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             --HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             --hcCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence              34678999963 31   2         124567788999999998764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.40  E-value=0.057  Score=44.15  Aligned_cols=31  Identities=29%  Similarity=0.453  Sum_probs=27.0

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      |.+|||+|+ |-+|...+..+...|. .|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            679999988 9999999999999998 688886

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.40  E-value=0.13  Score=39.43  Aligned_cols=82  Identities=12%  Similarity=0.120  Sum_probs=47.4

Q ss_pred             CCCeEEEECC-CHHHHHHHH-HHHH--CCCCeEEEEeCChhHHHHH-HHc----CCCEE--EecCCCcc-cHHHHHHHHH
Q 022879          107 PETNVLIMGA-GPIGLVTML-AARA--FGAPRIVIVDVDDYRLSVA-KEI----GADNI--VKVSTNLQ-DIAEEVEKIQ  174 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~-la~~--~g~~~vv~v~~~~~~~~~~-~~l----g~~~~--~~~~~~~~-~~~~~~~~~~  174 (290)
                      .|+.++|+|+ +++|.+.++ |++.  .|+ .|+.+++++++.+.+ +++    +...+  +..+-.++ +..+.++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4667788888 999987766 5553  588 688888998887654 222    22222  22222222 2222233332


Q ss_pred             HH---hCCCccEEEEccC
Q 022879          175 KA---MGTGIDVSFDCAG  189 (290)
Q Consensus       175 ~~---~~~~~d~vid~~g  189 (290)
                      +.   .+...|+++++.|
T Consensus        84 ~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             HhhhhccCceEEEEeccc
Confidence            21   2346788888765

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.25  E-value=0.097  Score=39.88  Aligned_cols=34  Identities=32%  Similarity=0.408  Sum_probs=28.0

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      +.|||+|+ +++|.+.++.+...|+ .|+.++.+++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            35788987 9999999999999999 5877877643

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.22  E-value=0.12  Score=40.12  Aligned_cols=97  Identities=16%  Similarity=0.123  Sum_probs=66.3

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----C--C---EEEecCCCcccHHHHHHHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-----A--D---NIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----~--~---~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ....++|||.|+|. |..+-.+++..+.+.+.+++-+++-.+.++++-     +  +   .++.     .|-.+.++   
T Consensus        73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l~---  143 (274)
T d1iy9a_          73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHIA---  143 (274)
T ss_dssp             SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHHH---
T ss_pred             cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHHh---
Confidence            45668999998766 557778888878778999999999888876642     1  1   1221     23223332   


Q ss_pred             HHhCCCccEEEEcc-C---------CHHHHHHHHHHhccCCEEEEec
Q 022879          175 KAMGTGIDVSFDCA-G---------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       175 ~~~~~~~d~vid~~-g---------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       ..+..+|+|+--. .         ..+.++.+.+.|+++|.++.-.
T Consensus       144 -~~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         144 -KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             -TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             -hcCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence             3457899996432 1         2356788889999999998754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.019  Score=43.47  Aligned_cols=74  Identities=24%  Similarity=0.380  Sum_probs=43.8

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +.+|||+|+ |-+|...++.+...|. ..+.++++++.+......-..... .|+.. .+++.    +    .-.++|.+
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~-~~~~~----~----~~~~~d~v   84 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK-LDDYA----S----AFQGHDVG   84 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG-GGGGG----G----GGSSCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc-ccccc----c----cccccccc
Confidence            468999998 9999999998877675 468888776543221111111111 12111 11211    1    22579999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      +.++|.
T Consensus        85 i~~~~~   90 (232)
T d2bkaa1          85 FCCLGT   90 (232)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999886

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.15  E-value=0.41  Score=35.75  Aligned_cols=105  Identities=14%  Similarity=0.153  Sum_probs=69.2

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH--
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA--  176 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~--  176 (290)
                      +....++||-.|.+. |..++.+|+++.. ..+++++.+++..+.+++    .|....+.+  ...+..+.+.++...  
T Consensus        56 ~~~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~--~~g~a~~~L~~l~~~~~  132 (227)
T d1susa1          56 KLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDF--REGPALPVLDEMIKDEK  132 (227)
T ss_dssp             HHHTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHHCGG
T ss_pred             HhcCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceee--eehHHHHHHHHHHhccc
Confidence            345678999998744 8888888888742 279999999988777754    454332222  123444555555432  


Q ss_pred             hCCCccEEEEccCC---HHHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+.||.||--...   ..-+..++..|+++|.++.=.
T Consensus       133 ~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         133 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             cCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            24579999654332   245778899999999887643

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.09  E-value=0.19  Score=37.37  Aligned_cols=96  Identities=16%  Similarity=0.174  Sum_probs=61.8

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHH---CCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARA---FGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~---~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .+++.+||=.|+|. |..+..+++.   .++ .+++++.+++..+.+++    .+....+....  .+..       ...
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~--~d~~-------~~~  105 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILC--NDIR-------HVE  105 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEEC--SCTT-------TCC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhcc--chhh-------ccc
Confidence            67889999998865 6666777765   466 79999999998888765    23221111101  1110       012


Q ss_pred             CCCccEEEEccCC--------HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...+|+++-+...        ...+..+.+.|+|+|.++...
T Consensus       106 ~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         106 IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             CCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            2456776553221        246888999999999999864

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.06  E-value=0.12  Score=41.26  Aligned_cols=73  Identities=25%  Similarity=0.340  Sum_probs=43.0

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC----ChhHHHHHHHc---CCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV----DDYRLSVAKEI---GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~----~~~~~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +|||+|+ |-+|+..+..+...|. .|+++++    ........+.+   ... .+..+-  .+. +.+.+..+  ..++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl--~d~-~~l~~~~~--~~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDI--RNE-ALMTEILH--DHAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCT--TCH-HHHHHHHH--HTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeec--CCH-HHHHHHHh--ccCC
Confidence            5899988 9999999999998998 5777753    22222322222   222 222221  222 22333221  2469


Q ss_pred             cEEEEccC
Q 022879          182 DVSFDCAG  189 (290)
Q Consensus       182 d~vid~~g  189 (290)
                      |+||++++
T Consensus        75 d~ViHlAa   82 (338)
T d1udca_          75 DTVIHFAG   82 (338)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999875

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.13  Score=40.55  Aligned_cols=96  Identities=21%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH---HHcC-CCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA---KEIG-ADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~---~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ....++++||-.|+| .|..++.+|+ .|++.|++++.++......   +..+ .+.+........++        ....
T Consensus        31 ~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l--------~~~~  100 (311)
T d2fyta1          31 PHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV--------HLPV  100 (311)
T ss_dssp             GGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS--------CCSC
T ss_pred             cccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh--------cCcc
Confidence            456789999999886 3556665565 4887899999988654322   2333 22221111111111        0123


Q ss_pred             CCccEEEEccCC-----H----HHHHHHHHHhccCCEEE
Q 022879          179 TGIDVSFDCAGL-----N----KTMSTALGATCAGGKVC  208 (290)
Q Consensus       179 ~~~d~vid~~g~-----~----~~~~~~~~~l~~~G~~v  208 (290)
                      ..+|+|+...-.     .    ..+...-+.|+|+|+++
T Consensus       101 ~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         101 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            579999862211     1    12222345789999886

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.99  E-value=0.07  Score=42.78  Aligned_cols=37  Identities=19%  Similarity=0.154  Sum_probs=31.6

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      ++++|||+|+ |-+|...++.+...|. .|.++++.+.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCc
Confidence            5789999988 9999999999999999 58888776543

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.91  E-value=0.094  Score=41.08  Aligned_cols=96  Identities=19%  Similarity=0.193  Sum_probs=63.4

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC---------C-EEEecCCCcccHHHHHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA---------D-NIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---------~-~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ...++|||.|+|. |..+-++++..+.+.+.+++-+++-.+.++++-.         . .++.     .|-.+.+    +
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-----~Da~~~l----~  157 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-----ANGAEYV----R  157 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHG----G
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-----hhHHHHH----h
Confidence            4568999997755 4566678887777789999999988888766321         1 1221     2322333    3


Q ss_pred             HhCCCccEEEE-ccC----------CHHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFD-CAG----------LNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid-~~g----------~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+..||+||- +..          ..+.+..+.+.|+++|.++.-.
T Consensus       158 ~~~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         158 KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            34668999964 321          1235677888999999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.91  E-value=0.055  Score=39.48  Aligned_cols=91  Identities=21%  Similarity=0.161  Sum_probs=60.0

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.++.|.|.|.+|...+++++.+|. .|...++........+..+....       .+    +.++.    ...|+|.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~----l~~~l----~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------AT----REDMY----PVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SS----HHHHG----GGCSEEEE
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CC----HHHHH----Hhccchhh
Confidence            57899999999999999999999999 68888776555555555443221       12    22221    24678766


Q ss_pred             ccCCHH-----HHHHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK-----TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +....+     .-...++.|+++..+|.++..
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecCch
Confidence            554322     123466777777777777643

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.90  E-value=0.23  Score=39.31  Aligned_cols=101  Identities=13%  Similarity=0.068  Sum_probs=63.8

Q ss_pred             CCCCCCeEEEECC--CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH------cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE------IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       104 ~~~~~~~vlI~Ga--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~------lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      .+.+|++||=..+  |+.+..   . ...|++.|+.++.++...+.+++      ++...+-.   ...|..+.++.+..
T Consensus       141 ~~~~g~~VLdlf~~~G~~sl~---a-a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~---i~~d~~~~l~~~~~  213 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFSVA---A-AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQL---VVMDVFDYFKYARR  213 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHHHH---H-HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEE---EESCHHHHHHHHHH
T ss_pred             HhhCCCceeecCCCCcHHHHH---H-HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEE---EEccHHHHHHHHHh
Confidence            4678999998744  555533   2 24688789999999988887753      22221111   12344455555432


Q ss_pred             HhCCCccEEEEccCC---------------HHHHHHHHHHhccCCEEEEecc
Q 022879          176 AMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       176 ~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                       .+..||+||--...               .+.+..++++|+|+|.++....
T Consensus       214 -~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         214 -HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             -TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             -hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence             45689999753221               1356668889999999987653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.83  E-value=0.12  Score=34.43  Aligned_cols=42  Identities=17%  Similarity=0.242  Sum_probs=34.1

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ++.....++++++|.|+|.+|.-.+..++.+|. .+..+...+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            344566788999999999999999999999999 577775543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.79  E-value=0.24  Score=34.44  Aligned_cols=85  Identities=9%  Similarity=0.087  Sum_probs=58.7

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|.+.|+|.+|.+.+.-....|. .+++.++++++.+.+ +++|....       .+..+.+        ...|+||=|+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~--------~~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA-------MSHQDLI--------DQVDLVILGI   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC-------SSHHHHH--------HTCSEEEECS
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee-------chhhhhh--------hccceeeeec
Confidence            57788999999988876666677 678888888876654 66775432       1222222        2479999999


Q ss_pred             CCHHHHHHHHHHhccCCEEEEec
Q 022879          189 GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       189 g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      -. ......++.++++-.++.+.
T Consensus        66 kp-~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          66 KP-QLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             CG-GGHHHHHTTSCCCSCEEECC
T ss_pred             ch-HhHHHHhhhcccceeEeccc
Confidence            74 56677777787777766553

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.71  E-value=0.17  Score=35.05  Aligned_cols=32  Identities=22%  Similarity=0.610  Sum_probs=27.9

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      .|+++||.|+|.+|.--+..+...|+ .|.+++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVva   43 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVS   43 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEe
Confidence            68999999999999999999999999 566663

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.63  E-value=0.3  Score=36.57  Aligned_cols=69  Identities=28%  Similarity=0.318  Sum_probs=50.5

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      -.|.+|+|.|-|.+|..+++++...|+ ++++++.+..+.+.+. ..+...+ +   . .++          -..+.|++
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~~-~---~-~~~----------~~~~cDIl  100 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADAV-A---P-NAI----------YGVTCDIF  100 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEEC-C---G-GGT----------TTCCCSEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCccc-C---C-ccc----------ccccccEe
Confidence            478999999999999999999999999 6888888887776554 4554322 1   1 111          13468888


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      +=|...
T Consensus       101 ~PcA~~  106 (230)
T d1leha1         101 APCALG  106 (230)
T ss_dssp             EECSCS
T ss_pred             cccccc
Confidence            877665

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.1  Score=38.14  Aligned_cols=39  Identities=28%  Similarity=0.409  Sum_probs=34.0

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      ++|.|.|+|.+|...++++...|. .|+..+.+++..+.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 699999998765544

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.53  E-value=0.35  Score=35.04  Aligned_cols=92  Identities=18%  Similarity=0.185  Sum_probs=59.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE--EEecCCCcccHHHHHHHHHHHhCCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN--IVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      ++.+||=.|+| .|..+..+++. |+ .+++++.+++..+.+++    .+...  +...+-....           ....
T Consensus        30 ~~grvLDiGcG-~G~~~~~la~~-g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~   95 (198)
T d2i6ga1          30 APGRTLDLGCG-NGRNSLYLAAN-GY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----------FDGE   95 (198)
T ss_dssp             CSCEEEEETCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----------CCCC
T ss_pred             CCCcEEEECCC-CCHHHHHHHHH-hh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----------cccc
Confidence            34589999987 48888888764 88 69999999998886643    34332  2211111111           2356


Q ss_pred             ccEEEEcc-----CC---HHHHHHHHHHhccCCEEEEecc
Q 022879          181 IDVSFDCA-----GL---NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       181 ~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ||+|+...     ..   ...+..+.+.|+++|.++....
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          96 YDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99998633     11   1356678888999999887643

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.45  E-value=0.064  Score=38.76  Aligned_cols=37  Identities=30%  Similarity=0.530  Sum_probs=32.2

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ...+++|+|.|+|+.|+.|+..+...|. .|...+..+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4567899999999999999999999999 688887654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.35  E-value=0.058  Score=41.14  Aligned_cols=35  Identities=17%  Similarity=0.323  Sum_probs=30.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ..++|+|.|+|..|++++..+...|. .|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            46799999999999999999999999 688887643

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.34  E-value=0.21  Score=36.24  Aligned_cols=99  Identities=16%  Similarity=0.225  Sum_probs=61.3

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cC--CCEEEecCCCcccHHHHHHHH
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IG--ADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg--~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      ++.....++++||=.|+|. |..++.+++ .+. .+.+++-++...+.+++    .+  ...+-...   .++.+.+   
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~---~d~~~~~---  115 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVH---SDLYENV---  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEE---CSTTTTC---
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEE---cchhhhh---
Confidence            3456778899999998755 556666665 344 79999999988887754    22  21111111   1111111   


Q ss_pred             HHHhCCCccEEEEccC---CH----HHHHHHHHHhccCCEEEEe
Q 022879          174 QKAMGTGIDVSFDCAG---LN----KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       174 ~~~~~~~~d~vid~~g---~~----~~~~~~~~~l~~~G~~v~~  210 (290)
                         .+..||+|+-...   ..    ..+..+.+.|+++|.++..
T Consensus       116 ---~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               2457999986422   12    2466788899999998654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.32  E-value=0.89  Score=32.28  Aligned_cols=131  Identities=12%  Similarity=0.054  Sum_probs=75.5

Q ss_pred             eEEEECCCHHHHH-HHHHHHHCCCC-eEE-EEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          110 NVLIMGAGPIGLV-TMLAARAFGAP-RIV-IVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       110 ~vlI~Gag~vG~~-ai~la~~~g~~-~vv-~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++.|.|+|.+|.- .+...+..+-. .++ +.++++++.+ +.+.++...++.      ++.+.+      ....+|+|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~------~~~ell------~~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD------SYEELL------ESGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES------CHHHHH------HSSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee------eeeccc------cccccceee
Confidence            6889999999964 46666655432 344 4466666655 456677655432      333332      245699999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch---hhhc-cCcEEEEeeec-----CCcHHHHHHHHHcCCC
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PAAV-REVDVVGVFRY-----KNTWPLCLELLRSGKI  253 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~~-~~~~i~~~~~~-----~~~l~~~~~~~~~g~~  253 (290)
                      -|+....+...+..++.. |.-+.+.-+.....-...   .+.. ++..+.-.+..     ...+..+.+++++|++
T Consensus        73 I~tp~~~h~~~~~~al~~-gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRK-GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccccc-chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            999876676677666664 566666432211111111   1221 23333222221     3567888899999987

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.092  Score=34.60  Aligned_cols=36  Identities=22%  Similarity=0.477  Sum_probs=30.7

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      +.+|.|.|+|-+|.+.++-|+.+|+ .+++.+.++..
T Consensus        11 ~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2          11 ATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             CCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            3579999999999999999999999 57888776553

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.24  E-value=0.19  Score=33.59  Aligned_cols=39  Identities=26%  Similarity=0.420  Sum_probs=32.0

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ..-..+++++|.|+|.+|.-+++.+..+|. .|..++..+
T Consensus        25 ~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          25 TVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            344567899999999999999999999999 577776654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=93.22  E-value=0.16  Score=39.37  Aligned_cols=34  Identities=29%  Similarity=0.433  Sum_probs=27.8

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +..+|||+|+ |.+|...+..+...|.+ |+++.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~   36 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRP   36 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECC
Confidence            4568999998 99999999988889985 6666554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.19  E-value=0.17  Score=38.42  Aligned_cols=34  Identities=26%  Similarity=0.327  Sum_probs=30.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      -.|.+|+|.|-|.+|..+++++...|+ ++++++.
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            478999999999999999999999999 5777653

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.16  E-value=0.44  Score=36.73  Aligned_cols=95  Identities=17%  Similarity=0.214  Sum_probs=60.5

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-C------------C---EEEecCCCcccHHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-A------------D---NIVKVSTNLQDIAE  168 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~------------~---~~~~~~~~~~~~~~  168 (290)
                      ....++|||.|+|. |..+-++++. +...+.+++-+++=.+.++++- .            +   .++.     .|-..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-----~Da~~  142 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-----GDGFE  142 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-----SCHHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-----ChHHH
Confidence            46678999997654 3444555654 4457999999999888887632 1            1   1221     23333


Q ss_pred             HHHHHHHHhCCCccEEEE-ccCC---------HHHHHHHHHHhccCCEEEEec
Q 022879          169 EVEKIQKAMGTGIDVSFD-CAGL---------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       169 ~~~~~~~~~~~~~d~vid-~~g~---------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .++    . .+++|+||- ....         .+.+..+.+.|+++|.++.-.
T Consensus       143 ~l~----~-~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         143 FIK----N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HHH----H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHh----c-cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            332    2 467999964 3321         245777889999999988654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.15  E-value=0.1  Score=40.17  Aligned_cols=97  Identities=16%  Similarity=0.198  Sum_probs=59.7

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE-EEecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      .+++|++||-.++|. |..++.+|+. |...|++++.+++..+.+++    .+... +..+.....++         ...
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~---------~~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF---------PGE  172 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC---------CCC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh---------ccC
Confidence            368999999986643 4455666665 44479999999998887754    23221 22222211111         123


Q ss_pred             CCccEEEE-cc-CCHHHHHHHHHHhccCCEEEEec
Q 022879          179 TGIDVSFD-CA-GLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       179 ~~~d~vid-~~-g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ..+|.|+- .. .+...+..+++.++++|.+..+.
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            46886654 32 23356778899999988775543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.05  E-value=0.35  Score=38.11  Aligned_cols=95  Identities=15%  Similarity=0.199  Sum_probs=54.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHH---HHHcCC-CEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV---AKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~---~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      .+.+|++||-.|+|. |..++.+++ .|++.|++++.++.....   ++.-+. +.+........++        .....
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~--------~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV--------ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC--------CCSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc--------ccccc
Confidence            355889999998865 666665555 588789999988643222   222232 2121111111111        11235


Q ss_pred             CccEEEEccCC---------HHHHHHHHHHhccCCEEE
Q 022879          180 GIDVSFDCAGL---------NKTMSTALGATCAGGKVC  208 (290)
Q Consensus       180 ~~d~vid~~g~---------~~~~~~~~~~l~~~G~~v  208 (290)
                      .+|+|+.....         +..+...-+.|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            79999753221         234455667899999876

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.01  E-value=0.16  Score=40.44  Aligned_cols=74  Identities=18%  Similarity=0.066  Sum_probs=42.9

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC-CCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|||+|+ |-+|...++.+...|...|++++....+...+.....-..+.-+ ....++.+.   ..    .++|+||.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~---~~----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEY---HV----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHH---HH----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHH---HH----hCCCccccc
Confidence            6999988 99999999887777743688886654443322221111222211 112222221   21    258999998


Q ss_pred             cCC
Q 022879          188 AGL  190 (290)
Q Consensus       188 ~g~  190 (290)
                      ++.
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            874

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.99  E-value=0.28  Score=35.18  Aligned_cols=90  Identities=17%  Similarity=0.037  Sum_probs=57.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEE-eCChhHHH-HHHHcCCCEE-EecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIV-DVDDYRLS-VAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v-~~~~~~~~-~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++.|.|.|.+|...++..+.. ++ .++++ +.++++.+ +.++++.... -.+    .++.    ++.  ....+|+|+
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~----~ll--~~~~iD~v~   71 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH----GSYE----SLL--EDPEIDALY   71 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHH----HHH--HCTTCCEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec----CcHH----Hhh--hccccceee
Confidence            678899999998888877766 56 45544 66666644 4455663211 011    2333    332  235799999


Q ss_pred             EccCCHHHHHHHHHHhccCCEEEEec
Q 022879          186 DCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       186 d~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      -++....+...+..++.. |.-+.+.
T Consensus        72 I~tp~~~h~~~~~~~l~~-g~~v~~E   96 (184)
T d1ydwa1          72 VPLPTSLHVEWAIKAAEK-GKHILLE   96 (184)
T ss_dssp             ECCCGGGHHHHHHHHHTT-TCEEEEC
T ss_pred             ecccchhhcchhhhhhhc-cceeecc
Confidence            999987777778777775 5656664

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.98  E-value=0.76  Score=35.89  Aligned_cols=58  Identities=12%  Similarity=0.162  Sum_probs=43.8

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEE
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~  157 (290)
                      .+...+.++++|+...+|+-|++++..|+.+|.+.++++  ..++.|...++.+|+..+.
T Consensus        53 ~~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          53 EKDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HHTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HHcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            334556777776666779999999999999999865555  4445778888889987654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.94  E-value=0.1  Score=34.58  Aligned_cols=36  Identities=22%  Similarity=0.440  Sum_probs=30.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      +.+++++|.|+|.+|.-+++.+..+|. .|..+.+.+
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hcCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            445899999999999999999999999 577776554

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.83  E-value=0.74  Score=35.56  Aligned_cols=113  Identities=14%  Similarity=0.154  Sum_probs=68.9

Q ss_pred             HHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEecCCC---------------
Q 022879          100 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTN---------------  162 (290)
Q Consensus       100 l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~---------------  162 (290)
                      .+...+.++.+|+...+|+.|++++..|+.+|.+.++.+  ..++.+.+.++.+|+.-++.....               
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            344556666666666789999999999999999755544  346778889999998754421110               


Q ss_pred             -----------cccHHH----HHHHHHHHhCCCccEEEEccCCHHHHHHHH---HHhccCCEEEEecc
Q 022879          163 -----------LQDIAE----EVEKIQKAMGTGIDVSFDCAGLNKTMSTAL---GATCAGGKVCLVGM  212 (290)
Q Consensus       163 -----------~~~~~~----~~~~~~~~~~~~~d~vid~~g~~~~~~~~~---~~l~~~G~~v~~g~  212 (290)
                                 ...+..    ...++.+..+..+|.++-++|+...+.-..   +...+..+++.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                       000111    001222223445899998888755544433   34456677766654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.69  E-value=1.1  Score=31.78  Aligned_cols=95  Identities=21%  Similarity=0.133  Sum_probs=54.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEE-eCC-hhHHHHHHHcCCCEEEecCCCcccHHH----------HHHHHHHH
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIV-DVD-DYRLSVAKEIGADNIVKVSTNLQDIAE----------EVEKIQKA  176 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v-~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~----------~~~~~~~~  176 (290)
                      +|.|.|-|-+|...++.+... .. .++++ +.. ......+...+......    .+....          .+...   
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~g~~~~~---   74 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVP----QQSIKKFEESGIPVAGTVEDL---   74 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECC----GGGHHHHHTTTCCCCCCHHHH---
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceecc----CccceeccccceecCCchhhh---
Confidence            688999999999999988865 44 46665 332 23333333333222111    011000          00000   


Q ss_pred             hCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       177 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                       ..++|+|+||+|.......+-.++..+-+++..+..
T Consensus        75 -~~~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          75 -IKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             -HHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             -hhcCCEEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence             124899999999866666677777766566665543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.68  E-value=0.11  Score=34.51  Aligned_cols=38  Identities=21%  Similarity=0.313  Sum_probs=31.6

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .++..++|+|.|+|.+|.-+++.++.+|. .|..+.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            45567899999999999999999999999 577776543

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.68  E-value=0.036  Score=43.53  Aligned_cols=101  Identities=16%  Similarity=0.158  Sum_probs=61.1

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEE-EecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNI-VKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~-~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      +.+++.+||=.|+|. |..++.|++. |+ .|++++.+++..+.+++.    +.... ........++...-..  ....
T Consensus        53 ~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  127 (292)
T d1xvaa_          53 RQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD--VPAG  127 (292)
T ss_dssp             HHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH--SCCT
T ss_pred             hhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccc--cCCC
Confidence            345677998888866 7788888875 88 699999999988777542    11100 0000001111111011  1124


Q ss_pred             CCccEEEEccCC--------------HHHHHHHHHHhccCCEEEE
Q 022879          179 TGIDVSFDCAGL--------------NKTMSTALGATCAGGKVCL  209 (290)
Q Consensus       179 ~~~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~  209 (290)
                      ..+|.|+.....              ...+..+.+.|+|+|.++.
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            579999864321              1267889999999999886

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.62  E-value=0.064  Score=41.68  Aligned_cols=33  Identities=21%  Similarity=0.491  Sum_probs=29.3

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +++|+|.|+|..|++++..++..|. .|.+++.+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            5789999999999999999999999 68888764

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=92.60  E-value=0.35  Score=39.25  Aligned_cols=56  Identities=18%  Similarity=0.261  Sum_probs=42.2

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEe
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~  158 (290)
                      .+++++.+|+-..+|+.|.+.+..|+.+|.+.++++  ..+++|.+.++.+|++-+..
T Consensus       139 ~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         139 RRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             hccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            356777765545679999999999999999755555  34568888899999876543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.60  E-value=1.3  Score=32.22  Aligned_cols=95  Identities=11%  Similarity=0.085  Sum_probs=61.7

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      ..||=.|+|. |..++.+|+..--..+++++.++.....+    ++.+.+.+.-.......+.    +.  .....+|.|
T Consensus        31 PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~----~~--~~~~~~d~v  103 (204)
T d2fcaa1          31 PIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT----DV--FEPGEVKRV  103 (204)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH----HH--CCTTSCCEE
T ss_pred             ceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhh----cc--cCchhhhcc
Confidence            3455568877 88999999987555899999998876654    4456554433222222222    11  134568877


Q ss_pred             EEccCC--------------HHHHHHHHHHhccCCEEEEe
Q 022879          185 FDCAGL--------------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       185 id~~g~--------------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +-....              +..+..+.+.|+|+|.+...
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            654332              25788899999999998765

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.58  E-value=0.12  Score=39.57  Aligned_cols=31  Identities=26%  Similarity=0.434  Sum_probs=27.0

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +|||+|+ |-+|...+..++..|. .|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            5899998 9999999999999999 58887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.55  E-value=0.44  Score=37.77  Aligned_cols=30  Identities=33%  Similarity=0.421  Sum_probs=25.5

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      +.|||+|+ |-+|...+..+...|. .|++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d   32 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVAD   32 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEE
Confidence            47899988 9999999998888898 577774

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.47  E-value=0.5  Score=35.01  Aligned_cols=106  Identities=20%  Similarity=0.241  Sum_probs=68.4

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHH-
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA-  176 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~-  176 (290)
                      .+....++||-.|.+. |..++.+|+++.. .++++++.+++..+.++.    .|....+..  ...+..+.+.++... 
T Consensus        55 ~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~--~~Gda~e~l~~~~~~~  131 (219)
T d2avda1          55 ARLIQAKKALDLGTFT-GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDL--RLKPALETLDELLAAG  131 (219)
T ss_dssp             HHHTTCCEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEE--EESCHHHHHHHHHHTT
T ss_pred             HHccCCCeEEEEechh-hHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEE--EEeehhhcchhhhhhc
Confidence            4456678999998754 7788888887632 279999999988776654    353322221  123444445444332 


Q ss_pred             hCCCccEEEEccCCH---HHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ....||+||--....   ..+..+++.|+++|-++.=.
T Consensus       132 ~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         132 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence            245799997654432   34678889999999888643

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.26  E-value=0.063  Score=32.83  Aligned_cols=34  Identities=24%  Similarity=0.405  Sum_probs=29.0

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      ++|.|.|+|-.|.+.++-++.+|. .+.+.+.++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            478999999999999999999999 5777766543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.20  E-value=1.1  Score=30.32  Aligned_cols=29  Identities=24%  Similarity=0.249  Sum_probs=21.2

Q ss_pred             eEEEECC-CHHHHHHHHHHHH-CCCCeEEEE
Q 022879          110 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIV  138 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~-~g~~~vv~v  138 (290)
                      +|.|.|+ |-+|+..++.... -+++.+-.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            6889997 9999998887665 466433333

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.13  E-value=1.2  Score=30.61  Aligned_cols=39  Identities=26%  Similarity=0.485  Sum_probs=31.1

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYR  144 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~  144 (290)
                      ..+.+|.|.|+|.+|...+..+...+. ..++.++.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            356789999999999988887776664 368888888876

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.11  E-value=1.2  Score=30.70  Aligned_cols=95  Identities=19%  Similarity=0.191  Sum_probs=58.8

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHC--CCCeEEEEeCChhH---HHHHHHcCCCEEEecCCCcccHHHHHHHHHH-------
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYR---LSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-------  175 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~--g~~~vv~v~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------  175 (290)
                      ++|.|.|+ |++|..++.+.+..  .+ .+++.+....-   .+.+++|.+..+...+   ++....+.+...       
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d---~~~~~~l~~~l~~~~~~~~   77 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDD---EASAKLLKTMLQQQGSRTE   77 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESS---HHHHHHHHHHHHHTTCCCE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhccccccc---HHHHHHHHHHhhhhccccc
Confidence            36889998 99999999999987  34 45555444322   3344668887776533   222222222111       


Q ss_pred             -----------HhCCCccEEEEccCCHHHHHHHHHHhccCCEE
Q 022879          176 -----------AMGTGIDVSFDCAGLNKTMSTALGATCAGGKV  207 (290)
Q Consensus       176 -----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  207 (290)
                                 ....++|+++.+..+-..+...+..++.+=++
T Consensus        78 ~~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~i  120 (151)
T d1q0qa2          78 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTI  120 (151)
T ss_dssp             EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEE
T ss_pred             cccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeE
Confidence                       12236788888877767777777777755443

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.07  E-value=0.08  Score=39.91  Aligned_cols=36  Identities=31%  Similarity=0.499  Sum_probs=30.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      ++++||+|+ +++|.+.++.+...|+ .|+.++.++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            367899987 9999999999999999 68888877654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=1.2  Score=30.51  Aligned_cols=96  Identities=10%  Similarity=0.102  Sum_probs=57.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHH---cCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      +.++++|.|.|.+|...++.+...|.+ +++++.++++ .+.++.   .+.. ++.-+..+   .+.+++.   +-...|
T Consensus         2 ~knHiII~G~g~~g~~l~~~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d---~~~L~~a---~i~~a~   73 (153)
T d1id1a_           2 RKDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND---SSVLKKA---GIDRCR   73 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS---HHHHHHH---TTTTCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEeccchhHHHHHHHhhcCCcE-EEEccCcc---hHHHHHh---ccccCC
Confidence            456899999999999999999999995 7777777654 223332   3333 33222222   2233332   446789


Q ss_pred             EEEEccCCHHHHH---HHHHHhccCCEEEEe
Q 022879          183 VSFDCAGLNKTMS---TALGATCAGGKVCLV  210 (290)
Q Consensus       183 ~vid~~g~~~~~~---~~~~~l~~~G~~v~~  210 (290)
                      .++-+++.+..-.   ...+.+.+.-+++..
T Consensus        74 ~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          74 AILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            9999988743211   223334455555543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=0.34  Score=38.77  Aligned_cols=32  Identities=19%  Similarity=0.075  Sum_probs=26.9

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.+||+|+ |-+|...+..+...|. .|+++++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899987 9999999998888898 68888764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.00  E-value=0.38  Score=38.18  Aligned_cols=37  Identities=19%  Similarity=0.189  Sum_probs=30.0

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      +.++|||+|+ |.+|...+..+...|.+ |.++.++..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcch
Confidence            4679999988 99999999999999995 6666665443

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.98  E-value=0.16  Score=33.74  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=29.2

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.+++++|.|+|.+|+=+++.++.+|.+ |..+...
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~~-Vtiv~~~   54 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGAE-VTVLEAM   54 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCCc-eEEEEee
Confidence            3558999999999999999999999994 6666544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.92  E-value=0.15  Score=34.01  Aligned_cols=35  Identities=23%  Similarity=0.420  Sum_probs=29.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      ..++++|.|+|.+|.-+++.+..+|. .|..+...+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            45799999999999999999999999 577775543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.89  E-value=0.35  Score=38.28  Aligned_cols=94  Identities=21%  Similarity=0.302  Sum_probs=52.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEecCCCcccHHHHHHHHHHHhC
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ...++++||-.|+|. |..++.+++ .|++.|++++.++. .+.+    +..+.. .+........++        ....
T Consensus        35 ~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l--------~~~~  103 (328)
T d1g6q1_          35 DLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDV--------HLPF  103 (328)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTS--------CCSS
T ss_pred             ccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhc--------cCcc
Confidence            346789999998864 555554444 68878999998863 2222    333422 121111211111        0124


Q ss_pred             CCccEEEEccCC---------HHHHHHHHHHhccCCEEE
Q 022879          179 TGIDVSFDCAGL---------NKTMSTALGATCAGGKVC  208 (290)
Q Consensus       179 ~~~d~vid~~g~---------~~~~~~~~~~l~~~G~~v  208 (290)
                      ..+|+|+...-.         ...+...-+.|+|+|.++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            579998763211         123444457899999875

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.86  E-value=0.024  Score=43.23  Aligned_cols=90  Identities=19%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEecCCCcccHHHHHHHHHHHhCCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  180 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (290)
                      .++.+||=.|+|+ |..+..+++. |. .+++++.+++..+.+++    .+.. .++.  .   +.    .++  ...+.
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~~-g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~--~---d~----~~~--~~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCPK-FK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC--Q---DI----SNL--NINRK  101 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGGG-SS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC--C---CG----GGC--CCSCC
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHHh-CC-ccEeeccchhhhhhccccccccCccceeec--c---ch----hhh--ccccc
Confidence            4567899999875 7777777764 77 69999999998877654    2322 2221  1   11    111  12457


Q ss_pred             ccEEEEccCC------H----HHHHHHHHHhccCCEEEE
Q 022879          181 IDVSFDCAGL------N----KTMSTALGATCAGGKVCL  209 (290)
Q Consensus       181 ~d~vid~~g~------~----~~~~~~~~~l~~~G~~v~  209 (290)
                      ||+|+...+.      .    ..+..+.+.|+|+|.++.
T Consensus       102 fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         102 FDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9999864321      1    256778888999999874

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.85  E-value=0.14  Score=33.78  Aligned_cols=36  Identities=25%  Similarity=0.321  Sum_probs=30.2

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      -.++++|.|+|.+|.-+++.++.+|. .|..+.+.+.
T Consensus        20 ~p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          20 LPERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            35799999999999999999999999 5777766543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.84  E-value=0.2  Score=39.59  Aligned_cols=32  Identities=19%  Similarity=0.008  Sum_probs=27.8

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +++||+|+ |-+|...+..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899998 9999999999999999 68888763

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.83  E-value=0.19  Score=33.56  Aligned_cols=38  Identities=32%  Similarity=0.601  Sum_probs=32.1

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      ++++++++|.|+|.+|.-++..++.+|. .|..+..++.
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            5677999999999999999999999999 5777766653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.64  E-value=0.25  Score=37.68  Aligned_cols=41  Identities=17%  Similarity=0.213  Sum_probs=32.2

Q ss_pred             HHHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Q 022879           98 HACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus        98 ~~l~~~~-~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      .+++... --.|.+|+|.|-|.+|..+++++...|+ ++++++
T Consensus        25 ~~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          25 AVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             HHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             HHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            3444422 3478899999999999999999999999 577664

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.62  E-value=0.29  Score=37.61  Aligned_cols=34  Identities=26%  Similarity=0.486  Sum_probs=28.1

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .++|||+|+ |-+|...+..+...|.+ |++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~-V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEECCC
Confidence            468999998 99999999999889985 77776543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.59  E-value=0.71  Score=36.43  Aligned_cols=36  Identities=14%  Similarity=-0.014  Sum_probs=27.0

Q ss_pred             CCeEEEECC---CHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          108 ETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       108 ~~~vlI~Ga---g~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      ++..||+|+   .++|.+.++.+...|++ |+.+..++..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~~   40 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVY   40 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGGH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchhh
Confidence            456788984   38999999999999995 6666555443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.58  E-value=0.21  Score=35.84  Aligned_cols=38  Identities=21%  Similarity=0.354  Sum_probs=31.6

Q ss_pred             eEEEE-CCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          110 NVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       110 ~vlI~-Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      +|.|. |+|++|.+.++.+...|. .|+..++++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57788 569999999999999999 577778998876644

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.45  E-value=0.14  Score=38.35  Aligned_cols=38  Identities=26%  Similarity=0.367  Sum_probs=32.1

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      .+.+++|+|.|+|..|+.++..++..|. .+..++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            3577899999999999999999999999 6888866553

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.37  E-value=0.2  Score=35.87  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=31.7

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      -++++|||.|+|+++.+++.-+...|  .+..+.++.++.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            47789999999999998876665444  688888888776544

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.36  E-value=0.13  Score=39.40  Aligned_cols=33  Identities=30%  Similarity=0.507  Sum_probs=28.4

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      +|+|.|+|..|++++.+++..|...|.+++.++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999976677776654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.36  E-value=0.68  Score=29.22  Aligned_cols=72  Identities=15%  Similarity=0.140  Sum_probs=47.5

Q ss_pred             CCCCCeEEEECCCHHHHHH-HHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCcc
Q 022879          105 IGPETNVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  182 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~a-i~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  182 (290)
                      .+..+++.+.|-|++|+.+ +++++..|+ .|.+.+... ...+.+.+.|......  ....            +-.+.|
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g--~~~~------------~i~~~d   69 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIG--HAEE------------HIEGAS   69 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEES--CCGG------------GGTTCS
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEEC--Cccc------------cCCCCC
Confidence            4567889999988888777 789999999 688887653 3445566678753322  1111            123578


Q ss_pred             EEEEccCCH
Q 022879          183 VSFDCAGLN  191 (290)
Q Consensus       183 ~vid~~g~~  191 (290)
                      +|+=+.+.+
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            887766543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.32  E-value=0.11  Score=38.08  Aligned_cols=88  Identities=18%  Similarity=0.158  Sum_probs=56.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+|.|.|.|.+|...+++++.+|+ .|++.+....+..       ...+.    ..++.+.++        ..|++.-
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-------~~~~~----~~~l~~l~~--------~~D~v~~  103 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD-------HPDFD----YVSLEDLFK--------QSDVIDL  103 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC-------CTTCE----ECCHHHHHH--------HCSEEEE
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh-------hcchh----HHHHHHHHH--------hccccee
Confidence            46899999999999999999999999 6888876543210       00011    112222222        2577766


Q ss_pred             ccCCHHH-----HHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNKT-----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      ++...+.     -...++.|+++..+|..+...
T Consensus       104 ~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG~  136 (199)
T d1dxya1         104 HVPGIEQNTHIINEAAFNLMKPGAIVINTARPN  136 (199)
T ss_dssp             CCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTT
T ss_pred             eecccccccccccHHHhhccCCceEEEecccHh
Confidence            5543221     235778888888888887543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.24  E-value=0.31  Score=34.29  Aligned_cols=129  Identities=14%  Similarity=0.123  Sum_probs=72.7

Q ss_pred             eEEEECCCHHHHH-HHHHHHHC-CCCeEEEEeCChhHHHHH-HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGAGPIGLV-TMLAARAF-GAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Gag~vG~~-ai~la~~~-g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +|.|.|+|.+|.. .+...+.. +. .+++++.++++.+.+ +.++....+.      ++.+.+       ...+|+|+-
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~------~~~~ll-------~~~iD~V~I   68 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT------DYRDVL-------QYGVDAVMI   68 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS------STTGGG-------GGCCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc------cHHHhc-------ccccceecc
Confidence            6889999999964 45555554 55 466777887766644 5577544321      221111       135899999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccch---hhh-ccCcE-EEEeeecCCcHHHHHHHHHcCCC
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PAA-VREVD-VVGVFRYKNTWPLCLELLRSGKI  253 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~-~~~~~-i~~~~~~~~~l~~~~~~~~~g~~  253 (290)
                      |+....+...+..++..+ .-+.+.-+.....-...   .+. .++.. ..+.......+.++.+.+..|++
T Consensus        69 ~tp~~~H~~~~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccccccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCC
Confidence            999877777787777754 55555422211111111   111 22222 23322223446677777777877

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.19  E-value=0.31  Score=38.18  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=26.4

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      ++|||+|+ |-+|...+..+...|. .|++++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            68999998 9999999998888899 5777753

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.17  E-value=0.33  Score=38.82  Aligned_cols=75  Identities=19%  Similarity=0.209  Sum_probs=44.5

Q ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          107 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       107 ~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      ++-+|||+|+ |-+|...+..+...|. .|++++....... ............+  ..+.....+.+     .++|.|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D--~~~~~~~~~~~-----~~~d~Vi   84 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVD--LRVMENCLKVT-----EGVDHVF   84 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECC--TTSHHHHHHHH-----TTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEee--chhHHHHHHHh-----hcCCeEe
Confidence            4668999987 9999999999999998 5777755432211 1112222222222  12222222221     4699999


Q ss_pred             EccCC
Q 022879          186 DCAGL  190 (290)
Q Consensus       186 d~~g~  190 (290)
                      ++++.
T Consensus        85 h~a~~   89 (363)
T d2c5aa1          85 NLAAD   89 (363)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            97743

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.13  E-value=0.18  Score=36.46  Aligned_cols=39  Identities=18%  Similarity=0.354  Sum_probs=33.2

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      ++|.|.|+|.+|...+.++...|+ .|+..+.+++..+..
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            579999999999999888888899 588999998876543

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.41  Score=35.38  Aligned_cols=96  Identities=20%  Similarity=0.120  Sum_probs=62.9

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC----CCE--EEecCCCcccHHHHHHHHHHHh
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----ADN--IVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg----~~~--~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ...++.+||=.|+|. |..+..+++..+. .|++++-+++..+.+++.-    ...  .+.  ..-.++       . ..
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~--~d~~~~-------~-~~  124 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFC--CGLQDF-------T-PE  124 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEE--CCGGGC-------C-CC
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccc--cccccc-------c-cc
Confidence            356778899998866 7777777766555 7999999999988887632    111  121  111111       0 12


Q ss_pred             CCCccEEEEcc-----CCH---HHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCA-----GLN---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+..-     ..+   ..+..+.+.|+++|.++...
T Consensus       125 ~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         125 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            45799998732     222   36778889999999998764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.03  E-value=0.2  Score=33.48  Aligned_cols=35  Identities=14%  Similarity=0.123  Sum_probs=28.8

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.+++++|.|+|.+|.-.++.++.+|.+ |..+..+
T Consensus        18 ~~P~~vvIIGgG~iG~E~A~~l~~lG~~-Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVVGASYVALECAGFLAGIGLD-VTVMVRS   52 (122)
T ss_dssp             SCCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             cCCCeEEEECCCccHHHHHHHHhhcCCe-EEEEEec
Confidence            3557999999999999999999999996 5555443

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.96  E-value=0.18  Score=39.22  Aligned_cols=33  Identities=30%  Similarity=0.470  Sum_probs=29.4

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      .|.+|+|.|-|++|..+++++...|+ ++++++.
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEc
Confidence            67899999999999999999999999 6777753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.95  E-value=0.24  Score=33.53  Aligned_cols=39  Identities=18%  Similarity=0.357  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      .++++++++|.|+|.+|.-++..++.+|. .|..++..+.
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            45678999999999999999999999999 5777766543

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.89  E-value=0.081  Score=41.18  Aligned_cols=98  Identities=15%  Similarity=0.209  Sum_probs=64.7

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      .++.++.+||=.|+|. |..+..+++..+. ..+++++.+++..+.+++    .+....+.. ....+       +  ..
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~-~d~~~-------~--~~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLE-GDATE-------I--EL   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEE-SCTTT-------C--CC
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccc-ccccc-------c--cc
Confidence            3577888999889875 7888888887642 269999999988887754    232211111 11111       0  11


Q ss_pred             CCCccEEEEccC-----C-HHHHHHHHHHhccCCEEEEec
Q 022879          178 GTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       178 ~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      ...||+|+..-.     . ...+..+.+.|+|+|.++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            346999986432     2 246788999999999998764

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=90.87  E-value=0.45  Score=36.12  Aligned_cols=102  Identities=16%  Similarity=0.014  Sum_probs=65.6

Q ss_pred             HhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEecCCCcccHHHHHHHHHHHhCC
Q 022879          101 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       101 ~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      +.....++.+||=.|+|. |..+..++...+. .|.+++.+++..+.+++. .....+.+..  .+    +.++. ...+
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~d----~~~~~-~~~~  157 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL--AS----METAT-LPPN  157 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE--SC----GGGCC-CCSS
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE--cc----ccccc-cCCC
Confidence            334556778898898876 7788888776554 799999999999888763 3222222111  11    11110 1245


Q ss_pred             CccEEEEccCC-----H---HHHHHHHHHhccCCEEEEec
Q 022879          180 GIDVSFDCAGL-----N---KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       180 ~~d~vid~~g~-----~---~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .||+|+..---     +   ..+..+.+.|+++|.++..-
T Consensus       158 ~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            79999764322     1   34677888999999998754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.77  E-value=0.16  Score=39.89  Aligned_cols=38  Identities=21%  Similarity=0.439  Sum_probs=31.6

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .....++|+|.|+|..|++++..++..|. .|.+++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34566799999999999999998888899 688887653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.73  E-value=0.12  Score=39.06  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=27.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      +|+|.|+|..|+.++..++..|.+.|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999889975588887653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.47  E-value=0.26  Score=32.98  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .++++|.|+|.+|.-+++.++.+|. .|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4799999999999999999999999 577776643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.47  E-value=0.19  Score=36.23  Aligned_cols=85  Identities=18%  Similarity=0.140  Sum_probs=57.7

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .|++|.|.|.|.+|...+++++.+|+ +|++.++++..       +...      ...++.    ++.    ...|+|+-
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~------~~~~l~----ell----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWR------FTNSLE----EAL----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSC------CBSCSH----HHH----TTCSEEEE
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------ccee------eeechh----hhh----hccchhhc
Confidence            57899999999999999999999999 68888765432       1111      111222    221    35788887


Q ss_pred             ccCCHH-----HHHHHHHHhccCCEEEEeccC
Q 022879          187 CAGLNK-----TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ++...+     .-...++.++++..+|.++..
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~RG  130 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVGRA  130 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             ccccccccccccccceeeeccccceEEecccc
Confidence            665421     113577788888988888743

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.47  E-value=0.12  Score=41.71  Aligned_cols=31  Identities=26%  Similarity=0.317  Sum_probs=26.2

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      +|||+|+ |-+|...+..+...|.+++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6899988 999999999888889877777754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.45  E-value=0.22  Score=32.75  Aligned_cols=35  Identities=29%  Similarity=0.561  Sum_probs=29.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .+++++|.|+|.+|.-+++.++.+|. .|..+...+
T Consensus        20 ~p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            34899999999999999999999999 577775553

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.43  E-value=3.1  Score=32.37  Aligned_cols=112  Identities=22%  Similarity=0.203  Sum_probs=68.1

Q ss_pred             HHhcCCCCCCeEEEE-CCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEecCC---------------
Q 022879          100 CRRANIGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVST---------------  161 (290)
Q Consensus       100 l~~~~~~~~~~vlI~-Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~---------------  161 (290)
                      .+...++++.+.+|. .+|+.|.+.+..++.+|.+.++++  ..++.|.+.++.+|++-+..-..               
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            344556666665665 669999999999999999754444  45568888999999875432100               


Q ss_pred             ------------CcccHHH----HHHHHHHHhCCCccEEEEccCCHHHHHH---HHHHhccCCEEEEec
Q 022879          162 ------------NLQDIAE----EVEKIQKAMGTGIDVSFDCAGLNKTMST---ALGATCAGGKVCLVG  211 (290)
Q Consensus       162 ------------~~~~~~~----~~~~~~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  211 (290)
                                  +..++..    ...++.+.....+|.++-++|+...+.-   .++...+.-+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                        0000111    1112222234468999999988655443   334455666776654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=90.40  E-value=0.51  Score=34.03  Aligned_cols=83  Identities=8%  Similarity=0.187  Sum_probs=52.7

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC------EEEecC-CCcccHHHHHHHHHHHhCCCc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD------NIVKVS-TNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      .+|.|.|+|..|.+.+.++...|- .|....++++..+.+..-+..      ..++-+ ....++.+.+        .+.
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~--------~~a   78 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY--------NGA   78 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH--------TTC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc--------CCC
Confidence            379999999999998888887776 678888888887776543211      000000 0112333222        357


Q ss_pred             cEEEEccCCHHHHHHHHHHh
Q 022879          182 DVSFDCAGLNKTMSTALGAT  201 (290)
Q Consensus       182 d~vid~~g~~~~~~~~~~~l  201 (290)
                      |++|-++.. ..+...++.+
T Consensus        79 d~iiiavPs-~~~~~~~~~~   97 (189)
T d1n1ea2          79 EIILFVIPT-QFLRGFFEKS   97 (189)
T ss_dssp             SCEEECSCH-HHHHHHHHHH
T ss_pred             CEEEEcCcH-HHHHHHHHHH
Confidence            999999986 4556655544

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.32  E-value=0.23  Score=33.28  Aligned_cols=35  Identities=29%  Similarity=0.455  Sum_probs=29.6

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.+++++|.|+|.+|.=+++..+.+|. .+..+...
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEee
Confidence            456899999999999999999999999 57776554

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.30  E-value=3  Score=31.99  Aligned_cols=60  Identities=20%  Similarity=0.241  Sum_probs=44.0

Q ss_pred             HHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEE
Q 022879           97 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNI  156 (290)
Q Consensus        97 ~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~  156 (290)
                      .++++....+++.++...++|+.|.+++..++.+|.+..+++  ..++.+...++.+|+.-+
T Consensus        50 ~~a~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~  111 (302)
T d1fcja_          50 WDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV  111 (302)
T ss_dssp             HHHHHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HHHHHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence            334455567777776666789999999999999999855555  445677778888887644

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.23  E-value=0.22  Score=35.12  Aligned_cols=36  Identities=11%  Similarity=0.298  Sum_probs=29.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCCh
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDD  142 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~-~vv~v~~~~  142 (290)
                      .|++|+|.|+|.+|..+++.++..+.+ .|+.++..+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999988888754 566676554

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.10  E-value=1.4  Score=31.03  Aligned_cols=96  Identities=18%  Similarity=0.231  Sum_probs=57.3

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEE-eCC-hhHHHHHHHcCCC--------------------EEEecCCCcccHH
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIV-DVD-DYRLSVAKEIGAD--------------------NIVKVSTNLQDIA  167 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v-~~~-~~~~~~~~~lg~~--------------------~~~~~~~~~~~~~  167 (290)
                      +|.|.|-|-+|..+.+.+...+.+ ++++ +.. .+...++-++...                    .+..+...++.  
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~-iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~--   78 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVE-VALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK--   78 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG--
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCE-EEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH--
Confidence            688999999999999988888885 5555 222 2333344322210                    01111111110  


Q ss_pred             HHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          168 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       168 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                       .+ .|   ...++|+|+||+|.-.....+..++..+-+-|.+..+
T Consensus        79 -~i-~W---~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          79 -EI-PW---AEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             -GC-CT---GGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             -HC-cc---cccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence             00 02   2347999999999865566777888877766666543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.09  E-value=2  Score=29.67  Aligned_cols=128  Identities=10%  Similarity=0.021  Sum_probs=70.3

Q ss_pred             eEEEECCCHHHHH-HHHHHHHC-CCCeEEEEeCChhHH-HHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          110 NVLIMGAGPIGLV-TMLAARAF-GAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       110 ~vlI~Gag~vG~~-ai~la~~~-g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      +|.|.|.|.+|.- .+...+.. +++.+.+.+.++++. ++.+.++...   ++    +    .+++.    ..+|+|+-
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~----~----~~~l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---AD----S----LSSLA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CS----S----HHHHH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cc----c----chhhh----hhcccccc
Confidence            6788999999964 56655544 664444445655554 4556677542   11    2    22221    25899999


Q ss_pred             ccCCHHHHHHHHHHhccCCEEEEeccCCCCccccchh---h-hccCcEEEEeeec---CCcHHHHHHHHHcCCC
Q 022879          187 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREVDVVGVFRY---KNTWPLCLELLRSGKI  253 (290)
Q Consensus       187 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~~i~~~~~~---~~~l~~~~~~~~~g~~  253 (290)
                      ++....+...+..++.. |.-+.+.-+.....-....   + -.++..+.-.+..   ....+.+.+++++|.+
T Consensus        68 ~tp~~~h~~~~~~al~~-gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~i  140 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNA-GVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTV  140 (164)
T ss_dssp             CSCTTHHHHHHHHHHHT-TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCC
T ss_pred             cccchhccccccccccc-cceeeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCC
Confidence            99887777777777765 4556654322211111111   1 1223322222222   2234567788888888

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.05  E-value=0.17  Score=33.83  Aligned_cols=37  Identities=22%  Similarity=0.354  Sum_probs=31.1

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      +.+++++|.|+|.+|+=+++.++.+|. .|..+.+++.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            456899999999999999999999999 5777766543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.88  E-value=0.14  Score=39.65  Aligned_cols=33  Identities=33%  Similarity=0.432  Sum_probs=28.8

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      .|+|.|+|..|++++..++..|. .|.+++..++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            69999999999999999999999 5888877653

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.80  E-value=2.1  Score=34.48  Aligned_cols=49  Identities=20%  Similarity=0.335  Sum_probs=35.5

Q ss_pred             CeEEEE-CCCHHHHHHHHHHHHCCCCeEEEEeC-----ChhHHHHHHHcCCCEEE
Q 022879          109 TNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDV-----DDYRLSVAKEIGADNIV  157 (290)
Q Consensus       109 ~~vlI~-Gag~vG~~ai~la~~~g~~~vv~v~~-----~~~~~~~~~~lg~~~~~  157 (290)
                      .++++. ++|+-|.+++..|+.+|.+-++.+..     ...+...++.+|++-+.
T Consensus       103 ~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~  157 (390)
T d1qopb_         103 SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIP  157 (390)
T ss_dssp             CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEE
T ss_pred             ceeeeehhHHHHHHHHHHHHHhccCceEEeecccccccchHHHHHHHhcCceEEE
Confidence            467664 77999999999999999975444422     23456677889987554

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.73  E-value=0.32  Score=33.88  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=30.0

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      .-+++|+|.|+|.+|.=++..+...|++.|..+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            346789999999999999999999999877777543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.68  E-value=0.59  Score=36.91  Aligned_cols=30  Identities=37%  Similarity=0.490  Sum_probs=25.9

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEe
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  139 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~  139 (290)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999988 9999999999988998 477764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=89.66  E-value=2.1  Score=29.16  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=60.2

Q ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          109 TNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       109 ~~vlI~G-ag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      ++|.|.| .|.+|...+..++..|+ .|.+.+.++........-+++.++.. .........+.++.. .-.+=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~-~~~~~~~~v~~~~~~-~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVS-VPINLTLETIERLKP-YLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEEC-SCGGGHHHHHHHHGG-GCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccc-cchhhheeeeecccc-cccCCceEEEe
Confidence            5899999 59999999999999999 58888887766555555566666543 223344444444432 22233588888


Q ss_pred             cCCHHHHHHHHHHhccCCEEEEe
Q 022879          188 AGLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       188 ~g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      ..........+.... ..+++..
T Consensus        87 ~Svk~~~~~~~~~~~-~~~~v~~  108 (152)
T d2pv7a2          87 TSVKREPLAKMLEVH-TGAVLGL  108 (152)
T ss_dssp             CSCCHHHHHHHHHHC-SSEEEEE
T ss_pred             cccCHHHHHHHHHHc-cCCEEEe
Confidence            776433333333322 3455543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=89.57  E-value=0.43  Score=35.32  Aligned_cols=95  Identities=18%  Similarity=0.118  Sum_probs=58.5

Q ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       104 ~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +..++.+||=.|+|. |..+..+++ .|. .|++++.+++..+.++.-..+.+--.....+++         ...+.||+
T Consensus        17 ~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~---------~~~~~fD~   84 (225)
T d2p7ia1          17 PFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA---------QLPRRYDN   84 (225)
T ss_dssp             GGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC---------CCSSCEEE
T ss_pred             hhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccccccc---------cccccccc
Confidence            445677899998866 666666665 477 599999999999988764322221111111111         12457999


Q ss_pred             EEEcc-----CCH-HHHHHHH-HHhccCCEEEEe
Q 022879          184 SFDCA-----GLN-KTMSTAL-GATCAGGKVCLV  210 (290)
Q Consensus       184 vid~~-----g~~-~~~~~~~-~~l~~~G~~v~~  210 (290)
                      |+-.-     ..+ ..+..+. ++|+++|.++..
T Consensus        85 I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          85 IVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            97532     212 2345565 468999988864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.55  E-value=0.25  Score=38.37  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=29.5

Q ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          107 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       107 ~~~~vlI~Ga-g--~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      +|+++||+|+ |  ++|.+.++.+...|+ .|+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            6789999987 5  799999999999999 5676666544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.39  E-value=0.32  Score=36.46  Aligned_cols=35  Identities=29%  Similarity=0.478  Sum_probs=29.9

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +..++|+|.|+|..|++++..+...|. .|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            455689999999999999999999999 68888754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.28  E-value=0.77  Score=30.62  Aligned_cols=89  Identities=26%  Similarity=0.297  Sum_probs=55.1

Q ss_pred             CCCCeEEEECCCH-----------HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHH
Q 022879          106 GPETNVLIMGAGP-----------IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  174 (290)
Q Consensus       106 ~~~~~vlI~Gag~-----------vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  174 (290)
                      ..-++|||.|+|+           .+..++.-++..|+ .++.+.++++....-..+ +++++ +..-+   .+.+.++.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lY-fePlt---~e~v~~Ii   78 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATY-IEPIH---WEVVRKII   78 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEE-CSCCC---HHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceee-eecCC---HHHHHHHH
Confidence            3457999998876           34556666667799 588888998876543222 34433 22222   22333333


Q ss_pred             HHhCCCccEEEEccCCHHHHHHHHHHhc
Q 022879          175 KAMGTGIDVSFDCAGLNKTMSTALGATC  202 (290)
Q Consensus       175 ~~~~~~~d~vid~~g~~~~~~~~~~~l~  202 (290)
                      +.  ...|.|+-..|++-.++.+.++..
T Consensus        79 ~~--E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          79 EK--ERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             HH--HCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             HH--hCcCCeEEEeeeehHhHHHHHHHH
Confidence            21  358899999998777666666544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.21  E-value=2.2  Score=28.95  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=47.1

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEe--cCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVK--VSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      .+|.|.|| |.+|+..+.++...+. +.++.++.++.+-+.++-.-......  ......++.+.+        ++.|+|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~--------~~aDiv   72 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL--------KGCDVV   72 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH--------TTCSEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh--------CCCCEE
Confidence            37889997 9999999998888776 57888888776655444332211110  001123333322        468999


Q ss_pred             EEccCC
Q 022879          185 FDCAGL  190 (290)
Q Consensus       185 id~~g~  190 (290)
                      +-+.|.
T Consensus        73 Vitag~   78 (144)
T d1mlda1          73 VIPAGV   78 (144)
T ss_dssp             EECCSC
T ss_pred             EECCCc
Confidence            999885

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=89.07  E-value=2.1  Score=33.55  Aligned_cols=115  Identities=11%  Similarity=0.169  Sum_probs=68.1

Q ss_pred             HHHHHHhc-CCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEecCCCcccHHHHH--
Q 022879           96 GVHACRRA-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV--  170 (290)
Q Consensus        96 a~~~l~~~-~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~--  170 (290)
                      |++++... .-.+..+|+...+|+.|.+.+..++..|.+.++.+  ..+++|...++.+|++-+.. ...........  
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~-~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLH-GANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECC-CSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEc-Ccccccchhhhhh
Confidence            44455442 23344556666679999999999999999755554  44567888889999875432 11101111111  


Q ss_pred             --------------------------HHHHHHhCCCccEEEEccCCHHHHH---HHHHHhccCCEEEEecc
Q 022879          171 --------------------------EKIQKAMGTGIDVSFDCAGLNKTMS---TALGATCAGGKVCLVGM  212 (290)
Q Consensus       171 --------------------------~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~  212 (290)
                                                .++.+ ....+|.+|-++|+...+.   ..++.+.+.-+++.+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~-q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQ-QDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHH-HCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHH-hcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                                      11111 2345899999988755443   34444556677777653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.07  E-value=2.6  Score=29.48  Aligned_cols=96  Identities=26%  Similarity=0.271  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEECC--CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCC-EEEecCCCcccHHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       104 ~~~~~~~vlI~Ga--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      .+..|.+||=.++  |.+|.   +.+ ..|+ .++.++.+++..+.++    .++.. .+...   ..+  ..+... ..
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~a~-~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d--~~~~~~-~~  106 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---EAA-SEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVE--VFLPEA-KA  106 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---HHH-HTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHH--HHHHHH-HH
T ss_pred             cccCCCeEEEeccccchhhh---hhh-hccc-hhhhcccCHHHHhhhhHHHHhhccccceeee---ehh--cccccc-cc
Confidence            4678889988754  55553   433 4588 5788999999887764    35543 33321   111  112211 22


Q ss_pred             hCCCccEEEEcc----CCHHHHHHHHH--HhccCCEEEEe
Q 022879          177 MGTGIDVSFDCA----GLNKTMSTALG--ATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~vid~~----g~~~~~~~~~~--~l~~~G~~v~~  210 (290)
                      .+..||+||-..    +....+..+..  .++++|.++.-
T Consensus       107 ~~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         107 QGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             TTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             cCCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            456799997432    22334444443  46778876643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.04  E-value=0.73  Score=34.46  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=27.6

Q ss_pred             CCCCeEEEECCCHHHHHHHHHH-HHCCCCeEEEEe
Q 022879          106 GPETNVLIMGAGPIGLVTMLAA-RAFGAPRIVIVD  139 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la-~~~g~~~vv~v~  139 (290)
                      -++.+|+|.|-|.+|..+++++ +..|+ ++++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4688999999999999999877 57899 577664

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.92  E-value=0.98  Score=31.72  Aligned_cols=83  Identities=17%  Similarity=0.150  Sum_probs=52.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|.|+|.|.+|...+..++.. +++.+.+.++++++.      .......+.    +.    .+    ....+|+|+.|+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~~----~~----~~----~~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDVA----DV----DK----HADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEGG----GG----GG----TTTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccch----hh----hh----hccccceEEEeC
Confidence            689999999998888877764 664444445544331      111222211    11    11    124699999999


Q ss_pred             CCHHHHHHHHHHhccCCEEEEe
Q 022879          189 GLNKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       189 g~~~~~~~~~~~l~~~G~~v~~  210 (290)
                      +...+...+.++|..+-.++..
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEECC
T ss_pred             CCcccHHHHHHHHHCCCcEEEe
Confidence            9877888888889887776643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.84  E-value=0.27  Score=38.71  Aligned_cols=34  Identities=32%  Similarity=0.433  Sum_probs=29.4

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .++|+|.|||..|+.++..+...|. .|.+++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            5789999999999999999988898 688887654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.80  E-value=1.6  Score=26.91  Aligned_cols=67  Identities=15%  Similarity=0.274  Sum_probs=44.7

Q ss_pred             eEEEECCCHHHHHH-HHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 022879          110 NVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  187 (290)
Q Consensus       110 ~vlI~Gag~vG~~a-i~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  187 (290)
                      +|-+.|-|++|+.+ +++++..|+ .|.+.|..+ +..+.++++|......  ...++            -.+.|+|+=+
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~g--h~~~~------------i~~~d~vV~S   67 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVP--HSADN------------WYDPDLVIKT   67 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESS--CCTTS------------CCCCSEEEEC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEee--ecccc------------cCCCCEEEEe
Confidence            56677888888755 578889999 688887775 4556778889764322  11111            1357888776


Q ss_pred             cCCH
Q 022879          188 AGLN  191 (290)
Q Consensus       188 ~g~~  191 (290)
                      ...+
T Consensus        68 sAI~   71 (89)
T d1j6ua1          68 PAVR   71 (89)
T ss_dssp             TTCC
T ss_pred             cCcC
Confidence            6543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=88.48  E-value=0.3  Score=36.91  Aligned_cols=34  Identities=26%  Similarity=0.497  Sum_probs=30.0

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ..+|+|.|+|++|..++..+...|.+.+..++.+
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4699999999999999999999999988888543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.48  E-value=0.32  Score=38.06  Aligned_cols=35  Identities=23%  Similarity=0.512  Sum_probs=29.9

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ++..+|+|.|+|..|+.++..++..|. .|.+.+.+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            456789999999999999999999999 68887654

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=88.41  E-value=2  Score=30.22  Aligned_cols=97  Identities=21%  Similarity=0.213  Sum_probs=56.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCC---eEEEEe--CChhHHHHHHHcC-------CC-------------EEEecCCCcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAP---RIVIVD--VDDYRLSVAKEIG-------AD-------------NIVKVSTNLQ  164 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~---~vv~v~--~~~~~~~~~~~lg-------~~-------------~~~~~~~~~~  164 (290)
                      +|.|.|=|-+|.++...+-..+.+   .++++.  .+.+...++-++.       ..             .+..+...++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p   82 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNP   82 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCCH
Confidence            678999999999999876543221   455554  3344444443221       10             1111111111


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          165 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      +   .+ .|   .+.++|+|+||+|.-.....+...|..+-+.|.+..+
T Consensus        83 ~---~i-~W---~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP  124 (173)
T d1obfo1          83 A---QL-PW---GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAP  124 (173)
T ss_dssp             G---GS-CT---TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSC
T ss_pred             H---HC-cc---cccccceEEEecccccCHHHHHHHhccCCcceEEecC
Confidence            1   00 01   2457999999999755566778888888777777644

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=88.31  E-value=0.51  Score=32.82  Aligned_cols=41  Identities=20%  Similarity=0.180  Sum_probs=32.7

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL  145 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~  145 (290)
                      .++..+|.|.|+|.+|...+.++...+...++.++.++++.
T Consensus         4 ~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           4 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            45678999999999999888877777776788888776543

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.27  E-value=0.85  Score=32.14  Aligned_cols=97  Identities=20%  Similarity=0.226  Sum_probs=59.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEE-eC--ChhHHHHHHHcCCC-------------E-------EEecCCCcccH
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIV-DV--DDYRLSVAKEIGAD-------------N-------IVKVSTNLQDI  166 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v-~~--~~~~~~~~~~lg~~-------------~-------~~~~~~~~~~~  166 (290)
                      +|.|.|=|-+|.++...+...+.+ ++++ +.  +.+...++-++...             .       +..++..+++ 
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~-ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~-   79 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQ-VVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE-   79 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCC-EEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG-
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCc-EEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH-
Confidence            688999999999999988888885 5555 42  34555555332110             0       0001111110 


Q ss_pred             HHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          167 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                        .+ .|   ...++|+|+||+|.-.....+...+..+-+-|.+..+.
T Consensus        80 --~i-~W---~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          80 --NI-PW---SKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             --GC-CH---HHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             --HC-Cc---cccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence              00 12   12369999999998656667778888887777776443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.22  E-value=0.49  Score=34.50  Aligned_cols=70  Identities=19%  Similarity=0.255  Sum_probs=41.3

Q ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          108 ETNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       108 ~~~vlI~Ga-g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .++|||+|+ |-+|...++.+...|.. .|++..+++..        ...-+.  ....++.+..    .......|.++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~--~~~~d~~~~~----~~~~~~~d~vi   67 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLD--NPVGPLAELL----PQLDGSIDTAF   67 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEE--CCBSCHHHHG----GGCCSCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hccccc--ccccchhhhh----hccccchheee
Confidence            379999998 99999999988888763 34444433211        110111  1122332222    22345689999


Q ss_pred             EccCCH
Q 022879          186 DCAGLN  191 (290)
Q Consensus       186 d~~g~~  191 (290)
                      +|+|..
T Consensus        68 ~~~g~~   73 (212)
T d2a35a1          68 CCLGTT   73 (212)
T ss_dssp             ECCCCC
T ss_pred             eeeeee
Confidence            998763

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.73  E-value=2.9  Score=29.26  Aligned_cols=98  Identities=9%  Similarity=0.030  Sum_probs=56.4

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecC-CCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      +|-|.|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.+........ ....+....+.     .-...+.++.++
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   76 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAA-----SLKKPRKALILV   76 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHH-----HBCSSCEEEECC
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHH-----hcccceEEEEee
Confidence            47788999999988888888899 588999999998877554422100000 00112111111     123455566655


Q ss_pred             CCHHH----HHHHHHHhccCCEEEEeccC
Q 022879          189 GLNKT----MSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       189 g~~~~----~~~~~~~l~~~G~~v~~g~~  213 (290)
                      .....    +......+.++..++..+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~iii~~st~  105 (178)
T d1pgja2          77 QAGAATDSTIEQLKKVFEKGDILVDTGNA  105 (178)
T ss_dssp             CCSHHHHHHHHHHHHHCCTTCEEEECCCC
T ss_pred             cCcchhhhhhhhhhhhccccceecccCcc
Confidence            54332    23455556666666666543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.67  E-value=2.6  Score=27.76  Aligned_cols=92  Identities=14%  Similarity=0.123  Sum_probs=58.4

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      ++++|.|.|.+|+..++.++  +. .+++++.++++.+.++..|...+ .-+..+   .+.+++   .+-...+.++-++
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i-~Gd~~~---~~~L~~---a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFV-HGDPTR---VSDLEK---ANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEE-ESCTTS---HHHHHH---TTCTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCcccc-ccccCC---HHHHHH---hhhhcCcEEEEec
Confidence            46889999999998877664  44 46778889988888888776543 322222   233333   2446788998888


Q ss_pred             CCHHH---HHHHHHHhccCCEEEEe
Q 022879          189 GLNKT---MSTALGATCAGGKVCLV  210 (290)
Q Consensus       189 g~~~~---~~~~~~~l~~~G~~v~~  210 (290)
                      ..+..   .-...+.+.|..+++..
T Consensus        71 ~~d~~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          71 ESDSETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             SSHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred             cchhhhHHHHHHHHHHCCCceEEEE
Confidence            76432   22344455666555544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.66  E-value=0.18  Score=35.00  Aligned_cols=83  Identities=11%  Similarity=-0.011  Sum_probs=48.5

Q ss_pred             EEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEccCCH
Q 022879          112 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN  191 (290)
Q Consensus       112 lI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  191 (290)
                      -+.|+|.+|.+.++.++. +.....+.+++.++.+.+.+.+.....+   . .+           .-...|+||-|+.. 
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~---~-~~-----------~~~~~DiVil~v~d-   65 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAAT---L-EK-----------HPELNGVVFVIVPD-   65 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCS---S-CC-----------CCC---CEEECSCT-
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccc---h-hh-----------hhccCcEEEEeccc-
Confidence            356999999988876655 3434456788888877666654332211   1 11           12357999999985 


Q ss_pred             HHHHHHHHHhccCC-EEEEec
Q 022879          192 KTMSTALGATCAGG-KVCLVG  211 (290)
Q Consensus       192 ~~~~~~~~~l~~~G-~~v~~g  211 (290)
                      ..+......++..+ .++++.
T Consensus        66 ~~i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          66 RYIKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             TTHHHHHTTTCCSSCCEEECC
T ss_pred             hhhhHHHhhhcccceeeeecc
Confidence            56677777776444 445554

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.61  E-value=1.1  Score=30.72  Aligned_cols=38  Identities=16%  Similarity=0.156  Sum_probs=28.3

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  148 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  148 (290)
                      +|-|.|.|.+|+..+.-+...|. .+++.+....+....
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHH
Confidence            57788999999999998888898 566665555444433

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.47  E-value=0.42  Score=37.30  Aligned_cols=43  Identities=19%  Similarity=0.127  Sum_probs=31.9

Q ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHHcC
Q 022879          109 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIG  152 (290)
Q Consensus       109 ~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~lg  152 (290)
                      ++|||+|+ |-+|...+..+...|. .|+++++..  .+.+.++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhc
Confidence            58999998 9999999998888899 578876543  2234444554

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.41  E-value=0.84  Score=30.07  Aligned_cols=87  Identities=17%  Similarity=0.217  Sum_probs=51.3

Q ss_pred             CCCeEEEECCCH-----------HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHH
Q 022879          107 PETNVLIMGAGP-----------IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       107 ~~~~vlI~Gag~-----------vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ..++|||.|+|+           .+..++.-+|..|+ .++.+.++++....-..+ +++++ +..-  . .+.+.++.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lY-fepl--t-~e~v~~Ii~   76 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLY-FEPV--T-LEDVLEIVR   76 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEE-CCCC--S-HHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceE-EccC--C-HHHHHHHHH
Confidence            457899998876           34566666777899 688888988876532221 34433 2221  1 223333322


Q ss_pred             HhCCCccEEEEccCCHHHHHHHHHHh
Q 022879          176 AMGTGIDVSFDCAGLNKTMSTALGAT  201 (290)
Q Consensus       176 ~~~~~~d~vid~~g~~~~~~~~~~~l  201 (290)
                        ..+.|.|+-..|++..++.+..+-
T Consensus        77 --~E~p~~ii~~~GGQtalnla~~L~  100 (121)
T d1a9xa4          77 --IEKPKGVIVQYGGQTPLKLARALE  100 (121)
T ss_dssp             --HHCCSEEECSSSTHHHHTTHHHHH
T ss_pred             --HhCCCEEEeehhhhhHHHHHHHHH
Confidence              134688888888876655554433

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.30  E-value=1.2  Score=33.32  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=27.6

Q ss_pred             CCCCeEEEECCCHHHHHHHHHH-HHCCCCeEEEEeC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAA-RAFGAPRIVIVDV  140 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la-~~~g~~~vv~v~~  140 (290)
                      -+|.+|+|.|-|.+|..+++++ +..|+ ++++++.
T Consensus        30 l~g~~v~IqGfGnVG~~~a~~L~~~~G~-kvv~vsD   64 (239)
T d1gtma1          30 LKGKTIAIQGYGNAGYYLAKIMSEDFGM-KVVAVSD   64 (239)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEEEC
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCc-ceeeccc
Confidence            3789999999999999999876 46788 5776643

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=87.29  E-value=1.4  Score=32.46  Aligned_cols=48  Identities=21%  Similarity=0.241  Sum_probs=37.0

Q ss_pred             HHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879           94 SVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus        94 ~ta~~~l~~-~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +.-+.+++. ..--..+++++.|+|+.|...+++....+.+.++.+++.
T Consensus        11 Agll~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          11 AAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHHHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            334445554 333466899999999999999999999999999998765

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.23  E-value=3.8  Score=31.25  Aligned_cols=98  Identities=19%  Similarity=0.226  Sum_probs=57.7

Q ss_pred             cCCCCCCeEEEECC--CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHH
Q 022879          103 ANIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       103 ~~~~~~~~vlI~Ga--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      ...+++++||=..|  |+=..   +++..+.-..+++++.++.|...+    +.+|...+..... +.....    .  .
T Consensus        98 L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~-~~~~~~----~--~  167 (284)
T d1sqga2          98 LAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD-GRYPSQ----W--C  167 (284)
T ss_dssp             HCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC-TTCTHH----H--H
T ss_pred             cCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecc-ccccch----h--c
Confidence            46789999998743  44333   444444334799999999987665    4577653332211 122111    1  1


Q ss_pred             hCCCccEE-EE--ccCCH-------------------------HHHHHHHHHhccCCEEEEe
Q 022879          177 MGTGIDVS-FD--CAGLN-------------------------KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       177 ~~~~~d~v-id--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  210 (290)
                      ....||.| +|  |+|..                         ..+..+++.++++|++|..
T Consensus       168 ~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         168 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            34568877 45  55542                         1345566778888877754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=87.12  E-value=3.5  Score=28.78  Aligned_cols=98  Identities=9%  Similarity=0.029  Sum_probs=56.7

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEEcc
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  188 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  188 (290)
                      ..|-+.|.|.+|...+.-+...|+ .|++.++++++.+.+.+-++.....  ...... +.+.+.    -...|.++-++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~--~~a~~~-~~~~~~----~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGTKV--LGAHSL-EEMVSK----LKKPRRIILLV   74 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTSSC--EECSSH-HHHHHH----BCSSCEEEECS
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhccccccc--cchhhh-hhhhhh----hcccceEEEec
Confidence            468889999999888887777899 5889999999888776544321000  000111 111111    23456666665


Q ss_pred             CCHHH----HHHHHHHhccCCEEEEeccCC
Q 022879          189 GLNKT----MSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       189 g~~~~----~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      .....    ...+...++++-.++.++...
T Consensus        75 ~~~~~v~~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          75 KAGQAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             CTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             CchHHHHHHHHHHHhccccCcEEEecCcch
Confidence            54332    233444555566666665443

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.86  E-value=0.31  Score=31.15  Aligned_cols=24  Identities=25%  Similarity=0.340  Sum_probs=19.1

Q ss_pred             eeEEEEEeCCCCC----------CCCCCCEEEEc
Q 022879            7 CAGVIEKVGSEVK----------TLVPGDRVALE   30 (290)
Q Consensus         7 ~~G~V~~vG~~v~----------~~~~Gd~V~~~   30 (290)
                      ..|+|+++|++..          ..++||+|+..
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            4699999998642          47899999863

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.69  E-value=0.53  Score=31.12  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=29.6

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      +.+++++|.|+|.+|.-+++.+..+|. .|..+...+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            345799999999999999999999999 577776543

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=86.67  E-value=1.3  Score=31.95  Aligned_cols=90  Identities=14%  Similarity=0.204  Sum_probs=58.9

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +.++.+||=.|+|. |..+..+     . .+++++.+++..+.+++-+... +..+.  .++.        ...+.||+|
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~-~~~d~--~~l~--------~~~~~fD~I   95 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFV-LKGTA--ENLP--------LKDESFDFA   95 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEE-EECBT--TBCC--------SCTTCEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhccccccccccc-ccccc--cccc--------ccccccccc
Confidence            45667899888754 5444444     2 3589999999999998865443 32221  1110        124579999


Q ss_pred             EEccCC------HHHHHHHHHHhccCCEEEEecc
Q 022879          185 FDCAGL------NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       185 id~~g~------~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      +..-.-      ...+..+.+.|+|+|.++....
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            874321      2467889999999999987653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=86.57  E-value=2.1  Score=31.35  Aligned_cols=92  Identities=20%  Similarity=0.157  Sum_probs=57.3

Q ss_pred             CeEEEECCCHHHH-HHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCC--EEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          109 TNVLIMGAGPIGL-VTMLAARA-FGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       109 ~~vlI~Gag~vG~-~ai~la~~-~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      -+|.|.|+|.+|. ..+...+. -+++.+.++++++++.+ +.++++..  .+..++    ++.+.+      ....+|+
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~----d~~ell------~~~~iD~  103 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS----NFDKIA------KDPKIDA  103 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS----SGGGGG------GCTTCCE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC----chhhhc------cccccee
Confidence            3788889999986 34444443 36754445677777655 55667643  222222    222222      3457999


Q ss_pred             EEEccCCHHHHHHHHHHhccCCEEEEec
Q 022879          184 SFDCAGLNKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       184 vid~~g~~~~~~~~~~~l~~~G~~v~~g  211 (290)
                      |+-++....+...+..++. .|.-+.+.
T Consensus       104 V~I~tp~~~H~~~~~~al~-~gk~v~~E  130 (221)
T d1h6da1         104 VYIILPNSLHAEFAIRAFK-AGKHVMCE  130 (221)
T ss_dssp             EEECSCGGGHHHHHHHHHH-TTCEEEEC
T ss_pred             eeeccchhhhhhHHHHhhh-cchhhhcC
Confidence            9999998777777877886 45666664

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.57  E-value=0.17  Score=36.47  Aligned_cols=34  Identities=24%  Similarity=0.395  Sum_probs=28.3

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ++..|+|.|+|+.|+.++..+...|.+ ++.++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~-v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQ-PVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCC-CEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEEee
Confidence            456799999999999999999999995 6777544

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=86.08  E-value=0.42  Score=33.85  Aligned_cols=29  Identities=28%  Similarity=0.464  Sum_probs=25.3

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      |+|.|+|+.|+.++..+...|.+ +..++.
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~~-v~iie~   32 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGIR-TGLMGE   32 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHcCCe-EEEEEE
Confidence            78889999999999999999995 777764

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.05  E-value=2.7  Score=30.04  Aligned_cols=106  Identities=16%  Similarity=0.166  Sum_probs=60.9

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEecCCCcccHHHHHHHHHHHhC
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  178 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (290)
                      ..+++++.++=.+.|. |-.+..+++...-..+++++.+++..+.+++    ++.. +..+...-.++...+..+   +.
T Consensus        19 l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r-~~~~~~~f~~~~~~~~~~---~~   93 (192)
T d1m6ya2          19 LKPEDEKIILDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDR-VSLFKVSYREADFLLKTL---GI   93 (192)
T ss_dssp             HCCCTTCEEEETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTT-EEEEECCGGGHHHHHHHT---TC
T ss_pred             hCCCCCCEEEEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhcccccc-ccchhHHHhhHHHHHHHc---CC
Confidence            4677877664433344 3344455565533479999999999988865    3322 222222223333333322   34


Q ss_pred             CCccEEEEccCCH---------------HHHHHHHHHhccCCEEEEeccC
Q 022879          179 TGIDVSFDCAGLN---------------KTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       179 ~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      ..+|.|+=-.|-+               ..+..+.+.|+++|+++.+...
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            6788875444431               2455677778888888876543

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=86.03  E-value=1.6  Score=34.51  Aligned_cols=62  Identities=18%  Similarity=0.081  Sum_probs=40.6

Q ss_pred             HHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC---ChhHHHHHHHcCCCEEE
Q 022879           96 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV---DDYRLSVAKEIGADNIV  157 (290)
Q Consensus        96 a~~~l~~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~  157 (290)
                      +++++..+..+..+++++..+|+-|.+++..|+..|.+.++.+..   +.++...++.+|+.-+.
T Consensus        65 a~~~i~~a~~~g~~~iv~~SsGN~g~a~a~~a~~~g~~~~i~~p~~~~~~~~~~~~~~~Ga~vi~  129 (351)
T d1v7ca_          65 MTLAVSKAVEGGAQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQ  129 (351)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTCSCHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHhcCCCeeeeeccccHHHHHHHHHhhhcccceeecCCchHHHHHHHhhhcCCCceEe
Confidence            344444332234556666667999999999999999975555532   23555668889987543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=85.98  E-value=0.92  Score=35.41  Aligned_cols=100  Identities=19%  Similarity=0.255  Sum_probs=62.3

Q ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHH-----------
Q 022879          111 VLIM-GAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA-----------  176 (290)
Q Consensus       111 vlI~-Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-----------  176 (290)
                      .++. .+|+.|.+++..|+.+|.+.++.+  ..++.+.+.++.+|++-+.. ....++.....++..+.           
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~-~~~~~~~~~~a~~~a~~~g~~~~~~~~~  149 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMY-DRYKDDREKMAKEISEREGLTIIPPYDH  149 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEE-CTTTTCHHHHHHHHHHHHTCBCCCSSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEec-cCCchHHHHHHHHHHHhcCCEecCCccc
Confidence            3555 459999999999999999865555  44567888889999875543 22222332222232211           


Q ss_pred             ----------------hCCCccEEEEccCCHHHH---HHHHHHhccCCEEEEec
Q 022879          177 ----------------MGTGIDVSFDCAGLNKTM---STALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ----------------~~~~~d~vid~~g~~~~~---~~~~~~l~~~G~~v~~g  211 (290)
                                      .-..+|.+|-++|+...+   ...++.+.+..+++.+.
T Consensus       150 ~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         150 PHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cccccccchHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence                            012478888888775433   33445566777777664

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=85.81  E-value=0.41  Score=36.12  Aligned_cols=33  Identities=24%  Similarity=0.448  Sum_probs=27.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  143 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~  143 (290)
                      -|+|.|+|+.|++++-.+...|. .|.+++..++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            47889999999999888888898 5888877653

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.67  E-value=0.42  Score=35.76  Aligned_cols=31  Identities=32%  Similarity=0.739  Sum_probs=26.2

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      |+|.|+|..|++++..+...|. +|+.++..+
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7888999999988888888899 588887654

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.66  E-value=4.5  Score=28.58  Aligned_cols=104  Identities=15%  Similarity=0.241  Sum_probs=63.5

Q ss_pred             cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          103 ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       103 ~~~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      ..+++|..+ |-++ |+=|+ ...+++. +. ++++++.+++....++.+-...+..++..-.++.+.+...   .-..+
T Consensus        14 l~~~~g~~~-vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~---~~~~v   86 (182)
T d1wg8a2          14 LAVRPGGVY-VDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAAL---GVERV   86 (182)
T ss_dssp             HTCCTTCEE-EETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHT---TCSCE
T ss_pred             cCCCCCCEE-EEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHc---CCCcc
Confidence            456777764 4444 44344 4455554 44 7999999999988887754333333333334444433332   34568


Q ss_pred             cEEEEccCCHH---------------HHHHHHHHhccCCEEEEeccC
Q 022879          182 DVSFDCAGLNK---------------TMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       182 d~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~  213 (290)
                      |.|+=-.|.+.               .+....+.++++|+++.+...
T Consensus        87 dgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fh  133 (182)
T d1wg8a2          87 DGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFH  133 (182)
T ss_dssp             EEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred             CEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecc
Confidence            87765445432               356778889999998877654

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.62  E-value=3  Score=32.40  Aligned_cols=99  Identities=24%  Similarity=0.339  Sum_probs=59.4

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ..+++|++||=..|++ |.=+.+++..++- ..+++.+.+++|...+    +.+|...++........+.        ..
T Consensus       112 l~~~~g~~vlD~CAap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~--------~~  182 (313)
T d1ixka_         112 LDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG--------EL  182 (313)
T ss_dssp             HCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG--------GG
T ss_pred             ccCCccceeeecccch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc--------cc
Confidence            4689999988763322 2234445554433 2589999999887665    4577665554433222111        12


Q ss_pred             CCCccEEE-E--ccCCH-------------------------HHHHHHHHHhccCCEEEEe
Q 022879          178 GTGIDVSF-D--CAGLN-------------------------KTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       178 ~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  210 (290)
                      ...||.|+ |  |+|..                         ..+..+++.++++|++|..
T Consensus       183 ~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs  243 (313)
T d1ixka_         183 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  243 (313)
T ss_dssp             CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence            45688774 4  55542                         1456688889999987654

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=85.61  E-value=1.8  Score=32.37  Aligned_cols=100  Identities=17%  Similarity=0.175  Sum_probs=59.4

Q ss_pred             hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHHh
Q 022879          102 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAM  177 (290)
Q Consensus       102 ~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      ...+....+||=.|+|. |..++.+++...--.+++++.+ +..+.+    ...+....+.+..  .|+.       +..
T Consensus        75 ~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~--~D~~-------~~~  143 (253)
T d1tw3a2          75 AYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVE--GDFF-------EPL  143 (253)
T ss_dssp             HSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEE--CCTT-------SCC
T ss_pred             hcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcc--ccch-------hhc
Confidence            34567778999888865 7888899988743367778764 333333    2333211111101  1110       012


Q ss_pred             CCCccEEEEcc-----CCH---HHHHHHHHHhccCCEEEEecc
Q 022879          178 GTGIDVSFDCA-----GLN---KTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       178 ~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      ..++|+|+-..     ..+   ..+..+.+.|+|+|+++....
T Consensus       144 ~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         144 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             ccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            34689987532     111   347788899999999998753

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.53  E-value=1.8  Score=33.73  Aligned_cols=48  Identities=27%  Similarity=0.428  Sum_probs=36.3

Q ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEE
Q 022879          110 NVLIMG-AGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus       110 ~vlI~G-ag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~  157 (290)
                      .-+|.. +|+.|.+.+..|+.+|.+.++.+  ..++.|.+.++.+|+.-+.
T Consensus        55 ~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~v~~  105 (319)
T d1p5ja_          55 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKV  105 (319)
T ss_dssp             CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccccceecccc
Confidence            345565 59999999999999999866655  3445778888889886544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.44  E-value=0.46  Score=35.09  Aligned_cols=31  Identities=19%  Similarity=0.353  Sum_probs=27.0

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      |+|.|+|..|+.++..+...|. +|.+++.++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7888999999999999988998 588887764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.40  E-value=0.81  Score=33.22  Aligned_cols=40  Identities=25%  Similarity=0.404  Sum_probs=34.4

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      +|.|.|+|-+|+..+..+...|. .|++.+.++++.+.+..
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47888999999988888888898 69999999998887765

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.28  E-value=3  Score=29.34  Aligned_cols=91  Identities=12%  Similarity=0.111  Sum_probs=49.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHHHHcCCCEEEe--cC----CCcccHHHHHHHHHHHhCCCc
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVAKEIGADNIVK--VS----TNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      +|.|.|+|..|.+.+..+...|. .|....+.  ++..+.+..-.....+.  ..    ....+..+.+        ...
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~a   72 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL--------ENA   72 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH--------TTC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH--------hcc
Confidence            57889999999988888887787 56666553  23333332211100000  00    0112222222        458


Q ss_pred             cEEEEccCCHHHHHHHHHHhcc---CCEEEEe
Q 022879          182 DVSFDCAGLNKTMSTALGATCA---GGKVCLV  210 (290)
Q Consensus       182 d~vid~~g~~~~~~~~~~~l~~---~G~~v~~  210 (290)
                      |+|+-++.. ..+...++.+.+   ...++.+
T Consensus        73 d~Ii~avps-~~~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          73 EVVLLGVST-DGVLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             SEEEECSCG-GGHHHHHHHHTTTCCSCEEEEC
T ss_pred             chhhcccch-hhhHHHHHhhccccccceeccc
Confidence            999999997 455555555444   2455444

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.21  E-value=1.1  Score=30.92  Aligned_cols=38  Identities=21%  Similarity=0.351  Sum_probs=31.8

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  144 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~  144 (290)
                      |..+|-|.|+|.+|...+.++...+...++.++.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            45689999999999988888888888888888877654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.21  E-value=0.7  Score=33.23  Aligned_cols=88  Identities=18%  Similarity=0.185  Sum_probs=57.5

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  186 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  186 (290)
                      .+.+|.|.|.|.+|...+++++.+|+ .|+..+......       ......+    .++.+.++        ..|++.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~ell~--------~sDii~i  102 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV----QHLSDLLN--------MSDVVSL  102 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC----SCHHHHHH--------HCSEEEE
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh----hhHHHHHh--------hccceee
Confidence            57899999999999999999999999 688886643321       1111111    23332222        2588877


Q ss_pred             ccCCHH-----HHHHHHHHhccCCEEEEeccCC
Q 022879          187 CAGLNK-----TMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       187 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +....+     .-...++.++++..+|..+...
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG~  135 (188)
T d1sc6a1         103 HVPENPSTKNMMGAKEISLMKPGSLLINASRGT  135 (188)
T ss_dssp             CCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSS
T ss_pred             cccCCcchhhhccHHHHhhCCCCCEEEEcCcHH
Confidence            665322     1235778888888888887543

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.09  E-value=0.45  Score=34.81  Aligned_cols=30  Identities=30%  Similarity=0.595  Sum_probs=25.7

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      |+|.|+|+.|+.++..+..+|. +|++++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            6788999999999999999999 57777654

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.89  E-value=1.7  Score=34.92  Aligned_cols=91  Identities=14%  Similarity=0.120  Sum_probs=60.4

Q ss_pred             CCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH---c-CCCE--------------EEecCCCcccHHHHHHHHHHH
Q 022879          115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE---I-GADN--------------IVKVSTNLQDIAEEVEKIQKA  176 (290)
Q Consensus       115 Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---l-g~~~--------------~~~~~~~~~~~~~~~~~~~~~  176 (290)
                      +-++.|.-++.+++..|.+.|+..+.+++..+.+++   + +...              .+..  ...|....    ...
T Consensus        52 ~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~--~~~Da~~~----~~~  125 (375)
T d2dula1          52 ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVI--NHDDANRL----MAE  125 (375)
T ss_dssp             SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEE--EESCHHHH----HHH
T ss_pred             cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEe--ehhhhhhh----hHh
Confidence            335568888999998899889999999999888864   1 1111              0000  11222222    223


Q ss_pred             hCCCccEE-EEccCCH-HHHHHHHHHhccCCEEEEec
Q 022879          177 MGTGIDVS-FDCAGLN-KTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       177 ~~~~~d~v-id~~g~~-~~~~~~~~~l~~~G~~v~~g  211 (290)
                      .+..||+| +|..|++ ..++.+++.++.+|-+....
T Consensus       126 ~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         126 RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence            45679977 8998884 46778999999888776554

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=84.71  E-value=2.9  Score=30.90  Aligned_cols=93  Identities=8%  Similarity=0.011  Sum_probs=55.3

Q ss_pred             CeEEEECCCH----HHHHHHHHHHHC--CCCeEEEEeCChhHHH-HHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCc
Q 022879          109 TNVLIMGAGP----IGLVTMLAARAF--GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  181 (290)
Q Consensus       109 ~~vlI~Gag~----vG~~ai~la~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (290)
                      =+|.|.|.|.    ++..-+...+..  +++.+.+.+.+.++.+ +.++++......|+    ++.+.+      ....+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~~l~------~~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD----SLESFA------QYKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES----CHHHHH------HCTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec----chhhcc------ccccc
Confidence            4788988765    444434444443  5643334566665544 56777754332222    333322      24579


Q ss_pred             cEEEEccCCHHHHHHHHHHhccC-----CEEEEec
Q 022879          182 DVSFDCAGLNKTMSTALGATCAG-----GKVCLVG  211 (290)
Q Consensus       182 d~vid~~g~~~~~~~~~~~l~~~-----G~~v~~g  211 (290)
                      |+|+.++....+......+|..+     ++-+.+.
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~E  121 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVE  121 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEE
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEe
Confidence            99999999777777777777654     4566665

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.70  E-value=0.39  Score=36.70  Aligned_cols=31  Identities=29%  Similarity=0.485  Sum_probs=26.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +|+|.|+|..|+.++..+...|. .|.+++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            58999999999999999999999 58888664

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.64  E-value=2.6  Score=27.86  Aligned_cols=61  Identities=18%  Similarity=0.276  Sum_probs=46.8

Q ss_pred             HHHHhcCCCCCCeEEEE-CCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 022879           98 HACRRANIGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  158 (290)
Q Consensus        98 ~~l~~~~~~~~~~vlI~-Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  158 (290)
                      ..++.+++..-+.+++. ..-..-..+.++++.+|.+.+++...+++..+.++.+|++.+++
T Consensus        56 ~~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          56 KTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            34566777777766665 44445567888999999988888888888888999999998874

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.56  E-value=1.6  Score=33.03  Aligned_cols=46  Identities=15%  Similarity=0.192  Sum_probs=32.7

Q ss_pred             cCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879          103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus       103 ~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      .+...|.++|=.|+|+ |...+..+...+ ..|++++-++...+.+++
T Consensus        50 ~g~~~g~~vLDiGcG~-g~~~~~~~~~~~-~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          50 TGEVSGRTLIDIGSGP-TVYQLLSACSHF-EDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             TSCSCCSEEEEETCTT-CCGGGTTGGGGC-SEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCcEEEEeccCC-CHHHHHHhcccC-CeEEEEeCCHHHHHHHHH
Confidence            3556788999999865 433333333434 479999999999998875

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.40  E-value=2.4  Score=28.94  Aligned_cols=71  Identities=17%  Similarity=0.237  Sum_probs=42.8

Q ss_pred             CCCeEEEECC--CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE-EEecCCCcccHHHHHHHHHHHhCC
Q 022879          107 PETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAMGT  179 (290)
Q Consensus       107 ~~~~vlI~Ga--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  179 (290)
                      +|.+||=.++  |.+|.   +. ..+|++.|+.++.+++..+.+++    ++... +..+.   .|....+.    ....
T Consensus        14 ~g~~vlDl~~GtG~~~i---ea-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~---~D~~~~l~----~~~~   82 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI---EA-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAID----CLTG   82 (152)
T ss_dssp             CSCEEEEETCTTCHHHH---HH-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHH----HBCS
T ss_pred             CCCeEEEcCCccCHHHH---HH-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc---cccccccc----cccc
Confidence            5788887754  55555   33 34688899999999888766543    55332 22222   23333332    2456


Q ss_pred             CccEEEEcc
Q 022879          180 GIDVSFDCA  188 (290)
Q Consensus       180 ~~d~vid~~  188 (290)
                      .||+||--.
T Consensus        83 ~fDiIf~DP   91 (152)
T d2esra1          83 RFDLVFLDP   91 (152)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEech
Confidence            799997643

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=84.27  E-value=0.63  Score=35.55  Aligned_cols=30  Identities=27%  Similarity=0.577  Sum_probs=22.8

Q ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      +|||+|+ |-+|...+..+...|.  +++++..
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECC
Confidence            5899988 9999999888777764  4555443

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.93  E-value=0.57  Score=34.19  Aligned_cols=30  Identities=17%  Similarity=0.516  Sum_probs=26.0

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      |+|.|+|+.|+.++..+..+|. +|..++..
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 47777664

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.86  E-value=0.59  Score=36.10  Aligned_cols=32  Identities=25%  Similarity=0.352  Sum_probs=26.1

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      .|+|.|+|.+|.+++..+...|.+.|.+++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            68999999999988877777897568888765

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=83.79  E-value=0.76  Score=29.06  Aligned_cols=23  Identities=26%  Similarity=0.310  Sum_probs=18.7

Q ss_pred             eeEEEEEeCCCCC---------CCCCCCEEEE
Q 022879            7 CAGVIEKVGSEVK---------TLVPGDRVAL   29 (290)
Q Consensus         7 ~~G~V~~vG~~v~---------~~~~Gd~V~~   29 (290)
                      ..|+|+++|++..         ..++||+|..
T Consensus        36 ~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~   67 (97)
T d1aono_          36 TRGEVLAVGNGRILENGEVKPLDVKVGDIVIF   67 (97)
T ss_dssp             CEEEEEEECSBCCTTSSCCCBCSCCTTCEEEE
T ss_pred             eeEEEEEEeeeEEccCCcCccccCCCCCEEEE
Confidence            4699999998653         3899999986

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.73  E-value=1.2  Score=33.94  Aligned_cols=104  Identities=13%  Similarity=0.120  Sum_probs=57.0

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHH----C-CCC-eEEEEeCChhHHHHHHHc-C-----CCEEEecCCCcccHHHHHHHH
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARA----F-GAP-RIVIVDVDDYRLSVAKEI-G-----ADNIVKVSTNLQDIAEEVEKI  173 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~----~-g~~-~vv~v~~~~~~~~~~~~l-g-----~~~~~~~~~~~~~~~~~~~~~  173 (290)
                      ++.-+||=.|+|. |.....+++.    . +.. .+++++.+++..+.+++. .     ....++.  ...+..+.....
T Consensus        39 ~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  115 (280)
T d1jqea_          39 KSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAW--HKETSSEYQSRM  115 (280)
T ss_dssp             CSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEE--ECSCHHHHHHHH
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccc--hhhhhhhhcchh
Confidence            3444788888644 4344444332    2 221 468889999888777542 1     1111111  112222211111


Q ss_pred             H-HHhCCCccEEEEccC-----C-HHHHHHHHHHhccCCEEEEecc
Q 022879          174 Q-KAMGTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVGM  212 (290)
Q Consensus       174 ~-~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~  212 (290)
                      . ....+.||+|+-.-.     . ...+..+.+.|+|+|.++....
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            1 113567999976322     2 3578889999999998877653

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=83.66  E-value=2.3  Score=29.70  Aligned_cols=97  Identities=25%  Similarity=0.215  Sum_probs=56.1

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCC--hhHHHHHHHc----C---CC-------------EEEecCCCcccH
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVD--DYRLSVAKEI----G---AD-------------NIVKVSTNLQDI  166 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v~~~--~~~~~~~~~l----g---~~-------------~~~~~~~~~~~~  166 (290)
                      +|.|.|-|-+|.++...+... .. .++++...  .+...++-++    |   ..             .+-.++..+++ 
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~-   80 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA-   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG-
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH-
Confidence            578889999999999987765 34 46666332  2333333222    1   00             01011111111 


Q ss_pred             HHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          167 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                       + + .|   ...++|+|+||+|.-.....+..++..+-+-|.+..+.
T Consensus        81 -~-i-~W---~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          81 -N-L-KW---DEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             -G-G-CH---HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             -H-C-Cc---cccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence             0 0 12   12369999999997655667778888887777776443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=83.21  E-value=3.4  Score=28.74  Aligned_cols=84  Identities=18%  Similarity=0.155  Sum_probs=56.4

Q ss_pred             HHHHhcC-CCCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHH
Q 022879           98 HACRRAN-IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus        98 ~~l~~~~-~~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ..++..+ .-.|++++|.|- ..+|.-...++...|+ .|....+                     .+.+..+.++    
T Consensus        26 ~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~---------------------~t~~l~~~~~----   79 (166)
T d1b0aa1          26 TLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHR---------------------FTKNLRHHVE----   79 (166)
T ss_dssp             HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECS---------------------SCSCHHHHHH----
T ss_pred             HHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccc---------------------ccchhHHHHh----
Confidence            3344433 347899999987 7799999999999999 4554422                     1223332322    


Q ss_pred             HhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccC
Q 022879          176 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  213 (290)
Q Consensus       176 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  213 (290)
                          ..|+++-++|.+..+.  -+.++++..++.+|..
T Consensus        80 ----~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          80 ----NADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ----HCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ----hhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence                3799999999864433  2467888888888853

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.14  E-value=0.73  Score=33.59  Aligned_cols=30  Identities=37%  Similarity=0.709  Sum_probs=25.6

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ++|.|+|+.|+.++..+...|. ++..++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            6778999999999999999999 57777654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=82.94  E-value=2  Score=30.99  Aligned_cols=92  Identities=20%  Similarity=0.212  Sum_probs=51.5

Q ss_pred             CChhhhhhhhhhHHH-HHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEe
Q 022879           82 VSLEEGAMCEPLSVG-VHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GADNIVK  158 (290)
Q Consensus        82 ~~~~~aa~~~~~~ta-~~~l~-~~~~~~~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~  158 (290)
                      +..++..+.+..+.. +..+. ..++ .|++||=.|+|+ |..++. +...|++.|++++.+++..+.+++- ....++.
T Consensus        22 ~~leQy~T~~~~a~~~~~~~~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~   98 (197)
T d1ne2a_          22 NYLEQYPTDASTAAYFLIEIYNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMV   98 (197)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEE
T ss_pred             cccccCCCCHHHHHHHHHHHHHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEE
Confidence            344555544433321 12222 3444 589999988754 555544 4446877899999999999888773 3223333


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEccC
Q 022879          159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  189 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  189 (290)
                      -     |+    .+    -.+.||+||-...
T Consensus        99 ~-----D~----~~----l~~~fD~Vi~NPP  116 (197)
T d1ne2a_          99 A-----DV----SE----ISGKYDTWIMNPP  116 (197)
T ss_dssp             C-----CG----GG----CCCCEEEEEECCC
T ss_pred             E-----eh----hh----cCCcceEEEeCcc
Confidence            1     21    11    2457999987643

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.84  E-value=1.6  Score=34.17  Aligned_cols=34  Identities=24%  Similarity=0.244  Sum_probs=28.6

Q ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          106 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       106 ~~~~~vlI~Ga-g~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      ...+++||+|+ |-+|...+..+...|. .|++++.
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            34578999988 9999999999999999 5888753

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.82  E-value=1.1  Score=31.46  Aligned_cols=28  Identities=32%  Similarity=0.470  Sum_probs=25.1

Q ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCe
Q 022879          107 PETNVLIMGAGPIGLVTMLAARAFGAPR  134 (290)
Q Consensus       107 ~~~~vlI~Gag~vG~~ai~la~~~g~~~  134 (290)
                      .+++|+|.|+|.+|.-++.-++.+|.+.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v   29 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEG   29 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCS
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCce
Confidence            5789999999999999999999999863

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

Probab=82.76  E-value=5  Score=30.74  Aligned_cols=50  Identities=22%  Similarity=0.398  Sum_probs=36.4

Q ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEE
Q 022879          108 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV  157 (290)
Q Consensus       108 ~~~vlI~Gag~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~  157 (290)
                      ...|+...+|+.|.+++..|+.+|.+.++++  ..++++...++.+|+..+.
T Consensus        64 ~~~vv~aSsGN~g~a~A~~aa~~G~~~~i~vp~~~~~~~~~~~~~~Ga~vi~  115 (310)
T d1ve5a1          64 PKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVD  115 (310)
T ss_dssp             CCCEEEECSSHHHHHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEEC
T ss_pred             cCCccccCchhhHHHHHHHHHHcCCeEEEeecccchHHHHHHHhhhccccce
Confidence            3445445679999999999999999755555  3446778888999986554

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.42  E-value=0.81  Score=33.71  Aligned_cols=31  Identities=32%  Similarity=0.565  Sum_probs=26.4

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      |+|.|+|+.|+.++..+..+|. +|..++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            6778999999999999999999 578887543

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=82.29  E-value=6.8  Score=28.10  Aligned_cols=94  Identities=18%  Similarity=0.136  Sum_probs=59.7

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  185 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  185 (290)
                      .+|=.|.|. |..++.+|+...-..+++++-++.....+    +..+...+........++...+      ....+|.|+
T Consensus        34 lvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~------~~~~~~~i~  106 (204)
T d1yzha1          34 IHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF------EDGEIDRLY  106 (204)
T ss_dssp             EEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS------CTTCCSEEE
T ss_pred             eEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhc------cCCceehhc
Confidence            445568876 88999999997555899999998766654    3455443322222222322111      234577776


Q ss_pred             EccCC--------------HHHHHHHHHHhccCCEEEEe
Q 022879          186 DCAGL--------------NKTMSTALGATCAGGKVCLV  210 (290)
Q Consensus       186 d~~g~--------------~~~~~~~~~~l~~~G~~v~~  210 (290)
                      -....              +..+..+.+.|+++|.+...
T Consensus       107 i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         107 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             ccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            54432              35688889999999998654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.26  E-value=0.91  Score=35.68  Aligned_cols=32  Identities=25%  Similarity=0.124  Sum_probs=27.1

Q ss_pred             CeE-EEECC-CHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          109 TNV-LIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       109 ~~v-lI~Ga-g~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ++| ||+|+ |-+|...+..+...|. .|+++++.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence            367 99988 9999999998888999 68888764

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.22  E-value=0.66  Score=33.97  Aligned_cols=31  Identities=35%  Similarity=0.636  Sum_probs=26.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      .++|.|+|+.|+.++..+..+|. +|..++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47788999999999999999999 57777654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.18  E-value=0.78  Score=33.68  Aligned_cols=31  Identities=32%  Similarity=0.582  Sum_probs=25.5

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      |+|.|+|+.|+.++..+..+|.+ |+.++..+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~k-V~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGFN-TACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCc-EEEEEecC
Confidence            67889999999998888889994 77776543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.00  E-value=0.78  Score=35.66  Aligned_cols=32  Identities=28%  Similarity=0.602  Sum_probs=27.5

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .|+|.|||..|++++..++..|. .+++.+..+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            57889999999999999999999 478887654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.96  E-value=1.4  Score=28.71  Aligned_cols=66  Identities=18%  Similarity=0.215  Sum_probs=40.8

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCChhHHHHHHHcCCCEEEecCCCcccHHHHHHHHHHHhCCCccE
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAFGAP--RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  183 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~g~~--~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  183 (290)
                      +.+++++|.|+|.+|.-++..++.+|.+  .|..+.+.+.-      +.        .-+++..+.+.+..+  ..++++
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i------L~--------~~d~~~~~~l~~~l~--~~GV~v   81 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMI------LR--------GFDHTLREELTKQLT--ANGIQI   81 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS------ST--------TSCHHHHHHHHHHHH--HTTCEE
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccchh------hc--------ccchHHHHHHHHHHH--hcCcEE
Confidence            4568999999999999888777776653  46666554321      11        122444455554433  356777


Q ss_pred             EEEc
Q 022879          184 SFDC  187 (290)
Q Consensus       184 vid~  187 (290)
                      .+++
T Consensus        82 ~~~~   85 (117)
T d1aoga2          82 LTKE   85 (117)
T ss_dssp             EESC
T ss_pred             EcCC
Confidence            7765

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.85  E-value=0.57  Score=36.40  Aligned_cols=32  Identities=16%  Similarity=0.489  Sum_probs=26.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      .++|.|||..|+.++..+...|. .|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 588886653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.78  E-value=1.6  Score=29.81  Aligned_cols=89  Identities=19%  Similarity=0.199  Sum_probs=45.6

Q ss_pred             eEEEECC-CHHHHHHHH-HHHHC--CCCeEEEEeCChhHHHHHHHcCCC-EEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 022879          110 NVLIMGA-GPIGLVTML-AARAF--GAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  184 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~-la~~~--g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  184 (290)
                      +|.|.|| |.+|+-.++ |+...  -...++...++...-......... ....    ..+.    .++     .++|++
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~----~~~~----~~~-----~~~Div   69 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQD----AFDL----EAL-----KALDII   69 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEE----TTCH----HHH-----HTCSEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeec----ccch----hhh-----hcCcEE
Confidence            6889998 999999997 45432  222445454443221111111111 1111    1111    111     368999


Q ss_pred             EEccCCHHHHHHHHHHhccCC---EEEEecc
Q 022879          185 FDCAGLNKTMSTALGATCAGG---KVCLVGM  212 (290)
Q Consensus       185 id~~g~~~~~~~~~~~l~~~G---~~v~~g~  212 (290)
                      |-|++. +........+...|   .++..+.
T Consensus        70 F~a~~~-~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          70 VTCQGG-DYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             EECSCH-HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEecCc-hHHHHhhHHHHhcCCCeecccCCc
Confidence            999996 44444445444444   4666653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.38  E-value=1.5  Score=31.34  Aligned_cols=39  Identities=18%  Similarity=0.358  Sum_probs=31.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  150 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  150 (290)
                      +|.|.|.|-+|+..+.++ +.|. .|++++.++++.+.++.
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            577889999998876655 5688 79999999999887754

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.31  E-value=1.7  Score=31.85  Aligned_cols=101  Identities=15%  Similarity=0.140  Sum_probs=58.1

Q ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEecCCCcccHHHHHHHHHHH-hC
Q 022879          105 IGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKA-MG  178 (290)
Q Consensus       105 ~~~~~~vlI~Gag~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~  178 (290)
                      ..+.++||-.|.+. |..++.+|+++.. .++++++.+++..+.++    ..|....+.+  ...+..+.+.++... ..
T Consensus        54 ~~kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l--~~Gd~~e~l~~l~~~~~~  130 (214)
T d2cl5a1          54 EYSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTI--LNGASQDLIPQLKKKYDV  130 (214)
T ss_dssp             HHCCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEE--EESCHHHHGGGHHHHSCC
T ss_pred             hhCCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCcccee--eeccccccccchhhcccc
Confidence            34557899998744 6677888887632 27999999998777664    3453321221  123334444444322 23


Q ss_pred             CCccEEEEccCCHH-----HHHHHHHHhccCCEEE
Q 022879          179 TGIDVSFDCAGLNK-----TMSTALGATCAGGKVC  208 (290)
Q Consensus       179 ~~~d~vid~~g~~~-----~~~~~~~~l~~~G~~v  208 (290)
                      ..+|++|--.....     .+...++.|+++|.++
T Consensus       131 ~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         131 DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             CCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             cccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            56998865432211     1233445688888655

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=81.10  E-value=6.7  Score=27.25  Aligned_cols=97  Identities=21%  Similarity=0.210  Sum_probs=57.6

Q ss_pred             eEEEECCCHHHHHHHHHHHHC-CCCeEEEE-e--CChhHHHHHHHcCCC-------------E-------EEecCCCccc
Q 022879          110 NVLIMGAGPIGLVTMLAARAF-GAPRIVIV-D--VDDYRLSVAKEIGAD-------------N-------IVKVSTNLQD  165 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~-g~~~vv~v-~--~~~~~~~~~~~lg~~-------------~-------~~~~~~~~~~  165 (290)
                      +|.|.|=|-+|.++...+... .. .++++ +  .+.+...++-++...             .       +..++..+++
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            688999999999999876654 45 45665 3  234555555332210             0       0001111110


Q ss_pred             HHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          166 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                         .+ .|   ...++|+|+||+|.-.....+...+..+-+-|.+..+.
T Consensus        82 ---~i-~W---~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          82 ---KI-KW---GDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             ---GC-CT---TTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             ---hC-Cc---cccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence               01 12   24579999999998555566777888887777776443

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.85  E-value=0.99  Score=32.24  Aligned_cols=31  Identities=19%  Similarity=0.289  Sum_probs=26.0

Q ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Q 022879          109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  140 (290)
Q Consensus       109 ~~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~  140 (290)
                      .+|+|.|+|+.|+.++..+...|.+ +++++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~-v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELK-PLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCc-EEEEEe
Confidence            5789999999999998888889995 666653

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.84  E-value=0.99  Score=32.83  Aligned_cols=30  Identities=33%  Similarity=0.581  Sum_probs=25.5

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Q 022879          111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  141 (290)
Q Consensus       111 vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~  141 (290)
                      ++|.|+|+.|+.++..+..+|. +|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            5778999999999999999999 47777653

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.80  E-value=3.2  Score=28.99  Aligned_cols=97  Identities=18%  Similarity=0.185  Sum_probs=55.9

Q ss_pred             eEEEECCCHHHHHHHHHHHHC---CCCeEEEEeC--ChhHHHHHHHc----C---CC-------------EEEecCCCcc
Q 022879          110 NVLIMGAGPIGLVTMLAARAF---GAPRIVIVDV--DDYRLSVAKEI----G---AD-------------NIVKVSTNLQ  164 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~---g~~~vv~v~~--~~~~~~~~~~l----g---~~-------------~~~~~~~~~~  164 (290)
                      +|.|.|-|-+|..+.+.+...   .. .++++..  +.+...++-++    |   ..             .+..+...++
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            788999999999999877643   34 4666622  33444444322    1   00             0111111111


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEccCCHHHHHHHHHHhccCCEEEEeccCC
Q 022879          165 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  214 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  214 (290)
                      +   .+ .|.   +.++|+||||+|.-.....+...+..+-+-|.+..+.
T Consensus        81 ~---~i-~W~---~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          81 S---KL-PWK---DLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             G---GS-CHH---HHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             h---hC-Ccc---ccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            1   11 121   2369999999998556677777888877667665433

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.75  E-value=10  Score=29.14  Aligned_cols=99  Identities=17%  Similarity=0.163  Sum_probs=58.9

Q ss_pred             CCCCCCeEEEECC--CHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH------cCCCEEEecCCCcccHHHHHHHHHH
Q 022879          104 NIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE------IGADNIVKVSTNLQDIAEEVEKIQK  175 (290)
Q Consensus       104 ~~~~~~~vlI~Ga--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~------lg~~~~~~~~~~~~~~~~~~~~~~~  175 (290)
                      ...++.+||=..+  |+.+.   ..++ .|+ .|+.++.++...+.+++      +....+ .+  ...|..+.+++...
T Consensus       129 ~~~~~~rVLdlf~~tG~~sl---~aa~-~GA-~V~~VD~s~~al~~a~~N~~ln~~~~~~~-~~--i~~D~~~~l~~~~~  200 (309)
T d2igta1         129 TADRPLKVLNLFGYTGVASL---VAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPI-RW--ICEDAMKFIQREER  200 (309)
T ss_dssp             HSSSCCEEEEETCTTCHHHH---HHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCE-EE--ECSCHHHHHHHHHH
T ss_pred             hccCCCeEEEecCCCcHHHH---HHHh-CCC-eEEEEeChHHHHHHHHHhhhhhcccCCcE-EE--EeCCHHHhHHHHhh
Confidence            4567889998854  55444   4443 588 69999999998888864      222111 11  12455556655432


Q ss_pred             HhCCCccEEEEccC-----C-----------HHHHHHHHHHhccCCEEEEec
Q 022879          176 AMGTGIDVSFDCAG-----L-----------NKTMSTALGATCAGGKVCLVG  211 (290)
Q Consensus       176 ~~~~~~d~vid~~g-----~-----------~~~~~~~~~~l~~~G~~v~~g  211 (290)
                       .+..||+||---.     .           ...+..+..++.++|.++.+.
T Consensus       201 -~~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t  251 (309)
T d2igta1         201 -RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT  251 (309)
T ss_dssp             -HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred             -cCCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence             4678999974211     0           113344566788888765553

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=80.64  E-value=7.9  Score=30.46  Aligned_cols=29  Identities=38%  Similarity=0.484  Sum_probs=22.9

Q ss_pred             eEEEECC-CHHHHHHHH-HHHHCCCCeEEEEe
Q 022879          110 NVLIMGA-GPIGLVTML-AARAFGAPRIVIVD  139 (290)
Q Consensus       110 ~vlI~Ga-g~vG~~ai~-la~~~g~~~vv~v~  139 (290)
                      +|||+|+ |-+|...+. |++..|. .|++++
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D   34 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNH-SVVIVD   34 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCC-EEEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEe
Confidence            7999988 999977665 5567788 688875

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.31  E-value=0.72  Score=36.25  Aligned_cols=32  Identities=34%  Similarity=0.591  Sum_probs=24.3

Q ss_pred             eEEEECCCHHHHHHHHHH-----HHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAA-----RAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la-----~~~g~~~vv~v~~~~  142 (290)
                      -|+|.|+|.+|++++.++     +..|. .|++++..+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            378999999998887766     35688 477876543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=80.26  E-value=1.6  Score=28.31  Aligned_cols=35  Identities=17%  Similarity=0.233  Sum_probs=25.5

Q ss_pred             CCCCeEEEECCCHHHHHHHHHHHHC---CCCeEEEEeCC
Q 022879          106 GPETNVLIMGAGPIGLVTMLAARAF---GAPRIVIVDVD  141 (290)
Q Consensus       106 ~~~~~vlI~Gag~vG~~ai~la~~~---g~~~vv~v~~~  141 (290)
                      +.+++++|.|+|.+|.-+++++..+   |. .|..+.+.
T Consensus        16 ~~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~   53 (117)
T d1feca2          16 EAPKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRG   53 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESS
T ss_pred             ccCCeEEEECCChHHHHHHHHhHhhccccc-ccceeccc
Confidence            3458999999999998877765544   66 56666554

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=80.03  E-value=1  Score=34.05  Aligned_cols=32  Identities=13%  Similarity=0.241  Sum_probs=26.8

Q ss_pred             eEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCh
Q 022879          110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  142 (290)
Q Consensus       110 ~vlI~Gag~vG~~ai~la~~~g~~~vv~v~~~~  142 (290)
                      -|+|.|+|.+|++++..+...|. +|++++..+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38899999999998888888898 588887654