Citrus Sinensis ID: 022900

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNGAL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHcccccEEEEccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHccccEEEEEccccccEEEEHHHEHHcccccccccccccccEEEcccHHHHHHHHHHHHHcccEEEEEccccHccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
mgseliyrghdsqlatdsyspkpikpwfavtQPIRYMLREQRLVFVLVGIAIATLFFTviptsypasyggarghvaisdslsyypvetyqraynprvgfgavnsggkiplglkrkglrivvtggagfvgsHLVDRLIARGDSVIVVDNFFTGRKEnvmhhfgnpnfelirhdvveplllEVDQiyhlacpaspvhykfnpvktikTNVVGTLNMLGLAKRVGARFLLTstsevygdplqhpqketywgnvnpigtyFFSFSLIFLVFISQFRPSRKACRFFILLYRNGAL
Flexible Loop (DISEMBL)
mgseliyrghdsqlatdsyspkpikPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEvygdplqhpqkETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNGAL
Low Complexity Region (SEG)
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYffsfsliflvfisqfRPSRKACRFFILLYRNGAL
Disordered region (IsUnstruct)
**********************PIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR****
Disordered Region (DISOPRED)
*****IY***********************TQPIRYMLREQRLVFVLVGIAIATLFFTVI******************************************************KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNG**
Disordered Region (DISEMBL)
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNGAL
Disordered Region (DISPRO)
*****************SYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPT*****************************************SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNGAL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNGAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
Q6GMI9	418	UDP-glucuronic acid decar	yes	no	0.472	0.327	0.744	2e-56
Q8NBZ7	420	UDP-glucuronic acid decar	yes	no	0.472	0.326	0.744	2e-56
Q6DF08	421	UDP-glucuronic acid decar	yes	no	0.472	0.325	0.744	2e-56
Q91XL3	420	UDP-glucuronic acid decar	yes	no	0.472	0.326	0.744	2e-56
Q5R885	420	UDP-glucuronic acid decar	yes	no	0.472	0.326	0.744	2e-56
Q5PQX0	420	UDP-glucuronic acid decar	yes	no	0.472	0.326	0.744	3e-56
A0R5C5	313	UDP-glucose 4-epimerase O	yes	no	0.475	0.440	0.364	1e-14
Q6MWV3	314	UDP-glucose 4-epimerase O	yes	no	0.444	0.410	0.350	1e-14
Q57664	305	Putative UDP-glucose 4-ep	yes	no	0.462	0.439	0.348	5e-14
O84903	331	UDP-glucose 4-epimerase O	yes	no	0.427	0.374	0.313	7e-11

>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2

 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 88  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 147

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 148 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 207

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 208 EVHPQNEDYWGHVNPIG 224

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development.
Danio rerio (taxid: 7955)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 5

>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 210 EVHPQSEDYWGHVNPIG 226

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 91  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 150

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 151 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 210

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 211 EVHPQSEEYWGHVNPIG 227

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Xenopus tropicalis (taxid: 8364)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 210 EVHPQSEDYWGHVNPIG 226

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 210 EVHPQSEDYWGHVNPIG 226

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1

 Score =  218 bits (556), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 210 EVHPQSEDYWGHVNPIG 226

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 10/148 (6%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +R +VTG AGF+GS LVDRL+A G  V+ +D+  +GR EN+     +  FE ++ D+V+ 
Sbjct: 1   MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENSDKFEFVKADIVDA 60

Query: 177 ----LLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
               LL E   + I+HLA   S      +P      NVVGT+ +   A+  G R ++ ++
Sbjct: 61  DLTGLLAEFKPEVIFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRKVVHTS 120

Query: 231 S--EVYGDPLQHPQKETYWGNVNPIGTY 256
           S   VYG P  +P  E     VNP   Y
Sbjct: 121 SGGSVYGTPPAYPTSEDM--PVNPASPY 146

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +R +VTG AGF+GS LVDRL+A G SV+ +DNF TGR  N+ H   N     +  D+V  
Sbjct: 1   MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTA 60

Query: 177 LLLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
            L  +      + ++HLA          +P      NV+GT+ +   A++ G R ++ ++
Sbjct: 61  DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 120

Query: 231 S--EVYGDPLQHPQKET 245
           S   +YG P ++P  ET
Sbjct: 121 SGGSIYGTPPEYPTPET 137

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 15/149 (10%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTGGAGF+GSH+VD+LI     VI++DN  TG K N+     NP  E +  D+ +  L
Sbjct: 2   ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDL 56

Query: 179 LE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARFLLTST 230
            E      V+ + H A   +  +   NPV     NV+GT+N+L + ++  +      +S 
Sbjct: 57  DEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSG 116

Query: 231 SEVYGDPLQHPQKETYWGNVNPIGTYFFS 259
             VYG+P   P  E +   +NP+  Y  S
Sbjct: 117 GAVYGEPNYLPVDENH--PINPLSPYGLS 143

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1

 Score = 68.2 bits (165), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 13/137 (9%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           + I V GGAG++GSH V +L+A G+ V+V+DN  TG ++ V     +P     + D+ + 
Sbjct: 1   MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAV-----DPRARFYQGDIRDY 55

Query: 177 LLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
             L       ++D I H A  +       +P+K    N  G + +L    + G  + + +
Sbjct: 56  HFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFS 115

Query: 229 STSEVYGDPLQHPQKET 245
           ST+  YG+P Q P KET
Sbjct: 116 STAATYGEPKQVPIKET 132

Lactobacillus casei (taxid: 1582)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
213950353	442	UDP-glucuronic acid decarboxylase 2 [Gos	0.875	0.574	0.823	1e-117
356535177	427	PREDICTED: UDP-glucuronic acid decarboxy	0.851	0.578	0.811	1e-110
449469078	435	PREDICTED: UDP-glucuronic acid decarboxy	0.855	0.570	0.798	1e-109
60932254	443	UDP-glucuronic acid decarboxylase 2 [Pop	0.858	0.562	0.790	1e-107
224131118	442	predicted protein [Populus trichocarpa]	0.855	0.561	0.775	1e-107
255564178	419	dtdp-glucose 4-6-dehydratase, putative [	0.872	0.603	0.796	1e-106
118481067	443	unknown [Populus trichocarpa]	0.858	0.562	0.786	1e-106
15229334	445	UDP-glucuronic acid decarboxylase [Arabi	0.862	0.561	0.761	1e-106
13605583	445	AT3g62830/F26K9_260 [Arabidopsis thalian	0.862	0.561	0.761	1e-106
297817618	445	UDP-glucuronic acid decarboxylase 2 [Ara	0.862	0.561	0.765	1e-105

>gi|213950353|gb|ACJ54441.1| UDP-glucuronic acid decarboxylase 2 [Gossypium hirsutum]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 226/255 (88%), Gaps = 1/255 (0%)

Query: 1   MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVI 60
           MGSELIYRGH++QLA+DSYSPKP+KPW +VT+ +RYMLREQRL+FVLVGIAIATL F V 
Sbjct: 1   MGSELIYRGHETQLASDSYSPKPVKPWASVTRVVRYMLREQRLLFVLVGIAIATLVFNVF 60

Query: 61  PTSYPASYGGARGHVAISDSLSYYPVETYQR-AYNPRVGFGAVNSGGKIPLGLKRKGLRI 119
           P    A          + DS+ Y+P+ET  + +Y  R+GFG+ N  GKIPLGLKRKGLRI
Sbjct: 61  PAPRAAHGPHLHSTTPLLDSIPYFPIETQNKFSYAHRLGFGSGNPTGKIPLGLKRKGLRI 120

Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL 179
           VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL
Sbjct: 121 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL 180

Query: 180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ 239
           EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ
Sbjct: 181 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ 240

Query: 240 HPQKETYWGNVNPIG 254
           HPQKETYWGNVNPIG
Sbjct: 241 HPQKETYWGNVNPIG 255

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535177|ref|XP_003536125.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/254 (81%), Positives = 222/254 (87%), Gaps = 7/254 (2%)

Query: 1   MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVI 60
           MGSELI+RGH++Q   DSYSPKP KPWF VT+PI YMLREQRLVFVLVG+ IATLFFT++
Sbjct: 1   MGSELIFRGHEAQPVDDSYSPKPHKPWFTVTRPIHYMLREQRLVFVLVGVIIATLFFTLV 60

Query: 61  PTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIV 120
           P+S  +S          S  +SY+  E+   AY+ RV   AV+S GK+PLG+KRKGLRIV
Sbjct: 61  PSSSSSSVPYE------SLPISYFERESKIPAYHHRVA-AAVHSVGKVPLGIKRKGLRIV 113

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP FELIRHDVVEPLLLE
Sbjct: 114 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 173

Query: 181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH 240
           VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH
Sbjct: 174 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH 233

Query: 241 PQKETYWGNVNPIG 254
           PQKETYWGNVNPIG
Sbjct: 234 PQKETYWGNVNPIG 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469078|ref|XP_004152248.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus] gi|449484279|ref|XP_004156838.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/258 (79%), Positives = 219/258 (84%), Gaps = 10/258 (3%)

Query: 1   MGSELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           MGSELI+RGHD +Q A D+YSPKP KPW +VT+PIRYMLREQRLVFVLVGIAIAT  FT+
Sbjct: 1   MGSELIFRGHDETQPAADAYSPKPPKPWLSVTRPIRYMLREQRLVFVLVGIAIATFVFTL 60

Query: 60  IPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGA---VNSGGKIPLGLKRKG 116
            P+S   S     G+  I   L+ +   +   +Y  R GF     +NSGGKIPLGLKRKG
Sbjct: 61  FPSSNSPS---RVGYDPIPTELARW---SNTPSYEHRAGFQVHRVMNSGGKIPLGLKRKG 114

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRKENVMHHFGNP FELIRHDVVEP
Sbjct: 115 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEP 174

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 175 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 234

Query: 237 PLQHPQKETYWGNVNPIG 254
           PLQHPQ ETYWGNVNPIG
Sbjct: 235 PLQHPQVETYWGNVNPIG 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60932254|gb|AAX37335.1| UDP-glucuronic acid decarboxylase 2 [Populus tomentosa]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/258 (79%), Positives = 221/258 (85%), Gaps = 9/258 (3%)

Query: 3   SELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIP 61
           SELI+RGHD +Q A+D+YSPKP KPW AVT+PIRY+L EQRLVF+LVGIAIATLFFT++P
Sbjct: 4   SELIFRGHDETQPASDAYSPKPPKPWLAVTRPIRYLLLEQRLVFILVGIAIATLFFTLLP 63

Query: 62  TSYPASYGGARGHVAISDSLSYYPVETYQ----RAYNP-RVGFGAVNSGGKIPLGLKRKG 116
           +S  +S      H  I ++ S++  E       + Y P RVGF + NSGGKIPLGLK K 
Sbjct: 64  SSSSSS---PYEHDPIPNTFSHFSHELTAPMRYKYYEPLRVGFQSANSGGKIPLGLKSKS 120

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF NP FELIRHDVVEP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFKNPRFELIRHDVVEP 180

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 181 LLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 240

Query: 237 PLQHPQKETYWGNVNPIG 254
           PLQHPQ ETYWGNVNPIG
Sbjct: 241 PLQHPQVETYWGNVNPIG 258

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131118|ref|XP_002321005.1| predicted protein [Populus trichocarpa] gi|118484863|gb|ABK94298.1| unknown [Populus trichocarpa] gi|222861778|gb|EEE99320.1| predicted protein [Populus trichocarpa]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/258 (77%), Positives = 218/258 (84%), Gaps = 10/258 (3%)

Query: 3   SELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIP 61
           SELI+RGHD +Q   D+YSPKP KPW  V +P+RY+LRE+RLVF LVG+AIAT+FFT++P
Sbjct: 4   SELIFRGHDETQPTPDAYSPKPAKPWLFVIRPVRYLLREKRLVFFLVGMAIATVFFTILP 63

Query: 62  TSYPASYGGARGHVAISDSLSYYPVETYQ----RAYNP-RVGFGAVNSGGKIPLGLKRKG 116
           +S P     A  +  + DS S+   E       + Y P +VGF + NSGGKIPLGLKRKG
Sbjct: 64  SSSPH----AHKYDPLPDSFSHISHELTTPVRYKYYEPLQVGFQSANSGGKIPLGLKRKG 119

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF NP FELIRHDVVEP
Sbjct: 120 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFKNPRFELIRHDVVEP 179

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 180 LLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 239

Query: 237 PLQHPQKETYWGNVNPIG 254
           PLQHPQ ETYWGNVNPIG
Sbjct: 240 PLQHPQVETYWGNVNPIG 257

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564178|ref|XP_002523086.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223537648|gb|EEF39271.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/260 (79%), Positives = 220/260 (84%), Gaps = 7/260 (2%)

Query: 1   MGSELIYRGHDSQ--LATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFT 58
           M SELI+RGHD +     D YSPKP K W +VT+PIRY+LREQRLVFVLVGIAIATLFFT
Sbjct: 1   MASELIFRGHDDEGHHMADEYSPKPPKRWLSVTRPIRYVLREQRLVFVLVGIAIATLFFT 60

Query: 59  VIPTSYPA---SYGGARGHVAISDSLSYYP-VETYQRAYNPRVGFGAVNSGGKIPLGLKR 114
           VIP+S P    +Y     +  IS+ LS++  V    R Y P V  G++NSGGKIPLGLKR
Sbjct: 61  VIPSSSPPPRSTYINYDKYDPISNPLSHFDSVPARHRYYEPLVT-GSMNSGGKIPLGLKR 119

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLRIVVTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRKENVMHHF NP FELIRHDVV
Sbjct: 120 KGLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFKNPRFELIRHDVV 179

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EPLLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 180 EPLLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 239

Query: 235 GDPLQHPQKETYWGNVNPIG 254
           GDPLQHPQ ETYWGNVNPIG
Sbjct: 240 GDPLQHPQVETYWGNVNPIG 259

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481067|gb|ABK92487.1| unknown [Populus trichocarpa]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/258 (78%), Positives = 219/258 (84%), Gaps = 9/258 (3%)

Query: 3   SELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIP 61
           SELI+RGHD +Q A+D+YSPKP KPW AVT+PIRY+L EQRLVF+LVGIAIATLFFTV+P
Sbjct: 4   SELIFRGHDETQPASDAYSPKPPKPWLAVTRPIRYLLLEQRLVFILVGIAIATLFFTVLP 63

Query: 62  TSYPASYGGARGHVAISDSLSYYPVETYQ----RAYNP-RVGFGAVNSGGKIPLGLKRKG 116
           +S  +S      H  I ++ S++  E       + Y P RVG  + NSGGKIPLGLK K 
Sbjct: 64  SSSSSS---PYEHDPIPNTFSHFSHELTTPMRYKYYEPLRVGLQSANSGGKIPLGLKSKS 120

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH  NP FELIRHDVVEP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHLKNPRFELIRHDVVEP 180

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 181 LLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 240

Query: 237 PLQHPQKETYWGNVNPIG 254
           PLQHPQ ETYWGNVNPIG
Sbjct: 241 PLQHPQVETYWGNVNPIG 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229334|ref|NP_191842.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|186511349|ref|NP_001118893.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|7362763|emb|CAB83133.1| dTDP-glucose 4-6-dehydratase homolog D18 [Arabidopsis thaliana] gi|23505953|gb|AAN28836.1| At3g62830/F26K9_260 [Arabidopsis thaliana] gi|332646877|gb|AEE80398.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|332646878|gb|AEE80399.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana]

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/260 (76%), Positives = 214/260 (82%), Gaps = 10/260 (3%)

Query: 1   MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M SELI R H++ Q   D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 60  IPTSYPAS-YGGARGHVAISDSLSYYPVETYQR----AYNPRVGFGAVNSGGKIPLGLKR 114
            P S  ++ Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIG----ATGGKIPLGLKR 116

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query: 235 GDPLQHPQKETYWGNVNPIG 254
           GDPLQHPQ ETYWGNVNPIG
Sbjct: 237 GDPLQHPQVETYWGNVNPIG 256

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13605583|gb|AAK32785.1|AF361617_1 AT3g62830/F26K9_260 [Arabidopsis thaliana] gi|14595664|gb|AAK70881.1|AF387788_1 UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|928932|emb|CAA89205.1| homolog of dTDP-glucose 4-6-dehydratases [Arabidopsis thaliana] gi|1585435|prf||2124427B diamide resistance gene

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/260 (76%), Positives = 214/260 (82%), Gaps = 10/260 (3%)

Query: 1   MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M SELI R H++ Q   D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 60  IPTSYPAS-YGGARGHVAISDSLSYYPVETYQR----AYNPRVGFGAVNSGGKIPLGLKR 114
            P S  ++ Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIG----ATGGKIPLGLKR 116

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query: 235 GDPLQHPQKETYWGNVNPIG 254
           GDPLQHPQ ETYWGNVNPIG
Sbjct: 237 GDPLQHPQVETYWGNVNPIG 256

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817618|ref|XP_002876692.1| UDP-glucuronic acid decarboxylase 2 [Arabidopsis lyrata subsp. lyrata] gi|297322530|gb|EFH52951.1| UDP-glucuronic acid decarboxylase 2 [Arabidopsis lyrata subsp. lyrata]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/260 (76%), Positives = 214/260 (82%), Gaps = 10/260 (3%)

Query: 1   MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M +ELI R H++ Q   D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1   MANELINRRHEADQPIADAYYPKPIKPWFMVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 60  IPTSYPAS-YGGARGHVAISDSLSYYPVETYQR----AYNPRVGFGAVNSGGKIPLGLKR 114
            P S  +S Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct: 61  FPRSTQSSAYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIG----ATGGKIPLGLKR 116

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFELIRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFELIRHDVV 176

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query: 235 GDPLQHPQKETYWGNVNPIG 254
           GDPLQHPQ ETYWGNVNPIG
Sbjct: 237 GDPLQHPQVETYWGNVNPIG 256

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2081675	445	AUD1 "AT3G62830" [Arabidopsis	0.862	0.561	0.761	7.1e-100
TAIR|locus:2053275	343	UXS6 "UDP-XYL synthase 6" [Ara	0.486	0.411	0.746	1.1e-55
TAIR|locus:2078206	341	UXS5 "UDP-XYL synthase 5" [Ara	0.486	0.413	0.739	1.4e-55
TAIR|locus:2168539	357	UXS3 "UDP-glucuronic acid deca	0.475	0.386	0.748	2.9e-55
UNIPROTKB|E1BV28	421	UXS1 "Uncharacterized protein"	0.472	0.325	0.744	3.8e-53
UNIPROTKB|E1BMI4	420	UXS1 "Uncharacterized protein"	0.472	0.326	0.751	3.8e-53
UNIPROTKB|F1PU61	414	UXS1 "Uncharacterized protein"	0.472	0.330	0.744	3.8e-53
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.472	0.377	0.744	3.8e-53
UNIPROTKB|C9JW33	190	UXS1 "UDP-glucuronic acid deca	0.472	0.721	0.744	3.8e-53
UNIPROTKB|Q8NBZ7	420	UXS1 "UDP-glucuronic acid deca	0.472	0.326	0.744	3.8e-53

TAIR|locus:2081675 AUD1 "AT3G62830" [Arabidopsis thaliana (taxid:3702)]

 Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
 Identities = 198/260 (76%), Positives = 214/260 (82%)

Query:     1 MGSELIYRGHDSQLAT-DSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
             M SELI R H++   T D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct:     1 MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query:    60 IPTSYPAS-YGGARGHVAISDSLSYYPVETYQRA----YNPRVGFGAVNSGGKIPLGLKR 114
              P S  ++ Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct:    61 FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIGA----TGGKIPLGLKR 116

Query:   115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
             KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct:   117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query:   175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
             EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct:   177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query:   235 GDPLQHPQKETYWGNVNPIG 254
             GDPLQHPQ ETYWGNVNPIG
Sbjct:   237 GDPLQHPQVETYWGNVNPIG 256

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0042732 "D-xylose metabolic process" evidence=IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2053275 UXS6 "UDP-XYL synthase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 106/142 (74%), Positives = 122/142 (85%)

Query:   114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
             +  +RI+VTGGAGF+GSHLVD+L+    + VIV DN+FTG K+N+    G+P FELIRHD
Sbjct:    28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87

Query:   173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
             V EPL +EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct:    88 VTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 147

Query:   233 VYGDPLQHPQKETYWGNVNPIG 254
             VYGDPL HPQ E+YWGNVNPIG
Sbjct:   148 VYGDPLVHPQTESYWGNVNPIG 169

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2078206 UXS5 "UDP-XYL synthase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 105/142 (73%), Positives = 123/142 (86%)

Query:   114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
             +  +RI+++GGAGF+GSHLVD+L+    + VIV DN+FTG K+N+    G+P FELIRHD
Sbjct:    26 QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85

Query:   173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
             V EPLL+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct:    86 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 145

Query:   233 VYGDPLQHPQKETYWGNVNPIG 254
             VYGDPL HPQ E+YWGNVNPIG
Sbjct:   146 VYGDPLIHPQPESYWGNVNPIG 167

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA;TAS

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2168539 UXS3 "UDP-glucuronic acid decarboxylase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 104/139 (74%), Positives = 122/139 (87%)

Query:   117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
             +RI+++GGAGF+GSHLVD+L+    + V+V DN+FTG KEN+    G+P FELIRHDV E
Sbjct:    45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTE 104

Query:   176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
             PLL+EVD+IYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYG
Sbjct:   105 PLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 164

Query:   236 DPLQHPQKETYWGNVNPIG 254
             DPL HPQ E+YWGNVNPIG
Sbjct:   165 DPLIHPQPESYWGNVNPIG 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0042732 "D-xylose metabolic process" evidence=RCA;IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

UNIPROTKB|E1BV28 UXS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 150

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   151 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 210

Query:   238 LQHPQKETYWGNVNPIG 254
               HPQ E YWG+VNPIG
Sbjct:   211 EVHPQNEDYWGHVNPIG 227

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BMI4 UXS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 103/137 (75%), Positives = 114/137 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI+VTGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    90 RILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query:   238 LQHPQKETYWGNVNPIG 254
               HPQ E YWG+VNPIG
Sbjct:   210 EVHPQTEDYWGHVNPIG 226

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1PU61 UXS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    84 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 143

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   144 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 203

Query:   238 LQHPQKETYWGNVNPIG 254
               HPQ E YWG+VNPIG
Sbjct:   204 EVHPQSEDYWGHVNPIG 220

GO:0005739 "mitochondrion" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:    93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152

Query:   238 LQHPQKETYWGNVNPIG 254
               HPQ E YWG+VNPIG
Sbjct:   153 EVHPQSEDYWGHVNPIG 169

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|C9JW33 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:    93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152

Query:   238 LQHPQKETYWGNVNPIG 254
               HPQ E YWG+VNPIG
Sbjct:   153 EVHPQSEDYWGHVNPIG 169

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/137 (74%), Positives = 114/137 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query:   238 LQHPQKETYWGNVNPIG 254
               HPQ E YWG+VNPIG
Sbjct:   210 EVHPQSEDYWGHVNPIG 226

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033320 "UDP-D-xylose biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6GMI9	UXS1_DANRE	4, ., 1, ., 1, ., 3, 5	0.7445	0.4724	0.3277	yes	no
Q5R885	UXS1_PONAB	4, ., 1, ., 1, ., 3, 5	0.7445	0.4724	0.3261	yes	no
Q8NBZ7	UXS1_HUMAN	4, ., 1, ., 1, ., 3, 5	0.7445	0.4724	0.3261	yes	no
Q5PQX0	UXS1_RAT	4, ., 1, ., 1, ., 3, 5	0.7445	0.4724	0.3261	yes	no
Q91XL3	UXS1_MOUSE	4, ., 1, ., 1, ., 3, 5	0.7445	0.4724	0.3261	yes	no
Q6DF08	UXS1_XENTR	4, ., 1, ., 1, ., 3, 5	0.7445	0.4724	0.3254	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	1e-159
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	1e-118
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	7e-95
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-35
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	9e-33
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-29
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-26
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	4e-25
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	1e-21
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-21
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	2e-20
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	6e-20
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	4e-18
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	7e-18
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-17
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	2e-17
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	3e-17
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-16
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	3e-16
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	5e-16
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	3e-15
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-14
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	3e-14
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	3e-13
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	7e-13
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	5e-12
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	1e-11
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	1e-10
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	2e-10
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	3e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	4e-10
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	1e-09
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-09
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	2e-09
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	4e-09
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-09
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	8e-09
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	1e-08
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-08
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	3e-08
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	3e-08
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-08
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	5e-08
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	5e-08
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	6e-08
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	1e-07
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	2e-07
PLN02427	386	PLN02427, PLN02427, UDP-apiose/xylose synthase	2e-07
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-07
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	2e-07
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	6e-07
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	7e-07
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	8e-07
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	3e-06
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	4e-06
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	4e-06
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	6e-06
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	2e-05
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-05
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	3e-05
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	5e-05
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	7e-05
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	7e-05
PRK11908	347	PRK11908, PRK11908, NAD-dependent epimerase/dehydr	1e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-04
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	1e-04
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	1e-04
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-04
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-04
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	3e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-04
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	4e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-04
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	5e-04
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	6e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	7e-04
PRK08125	660	PRK08125, PRK08125, bifunctional UDP-glucuronic ac	0.002
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	0.002
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	0.002

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score =  449 bits (1156), Expect = e-159
 Identities = 203/258 (78%), Positives = 214/258 (82%), Gaps = 5/258 (1%)

Query: 1   MGSELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M SELI R H+ +Q   D+Y PKPIKPWF VT+PIRYMLREQRLVFVLVGIAIATL FT+
Sbjct: 1   MASELINRRHEETQPTADAYYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTI 60

Query: 60  IPTS---YPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKG 116
            P+S    P S     G+    D  SY P    QR  +        NSGGKIPLGLKRKG
Sbjct: 61  FPSSSQPSPYSVDPLSGYGIRPDE-SYVPAIQAQRKPSLEYLNRIGNSGGKIPLGLKRKG 119

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LR+VVTGGAGFVGSHLVDRL+ARGDSVIVVDNFFTGRKENVMHHF NPNFELIRHDVVEP
Sbjct: 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP 179

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           +LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 180 ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 239

Query: 237 PLQHPQKETYWGNVNPIG 254
           PLQHPQ ETYWGNVNPIG
Sbjct: 240 PLQHPQVETYWGNVNPIG 257

Length = 442

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score =  346 bits (888), Expect = e-118
 Identities = 157/239 (65%), Positives = 188/239 (78%), Gaps = 3/239 (1%)

Query: 16  TDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHV 75
           +  YSPK +K   ++ + I Y+ +EQRL+F+LVGI I + FF + P+   +  G A    
Sbjct: 23  SSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPSL--SRLGPAESTS 80

Query: 76  AISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDR 135
            I+ S+S    ++   +       G   +G ++P+G+ RK LRIVVTGGAGFVGSHLVD+
Sbjct: 81  LITRSVSIAVTDSPPSSSTFNSSGGGGRTG-RVPVGIGRKRLRIVVTGGAGFVGSHLVDK 139

Query: 136 LIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH 195
           LI RGD VIV+DNFFTGRKEN++H FGNP FELIRHDVVEP+LLEVDQIYHLACPASPVH
Sbjct: 140 LIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVH 199

Query: 196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG 254
           YK+NPVKTIKTNV+GTLNMLGLAKRVGARFLLTSTSEVYGDPL+HPQKETYWGNVNPIG
Sbjct: 200 YKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIG 258

Length = 436

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score =  281 bits (722), Expect = 7e-95
 Identities = 107/137 (78%), Positives = 119/137 (86%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGF+GSHL DRL+  G  VI VDNFFTGRK N+ H  G+PNFE IRHDV EPL
Sbjct: 2   RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTEPL 61

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            LEVDQIYHLACPASPVHY++NP+KT+KTNV+GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 62  YLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARVLLASTSEVYGDP 121

Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E+YWGNVNPIG
Sbjct: 122 EVHPQPESYWGNVNPIG 138

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  129 bits (326), Expect = 1e-35
 Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 10/148 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           R++VTGGAGF+GSHLV+RL+ RG  VIV+DN  TG+KEN+      PN + I  D+    
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEV--KPNVKFIEGDIRDDE 58

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            VE     VD ++H A  AS      +P+K  + NV+GTLN+L  A++ G  RF+  S+S
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYASSS 118

Query: 232 EVYGDPLQHPQKETYWGNVNPIGTYFFS 259
            VYGDP   P+ E +    NP+  Y  S
Sbjct: 119 SVYGDPPYLPKDEDH--PPNPLSPYAVS 144

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  122 bits (307), Expect = 9e-33
 Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 9/136 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI+VTGGAGF+GSHLVDRL+  G+ V+VVDN  +GR+EN+   F N  F  ++ D+++  
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTA 60

Query: 178 ----LLEVDQIYHLACPASP-VHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
                 + D ++HLA  A+P V     +P   ++ NV+ T N+L   +  G  R +  S+
Sbjct: 61  DKVAKKDGDTVFHLA--ANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASS 118

Query: 231 SEVYGDPLQHPQKETY 246
           S VYG+    P  E Y
Sbjct: 119 STVYGEAKVIPTPEDY 134

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  113 bits (285), Expect = 1e-29
 Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 6/143 (4%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI+VTGGAGF+GSHLV+RL+A G  V  +D    G    +         +L   D+V+ L
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDEL 60

Query: 178 LLEV-DQIYHLACPASPVHYK-FNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTST-SEV 233
              V D + HLA  +S       +P + +  NV GTLN+L  A+  G  RF+  S+ S V
Sbjct: 61  AKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVV 120

Query: 234 YGDPLQHPQKETYWGNVNPIGTY 256
           YGDP   P  E   G   P+  Y
Sbjct: 121 YGDPPPLPIDEDL-GPPRPLNPY 142

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  101 bits (254), Expect = 4e-26
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 33/132 (25%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTGGAGF+GSHLV RL+ RG  V+V+D                               
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRL----------------------------- 31

Query: 179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDP 237
              D + HLA          NP +  +TNVVGTLN+L  A++ G  RF+  S++ VYG P
Sbjct: 32  ---DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSP 88

Query: 238 LQHPQKETYWGN 249
              P++E     
Sbjct: 89  EGLPEEEETPPR 100

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  101 bits (254), Expect = 4e-25
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            ++VTG  GF+GSHL +RL+  G  V  +D + +     ++ +  +  F  I  DV +  
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTS 231
            +E      D ++HLA   +  +    P+  ++TNV GTLN+L  A  +   R + TSTS
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTSTS 120

Query: 232 EVYGD 236
           EVYG 
Sbjct: 121 EVYGT 125

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           +I+VTGGAGF+GS+ V  L+ +     +I +D   + G  EN+     +P +  ++ D+ 
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDIC 61

Query: 175 EPLLL-------EVDQIYHLACPA-SPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-R 224
           +  L+       ++D + H A  A S V    + P   I+TNV+GT  +L  A++ G  R
Sbjct: 62  DAELVDRLFEEEKIDAVIHFA--AESHVDRSISDPEPFIRTNVLGTYTLLEAARKYGVKR 119

Query: 225 FLLTSTSEVYGD 236
           F+  ST EVYGD
Sbjct: 120 FVHISTDEVYGD 131

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 89.3 bits (222), Expect = 3e-21
 Identities = 53/147 (36%), Positives = 68/147 (46%), Gaps = 18/147 (12%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTGG GF+GSHLV RL+  G  VI        R+                 D+ +P  
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI---VLGRRRRSES---LNTGRIRFHEGDLTDPDA 54

Query: 179 LE-------VDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
           LE        D + HLA   S V   F  P   I+ NV+GTL +L  A+R G  RF+  S
Sbjct: 55  LERLLAEVQPDAVIHLAA-QSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFAS 113

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGTY 256
           +SEVYGD    P  E     + P+  Y
Sbjct: 114 SSEVYGDVADPPITEDT--PLGPLSPY 138

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 88.8 bits (221), Expect = 2e-20
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVD----NFFTGRKENVMHHFGNPNFELIRHDV 173
           R ++TG  G  GS+L + L+ +G  V  +     +F T R +++  +       L   D+
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYIN--KDRITLHYGDL 58

Query: 174 VEPL-LLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK--RVGAR 224
            +   L         D+IYHLA  +       +P  T + N VGTLN+L   +   + AR
Sbjct: 59  TDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 225 FLLTSTSEVYGDPLQHPQKET 245
           F   S+SE YG   + PQ ET
Sbjct: 119 FYQASSSEEYGKVQELPQSET 139

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 87.7 bits (218), Expect = 6e-20
 Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 18/142 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHHFGNPNFELIRHDV 173
           R+++TGGAGF+GS+L    + +G  VI  DN       G    +  +  +     +  D+
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGDI 61

Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKF--NPVKTIKTNVVGTLNMLGLAKRVG--AR 224
                +E L  ++D I H A  A P       +P    +TN +GTLN+L  A++    A 
Sbjct: 62  RNRNDLEDLFEDIDLIIHTA--AQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNAP 119

Query: 225 FLLTSTSEVYGDPLQHPQKETY 246
           F+ TST++VYGD    P     
Sbjct: 120 FIFTSTNKVYGD---LPNYLPL 138

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 82.7 bits (205), Expect = 4e-18
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           +I+VTGGAGF+GS+ V  ++ +   D V+ +D   + G  EN+     +P +  ++ D+ 
Sbjct: 2   KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDIC 61

Query: 175 EPLLLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKR--VGAR 224
           +  L++        D + H A   S V      P   I+TNVVGT  +L  A++     R
Sbjct: 62  DRELVDRLFKEYQPDAVVHFAA-ESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120

Query: 225 FLLTSTSEVYGD 236
           F   ST EVYGD
Sbjct: 121 FHHISTDEVYGD 132

Length = 340

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 81.2 bits (201), Expect = 7e-18
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 15/136 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF------TGRKENVMHHFGNPNFELIRH 171
           R+++ GG GF+GSHLVD L+  G  V V D          G  + +   + N        
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGGVDYIKGDYENR------A 54

Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL--AKRVGARFLLTS 229
           D+    L+ +D + HLA   +P     NP+  I+TNV  T+ +L    A  +G     +S
Sbjct: 55  DLES-ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASS 113

Query: 230 TSEVYGDPLQHPQKET 245
              VYG P Q P  E+
Sbjct: 114 GGTVYGVPEQLPISES 129

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 81.0 bits (200), Expect = 1e-17
 Identities = 49/134 (36%), Positives = 79/134 (58%), Gaps = 15/134 (11%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +++++TGGAG +GSHL++ L+ RG  V+V+DNF TGR+E++  H   PN  ++   + + 
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDH---PNLTVVEGSIADK 57

Query: 177 LLLEVDQIYHLACPASPVH----YKFNP---VKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
            L  VD+++    P + VH    YK +P    +   TNVVG  N++  AK+ G  R +  
Sbjct: 58  AL--VDKLFGDFKPDAVVHTAAAYK-DPDDWYEDTLTNVVGGANVVQAAKKAGVKRLIYF 114

Query: 229 STSEVYG-DPLQHP 241
            T+  YG  P+Q P
Sbjct: 115 QTALCYGLKPMQQP 128

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 80.2 bits (198), Expect = 2e-17
 Identities = 41/135 (30%), Positives = 55/135 (40%), Gaps = 13/135 (9%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH----HFGNPNFELIRHD 172
            R +VTG  GF+GSHL +RL A G  V   D                H  +    L   +
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDEFHLVD----LREME 56

Query: 173 VVEPLLLEVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
                   VD ++HLA     + Y + N    +  N +   NML  A+  G  RFL  S+
Sbjct: 57  NCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASS 116

Query: 231 SEVYGDPLQHPQKET 245
           + VY  P    Q ET
Sbjct: 117 ACVY--PEFK-QLET 128

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 80.1 bits (198), Expect = 3e-17
 Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I+VTGGAG++GSH V +L+  G  V+++DN   G +E +           +  D+ +  
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDRE 60

Query: 178 LL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
           LL       ++D + H A   +       P+K  + NVVGTLN+L   ++ G  +F+ +S
Sbjct: 61  LLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSS 120

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGTY 256
           ++ VYG+P   P  E     + PI  Y
Sbjct: 121 SAAVYGEPSSIPISEDS--PLGPINPY 145

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 20/150 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +++VTGGAG++GSH V +L+  G  V+V+DN   G K  ++        +    D+++  
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQF----KFYEGDLLDRA 57

Query: 178 LLE-------VDQIYHLACPAS---PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
           LL        +D + H A   S    V    NP+K    NVVGTLN++    + G + F+
Sbjct: 58  LLTAVFEENKIDAVVHFAASISVGESVQ---NPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114

Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
            +ST+ VYG+P   P  ET    + PI  Y
Sbjct: 115 FSSTAAVYGEPTTSPISETS--PLAPINPY 142

Length = 329

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 25/148 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF----TGRKENVMHHFGNPN-FELIRHD 172
           +I+VTG AGF+G H+  RL+ RGD V+ +DN         KE  +   G    F+ ++ D
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKGD 61

Query: 173 VVEPLLL-------EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR 224
           + +   L       E D + HLA  A  V Y   NP   + +N+VG LN+L L +  G +
Sbjct: 62  LEDREALRRLFKDHEFDAVIHLAAQAG-VRYSLENPHAYVDSNIVGFLNLLELCRHFGVK 120

Query: 225 -FLLTSTSEVYG----------DPLQHP 241
             +  S+S VYG          D + HP
Sbjct: 121 HLVYASSSSVYGLNTKMPFSEDDRVDHP 148

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 76.4 bits (189), Expect = 5e-16
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 17/150 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +++VTGGAG++GSH V  L+  G  V+V+DN   G +E +         E    D+ +  
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREAL-PRIEKIRIEFYEGDIRDRA 59

Query: 178 LLE-------VDQIYHLACPAS---PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 226
            L+       +D + H A   +    V     P+K    NVVGTLN+L   +  G   F+
Sbjct: 60  ALDKVFAEHKIDAVIHFAALKAVGESVQ---KPLKYYDNNVVGTLNLLEAMRAHGVKNFV 116

Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
            +S++ VYG+P   P  E     +NP   Y
Sbjct: 117 FSSSAAVYGEPETVPITEEA--PLNPTNPY 144

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 73.9 bits (182), Expect = 3e-15
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 23/133 (17%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG---------NPNFELI 169
           ++VTG  GF+GSHLV+ L+ +G  V     +      N  + +G             E++
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLY------NSFNSWGWLDTSPPEVKDKIEVV 54

Query: 170 RHDVVEPLLLE-----VDQIYHLAC-PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG- 222
             D+ +P  +       D ++HLA   A P  Y   P   + TNV GTLN+L  A+ +G 
Sbjct: 55  TGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYI-APDSYVDTNVTGTLNVLQAARDLGV 113

Query: 223 ARFLLTSTSEVYG 235
            + + TSTSEVYG
Sbjct: 114 EKVVHTSTSEVYG 126

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 15/126 (11%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTG  GF+GS+LV  L+A+G  V  +V      R  +          E++  D+ +  
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALV------RSGSDAVLLDGLPVEVVEGDLTDAA 54

Query: 178 LL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            L       D+++HLA   S    K    +  +TNV GT N+L  A   G  R + TS+ 
Sbjct: 55  SLAAAMKGCDRVFHLAAFTSL-WAKDRK-ELYRTNVEGTRNVLDAALEAGVRRVVHTSSI 112

Query: 232 EVYGDP 237
              G P
Sbjct: 113 AALGGP 118

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDS-VIVVDNF-FTGRKENVMHHFGNPNFELIRHDV 173
           RI+VTGGAGF+GS+ V R I     D+ VIV+D   + G  EN+     NP +  ++ D+
Sbjct: 1   RILVTGGAGFIGSNFV-RYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDI 59

Query: 174 -----VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGAR 224
                V  L  E   D + H A  +        P   I+TNVVGT  +L   ++     R
Sbjct: 60  GDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFR 119

Query: 225 FLLTSTSEVYGD 236
           F   ST EVYGD
Sbjct: 120 FHHISTDEVYGD 131

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 17/144 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IVVDN--FFTGRKE-NVMHHFGNPNFELIRHD 172
             ++TG  G  GS+L + L+ +G  V  I   +  F T R       H  +P   L   D
Sbjct: 4   VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGD 63

Query: 173 VVEP-----LLLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG-- 222
           + +      +L EV  D+IY+LA   S V   F  P  T   + +GTL +L   + +G  
Sbjct: 64  LTDSSNLLRILEEVQPDEIYNLAAQ-SHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEK 122

Query: 223 -ARFLLTSTSEVYGDPLQHPQKET 245
             RF   STSE+YG   + PQKET
Sbjct: 123 KTRFYQASTSELYGLVQEIPQKET 146

Length = 345

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 67.3 bits (165), Expect = 7e-13
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 15/150 (10%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRK------ENVMHHFGNPNF-ELIR 170
           I+VTGGAGF+GS+LV  L  RG   ++VVDN   G K        +  +    +F + +R
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWVR 61

Query: 171 HDVVEPLLLEVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
                    +++ I+H  AC  +      +    +  N   T  +L        RF+  S
Sbjct: 62  KGDENF---KIEAIFHQGACSDTTET---DGKYMMDNNYQYTKELLHYCLEKKIRFIYAS 115

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGTYFFS 259
           ++ VYG+      ++    N+ P+  Y +S
Sbjct: 116 SAAVYGNGSLGFAEDIETPNLRPLNVYGYS 145

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 64.6 bits (158), Expect = 5e-12
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 30/160 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR----KENVMH----HFGNPNFELI 169
            ++VTG  GF+ SH+V++L+  G  V       T R       +         N   E +
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVR-----GTVRSLSKSAKLKALLKAAGYNDRLEFV 55

Query: 170 RHDVV------EPLLLEVDQIYHLACPASPVHYKFNPVKT--IKTNVVGTLNMLGLAKRV 221
             D +      +  L  VD + H+   ASP  +     +   I   V GTLN+L  AK  
Sbjct: 56  IVDDLTAPNAWDEALKGVDYVIHV---ASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAA 112

Query: 222 GA--RFLLTSTSEVYGDPLQHPQKETY----WGNVNPIGT 255
           G+  R +LTS+    GDP      + +    W ++    +
Sbjct: 113 GSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKS 152

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 32/138 (23%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--------HFGNPNF 166
           KG  I+VTGGAG +GS LV +++  G   ++V      R EN +H         F +   
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILKFGPKKLIV----FDRDENKLHELVRELRSRFPHDKL 56

Query: 167 ELIRHDVVEPLLL-------EVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLN 213
             I  DV +   L         D ++H A        K       NP + IKTNV+GT N
Sbjct: 57  RFIIGDVRDKERLRRAFKERGPDIVFHAAA------LKHVPSMEDNPEEAIKTNVLGTKN 110

Query: 214 MLGLAKRVG-ARFLLTST 230
           ++  A   G  +F+  ST
Sbjct: 111 VIDAAIENGVEKFVCIST 128

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 20/144 (13%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           ++I+VTGGAGF+GS +V  +I    DSV+ VD   + G  E++     +  +     D+ 
Sbjct: 1   MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60

Query: 175 EPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA--------- 218
           +   L+        D + HLA  +        P   I+TN+VGT  +L  A         
Sbjct: 61  DRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDE 120

Query: 219 -KRVGARFLLTSTSEVYGDPLQHP 241
            K+   RF   ST EVYGD L HP
Sbjct: 121 DKKNAFRFHHISTDEVYGD-LPHP 143

Length = 352

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTG------RKENVMHHFGNPNF-ELIR 170
           I+VTGGAGF+GS+LV  L  RG   ++VVDN   G          +  +    +F + + 
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLE 60

Query: 171 HDVVEPLLLEVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
                    +++ I+H  AC  +    + +    ++ N   +  +L      G  F+  S
Sbjct: 61  KGA----FGKIEAIFHQGACSDT---TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYAS 113

Query: 230 TSEVYGD 236
           ++  YGD
Sbjct: 114 SAATYGD 120

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 19/151 (12%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVV 174
           +R++VTGG+G++GSH   +L+  G  V+++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 175 EPLLLEVDQIYHLACPASPVHYK---------FNPVKTIKTNVVGTLNMLGLAKRVGAR- 224
              LL   +I H     + +H+            P++    NV GTL ++   +    + 
Sbjct: 61  NEALL--TEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            + +S++ VYGD  + P  E++     P GT
Sbjct: 119 LIFSSSATVYGDQPKIPYVESF-----PTGT 144

Length = 338

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVD---NFFTGRKENVMHHFGNPNFELIRHDVVE 175
           + VTGG GF+G HLV RL+  G  V+V+    +     +             ++  D+ +
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 176 P-----------LLLEVDQIYHLACPASPVHYKFN--PVKTIKTNVVGTLNMLGLAKRVG 222
           P           L  +VD + H A  AS   Y F        +TN+ GT ++L LA R+ 
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCA--AS---YDFQAPNEDAWRTNIDGTEHVLELAARLD 115

Query: 223 A-RFLLTSTSEVYGDP 237
             RF   ST+ V G+ 
Sbjct: 116 IQRFHYVSTAYVAGNR 131

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 27/147 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +++VTG  GF+G  LVD+L++RG+ V I V N        V+    + +           
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDS-------FTD 53

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTI------KTNVVGTLNMLGLAKRVGA-RFLLTS 229
           L L VD + HL   A+ VH   N           K N   T  +   A R G  RF+  S
Sbjct: 54  LFLGVDAVVHL---AARVH-VMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLS 109

Query: 230 TSEVYG-----DPLQH---PQKETYWG 248
           + +V G      P      P  +  +G
Sbjct: 110 SVKVNGEGTVGAPFDETDPPAPQDAYG 136

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 31/151 (20%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI-------VVDNFF-TGRKENVM-HHFGNPN 165
           +G R++VTG  GF GS L   L   G  VI          N F     +N +    G+  
Sbjct: 3   QGKRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISSTRGD-- 60

Query: 166 FELIR-HDVVEPLLLEV--DQIYHLACPASPV---HYKFNPVKTIKTNVVGTLNMLGLAK 219
              IR  + +   + E   + ++HLA  A P+    YK +PV+T +TNV+GT+N+L   +
Sbjct: 61  ---IRDLNALREAIREYEPEIVFHLA--AQPLVRLSYK-DPVETFETNVMGTVNLLEAIR 114

Query: 220 RVGA--RFLLTSTSEVYGDPLQHPQKETYWG 248
             G+    +  ++ + Y +      KE  WG
Sbjct: 115 ETGSVKAVVNVTSDKCYEN------KEWGWG 139

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 14/131 (10%)

Query: 119 IVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
           I++TG AGF+ SH+ +RLI       ++V+D   +    +N+     +PNF+ ++ D+  
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68

Query: 174 ---VEPLLL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 225
              V  LL+   +D I H A   + V   F N  +  K N+ GT  +L   K  G   RF
Sbjct: 69  ADLVNYLLITEGIDTIMHFAA-QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127

Query: 226 LLTSTSEVYGD 236
           +  ST EVYG+
Sbjct: 128 IHVSTDEVYGE 138

Length = 668

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 32/138 (23%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIR- 170
            G  ++VTGG G +GS L  +++      I++      R E    ++       F  ++ 
Sbjct: 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIIL----FSRDEYKLYLIDMELREKFPELKL 304

Query: 171 ---------HDVVEPLL--LEVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLN 213
                     D VE  +   +VD ++H A        K      +NP + IKTNV+GT N
Sbjct: 305 RFYIGDVRDRDRVERAMEGHKVDIVFHAAA------LKHVPLVEYNPEEAIKTNVLGTEN 358

Query: 214 MLGLAKRVG-ARFLLTST 230
           +   A + G  +F+L ST
Sbjct: 359 VAEAAIKNGVKKFVLIST 376

Length = 588

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 16/140 (11%)

Query: 120 VVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +VTGG GF+G H+V  L+  G+   V V D  F+              +  I  DV    
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITY--IEGDVTDKQ 58

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTS 231
            +   L   D + H A     V  K      +K NV GT N+L    + G R L+ TS+ 
Sbjct: 59  DLRRALQGSDVVIHTAA-IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSM 117

Query: 232 EV-----YGDPLQHPQKETY 246
           EV     YG P+ +  + T 
Sbjct: 118 EVVGPNSYGQPIVNGDETTP 137

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 55.4 bits (133), Expect = 8e-09
 Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 19/138 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
           +I++TGGAGF+GS LV  +I    D+V+VVD   + G   ++     +  F   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62

Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA---------- 218
              L         D + HLA  +        P   I+TN+VGT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122

Query: 219 KRVGARFLLTSTSEVYGD 236
           K+   RF   ST EVYGD
Sbjct: 123 KKSAFRFHHISTDEVYGD 140

Length = 355

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 54.7 bits (131), Expect = 1e-08
 Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 17/189 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV------MHHFGNPNFELIRH 171
           R ++TG AGF+GS L++ L+    +VI +DNF TG + N+      +       F  I+ 
Sbjct: 17  RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG 76

Query: 172 DV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARF 225
           D+      +     VD + H A   S      +P+ T   N+ G LNML  A+    + F
Sbjct: 77  DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF 136

Query: 226 LLTSTSEVYGDPLQHPQKETYWGN-VNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILL 284
              ++S  YGD    P+ E   G  ++P     +   L   VF   +  +    R+F + 
Sbjct: 137 TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF 196

Query: 285 YR----NGA 289
            R    NGA
Sbjct: 197 GRRQNPNGA 205

Length = 348

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMH----HFGNPNFELIRHDVVE 175
           VTG +GF+GS LV RL+ RG +V   V +   G ++ V H           +L + D+++
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRD--PGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 176 PLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT 228
               +      D ++H+A P      +    + I+  V GTLN+L    +  +  R + T
Sbjct: 61  YGSFDAAIDGCDGVFHVASPVDF-DSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 229 -STSEVYGDPLQHPQK---ETYWGNVN 251
            S + V  +P +   K   E+ W +++
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLD 146

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 51/151 (33%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           ++++TG +GFVG  L +RL++                         PN  LI  DVV P 
Sbjct: 2   KVLITGASGFVGQRLAERLLSDV-----------------------PNERLILIDVVSPK 38

Query: 178 -------------------LLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTL 212
                              L+E       D ++HLA   S    + +     + NV GT 
Sbjct: 39  APSGAPRVTQIAGDLAVPALIEALANGRPDVVFHLAAIVSG-GAEADFDLGYRVNVDGTR 97

Query: 213 NMLGLAKRVGA--RFLLTSTSEVYGDPLQHP 241
           N+L   ++ G   RF+ TS+  VYG PL +P
Sbjct: 98  NLLEALRKNGPKPRFVFTSSLAVYGLPLPNP 128

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 32/134 (23%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHH--FGNPNFELIRH-- 171
           ++VTGG G +GS L  +++      I++   F  R E     +        N   +R   
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIIL---F-SRDEFKLYEIRQELRQEYNDPKLRFFI 56

Query: 172 -DVVEPLLLE-------VDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLNMLGL 217
            DV +   LE       VD ++H A        K      +NP++ IKTNV+GT N+   
Sbjct: 57  GDVRDRERLERAMEQHGVDTVFHAAA------LKHVPLVEYNPMEAIKTNVLGTENVAEA 110

Query: 218 AKRVGA-RFLLTST 230
           A   G  +F+L ST
Sbjct: 111 AIENGVEKFVLIST 124

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 15/126 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFEL----IRH- 171
            ++VTGG+GF G  LV +L+ R G  V   D    G     +  + +PN E     I   
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEA---LSAWQHPNIEFLKGDITDR 57

Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTI-KTNVVGTLNMLGLAKRVGA-RFLLTS 229
           + VE  L   D ++H    A+ V     P     + NV GT N+L   +R G  +F+ TS
Sbjct: 58  NDVEQALSGADCVFHT---AAIVP-LAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTS 113

Query: 230 TSEVYG 235
           +S V  
Sbjct: 114 SSSVIF 119

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 33/153 (21%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVV-----DNFFTG--RKENVMHHFGNPNFELIRH-- 171
           +TG  GF+G  L+++L+     V +       +  +   R    +  +G  +        
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 172 -----DVVEPLL-----------LEVDQIYHLACPASPVHYKFN-PVKTIK-TNVVGTLN 213
                D+ EP L            EVD I H A  A+     F  P   ++ TNV+GT  
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNA--AT---VNFVEPYSDLRATNVLGTRE 115

Query: 214 MLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKET 245
           +L LAK++    F   ST+ V G+     +++ 
Sbjct: 116 VLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKP 148

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 29/155 (18%)

Query: 113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPNF 166
              G  I+VTGGAG++GSH V +L+  G  V+V+DN     +E +          G+ N 
Sbjct: 2   SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGD-NL 60

Query: 167 ELIRHDVVEPLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTL 212
              + D+ +   LE        D + H A         A P+ Y  N       N+VGT+
Sbjct: 61  VFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDN-------NLVGTI 113

Query: 213 NMLGLAKRVGARFLLTSTS-EVYGDPLQHPQKETY 246
           N+L +  + G + L+ S+S  VYG P + P  E +
Sbjct: 114 NLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEF 148

Length = 352

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV----- 173
           I++ G  GF+G  L   L+ +G  V ++      R    +         ++  D+     
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLV-----RNTKRLSKEDQEPVAVVEGDLRDLDS 55

Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
           +   +  VD + HL   A       +     + +V GT N+L  AK  G   F+  S+  
Sbjct: 56  LSDAVQGVDVVIHL---AGAPRDTRDF---CEVDVEGTRNVLEAAKEAGVKHFIFISSLG 109

Query: 233 VYGDP 237
            YGD 
Sbjct: 110 AYGDL 114

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-------E 167
           + LRI +TG  GF+ SH+  RL A G  +I  D      K+N   H     F       +
Sbjct: 20  EKLRICITGAGGFIASHIARRLKAEGHYIIASD-----WKKN--EHMSEDMFCHEFHLVD 72

Query: 168 LIRHDVVEPLLLEVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
           L   +    +   VD +++LA     + + + N    +  N + + NML  A+  G  RF
Sbjct: 73  LRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRF 132

Query: 226 LLTSTSEVY 234
              S++ +Y
Sbjct: 133 FYASSACIY 141

Length = 370

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 36/152 (23%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMH--HFGNPNFELIRH--- 171
           +TG  G  GS+L + L+++G  V  I+    NF T R +++    H      +L  H   
Sbjct: 11  ITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKL--HYGD 68

Query: 172 -----------DVVEPLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML---- 215
                      D ++P     D++Y+LA   S V   F  P  T      G L +L    
Sbjct: 69  LSDASSLRRWLDDIKP-----DEVYNLAA-QSHVAVSFEMPDYTADVVATGALRLLEAVR 122

Query: 216 --GLAKRVGARFLLTSTSEVYGDPLQHPQKET 245
             G       ++    +SE+YG     PQ ET
Sbjct: 123 LHGQETGRQIKYYQAGSSEMYGS-TPPPQSET 153

Length = 340

>gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 30/152 (19%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF--------------FTGRKENVMH 159
           K L I + G  GF+GSHL ++L+      V+ +D +              ++GR +    
Sbjct: 13  KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQ---- 68

Query: 160 HFGNPNFELIRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
            F   N   I+HD  +E L+   D   +LA   +P  Y   P+ TI +N +  L ++   
Sbjct: 69  -FHRIN---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC 124

Query: 219 KRVGARFLLTSTSEVYGD------PLQHPQKE 244
                R +  ST EVYG       P  HP ++
Sbjct: 125 SENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQ 156

Length = 386

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 22/125 (17%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRKENVMHHFGN-----PNFELIRHDV 173
           VTG +GFV SH+V++L+ RG  V   V D      K   ++H  +        EL   D+
Sbjct: 3   VTGASGFVASHVVEQLLERGYKVRATVRD----PSKVKKVNHLLDLDAKPGRLELAVADL 58

Query: 174 VEPLLLE-----VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 225
            +    +        ++H+   A+PV +   +P + IK  + GTLN L  A    +  RF
Sbjct: 59  TDEQSFDEVIKGCAGVFHV---ATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRF 115

Query: 226 LLTST 230
           +LTS+
Sbjct: 116 VLTSS 120

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 24/146 (16%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENV---MHHFGNPNFELIRHDV 173
           +TG  G  GS+L + L+ +G  V  +     +F T R E++    H+      +L   D+
Sbjct: 5   ITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDL 64

Query: 174 VEPLLL-------EVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNML------GLAK 219
            +   L       +  +IY+LA   S V   F  P  T   + +GTL +L      GL K
Sbjct: 65  TDSSNLRRIIDEIKPTEIYNLAA-QSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIK 123

Query: 220 RVGARFLLTSTSEVYGDPLQHPQKET 245
            V  +F   STSE+YG   + PQ ET
Sbjct: 124 SV--KFYQASTSELYGKVQEIPQNET 147

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 35/148 (23%), Positives = 52/148 (35%), Gaps = 32/148 (21%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           ++I++TG  G +G+ L   L    + VI  D                   ++   D V  
Sbjct: 1   MKILITGANGQLGTELRRALPGEFE-VIATD---------------RAELDITDPDAVLE 44

Query: 177 LLLEV--DQIYHLA------CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           ++ E   D + + A         S       P      N  G  N+   A  VGAR +  
Sbjct: 45  VIRETRPDVVINAAAYTAVDKAES------EPELAFAVNATGAENLARAAAEVGARLVHI 98

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGTY 256
           ST  V+      P KET     NP+  Y
Sbjct: 99  STDYVFDGEKGGPYKET--DTPNPLNVY 124

Length = 281

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 34/153 (22%), Positives = 50/153 (32%), Gaps = 29/153 (18%)

Query: 118 RIVVTGGAGFVGSHLV------------------------DRLIARGDSVIVVDNFFTGR 153
            +++TG  GF+G++L+                         RL    D     D     R
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 154 KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 213
            E V      P+  L      E L   VD I H    A+ V++ F   +    NV+GT  
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQE-LAENVDLIIH---NAALVNHVFPYSELRGANVLGTAE 117

Query: 214 MLGLAKRVGARFL-LTSTSEVYGDPLQHPQKET 245
           +L LA     + L   S+  V            
Sbjct: 118 VLRLAATGKPKPLHYVSSISVGETEYYSNFTVD 150

Length = 382

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 17/128 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNP-------NFEL 168
           RI++TGG G +GS L   L  R   D+VI  D     RK         P       +F+ 
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIASDI----RKPPAHVVLSGPFEYLDVLDFKS 56

Query: 169 IRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           +   VV     ++  I HLA   S V  K NP      N+ G  N+L LA+    R  + 
Sbjct: 57  LEEIVVN---HKITWIIHLAALLSAVGEK-NPPLAWDVNMNGLHNVLELAREHNLRIFVP 112

Query: 229 STSEVYGD 236
           ST   +G 
Sbjct: 113 STIGAFGP 120

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 34/124 (27%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           ++VTGG+G +G  +   L +RG   V+VV      R++ V+H+    +            
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS-----RRDVVVHNAAILD-----------D 44

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK-----RVGARFLLTSTSE 232
              +D                   + I+ NVVGT  +L  A+     +   RF+L S+  
Sbjct: 45  GRLIDLT------------GSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISSVA 92

Query: 233 VYGD 236
               
Sbjct: 93  GLFG 96

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 23/125 (18%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           ++++VTG  GFVGS +V  L+ +G+ V  +V     T  + N+       + E++  D+ 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP---TSDRRNL----EGLDVEIVEGDLR 53

Query: 175 EPLLLE-----VDQIYHLACPASPVHYKF---NPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
           +P  L         ++H+A       Y+    +P +    NV GT N+L  A   G  R 
Sbjct: 54  DPASLRKAVAGCRALFHVA-----ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERV 108

Query: 226 LLTST 230
           + TS+
Sbjct: 109 VYTSS 113

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI-------VVDNFFT--GRKENVMHHFGNPN 165
           +G +++VTG  GF GS L   L+  G  V           N F      + +  HFG+  
Sbjct: 3   QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR 62

Query: 166 -FELIRHDVVEPLLLEVDQIYHLACPASPV---HYKFNPVKTIKTNVVGTLNMLGLAKRV 221
               +R  + E    + + ++HLA  A P+    Y  +P++T +TNV+GT+N+L   + +
Sbjct: 63  DAAKLRKAIAE---FKPEIVFHLA--AQPLVRKSYA-DPLETFETNVMGTVNLLEAIRAI 116

Query: 222 G 222
           G
Sbjct: 117 G 117

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 46.8 bits (112), Expect = 4e-06
 Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 26/137 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I+VTG  G VGS +V  L  RG   +V    F   KE           +L   + V   
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVV----FRTSKE----------LDLTDQEAVRAF 46

Query: 178 LLEV--DQIYHLACPA---SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR---FLLTS 229
             +   D + HLA  A     V     P   ++ N++   N++  A R G +   FL +S
Sbjct: 47  FEKEKPDYVIHLA--AKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSS 104

Query: 230 TSEVYGDPLQHPQKETY 246
               Y D    P  E+ 
Sbjct: 105 CI--YPDLAPQPIDESD 119

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 29/127 (22%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV--------DNFFTGRKENVMHHFGN------ 163
            +++TG  GF+G++L+  L+ R +   +         +       +N+  +  N      
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 164 -PNFELIRHDVVEPLL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGT 211
               +++  D+ +P L            EVD I H    A+ V++ +   +    NV+GT
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIH--NGAN-VNWVYPYEELKPANVLGT 117

Query: 212 LNMLGLA 218
             +L LA
Sbjct: 118 KELLKLA 124

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 19/141 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TG  G +G  LV +L +    V+V                     +L   + +E L
Sbjct: 1   RILITGANGQLGRELVQQL-SPEGRVVVA--------------LTRSQLDLTDPEALERL 45

Query: 178 LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
           L  +  D + + A        + +P K    N +   N+   A R GAR +  ST  V+ 
Sbjct: 46  LRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFD 105

Query: 236 DPLQHPQKETYWGNVNPIGTY 256
              + P +E      NP+  Y
Sbjct: 106 GEGKRPYRED--DATNPLNVY 124

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV 146
           +I+VTG  GFVG  +V  L+ARG  V   
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAA 30

Length = 275

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 40/124 (32%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTG AG +G  L  RL A    VI VD     R          P  E +R D+ +P  
Sbjct: 1   ILVTGAAGGLGRLLARRL-AASPRVIGVDGLDRRRPPGSP-----PKVEYVRLDIRDPAA 54

Query: 179 L------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
                  E D + HLA    P     +  +  + NV GT N+L      G  R ++TS+ 
Sbjct: 55  ADVFREREADAVVHLAFILDPPR---DGAERHRINVDGTQNVLDACAAAGVPRVVVTSSV 111

Query: 232 EVYG 235
            VYG
Sbjct: 112 AVYG 115

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 12/74 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP- 176
           +IV+TGG GF+G  L  RL A G  V+V+      R+            E+I  D +   
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVL-----SRRPGK----AEGLAEVITWDGLSLG 51

Query: 177 --LLLEVDQIYHLA 188
              L   D + +LA
Sbjct: 52  PWELPGADAVINLA 65

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE 180
           V G +G +G  +   L  RG  V +V    +G K         P  E++  D ++   + 
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSR--SGSKLA-----WLPGVEIVAADAMDASSVI 56

Query: 181 -----VDQIYHLACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
                 D IYH A PA       F P+           N++  A+  GA+ +L     +Y
Sbjct: 57  AAARGADVIYHCANPAYTRWEELFPPLME---------NVVAAAEANGAKLVLPGNVYMY 107

Query: 235 GDPLQHPQKET 245
           G     P  E 
Sbjct: 108 GPQAGSPITED 118

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 42/142 (29%), Positives = 59/142 (41%), Gaps = 17/142 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I++TG  G +G  LV  L  RG  VI      TGR             +L   D VE  
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVI-----GTGRS-----RASLFKLDLTDPDAVEEA 50

Query: 178 LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY- 234
           + +   D I + A        + +P    + NV+   N+   AK VGAR +  ST  V+ 
Sbjct: 51  IRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGARLIHISTDYVFD 110

Query: 235 GDPLQHPQKETYWGNVNPIGTY 256
           G   + P KE      NP+  Y
Sbjct: 111 GK--KGPYKEE--DAPNPLNVY 128

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT-----GRKENVMHHFGNPNFELIRH 171
             +V GG+GF+G HLV++L+ RG+ +V V D   T          V  H G    +L   
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTG----DLTDP 56

Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLT 228
             +E    E   + ++H    ASP H   N     K NV GT N++   ++ G +  + T
Sbjct: 57  QDLEKAFNEKGPNVVFHT---ASPDH-GSNDDLYYKVNVQGTRNVIEACRKCGVKKLVYT 112

Query: 229 STSEV 233
           S++ V
Sbjct: 113 SSASV 117

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
            ++++ G  GF+G HL  R++   D  +   +  T R  ++++H   P       D+   
Sbjct: 2   KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNH---PRMHFFEGDITIN 58

Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D I  L   A+P  Y   P++  + +    L ++  A + G   +  ST
Sbjct: 59  KEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 118

Query: 231 SEVYG 235
           SEVYG
Sbjct: 119 SEVYG 123

Length = 347

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I++TGG GF+G  L  RL  RG  V +     T       +            D     L
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTI----LTRSPPPGANTKWEGYKPWAGED--ADSL 54

Query: 179 LEVDQIYHLA 188
              D + +LA
Sbjct: 55  EGADAVINLA 64

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 16/150 (10%)

Query: 120 VVTGGAGFVGSHLVDRLIARGDS---VIVVDNFFTGRKENVMHHFGNPNF-ELIRHDV-- 173
           +VTGG GF+G H++  L+ R +    + V+D  F               +   I  D+  
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62

Query: 174 VEPLLLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TS 229
           +  L      V  + H A     V    N  +  + NV GT  +L    +   + L+ TS
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVD-VFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 230 TSEV-----YGDPLQHPQKETYWGNVNPIG 254
           + EV      G P+ +  ++T + + +   
Sbjct: 122 SIEVAGPNFKGRPIFNGVEDTPYEDTSTPP 151

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 34/155 (21%), Positives = 51/155 (32%), Gaps = 38/155 (24%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM------------------ 158
           +++++ GG G+ G      L  RG  V +VDN    R +  +                  
Sbjct: 1   MKVLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAW 60

Query: 159 -HHFGNPNFELIRHDVVEPLLL-------EVDQIYHLAC-PASP-----VHYKFNPVKTI 204
               G    E    D  +   L       E D + H A   ++P       +      T 
Sbjct: 61  KELTGKTI-EFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHA---NYTQ 116

Query: 205 KTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDP 237
             NV+GTLN+L   K        +   T   YG P
Sbjct: 117 HNNVIGTLNLLFAIKEFDPDCHLVKLGTMGEYGTP 151

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 42/135 (31%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-----VMHHFGNPN-----FE 167
           +I++ GG  F+G  LV+ L+A G  V V   F  GR +      V H  G+ N      E
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTV---FNRGRTKPDLPEGVEHIVGDRNDRDALEE 58

Query: 168 LIRH---DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
           L+     DVV      VD         +P                     L   K    +
Sbjct: 59  LLGGEDFDVV------VDT-----IAYTPRQ---------------VERALDAFKGRVKQ 92

Query: 225 FLLTSTSEVYGDPLQ 239
           ++  S++ VY  P +
Sbjct: 93  YIFISSASVYLKPGR 107

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 25/142 (17%)

Query: 102 VNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMH 159
           +N GGK+          + VTG +G++ S +V  L+ RG +V       T RK  E+++ 
Sbjct: 1   MNGGGKL----------VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA 50

Query: 160 HFG-NPNFELIRHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKT--IKTNVVGT 211
             G     +L + D++E    E      D ++H    ASPV +     +T  I   + GT
Sbjct: 51  LDGAKERLKLFKADLLEESSFEQAIEGCDAVFH---TASPVFFTVKDPQTELIDPALKGT 107

Query: 212 LNMLGLAKRVGA--RFLLTSTS 231
           +N+L   K   +  R +LTS++
Sbjct: 108 INVLNTCKETPSVKRVILTSST 129

Length = 322

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV- 173
           K   +++TGG G  G+ ++ R +      I + +    +++++   + N   +    DV 
Sbjct: 3   KDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVR 62

Query: 174 ----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML--GLAKRVGARFLL 227
               +      VD IYH A        +F+P++ +KTNV+GT N+L   +A  V     L
Sbjct: 63  DYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVVCL 122

Query: 228 TSTSEVY 234
           ++   VY
Sbjct: 123 STDKAVY 129

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVI 144
           +++ VTG  GF+GS +V  L+A G  V+
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVV 28

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRK 154
           I+VTGGAGF+GS++V  L  +G   ++VVDN   G K
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK 38

Length = 308

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIV---VDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           R  VTGG GF+G  LV RL+ R     V   V      R E +  ++G      +  D+ 
Sbjct: 2   RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLT 61

Query: 175 EPLL----------LEVDQIYHLACPASPVHYKFNP--VKTIKTNVVGTLNMLGLAKRVG 222
           EP L           ++D + HLA       Y            NV GT N++ LA+R+ 
Sbjct: 62  EPGLGLSEADIAELGDIDHVVHLAAI-----YDLTADEEAQRAANVDGTRNVVELAERLQ 116

Query: 223 AR-FLLTSTSEVYGD 236
           A  F   S+  V GD
Sbjct: 117 AATFHHVSSIAVAGD 131

Length = 657

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 53/160 (33%)

Query: 118 RIVVTGGAGFVGSHLVDRLI------------ARGDS----------VIVVDNFFTGRKE 155
            +++TG  GF+G  L+++L+             RG S          ++    F  GR  
Sbjct: 2   SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61

Query: 156 NVMHHFGNPNFE----LIRHDVVEP-----------LLLEVDQIYHLACPASPVHYKFNP 200
           N       P FE     I  D+ EP           L+ EV+ I H A  A+     F+ 
Sbjct: 62  N-------PLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCA--AT---VTFDE 109

Query: 201 --VKTIKTNVVGTLNMLGLAKRV--GARFLLTSTSEVYGD 236
              + +  NV+GTL +L LAKR      F+  ST+ V GD
Sbjct: 110 RLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGD 149

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 23/142 (16%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTG  G +G  L   L  RG  V+        R E           +L   + V  L+
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVA-----LDRPE----------LDLTDPEAVAALV 45

Query: 179 LEV--DQIYHLACPA-SPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
            E   D + + A  A + V   +  P      N +G  N+       GA  +  ST  V+
Sbjct: 46  REARPDVVVNAA--AYTAVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHISTDYVF 103

Query: 235 GDPLQHPQKETYWGNVNPIGTY 256
                 P +E       P+  Y
Sbjct: 104 DGAKGGPYRED--DPTGPLNVY 123

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVV 146
           I++TGG G +G  L  RL   G  V ++
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTIL 28

Length = 297

>gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 11/125 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDV--- 173
           R+++ G  GF+G+HL +RL+   +  +    +      + +  F G+P F  +  D+   
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDNYEV----YGLDIGSDAISRFLGHPRFHFVEGDISIH 372

Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPST 432

Query: 231 SEVYG 235
           SEVYG
Sbjct: 433 SEVYG 437

Length = 660

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 17/131 (12%)

Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIV----VDNFFTGRKENVMHHFGNPNFELI 169
            K   + V G  G  G  +V++L+A+G +V      VD   T   +       +P+ +++
Sbjct: 15  VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-------DPSLQIV 67

Query: 170 RHDVVEPL--LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-R 224
           R DV E    L+E   D    + C A+     F+P    K +  GT+N++   ++ G  R
Sbjct: 68  RADVTEGSDKLVEAIGDDSDAVIC-ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTR 126

Query: 225 FLLTSTSEVYG 235
           F+L S+  V G
Sbjct: 127 FILVSSILVNG 137

Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV 146
            + V G  GF+G ++V+RL  RG  VIV 
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVP 30

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.97
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.97
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.94
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.92
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.92
PLN02572	442	UDP-sulfoquinovose synthase	99.92
PLN02427	386	UDP-apiose/xylose synthase	99.92
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.92
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.91
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.91
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.91
PLN02214	342	cinnamoyl-CoA reductase	99.91
PLN00198	338	anthocyanidin reductase; Provisional	99.9
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.9
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
PLN02653	340	GDP-mannose 4,6-dehydratase	99.89
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PLN02650	351	dihydroflavonol-4-reductase	99.89
PLN02240	352	UDP-glucose 4-epimerase	99.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.89
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.88
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.88
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.88
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.88
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.88
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.88
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.88
PLN02260	668	probable rhamnose biosynthetic enzyme	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.87
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.87
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.86
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.85
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.85
PLN02686	367	cinnamoyl-CoA reductase	99.85
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.85
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.85
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.84
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.83
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.83
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.83
PLN02996	491	fatty acyl-CoA reductase	99.82
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.82
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.82
PLN02778	298	3,5-epimerase/4-reductase	99.82
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.8
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.8
PRK07201	657	short chain dehydrogenase; Provisional	99.79
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.79
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.78
PRK06194	287	hypothetical protein; Provisional	99.78
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.78
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.78
PRK06482	276	short chain dehydrogenase; Provisional	99.77
PRK05717	255	oxidoreductase; Validated	99.76
PRK07774	250	short chain dehydrogenase; Provisional	99.76
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.76
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.76
PLN02503	605	fatty acyl-CoA reductase 2	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.76
PLN02253	280	xanthoxin dehydrogenase	99.75
PRK06197	306	short chain dehydrogenase; Provisional	99.75
PRK06138	252	short chain dehydrogenase; Provisional	99.74
PRK06500	249	short chain dehydrogenase; Provisional	99.74
PRK06128	300	oxidoreductase; Provisional	99.74
PRK06196	315	oxidoreductase; Provisional	99.74
PRK06180	277	short chain dehydrogenase; Provisional	99.74
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.74
PRK07890	258	short chain dehydrogenase; Provisional	99.74
PRK08263	275	short chain dehydrogenase; Provisional	99.74
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.74
PRK07024	257	short chain dehydrogenase; Provisional	99.74
PRK05876	275	short chain dehydrogenase; Provisional	99.74
PLN03209	576	translocon at the inner envelope of chloroplast su	99.74
PRK05854	313	short chain dehydrogenase; Provisional	99.74
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.74
PRK12827	249	short chain dehydrogenase; Provisional	99.74
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK06179	270	short chain dehydrogenase; Provisional	99.73
PRK06914	280	short chain dehydrogenase; Provisional	99.73
PRK05866	293	short chain dehydrogenase; Provisional	99.73
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.73
PRK09186	256	flagellin modification protein A; Provisional	99.73
CHL00194	317	ycf39 Ycf39; Provisional	99.73
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.73
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.73
PRK07063	260	short chain dehydrogenase; Provisional	99.73
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.73
PRK07985	294	oxidoreductase; Provisional	99.73
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK05993	277	short chain dehydrogenase; Provisional	99.72
PLN02260	668	probable rhamnose biosynthetic enzyme	99.72
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.72
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.72
PRK06523	260	short chain dehydrogenase; Provisional	99.72
PRK12746	254	short chain dehydrogenase; Provisional	99.72
PRK09135	249	pteridine reductase; Provisional	99.71
PRK07775	274	short chain dehydrogenase; Provisional	99.71
PRK06701	290	short chain dehydrogenase; Provisional	99.71
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.71
PRK06398	258	aldose dehydrogenase; Validated	99.71
PRK07067	257	sorbitol dehydrogenase; Provisional	99.71
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.71
PRK07806	248	short chain dehydrogenase; Provisional	99.71
PRK08589	272	short chain dehydrogenase; Validated	99.71
PRK06182	273	short chain dehydrogenase; Validated	99.71
PRK07478	254	short chain dehydrogenase; Provisional	99.71
PRK08264	238	short chain dehydrogenase; Validated	99.71
PRK05875	276	short chain dehydrogenase; Provisional	99.7
PRK09134	258	short chain dehydrogenase; Provisional	99.7
PRK08267	260	short chain dehydrogenase; Provisional	99.7
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.7
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.7
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.7
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.7
PRK08628	258	short chain dehydrogenase; Provisional	99.7
PRK07825	273	short chain dehydrogenase; Provisional	99.7
PRK05872	296	short chain dehydrogenase; Provisional	99.7
PRK08643	256	acetoin reductase; Validated	99.69
PRK06114	254	short chain dehydrogenase; Provisional	99.69
PRK07856	252	short chain dehydrogenase; Provisional	99.69
PRK12747	252	short chain dehydrogenase; Provisional	99.69
PRK08265	261	short chain dehydrogenase; Provisional	99.69
PRK07454	241	short chain dehydrogenase; Provisional	99.69
PLN00016	378	RNA-binding protein; Provisional	99.69
PRK05693	274	short chain dehydrogenase; Provisional	99.69
PRK08339	263	short chain dehydrogenase; Provisional	99.69
PRK06123	248	short chain dehydrogenase; Provisional	99.69
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK08251	248	short chain dehydrogenase; Provisional	99.69
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.69
PRK07326	237	short chain dehydrogenase; Provisional	99.69
PRK06101	240	short chain dehydrogenase; Provisional	99.69
PRK06949	258	short chain dehydrogenase; Provisional	99.69
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.69
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.69
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.69
PRK06181	263	short chain dehydrogenase; Provisional	99.68
PRK07814	263	short chain dehydrogenase; Provisional	99.68
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.68
PRK09291	257	short chain dehydrogenase; Provisional	99.68
PRK07060	245	short chain dehydrogenase; Provisional	99.68
PRK12744	257	short chain dehydrogenase; Provisional	99.68
PRK07577	234	short chain dehydrogenase; Provisional	99.68
PRK06172	253	short chain dehydrogenase; Provisional	99.68
PRK07035	252	short chain dehydrogenase; Provisional	99.68
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.68
PRK06841	255	short chain dehydrogenase; Provisional	99.68
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PLN02780	320	ketoreductase/ oxidoreductase	99.68
PRK12742	237	oxidoreductase; Provisional	99.68
PRK07677	252	short chain dehydrogenase; Provisional	99.68
PRK12829	264	short chain dehydrogenase; Provisional	99.68
PRK09242	257	tropinone reductase; Provisional	99.67
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12828	239	short chain dehydrogenase; Provisional	99.67
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK07102	243	short chain dehydrogenase; Provisional	99.67
PRK07109	334	short chain dehydrogenase; Provisional	99.67
PRK12937	245	short chain dehydrogenase; Provisional	99.67
PRK05867	253	short chain dehydrogenase; Provisional	99.67
PRK12743	256	oxidoreductase; Provisional	99.67
PRK05650	270	short chain dehydrogenase; Provisional	99.67
PRK05855	582	short chain dehydrogenase; Validated	99.67
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.67
PRK07904	253	short chain dehydrogenase; Provisional	99.67
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.67
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.67
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.67
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.66
PRK08226	263	short chain dehydrogenase; Provisional	99.66
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.66
PRK10538	248	malonic semialdehyde reductase; Provisional	99.66
PRK06139	330	short chain dehydrogenase; Provisional	99.66
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.66
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.66
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.66
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.66
PRK07062	265	short chain dehydrogenase; Provisional	99.66
PRK09072	263	short chain dehydrogenase; Provisional	99.66
PRK07576	264	short chain dehydrogenase; Provisional	99.65
PRK06057	255	short chain dehydrogenase; Provisional	99.65
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.65
PRK07074	257	short chain dehydrogenase; Provisional	99.65
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.65
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.65
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.65
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK08278	273	short chain dehydrogenase; Provisional	99.65
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.65
PRK08703	239	short chain dehydrogenase; Provisional	99.65
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.64
PRK12939	250	short chain dehydrogenase; Provisional	99.64
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.64
PRK07831	262	short chain dehydrogenase; Provisional	99.63
PRK06483	236	dihydromonapterin reductase; Provisional	99.63
PRK12320	699	hypothetical protein; Provisional	99.63
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.63
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
PRK06484	520	short chain dehydrogenase; Validated	99.63
PRK07201	657	short chain dehydrogenase; Provisional	99.63
PRK07791	286	short chain dehydrogenase; Provisional	99.62
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK08219	227	short chain dehydrogenase; Provisional	99.62
KOG1208	314	consensus Dehydrogenases with different specificit	99.62
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.62
PRK07041	230	short chain dehydrogenase; Provisional	99.62
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.62
PRK07832	272	short chain dehydrogenase; Provisional	99.62
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.62
PRK05865	854	hypothetical protein; Provisional	99.61
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.61
PRK06198	260	short chain dehydrogenase; Provisional	99.61
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.61
PRK08324	681	short chain dehydrogenase; Validated	99.61
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.61
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.61
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.6
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.6
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.6
PRK06953	222	short chain dehydrogenase; Provisional	99.6
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.6
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
PRK06484	520	short chain dehydrogenase; Validated	99.59
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
PLN00015	308	protochlorophyllide reductase	99.59
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.59
PRK08017	256	oxidoreductase; Provisional	99.59
PRK07023	243	short chain dehydrogenase; Provisional	99.59
PRK07069	251	short chain dehydrogenase; Validated	99.59
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.59
PRK12367	245	short chain dehydrogenase; Provisional	99.58
PRK05884	223	short chain dehydrogenase; Provisional	99.58
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK08177	225	short chain dehydrogenase; Provisional	99.57
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.57
PRK06940	275	short chain dehydrogenase; Provisional	99.57
PRK06924	251	short chain dehydrogenase; Provisional	99.56
PRK06125	259	short chain dehydrogenase; Provisional	99.56
PRK08862	227	short chain dehydrogenase; Provisional	99.56
PRK08303	305	short chain dehydrogenase; Provisional	99.55
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.55
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.54
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.54
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
KOG0725	270	consensus Reductases with broad range of substrate	99.53
PRK05599	246	hypothetical protein; Provisional	99.52
PRK07578	199	short chain dehydrogenase; Provisional	99.52
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.51
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.51
COG1028	251	FabG Dehydrogenases with different specificities (	99.51
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.5
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.45
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.44
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.43
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.42
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.41
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.4
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.37
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.35
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.33
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.32
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.27
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.26
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.26
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.22
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.21
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.19
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.17
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.15
PRK06720	169	hypothetical protein; Provisional	99.15
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.14
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.13
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.12
KOG2774	366	consensus NAD dependent epimerase [General functio	99.0
PTZ00325	321	malate dehydrogenase; Provisional	98.98
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.94
COG2910	211	Putative NADH-flavin reductase [General function p	98.92
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.87
PLN00106	323	malate dehydrogenase	98.85
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.75
PRK08309	177	short chain dehydrogenase; Provisional	98.66
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.63
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.53
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.51
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.49
PRK09620	229	hypothetical protein; Provisional	98.43
PRK05086	312	malate dehydrogenase; Provisional	98.34
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.32
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.32
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.19
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.14
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.09
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.06
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.02
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.98
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.91
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.9
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.88
PRK14982	340	acyl-ACP reductase; Provisional	97.87
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.87
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.86
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.83
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.81
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.8
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.78
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.77
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.74
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.59
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.57
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.55
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.54
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.52
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.48
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.47
PRK05442	326	malate dehydrogenase; Provisional	97.45
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.43
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.41
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.4
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.37
PTZ00117	319	malate dehydrogenase; Provisional	97.36
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.35
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.34
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.33
PRK06223	307	malate dehydrogenase; Reviewed	97.3
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.26
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.25
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.25
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.24
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.23
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.2
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.18
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.15
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.14
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.13
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.11
PLN02602	350	lactate dehydrogenase	97.09
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.05
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.05
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.04
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.03
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	97.02
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	97.01
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.98
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.98
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.94
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.94
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.93
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.92
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.92
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.89
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.87
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.86
PRK08328	231	hypothetical protein; Provisional	96.85
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.84
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.84
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.83
COG3268	382	Uncharacterized conserved protein [Function unknow	96.81
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.81
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.76
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.74
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.68
PLN02383	344	aspartate semialdehyde dehydrogenase	96.68
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.67
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.67
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.66
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.63
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.63
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.62
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.55
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.55
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.54
PRK08223	287	hypothetical protein; Validated	96.53
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.51
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.49
PRK07411	390	hypothetical protein; Validated	96.46
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.44
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.4
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.38
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.34
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.34
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.33
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.32
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.32
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.27
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.25
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.23
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.22
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.21
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.09
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.07
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.06
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.05
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.03
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.95
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.9
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.9
TIGR01408	1008	Ube1 ubiquitin-activating enzyme E1. This model re	95.87
PRK04148	134	hypothetical protein; Provisional	95.77
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.77
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	95.76
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.76
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.72
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	95.71
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.69
PRK09496	453	trkA potassium transporter peripheral membrane com	95.68
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.64
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.62
PRK08655	437	prephenate dehydrogenase; Provisional	95.56
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.56
PRK09496	453	trkA potassium transporter peripheral membrane com	95.55
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.54
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.49
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.46
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.45
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.43
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.4
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.39
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.36
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.36
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PLN00203	519	glutamyl-tRNA reductase	95.3
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.26
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.24
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.17
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.16
PRK14852	989	hypothetical protein; Provisional	95.15
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.15
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.14
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.12
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.09
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.08
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.08
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.0
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.99
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.98
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	94.97
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.96
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	94.95
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.95
PRK14851	679	hypothetical protein; Provisional	94.9
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.89
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	94.89
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.83
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.78
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.78
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.75
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	94.74
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.63
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.56
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.54
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.54
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.53
PRK07877	722	hypothetical protein; Provisional	94.5
TIGR00036	266	dapB dihydrodipicolinate reductase.	94.49
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	94.47
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.46
PLN02928	347	oxidoreductase family protein	94.45
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.45
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.44
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	94.43
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	94.4
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	94.38
PRK13243	333	glyoxylate reductase; Reviewed	94.35
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.35
PRK06849	389	hypothetical protein; Provisional	94.35
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.33
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.33
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.29
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.15
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.15
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	94.03
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	94.01
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.99
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.97
PLN02494	477	adenosylhomocysteinase	93.97
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.95
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.95
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	93.94
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.91
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.9
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	93.89
PRK07417	279	arogenate dehydrogenase; Reviewed	93.88
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	93.88
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.8
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	93.79

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.2e-47  Score=366.36  Aligned_cols=284  Identities=67%  Similarity=0.984  Sum_probs=223.6

Q ss_pred             CCccccccCC-CCCCCCCCCCCCCCCCCCCcchhHHHHHhhhhHHHHHHHHHHHHHHhhccCCCCCCCCC----CCCccc
Q 022900            1 MGSELIYRGH-DSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYG----GARGHV   75 (290)
Q Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~f~~~p~~~~~~~~----~~~~~~   75 (290)
                      |+|||+||++ +.+..++.|+|||+|||+|++|+++|+++||||+|+++|++|+++||++.|.++++++.    ...+..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (442)
T PLN02206          1 MASELINRRHEETQPTADAYYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTIFPSSSQPSPYSVDPLSGYGI   80 (442)
T ss_pred             CCccccccCCCCCCCCCCCCCCCCCCCcccCccHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccccccc
Confidence            9999999999 44777999999999999999999999999999999999999999999998876443321    011000


Q ss_pred             c-ccCCCcccccchhhhhcCCcccccccCCCCCCCCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Q 022900           76 A-ISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK  154 (290)
Q Consensus        76 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~  154 (290)
                      . ...........+.......   +......++.|.+...++|+|+||||+||||++|++.|+++|++|++++|......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~  157 (442)
T PLN02206         81 RPDESYVPAIQAQRKPSLEYL---NRIGNSGGKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK  157 (442)
T ss_pred             cccccccccccceeccccccc---ccccccCCcCccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch
Confidence            0 0000001111111111110   11113367999998899999999999999999999999999999999998655444


Q ss_pred             hhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Q 022900          155 ENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (290)
Q Consensus       155 ~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vy  234 (290)
                      +.........+++++.+|+.++.+.++|+|||+|+...+..+..++..++++|+.|+.+++++|++.++++|++||.++|
T Consensus       158 ~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VY  237 (442)
T PLN02206        158 ENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  237 (442)
T ss_pred             hhhhhhccCCceEEEECCccChhhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHh
Confidence            44333334567899999999998889999999999876666667888999999999999999999988899999999999


Q ss_pred             cCCCCCCCCCCCCC---C---CChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          235 GDPLQHPQKETYWG---N---VNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       235 g~~~~~~~~E~~~~---~---~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |.....+..|+.|.   +   .++|+.+|...|.++..|.++++++++++|++++.+.+
T Consensus       238 g~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        238 GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR  296 (442)
T ss_pred             CCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence            98777777887542   2   35699999999999999998899999999999987753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=9.1e-44  Score=339.19  Aligned_cols=269  Identities=55%  Similarity=0.848  Sum_probs=209.1

Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHhhhhHHHHHHHHHHHHHHhhccCCCCCCC-CCCCCccccccCCCcccccchhhhhc
Q 022900           15 ATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPAS-YGGARGHVAISDSLSYYPVETYQRAY   93 (290)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~f~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (290)
                      .++.|+|||+++++|++|+++|+++||||+|+++|++|+++||++.|++++++ ..+.........+.....  ......
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   99 (436)
T PLN02166         22 QSSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPSLSRLGPAESTSLITRSVSIAVTDS--PPSSST   99 (436)
T ss_pred             ccCCCCCCCCCCCccccchHHHHHHhhhHHHHHHHHHHHHHHHhhCCccccCCccccccccccccccccccC--ccchhh
Confidence            38899999766669999999999999999999999999999999888865433 111110000000000000  000000


Q ss_pred             CCcccccccCCCCCCCCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccc
Q 022900           94 NPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV  173 (290)
Q Consensus        94 ~~~~~~~~~~~~~~~p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~  173 (290)
                      ..+  .......+++|.+...+.|+|+||||+||||++|++.|+++|++|++++|......+.........+++++..|+
T Consensus       100 ~~~--~~~~~~~~~~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di  177 (436)
T PLN02166        100 FNS--SGGGGRTGRVPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDV  177 (436)
T ss_pred             ccc--cccccccCCCCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcc
Confidence            000  112234689999999999999999999999999999999999999999986544444333333445789999999


Q ss_pred             ccccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC------
Q 022900          174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW------  247 (290)
Q Consensus       174 ~~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~------  247 (290)
                      .+..+.++|+|||+|+...+.....++..++++|+.|+.+++++|++.++++|++||++|||.....+.+|+.+      
T Consensus       178 ~~~~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        178 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             ccccccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence            99988899999999998666566678889999999999999999999888999999999999877777888743      


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+.++|+.+|..+|++++.+.++++++++++|++++.+.+
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPR  297 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCC
Confidence            3346799999999999999999899999999999998864

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=1.3e-30  Score=227.58  Aligned_cols=175  Identities=65%  Similarity=1.011  Sum_probs=164.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~  193 (290)
                      .++++|+||||.||||+||++.|..+|+.|+++|...+..++++........++++..|++.+.+.++|.|+|+|++.+|
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp  104 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP  104 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence            45689999999999999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCCCCCCh------hhhhHHHHHHHHHHH
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNP------IGTYFFSFSLIFLVF  267 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p------y~~~k~~~e~~~~~~  267 (290)
                      .++.++|.+++.+|+.|+.+++..|++.++||++.||+.|||++..+|+.|++|+.++|      |+..|..+|.++-.|
T Consensus       105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y  184 (350)
T KOG1429|consen  105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY  184 (350)
T ss_pred             cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999988887      455556679999999


Q ss_pred             HHHhCCCeeEEEeeeeecccC
Q 022900          268 ISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      .++.|+++.|.|++|-.++.+
T Consensus       185 ~k~~giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  185 HKQEGIEVRIARIFNTYGPRM  205 (350)
T ss_pred             hcccCcEEEEEeeecccCCcc
Confidence            999999999999999877654

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=9.3e-30  Score=224.82  Aligned_cols=165  Identities=32%  Similarity=0.498  Sum_probs=150.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~Ag  189 (290)
                      |+|+||||+||||+|.+.+|++.|++|+++|+..+...+.+....    +.++.+|+.|..+       .++|.|||+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~----~~f~~gDi~D~~~L~~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----FKFYEGDLLDRALLTAVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc----CceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence            579999999999999999999999999999998888877765432    7889999988754       36999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~  267 (290)
                      ......+..+|.+.++.|+.||++|+++|++.++ +|||-||++|||.+...|+.|+.+ .|.+|||.+|...|++++.+
T Consensus        77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~  156 (329)
T COG1087          77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDA  156 (329)
T ss_pred             ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHH
Confidence            8888888999999999999999999999999996 999999999999999999999885 78899999999999999999


Q ss_pred             HHHhCCCeeEEEeeeeec
Q 022900          268 ISQFRPSRKACRFFILLY  285 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr~  285 (290)
                      .+.++++++++|+||+=+
T Consensus       157 ~~a~~~~~v~LRYFN~aG  174 (329)
T COG1087         157 AKANPFKVVILRYFNVAG  174 (329)
T ss_pred             HHhCCCcEEEEEeccccc
Confidence            999999999999999854

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.94  E-value=6.4e-26  Score=210.75  Aligned_cols=174  Identities=28%  Similarity=0.353  Sum_probs=142.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc------CCCCeEEEEccccccc-----ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF------GNPNFELIRHDVVEPL-----LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~-----~~~vD  182 (290)
                      .++|+|+||||+||||++|+++|+++|++|++++|.............      ...++.++.+|+.+..     +.++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            567899999999999999999999999999999986433222221111      1135788999998753     46799


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSF  260 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~  260 (290)
                      +|||+|+.........++..++++|+.||.+++++|++.+. +|||+||+++||.....+..|+. ..|.++|+.+|...
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            99999997655555667888999999999999999999885 99999999999976666655543 45778999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |.+++.|.++++++++++|++++.+.+
T Consensus       173 e~~~~~~~~~~~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        173 ELYADVFARSYEFNAIGLRYFNVFGRR  199 (348)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCcC
Confidence            999999998899999999999998863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.92  E-value=3.1e-24  Score=199.04  Aligned_cols=167  Identities=18%  Similarity=0.211  Sum_probs=136.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccc-cc-----cccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EP-----LLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~-~~-----~~~~vD~vih~A  188 (290)
                      ||+|+||||+||||++|+++|+++ |++|++++|...    ..........++++.+|+. +.     .+.++|+|||+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a   76 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD----RLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV   76 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH----HHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence            468999999999999999999986 799999987432    1222223356899999997 33     235799999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC--------CCCChhhhhHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW--------GNVNPIGTYFFSF  260 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~--------~~~~py~~~k~~~  260 (290)
                      +...+.....++...+++|+.|+.+++++|++.++++|++||.++||.....++.|+..        .+.++|+.+|...
T Consensus        77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~  156 (347)
T PRK11908         77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLM  156 (347)
T ss_pred             ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHH
Confidence            98666556678888999999999999999998888999999999999765555655432        2445899999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      |.++..+.++++++++++|++++.+.
T Consensus       157 e~~~~~~~~~~~~~~~ilR~~~v~Gp  182 (347)
T PRK11908        157 DRVIWAYGMEEGLNFTLFRPFNWIGP  182 (347)
T ss_pred             HHHHHHHHHHcCCCeEEEeeeeeeCC
Confidence            99999999889999999999998775

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=9e-25  Score=194.96  Aligned_cols=170  Identities=27%  Similarity=0.399  Sum_probs=151.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEcccccccc-------cCCCEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPLL-------LEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~-------~~vD~v  184 (290)
                      .++|+||||+||||+|.+.+|+++|+.|+++|+......+.+....    ....+.+..+|+.|..+       .++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            4689999999999999999999999999999998766655544332    24689999999998754       259999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-C-CCChhhhhHHHHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-G-NVNPIGTYFFSFS  261 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~-~~~py~~~k~~~e  261 (290)
                      +|.|++.....+..+|..+...|+.|++++++.|++.+. .+||.||++|||.+...|++|..+ . |.+||+.+|...|
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE  161 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE  161 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence            999999888888899999999999999999999999995 899999999999999999999875 3 7899999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeec
Q 022900          262 LIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      .++..+...++...+.+|+|++.+
T Consensus       162 ~i~~d~~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  162 EIIHDYNKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             HHHHhhhccccceEEEEEeccccC
Confidence            999999999999999999999876

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.92  E-value=6.7e-24  Score=203.20  Aligned_cols=174  Identities=21%  Similarity=0.176  Sum_probs=132.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh----------------hhhc--ccCCCCeEEEEcccc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE----------------NVMH--HFGNPNFELIRHDVV  174 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~----------------~~~~--~~~~~~v~~~~~D~~  174 (290)
                      ..++|+|+||||+||||++|++.|+++|++|++++|...+..+                .+..  .....+++++.+|+.
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            4678899999999999999999999999999999864322110                0100  011246889999998


Q ss_pred             ccc-----cc--CCCEEEEcccCCCCCCCCCC---hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCCC
Q 022900          175 EPL-----LL--EVDQIYHLACPASPVHYKFN---PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       175 ~~~-----~~--~vD~vih~Ag~~~~~~~~~~---~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~~  242 (290)
                      +..     +.  ++|+|||+|+.........+   +..++++|+.|+.+++++|++.++  +||++||.++||... .+.
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~  202 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDI  202 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCC
Confidence            764     22  58999999987543333333   345689999999999999998873  899999999999643 222


Q ss_pred             CC-----------C----CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          243 KE-----------T----YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       243 ~E-----------~----~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +|           +    ...+.+||+.+|...|.+++.|.+++|++++++|++++.+.+
T Consensus       203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR  262 (442)
T ss_pred             cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCC
Confidence            22           1    234567999999999999999999999999999999997764

>PLN02427 UDP-apiose/xylose synthase

Probab=99.92  E-value=5e-24  Score=200.57  Aligned_cols=174  Identities=20%  Similarity=0.223  Sum_probs=134.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcc--cCCCCeEEEEccccccc-----ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~-----~~~vD~vi  185 (290)
                      .+.|+|+||||+||||++|+++|+++ |++|++++|+...........  ....+++++.+|+.+..     +.++|+||
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            45678999999999999999999998 599999987543221111000  01246899999998763     44799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC------------------
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW------------------  247 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~------------------  247 (290)
                      |+|+...+..+..++.+.+..|+.++.+++++|++.+++||++||.++||.....+..|+.+                  
T Consensus        92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~  171 (386)
T PLN02427         92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCI  171 (386)
T ss_pred             EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccc
Confidence            99997655444556677788999999999999998888999999999999653322222210                  


Q ss_pred             -----CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          248 -----GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       248 -----~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                           .+.++|+.+|...|+++..+.++++++++++|++++.+.+
T Consensus       172 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        172 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             cCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCC
Confidence                 1235799999999999999988899999999999998865

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=6.2e-24  Score=187.27  Aligned_cols=170  Identities=27%  Similarity=0.398  Sum_probs=148.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCC-CCchhhhhcccCCCCeEEEEcccccccc-----c--CCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPLL-----L--EVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~-----~--~vD~vih  186 (290)
                      |+++||||+||||+.+++.++++..  +|+.+|... ....+.+..+.+.++..++++|+.|..+     .  ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            5799999999999999999999854  588888763 5667777777788899999999998753     2  5999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCC--CCCCCC-CCCCChhhhhHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQH--PQKETY-WGNVNPIGTYFFSFS  261 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~--~~~E~~-~~~~~py~~~k~~~e  261 (290)
                      .|+-+....+-.+|...+++|+.||.++++++++...  ||+++||..|||+-...  .+.|+. ..|.+||+.+|.+..
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            9998777778889999999999999999999999873  99999999999975553  466655 588899999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      .+++.|...||++++|.|.+|..++
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGP  185 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGP  185 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCC
Confidence            9999999999999999999997654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.91  E-value=2.5e-23  Score=193.57  Aligned_cols=173  Identities=18%  Similarity=0.099  Sum_probs=132.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      ..+|+|+||||+||||++++++|+++|++|++++|+...............+++++.+|+.+..     +.++|+|||+|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            4678999999999999999999999999999998864332222222212356889999998763     45799999999


Q ss_pred             cCCCCCC--CCCChH-----HHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCC-----CCCCCCCCCCC----
Q 022900          189 CPASPVH--YKFNPV-----KTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-----HPQKETYWGNV----  250 (290)
Q Consensus       189 g~~~~~~--~~~~~~-----~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~-----~~~~E~~~~~~----  250 (290)
                      +......  ...++.     .++++|+.|+.+++++|++.+ . +||++||.++||....     .+++|+.+.+.    
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            9754332  223343     355667899999999998875 3 9999999999985321     34667643322    


Q ss_pred             ------ChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          251 ------NPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       251 ------~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                            .||+.+|...|.++..|.+.++++++++|++++.+.
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp  209 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGP  209 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCC
Confidence                  489999999999999999999999999999999875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.91  E-value=3e-23  Score=207.89  Aligned_cols=172  Identities=20%  Similarity=0.282  Sum_probs=141.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cccCCCEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQI  184 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~vD~v  184 (290)
                      ..-++|+|+||||+||||++|+++|+++ |++|++++|.......    .....+++++.+|+++.      .+.++|+|
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~V  386 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLGHPRFHFVEGDISIHSEWIEYHIKKCDVV  386 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcCCCceEEEeccccCcHHHHHHHhcCCCEE
Confidence            3346789999999999999999999986 7999999986432211    12234688999999763      24579999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCCC--------CCChhhhh
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWG--------NVNPIGTY  256 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~--------~~~py~~~  256 (290)
                      ||+||...+..+..++..++++|+.++.+++++|++.+++|||+||.++||.....+++|+.+.        +.++|+.+
T Consensus       387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s  466 (660)
T PRK08125        387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVS  466 (660)
T ss_pred             EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHH
Confidence            9999987665666778889999999999999999998889999999999997655677776531        23579999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          257 FFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       257 k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |...|.++..+.+.++++++++|++++.+.+
T Consensus       467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR  497 (660)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence            9999999999998899999999999998754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.91  E-value=3.3e-23  Score=191.90  Aligned_cols=169  Identities=22%  Similarity=0.239  Sum_probs=134.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc------CCCCeEEEEccccccc-----cc--CCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF------GNPNFELIRHDVVEPL-----LL--EVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~------~~~~v~~~~~D~~~~~-----~~--~vD  182 (290)
                      |+|+||||+||||++++++|+++|++|++++|..... .+......      ...+++++.+|+++..     +.  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999864321 11111111      1246889999998764     23  479


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYF  257 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~----riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k  257 (290)
                      +|||+|+.........++...+++|+.|+.+++++|.+.+.    +||++||.++||.....+..|+. ..+.++|+.+|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99999997654444456677889999999999999998762    79999999999976666676664 35778999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          258 FSFSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       258 ~~~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      ...|.++..+.+++++++++.|+++...
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~g  188 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHES  188 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccCC
Confidence            9999999999999999999999887643

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=99.91  E-value=4.8e-23  Score=191.09  Aligned_cols=169  Identities=20%  Similarity=0.221  Sum_probs=135.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh-hhcccC-CCCeEEEEccccccc-----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-VMHHFG-NPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~-~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      .++|+|+||||+||||++++++|+++|++|++++|........ ...... ..+++++.+|+.+..     +.++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            4578999999999999999999999999999999864332111 111111 235888999998753     457999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCC-ccccCCCC---CCCCCCCCC-------CCChhh
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPLQ---HPQKETYWG-------NVNPIG  254 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~-~vyg~~~~---~~~~E~~~~-------~~~py~  254 (290)
                      +|+..     ..++..++++|+.|+.+++++|++.+. +||++||. ++||....   .+++|+.|.       +.++|+
T Consensus        88 ~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         88 TASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             ecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            99863     246788999999999999999999885 89999996 58985432   347777542       456899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+|...|.++..+.++++++++++|++++.+..
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP  195 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence            999999999999999899999999999998764

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.90  E-value=8.1e-23  Score=188.82  Aligned_cols=172  Identities=17%  Similarity=0.163  Sum_probs=132.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh--hhcccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      .++++|+||||+||||++|+++|+++|++|++++|........  .......++++++.+|+.++.     +.++|+|||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            4578999999999999999999999999999888764322111  111111236888999998764     457999999


Q ss_pred             cccCCCCCCCCCCh-HHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCC----CCCCCCCCCC----------CC
Q 022900          187 LACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDP----LQHPQKETYW----------GN  249 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~----~~~~~~E~~~----------~~  249 (290)
                      +|+...  ....++ ..++++|+.|+.+++++|.+.+  ++||++||.++||..    ...+.+|..|          .+
T Consensus        87 ~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         87 VATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             eCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            999632  122334 3578999999999999998763  499999999999853    2334555533          24


Q ss_pred             CChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          250 VNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+||+.+|...|.++..|.++++++++++|++++.+..
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS  202 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence            67899999999999999999999999999999998763

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.90  E-value=2.7e-23  Score=189.28  Aligned_cols=151  Identities=21%  Similarity=0.145  Sum_probs=124.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~Ag  189 (290)
                      |+|+||||+||||++++++|+++| +|++++|...                .+.+|+++..     +.  ++|+|||||+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa   63 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA   63 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence            479999999999999999999999 7998887421                1345776653     23  5899999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      .......+.+++..+++|+.|+.+++++|++.++++|++||..|||.....|+.|+.. .|.++|+.+|...|.++..+ 
T Consensus        64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~-  142 (299)
T PRK09987         64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH-  142 (299)
T ss_pred             cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh-
Confidence            8776667778888899999999999999999999999999999999877778888753 57788999999988877654 


Q ss_pred             HHhCCCeeEEEeeeeecccC
Q 022900          269 SQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~~  288 (290)
                         ..+.+++|++++.+.++
T Consensus       143 ---~~~~~ilR~~~vyGp~~  159 (299)
T PRK09987        143 ---CAKHLIFRTSWVYAGKG  159 (299)
T ss_pred             ---CCCEEEEecceecCCCC
Confidence               34679999999987643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.90  E-value=1.5e-22  Score=187.97  Aligned_cols=173  Identities=21%  Similarity=0.228  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~  187 (290)
                      ++|+|+||||+||||+++++.|+++|++|++++|+...............++.++.+|+.+..     +.  ++|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            568999999999999999999999999999999865433222111111235778889998764     22  47999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCC-CCCCCCC-CCCCChhhhhHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-HPQKETY-WGNVNPIGTYFFSFSLI  263 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~-~~~~E~~-~~~~~py~~~k~~~e~~  263 (290)
                      ||.........++..++++|+.|+.+++++|++.+ . +||++||.++||.... .+..|+. ..+.++|+.+|...|.+
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  162 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV  162 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence            99654444556788899999999999999998876 3 8999999999986432 3566654 35678999999999999


Q ss_pred             HHHHHHHh-------CCCeeEEEeeeeeccc
Q 022900          264 FLVFISQF-------RPSRKACRFFILLYRN  287 (290)
Q Consensus       264 ~~~~~~~~-------gl~~~ilR~~~lr~~~  287 (290)
                      ++.+.+++       +++++++|++++.+.+
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       163 IASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             HHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            99888765       8999999999998753

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=1.8e-22  Score=185.41  Aligned_cols=173  Identities=20%  Similarity=0.183  Sum_probs=134.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh--hccc-CCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHF-GNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~--~~~~-~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+........  .... ...+++++.+|+++..     +.++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            4689999999999999999999999999999887654322211  1111 1246889999998764     457999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEcCCccccCC-----CCCCCCCCCCCC-------CCh
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G-ARFLLTSTSEVYGDP-----LQHPQKETYWGN-------VNP  252 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~-~riV~vSS~~vyg~~-----~~~~~~E~~~~~-------~~p  252 (290)
                      |||.........++..++++|+.|+.+++++|.+. + ++||++||.++|+..     ...+++|+.+..       .++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            99965332234456788999999999999999875 3 489999999877543     234567776532       357


Q ss_pred             hhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          253 IGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |+.+|...|.++..|.++++++++++|++++.+..
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~  198 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI  198 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence            99999999999999999899999999999997753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=2.2e-22  Score=186.02  Aligned_cols=172  Identities=19%  Similarity=0.205  Sum_probs=135.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc-----CCCCeEEEEccccccc-----cc--C
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF-----GNPNFELIRHDVVEPL-----LL--E  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~-----~~~~v~~~~~D~~~~~-----~~--~  180 (290)
                      .++|+|+||||+||||.+++++|+++|++|++++|..... .+.+....     ...++.++.+|+.+..     +.  +
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            4578999999999999999999999999999998854321 11111111     1245889999998763     22  4


Q ss_pred             CCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC------eEEEEcCCccccCCCCCCCCCCC-CCCCChh
Q 022900          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA------RFLLTSTSEVYGDPLQHPQKETY-WGNVNPI  253 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~------riV~vSS~~vyg~~~~~~~~E~~-~~~~~py  253 (290)
                      +|+||||||.........++...+++|+.|+.+++++|++.+.      +||++||.++||.... +.+|+. ..+.++|
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y  162 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPY  162 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChh
Confidence            7999999997554444556778889999999999999988763      7999999999997654 666655 3567789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          254 GTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +.+|...|.+++.+.++++++++..|+++....
T Consensus       163 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp  195 (340)
T PLN02653        163 AVAKVAAHWYTVNYREAYGLFACNGILFNHESP  195 (340)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEeeeccccCC
Confidence            999999999999999999999888898876543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=3.7e-22  Score=182.70  Aligned_cols=170  Identities=21%  Similarity=0.226  Sum_probs=130.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh--hhhccc-CCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHF-GNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~-~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+......  .+.... ...+++++.+|+.++.     +.++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            46799999999999999999999999999999886432211  111111 1247889999998763     467999999


Q ss_pred             cccCCCCCCCCCCh-HHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCCc--cccCC---CCCCCCCCCCC-C------CC
Q 022900          187 LACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSE--VYGDP---LQHPQKETYWG-N------VN  251 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~-~~-riV~vSS~~--vyg~~---~~~~~~E~~~~-~------~~  251 (290)
                      +|+...  ....++ ..++++|+.|+.+++++|++. +. +||++||.+  +|+..   ...+++|+.+. +      .+
T Consensus        83 ~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~  160 (322)
T PLN02662         83 TASPFY--HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL  160 (322)
T ss_pred             eCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence            999643  122344 378999999999999999887 64 999999986  47532   22356776532 2      25


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|+.+|...|.++..+.++++++++++|++++.+.
T Consensus       161 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp  195 (322)
T PLN02662        161 WYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGP  195 (322)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCC
Confidence            79999999999999999889999999999998764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.89  E-value=5.2e-22  Score=184.45  Aligned_cols=170  Identities=21%  Similarity=0.211  Sum_probs=129.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc-----ccCCCEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~-----~~~vD~vi  185 (290)
                      ..|+|+||||+||||++++++|+++|++|++++|+...... .....    ...++.++.+|+.+..     +.++|+||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKK-VKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH-HHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            45789999999999999999999999999999886433221 11111    1135888999998753     45799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCC-CCCC-CCCCCCC----------CCC
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP-LQHP-QKETYWG----------NVN  251 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~-~~~~-~~E~~~~----------~~~  251 (290)
                      |+|+.... ...+....++++|+.|+.+++++|.+.+ . +|||+||.++|+.. ...+ ++|+.+.          +.+
T Consensus        83 H~A~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         83 HVATPMDF-ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EeCCCCCC-CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            99986421 1122234789999999999999999876 4 89999999877543 2233 4666432          235


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|+.+|...|.++..|.+++|++++++|++++.+.
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp  196 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGP  196 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECC
Confidence            89999999999999999999999999999998775

>PLN02240 UDP-glucose 4-epimerase

Probab=99.89  E-value=6.6e-22  Score=183.32  Aligned_cols=173  Identities=27%  Similarity=0.377  Sum_probs=136.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh---hhhccc--CCCCeEEEEccccccc-----c--cCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE---NVMHHF--GNPNFELIRHDVVEPL-----L--LEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~--~~~~v~~~~~D~~~~~-----~--~~v  181 (290)
                      +++|+|+||||+||||.+++++|+++|++|++++|.......   .+....  ...+++++.+|+.++.     +  .++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            567899999999999999999999999999999875332221   111111  1246788999998764     2  268


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHH
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFS  259 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~  259 (290)
                      |+||||||.........++..++++|+.++.+++++|.+.+. +||++||+++||.....+++|+. ..+.++|+.+|..
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  162 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF  162 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            999999997543344567888999999999999999998874 89999999999976666777765 3456789999999


Q ss_pred             HHHHHHHHHHH-hCCCeeEEEeeeeecc
Q 022900          260 FSLIFLVFISQ-FRPSRKACRFFILLYR  286 (290)
Q Consensus       260 ~e~~~~~~~~~-~gl~~~ilR~~~lr~~  286 (290)
                      .|.+++.+... .+++++++|++++.+.
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~R~~~v~G~  190 (352)
T PLN02240        163 IEEICRDIHASDPEWKIILLRYFNPVGA  190 (352)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeecCcCCC
Confidence            99999988754 5889999999877653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=8.5e-22  Score=180.74  Aligned_cols=170  Identities=22%  Similarity=0.262  Sum_probs=130.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc-----ccCCCEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~-----~~~vD~vi  185 (290)
                      .+++|+||||+||||++++++|+++|++|+++.|+..... ......    ...+++++.+|++++.     +.++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK-KTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH-HHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            4689999999999999999999999999999888654322 111111    1246889999998764     45799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCCccc--cCC---CCCCCCCCCCC-------CCC
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY--GDP---LQHPQKETYWG-------NVN  251 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~-riV~vSS~~vy--g~~---~~~~~~E~~~~-------~~~  251 (290)
                      |+|+.... ...+...+++++|+.|+.+++++|++. +. |||++||.++|  +..   ...+++|+.|.       +.+
T Consensus        83 h~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFF-TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCC-CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            99996422 112223457899999999999999885 54 99999998754  432   23457777653       246


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|+.+|...|..+..|.++++++++++||+++.+.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp  196 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGP  196 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCC
Confidence            79999999999999999989999999999998764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.89  E-value=9.7e-22  Score=182.62  Aligned_cols=172  Identities=25%  Similarity=0.298  Sum_probs=130.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEE-EeCCCCCc-hhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFTGR-KENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih  186 (290)
                      +|+|+||||+||||+++++.|+++|++|++ ++|..... ...+.......+++++.+|+.+..     +.  ++|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            468999999999999999999999987554 44432111 111111112246788899998753     22  4899999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc---------C-CeEEEEcCCccccCCC--CCCCCCCC-CCCCChh
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---------G-ARFLLTSTSEVYGDPL--QHPQKETY-WGNVNPI  253 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~-~riV~vSS~~vyg~~~--~~~~~E~~-~~~~~py  253 (290)
                      |||.........++..++++|+.|+.+++++|.+.         + ++||++||.++||...  ..+++|+. ..+.++|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            99975443344567889999999999999999762         3 4899999999998642  33566764 3567899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          254 GTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +.+|...|.++..+.++++++++++|++++.+..
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPY  194 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCC
Confidence            9999999999999999999999999999987654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.88  E-value=3.6e-22  Score=174.16  Aligned_cols=165  Identities=27%  Similarity=0.380  Sum_probs=137.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEcccCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLACPA  191 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~Ag~~  191 (290)
                      |+||||+||||.+++++|+++|+.|+.+.|...........    .+++++..|+.+...       .++|+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            79999999999999999999999999988754333222111    178999999987632       2579999999974


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      .......++...++.|+.++.+++++|++.++ ++|++||..+|+.....+++|+.+ .+.++|+..|...|..++.+.+
T Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            32223367788999999999999999999986 999999999999987777777763 5778999999999999999999


Q ss_pred             HhCCCeeEEEeeeeeccc
Q 022900          270 QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~~  287 (290)
                      +++++++++|++++.+..
T Consensus       157 ~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  157 KYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHTSEEEEEEESEEESTT
T ss_pred             cccccccccccccccccc
Confidence            999999999999998876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.88  E-value=9.3e-22  Score=178.65  Aligned_cols=164  Identities=31%  Similarity=0.434  Sum_probs=130.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCC-CEEEEcccCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEV-DQIYHLACPA  191 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~v-D~vih~Ag~~  191 (290)
                      +|+||||+||||++|++.|.++|++|++++|.........      ..++++.+|+++.     ...++ |+|||+|+..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~   75 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQS   75 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEccccC
Confidence            4999999999999999999999999999998644333222      4566777777664     23345 9999999976


Q ss_pred             CCCCCCC-ChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCC-CCCCCCCC--CCCCCChhhhhHHHHHHHHHH
Q 022900          192 SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKET--YWGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       192 ~~~~~~~-~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~-~~~~~~E~--~~~~~~py~~~k~~~e~~~~~  266 (290)
                      ....... ++...+++|+.|+.+++++|++.++ +||+.||.++|+.. ...+..|+  .+.+.++|+.+|...|.++..
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~  155 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRA  155 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence            5444333 4667999999999999999999664 99998888877754 33367776  456666899999999999999


Q ss_pred             HHHHhCCCeeEEEeeeeeccc
Q 022900          267 FISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +.+.++++++++|+.++.+..
T Consensus       156 ~~~~~~~~~~ilR~~~vyGp~  176 (314)
T COG0451         156 YARLYGLPVVILRPFNVYGPG  176 (314)
T ss_pred             HHHHhCCCeEEEeeeeeeCCC
Confidence            999889999999999877643

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.88  E-value=4.8e-22  Score=186.39  Aligned_cols=170  Identities=24%  Similarity=0.259  Sum_probs=133.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      .++|+|+||||+||||+++++.|.++|++|++++|.......   .  .....+++.+|+.+..     +.++|+|||+|
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---E--DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---c--ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            467899999999999999999999999999999985321110   0  0113567788987652     45799999999


Q ss_pred             cCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC----CCCCCCC---CCCCChhhhhHHH
Q 022900          189 CPASPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ----HPQKETY---WGNVNPIGTYFFS  259 (290)
Q Consensus       189 g~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~----~~~~E~~---~~~~~py~~~k~~  259 (290)
                      +...+.. ...++...+..|+.++.+++++|++.++ +||++||.++||....    .++.|+.   ..+.++|+.+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            9654322 2235566788999999999999999885 9999999999996533    1355543   3567799999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          260 FSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       260 ~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      .|.+++.+.++++++++++|++++.+.++
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFG  202 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence            99999999999999999999999988754

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.88  E-value=2.2e-21  Score=178.90  Aligned_cols=170  Identities=23%  Similarity=0.397  Sum_probs=133.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhc--ccCCCCeEEEEccccccc-----cc--CCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~  187 (290)
                      |+|+||||+||||.++++.|+++|++|++++|...........  .....++.++.+|+.+..     +.  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            4799999999999999999999999999998653322221111  112345778889998764     22  58999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC--CCCChhhhhHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW--GNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~--~~~~py~~~k~~~e~~~  264 (290)
                      |+.........++.+.+++|+.++.+++++|++.+. +||++||+++||.....+++|+.+  .+..+|+.+|...|.++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            997543333455678899999999999999999885 899999999999766667778764  35789999999999999


Q ss_pred             HHHHHHh-CCCeeEEEeeeeecc
Q 022900          265 LVFISQF-RPSRKACRFFILLYR  286 (290)
Q Consensus       265 ~~~~~~~-gl~~~ilR~~~lr~~  286 (290)
                      +.+.+.+ +++++++|++++.+.
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~  183 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGA  183 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCC
Confidence            9987764 889999999887664

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.88  E-value=8.8e-22  Score=179.47  Aligned_cols=161  Identities=20%  Similarity=0.313  Sum_probs=120.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccc------ccccc-----cCCCEEEEc
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV------VEPLL-----LEVDQIYHL  187 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~------~~~~~-----~~vD~vih~  187 (290)
                      |+||||+||||++|+++|+++|++++++.|+...... ....   .++++  .|.      .+..+     .++|+|||+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~---~~~~~--~d~~~~~~~~~~~~~~~~~~~~d~Vih~   75 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL---VDLDI--ADYMDKEDFLAQIMAGDDFGDIEAIFHE   75 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-HHhh---hhhhh--hhhhhHHHHHHHHhcccccCCccEEEEC
Confidence            7999999999999999999999977666554322111 0000   01111  121      11111     369999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~  266 (290)
                      ||.....  ..++..++++|+.++.+++++|++.++++|++||.++||.....+.+|+. ..|.++|+.+|...|++++.
T Consensus        76 A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  153 (308)
T PRK11150         76 GACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQ  153 (308)
T ss_pred             ceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            9964432  33556689999999999999999988899999999999976555666654 35678999999999999999


Q ss_pred             HHHHhCCCeeEEEeeeeeccc
Q 022900          267 FISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +...++++++++|++++.+.+
T Consensus       154 ~~~~~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        154 ILPEANSQICGFRYFNVYGPR  174 (308)
T ss_pred             HHHHcCCCEEEEeeeeecCCC
Confidence            988889999999999988754

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.88  E-value=1e-21  Score=177.48  Aligned_cols=165  Identities=30%  Similarity=0.336  Sum_probs=124.8

Q ss_pred             EEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcccCCC
Q 022900          120 VVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPAS  192 (290)
Q Consensus       120 lVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~Ag~~~  192 (290)
                      +||||+||||++|+++|+++|  ++|.++++.......  .........+++.+|++++     .+.++|+|||+|++..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            699999999999999999999  689998875433221  1111223344899999876     4678999999999753


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCC-CCC---CCCCCC---CCCChhhhhHHHHHHHH
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-QHP---QKETYW---GNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~-~~~---~~E~~~---~~~~py~~~k~~~e~~~  264 (290)
                      .. .....+.++++|+.||.|++++|++.++ ++||+||.++++.+. ..+   .+|+.+   ...++|+.+|..+|.++
T Consensus        79 ~~-~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V  157 (280)
T PF01073_consen   79 PW-GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAV  157 (280)
T ss_pred             cc-CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHH
Confidence            32 2456788999999999999999999996 999999999987622 222   244443   24568999999999988


Q ss_pred             HHHHH---Hh--CCCeeEEEeeeeeccc
Q 022900          265 LVFIS---QF--RPSRKACRFFILLYRN  287 (290)
Q Consensus       265 ~~~~~---~~--gl~~~ilR~~~lr~~~  287 (290)
                      ..+..   +.  .+..+++||..+.+.+
T Consensus       158 ~~a~~~~~~~g~~l~t~~lRP~~IyGp~  185 (280)
T PF01073_consen  158 LEANGSELKNGGRLRTCALRPAGIYGPG  185 (280)
T ss_pred             HhhcccccccccceeEEEEeccEEeCcc
Confidence            88766   22  4899999998877654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.88  E-value=1.9e-21  Score=175.91  Aligned_cols=170  Identities=20%  Similarity=0.218  Sum_probs=134.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh--hhhcccC-CCCeEEEEccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFG-NPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      .+++|+||||+||||++|++.|+++||+|++..|+.+..+.  .+..+.+ ..+...+.+|++++.     +.+||.|+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            57899999999999999999999999999999998655322  2333322 346999999998874     568999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCcccc-----CCCCCCCCCCCCCCCC-------h
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYG-----DPLQHPQKETYWGNVN-------P  252 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg-----~~~~~~~~E~~~~~~~-------p  252 (290)
                      .|.+....... ...+.++.++.||.|++++|++..  +|+|++||.+.-.     ......++|+.|.+.+       -
T Consensus        85 ~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~  163 (327)
T KOG1502|consen   85 TASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW  163 (327)
T ss_pred             eCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence            99864433222 345799999999999999999988  4999999987432     2344578999986654       4


Q ss_pred             hhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          253 IGTYFFSFSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      |..+|.-+|..+..++++.+++.+.+=|+.+-+
T Consensus       164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~G  196 (327)
T KOG1502|consen  164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFG  196 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEecCCceEC
Confidence            888888899999999999899999887776654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.88  E-value=2.2e-21  Score=194.82  Aligned_cols=174  Identities=25%  Similarity=0.346  Sum_probs=136.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCC-CchhhhhcccCCCCeEEEEcccccccc-------cCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~  183 (290)
                      .++|+|+||||+||||+++++.|+++  |++|++++|... .....+.......+++++.+|+.+...       .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            45689999999999999999999998  679999987421 111111111123478999999987532       46999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCC---CCCC-CCCCCChhhhhH
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHP---QKET-YWGNVNPIGTYF  257 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~---~~E~-~~~~~~py~~~k  257 (290)
                      |||+|+.........++...+++|+.||.+++++|++.+ . +||++||.++||.....+   ..|+ ...+.++|+.+|
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK  163 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK  163 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence            999999765444445667889999999999999999877 3 999999999999765432   2343 235678999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          258 FSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       258 ~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ...|.++..+.++++++++++|++++.+.+
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~  193 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPN  193 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcC
Confidence            999999999998899999999999998765

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.87  E-value=4.5e-21  Score=176.67  Aligned_cols=162  Identities=22%  Similarity=0.294  Sum_probs=127.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      .++|+|+||||+||||++++++|+++|  ++|++++|+..... .+.......++.++.+|+.+..     +.++|+|||
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih   80 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW-EMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVH   80 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH-HHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence            357899999999999999999999986  78999987543221 1222222356889999998864     356999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~  265 (290)
                      |||.......+.++.+++++|+.|+.+++++|.+.+. +||++||...+             .|.++|+.+|...|.+++
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~-------------~p~~~Y~~sK~~~E~l~~  147 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA-------------NPINLYGATKLASDKLFV  147 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-------------CCCCHHHHHHHHHHHHHH
Confidence            9997544444567788999999999999999999885 99999996322             245789999999999887


Q ss_pred             HHH---HHhCCCeeEEEeeeeecccCC
Q 022900          266 VFI---SQFRPSRKACRFFILLYRNGA  289 (290)
Q Consensus       266 ~~~---~~~gl~~~ilR~~~lr~~~~~  289 (290)
                      .+.   ..+|++++++|++++.+.+|+
T Consensus       148 ~~~~~~~~~gi~~~~lR~g~v~G~~~~  174 (324)
T TIGR03589       148 AANNISGSKGTRFSVVRYGNVVGSRGS  174 (324)
T ss_pred             HHHhhccccCcEEEEEeecceeCCCCC
Confidence            754   357999999999999886654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.87  E-value=4.2e-21  Score=178.14  Aligned_cols=170  Identities=26%  Similarity=0.345  Sum_probs=129.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCCC-CchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~  187 (290)
                      |+|+||||+||||.+++++|+++|+. |+++++... ...+.........+++++.+|+++..     +.  ++|+||||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999975 555665321 22222222212346788899998763     22  48999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc---------C-CeEEEEcCCccccCCCC----------CCCCCCC-
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---------G-ARFLLTSTSEVYGDPLQ----------HPQKETY-  246 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~-~riV~vSS~~vyg~~~~----------~~~~E~~-  246 (290)
                      ||.........+++.++++|+.|+.+++++|++.         + .++|++||.++||....          .++.|+. 
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            9975433344567889999999999999999863         3 38999999999986321          1244543 


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ..+.++|+.+|...|.+++.+.+.++++++++|+.++.+.
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp  200 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP  200 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCC
Confidence            3567899999999999999999999999999999988764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.86  E-value=1.6e-20  Score=170.52  Aligned_cols=169  Identities=28%  Similarity=0.361  Sum_probs=131.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCC-CchhhhhcccCCCCeEEEEccccccc-----ccC--CCEEEEc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEPL-----LLE--VDQIYHL  187 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~--vD~vih~  187 (290)
                      +|+||||+|+||.+++++|+++|  ++|++++|... ...+.........+++++.+|+.++.     +.+  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            48999999999999999999987  68998876421 12222222222346888999998763     333  8999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCCCC-CCCCCCC-CCCChhhhhHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQH-PQKETYW-GNVNPIGTYFFSFSLI  263 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~~~-~~~E~~~-~~~~py~~~k~~~e~~  263 (290)
                      |+.........++..++++|+.++.+++++|++.+  +++|++||.++||..... +..|... .+.++|+..|...|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            99754444455677889999999999999998864  499999999999865432 4666543 4567899999999999


Q ss_pred             HHHHHHHhCCCeeEEEeeeeecc
Q 022900          264 FLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       264 ~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ++.+..+++++++++|++++.+.
T Consensus       161 ~~~~~~~~~~~~~i~R~~~i~G~  183 (317)
T TIGR01181       161 VRAYHRTYGLPALITRCSNNYGP  183 (317)
T ss_pred             HHHHHHHhCCCeEEEEeccccCC
Confidence            99999889999999999988654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.86  E-value=2.5e-21  Score=171.90  Aligned_cols=162  Identities=25%  Similarity=0.261  Sum_probs=106.6

Q ss_pred             EEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCC--chhhhhccc------------CCCCeEEEEcccccccc------
Q 022900          121 VTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTG--RKENVMHHF------------GNPNFELIRHDVVEPLL------  178 (290)
Q Consensus       121 VTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~--~~~~~~~~~------------~~~~v~~~~~D~~~~~~------  178 (290)
                      |||||||+|.+|+.+|++++.  +|+++.|....  ..+.+...+            ...+++++.+|++++.+      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  99999996432  111121111            15789999999998764      


Q ss_pred             -----cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCccccCCCCCC------CCCC-
Q 022900          179 -----LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHP------QKET-  245 (290)
Q Consensus       179 -----~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~vyg~~~~~~------~~E~-  245 (290)
                           .++|+|||||+.   ..+..++.+..++|+.||.++++.|.+.. ++|+|+||+.+.+......      ..|. 
T Consensus        81 ~~~L~~~v~~IiH~Aa~---v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~  157 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAAS---VNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDD  157 (249)
T ss_dssp             HHHHHHH--EEEE--SS----SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--E
T ss_pred             hhccccccceeeecchh---hhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCccccccccccccc
Confidence                 259999999985   44555777789999999999999998655 4999999965655443221      1111 


Q ss_pred             ---CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          246 ---YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       246 ---~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                         .....++|..+||.+|.++..+.++.|++++|+||+++-.
T Consensus       158 ~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  158 LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence               1234568999999999999999999999999999999876

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.85  E-value=2.6e-20  Score=169.53  Aligned_cols=170  Identities=16%  Similarity=0.146  Sum_probs=129.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch--hhhhccc-CCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHF-GNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~-~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ++++|+||||+||||++++++|+++|++|++++|+.....  +.+.... ...++.++.+|+++..     +.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4578999999999999999999999999999988532211  1112211 1246888999998763     457999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEcCCccc--cC---CCCCCCCCCCCCCCC-------h
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G-ARFLLTSTSEVY--GD---PLQHPQKETYWGNVN-------P  252 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~-~riV~vSS~~vy--g~---~~~~~~~E~~~~~~~-------p  252 (290)
                      .++....  ...++++++++|+.|+.+++++|.+. + ++||++||.+.+  +.   ....+++|+.|.+..       +
T Consensus        85 ~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  162 (297)
T PLN02583         85 CFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW  162 (297)
T ss_pred             eCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence            8764321  12246788999999999999999886 3 499999998764  31   123467887765332       6


Q ss_pred             hhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          253 IGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      |+.+|...|..+..+.++++++++++||+++.+.
T Consensus       163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp  196 (297)
T PLN02583        163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGP  196 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCC
Confidence            9999999999999998888999999999998764

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.85  E-value=3e-20  Score=169.42  Aligned_cols=169  Identities=30%  Similarity=0.453  Sum_probs=133.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEcccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLACP  190 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~Ag~  190 (290)
                      +|+||||+|+||.+++++|+++|++|++++|......+.........+++++.+|+.++..       .++|+||||||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            4899999999999999999999999998876433322222221111257788899987642       369999999997


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ........++.+.++.|+.++.+++++|.+.+. ++|++||.++||.....+++|+.+ .+.++|+..|...|.+++.+.
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence            644444556777899999999999999998885 999999999998766666776653 456789999999999999988


Q ss_pred             HH-hCCCeeEEEeeeeecc
Q 022900          269 SQ-FRPSRKACRFFILLYR  286 (290)
Q Consensus       269 ~~-~gl~~~ilR~~~lr~~  286 (290)
                      ++ .+++++++|++++.+.
T Consensus       161 ~~~~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       161 KADPGLSYVILRYFNVAGA  179 (328)
T ss_pred             HhccCCCEEEEecCcccCC
Confidence            77 7999999999887664

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.85  E-value=2.3e-20  Score=174.89  Aligned_cols=173  Identities=15%  Similarity=0.122  Sum_probs=130.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-------CCCCeEEEEccccccc-----ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-------GNPNFELIRHDVVEPL-----LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~v~~~~~D~~~~~-----~~~v  181 (290)
                      .++|+|+||||+||||.+++++|+++|++|+++.|+..... .+....       ...++.++.+|+++..     +.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            56889999999999999999999999999998877532211 111110       0135788999998764     4579


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCC--ccccCC--CC--CCCCCCCCC-----
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTS--EVYGDP--LQ--HPQKETYWG-----  248 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~-riV~vSS~--~vyg~~--~~--~~~~E~~~~-----  248 (290)
                      |.|||+|+...+...........++|+.++.+++++|++. ++ ++|++||.  .+||..  ..  ..++|+.|.     
T Consensus       130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~  209 (367)
T PLN02686        130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC  209 (367)
T ss_pred             cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence            9999999975433322222456788999999999999885 54 99999996  478742  22  235665432     


Q ss_pred             --CCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          249 --NVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       249 --~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                        +..+|+.+|...|.++..+.+.+|++++++||+++.+.+
T Consensus       210 ~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        210 RDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG  250 (367)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence              345799999999999999988899999999999998763

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.85  E-value=1.5e-20  Score=169.34  Aligned_cols=146  Identities=25%  Similarity=0.298  Sum_probs=116.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----ccc--CCCEEEEcccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLACP  190 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~--~vD~vih~Ag~  190 (290)
                      +|+||||+||||++++++|+++|++|++++|.                    .+|+.+.     .+.  ++|+|||+||.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence            48999999999999999999999999999873                    1333332     233  46999999997


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      ........++..++++|+.++.+++++|++.+.++|++||.++|+.....++.|+. ..+.++|+.+|...|..++.+  
T Consensus        61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~--  138 (287)
T TIGR01214        61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA--  138 (287)
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh--
Confidence            54433445677889999999999999999887899999999999876666777765 345678889898888776654  


Q ss_pred             HhCCCeeEEEeeeeeccc
Q 022900          270 QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~~  287 (290)
                        +.+++++|++++.+..
T Consensus       139 --~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       139 --GPNALIVRTSWLYGGG  154 (287)
T ss_pred             --CCCeEEEEeeecccCC
Confidence              7899999999987653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.85  E-value=2e-20  Score=169.69  Aligned_cols=149  Identities=19%  Similarity=0.154  Sum_probs=120.0

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----c--cCCCEEEEcccCCC
Q 022900          120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L--LEVDQIYHLACPAS  192 (290)
Q Consensus       120 lVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~--~~vD~vih~Ag~~~  192 (290)
                      +||||+||||++|++.|+++|++|+++.+..                   .+|+++..     +  .++|+|||||+...
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~   61 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAAAKVG   61 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence            6999999999999999999999887664321                   24555442     2  25899999999754


Q ss_pred             CC-CCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-----CCCC-hhhhhHHHHHHHH
Q 022900          193 PV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-----GNVN-PIGTYFFSFSLIF  264 (290)
Q Consensus       193 ~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-----~~~~-py~~~k~~~e~~~  264 (290)
                      .. ....++...+++|+.++.+++++|++.+. ++|++||+.|||.....+++|+.+     .+.+ +|+.+|...|.++
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~  141 (306)
T PLN02725         62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC  141 (306)
T ss_pred             ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence            22 23456778899999999999999999885 899999999999776778888752     2333 4999999999999


Q ss_pred             HHHHHHhCCCeeEEEeeeeeccc
Q 022900          265 LVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +.+.+.++++++++|++++.+.+
T Consensus       142 ~~~~~~~~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        142 QAYRIQYGWDAISGMPTNLYGPH  164 (306)
T ss_pred             HHHHHHhCCCEEEEEecceeCCC
Confidence            99998899999999999987764

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=1.8e-20  Score=171.06  Aligned_cols=165  Identities=21%  Similarity=0.170  Sum_probs=130.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc--hhhhhcc---------cCCCCeEEEEccccccccc-----
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR--KENVMHH---------FGNPNFELIRHDVVEPLLL-----  179 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~--~~~~~~~---------~~~~~v~~~~~D~~~~~~~-----  179 (290)
                      ++|++||||||+|.+++.+|+.+-. +|+|+.|.....  .+.+...         ....+++++.+|+.++.++     
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            4799999999999999999999854 999999854311  1111111         1346899999999877543     


Q ss_pred             ------CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCC-------
Q 022900          180 ------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKET-------  245 (290)
Q Consensus       180 ------~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~-------  245 (290)
                            .+|.|||||+.   .++...+.+....||.||..++++|..... .+.|+||++|+....++...++       
T Consensus        81 ~~~La~~vD~I~H~gA~---Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAAL---VNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchh---hcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence                  49999999986   677888999999999999999999988764 6999999999765433322211       


Q ss_pred             ---CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          246 ---YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       246 ---~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                         ......+|+.+||.+|.++....++ |++++|+|++++-.
T Consensus       158 ~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~g  199 (382)
T COG3320         158 RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITG  199 (382)
T ss_pred             ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeec
Confidence               1234579999999999999999998 99999999998754

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.85  E-value=6e-20  Score=167.93  Aligned_cols=163  Identities=23%  Similarity=0.292  Sum_probs=131.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~  191 (290)
                      |+|+||||+||||.++++.|+++|++|++++|+......     .....++++.+|+.+..     +.++|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-----LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-----cccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            479999999999999999999999999999986432211     12236888899998753     45799999999853


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccC-CCCCCCCCCCCCC----CChhhhhHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGD-PLQHPQKETYWGN----VNPIGTYFFSFSLIFL  265 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~-~~~~~~~E~~~~~----~~py~~~k~~~e~~~~  265 (290)
                        ..+..+++..+++|+.++.+++++|.+.+. +||++||.++||. ....+.+|+....    ..+|+.+|...|.+++
T Consensus        76 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~  153 (328)
T TIGR03466        76 --RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAAL  153 (328)
T ss_pred             --ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHH
Confidence              223456788999999999999999998875 9999999999985 3344666665322    3579999999999999


Q ss_pred             HHHHHhCCCeeEEEeeeeecc
Q 022900          266 VFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      .+..+++++++++|++++.+.
T Consensus       154 ~~~~~~~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       154 EMAAEKGLPVVIVNPSTPIGP  174 (328)
T ss_pred             HHHHhcCCCEEEEeCCccCCC
Confidence            999888999999999988654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.84  E-value=6.2e-21  Score=170.93  Aligned_cols=159  Identities=26%  Similarity=0.296  Sum_probs=117.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcc---cCCCCeE----EEEccccccc-----cc--CCCE
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH---FGNPNFE----LIRHDVVEPL-----LL--EVDQ  183 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~v~----~~~~D~~~~~-----~~--~vD~  183 (290)
                      |+||||+|.||+.|+++|++.+. ++++++++....-+...++   ..+.++.    .+-+|+.|..     +.  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999985 7999998643333222222   2333443    4578997763     34  7999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHH
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSL  262 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~  262 (290)
                      |||.|+.-..+..+++|.+.+++|+.||.|++++|.+.++ ++|++||.-..             .|.+-||.+|.-+|.
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv-------------~PtnvmGatKrlaE~  147 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV-------------NPTNVMGATKRLAEK  147 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS-------------S--SHHHHHHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC-------------CCCcHHHHHHHHHHH
Confidence            9999998666668999999999999999999999999996 99999996443             377899999999999


Q ss_pred             HHHHHHHHh---CCCeeEEEeeeeecccCCC
Q 022900          263 IFLVFISQF---RPSRKACRFFILLYRNGAL  290 (290)
Q Consensus       263 ~~~~~~~~~---gl~~~ilR~~~lr~~~~~~  290 (290)
                      ++..+....   +..++++||+||-+.+||+
T Consensus       148 l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV  178 (293)
T PF02719_consen  148 LVQAANQYSGNSDTKFSSVRFGNVLGSRGSV  178 (293)
T ss_dssp             HHHHHCCTSSSS--EEEEEEE-EETTGTTSC
T ss_pred             HHHHHhhhCCCCCcEEEEEEecceecCCCcH
Confidence            999888765   6889999999999999995

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.83  E-value=1.8e-20  Score=164.23  Aligned_cols=172  Identities=22%  Similarity=0.341  Sum_probs=144.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCC-CCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih  186 (290)
                      ++++||||+||||++.+..+...  .++.+.++... ......+......++..++.+|+.++..       .++|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            78999999999999999999987  45667666531 2223444445467889999999988743       36999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCCCC-CCC-CCCCChhhhhHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQK-ETY-WGNVNPIGTYFFSFSL  262 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~~~-E~~-~~~~~py~~~k~~~e~  262 (290)
                      .|+.+....+--++....+.|+.++..++++++..|.  +||++||..|||+.++.... |.. +.|.+||+.+|.++|.
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~  166 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM  166 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence            9998766666677788889999999999999999873  89999999999998887766 654 6899999999999999


Q ss_pred             HHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          263 IFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      ++++|-.+|+++++++|.+|+.++|-
T Consensus       167 ~v~Sy~~sy~lpvv~~R~nnVYGP~q  192 (331)
T KOG0747|consen  167 LVRSYGRSYGLPVVTTRMNNVYGPNQ  192 (331)
T ss_pred             HHHHHhhccCCcEEEEeccCccCCCc
Confidence            99999999999999999999988763

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.83  E-value=6.8e-20  Score=174.38  Aligned_cols=166  Identities=24%  Similarity=0.288  Sum_probs=138.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchh---hhhcccCCCCeEEEEccccccc-----ccC--
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE---NVMHHFGNPNFELIRHDVVEPL-----LLE--  180 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~---~~~~~~~~~~v~~~~~D~~~~~-----~~~--  180 (290)
                      ...++|+|+||||+|.||+++++++++.+. ++++++|+.....+   ++.+.....+..++-+|+.|.+     +.+  
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k  325 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK  325 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence            446789999999999999999999999876 67778775433322   2222223467888889998774     344  


Q ss_pred             CCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHH
Q 022900          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFS  259 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~  259 (290)
                      +|+|+|.|+.-..+..++||.+.+++|+.||.|++++|.+.++ ++|++||.-.-             +|+|-+|.+|..
T Consensus       326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV-------------~PtNvmGaTKr~  392 (588)
T COG1086         326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV-------------NPTNVMGATKRL  392 (588)
T ss_pred             CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc-------------CCchHhhHHHHH
Confidence            9999999998777789999999999999999999999999996 99999996322             378899999999


Q ss_pred             HHHHHHHHHHHhC---CCeeEEEeeeeecccCCC
Q 022900          260 FSLIFLVFISQFR---PSRKACRFFILLYRNGAL  290 (290)
Q Consensus       260 ~e~~~~~~~~~~g---l~~~ilR~~~lr~~~~~~  290 (290)
                      +|.+++.+.++..   ..++++||+||-+.+||.
T Consensus       393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV  426 (588)
T COG1086         393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV  426 (588)
T ss_pred             HHHHHHHHhhccCCCCcEEEEEEecceecCCCCC
Confidence            9999999988543   899999999999999984

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.83  E-value=2.4e-19  Score=163.25  Aligned_cols=160  Identities=24%  Similarity=0.328  Sum_probs=119.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc---------ccCCCEEEEcc
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL---------LLEVDQIYHLA  188 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---------~~~vD~vih~A  188 (290)
                      |+||||+||||.++++.|.++|+ .|++++|.....  .....    ....+..|+.++.         +.++|+|||||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence            68999999999999999999998 788887643211  11111    0123344554332         24799999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-C-CCCChhhhhHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-W-GNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~-~~~~py~~~k~~~e~~~~~  266 (290)
                      +...  ....++..++++|+.|+.+++++|.+.+++||++||+++||.... +..|+. . .+.++|+.+|...|.+++.
T Consensus        75 ~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~~  151 (314)
T TIGR02197        75 ACSD--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVRR  151 (314)
T ss_pred             cccC--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHHH
Confidence            9643  234567888999999999999999998889999999999997643 444443 2 3678899999999998887


Q ss_pred             HHH--HhCCCeeEEEeeeeeccc
Q 022900          267 FIS--QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       267 ~~~--~~gl~~~ilR~~~lr~~~  287 (290)
                      +..  ..+++++++|++++.+.+
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       152 RVLPEALSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             HhHhhccCCceEEEEEeeccCCC
Confidence            653  346789999999988765

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02996 fatty acyl-CoA reductase

Probab=99.82  E-value=2.8e-19  Score=173.37  Aligned_cols=167  Identities=19%  Similarity=0.195  Sum_probs=125.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchh--hhh-ccc-------------------CCCCeEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKE--NVM-HHF-------------------GNPNFEL  168 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~--~~~-~~~-------------------~~~~v~~  168 (290)
                      .++|+|+|||||||||++|+++|++.+.   +|+++.|.......  .+. ++.                   ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            6789999999999999999999998643   68999986532211  110 110                   0157899


Q ss_pred             EEccccccc------------ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCCccc
Q 022900          169 IRHDVVEPL------------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY  234 (290)
Q Consensus       169 ~~~D~~~~~------------~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~-riV~vSS~~vy  234 (290)
                      +.+|++++.            +.++|+|||+|+...   ...++...+++|+.||.+++++|++. +. ++|++||.+||
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            999997432            246999999999643   34578889999999999999999886 43 89999999999


Q ss_pred             cCCCC----CCCC--CC----------------------------------------------CCCCCChhhhhHHHHHH
Q 022900          235 GDPLQ----HPQK--ET----------------------------------------------YWGNVNPIGTYFFSFSL  262 (290)
Q Consensus       235 g~~~~----~~~~--E~----------------------------------------------~~~~~~py~~~k~~~e~  262 (290)
                      |...+    .++.  ++                                              ..+..++|+.+|..+|.
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            86432    1111  00                                              01235779999999999


Q ss_pred             HHHHHHHHhCCCeeEEEeeeeec
Q 022900          263 IFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      ++..+..  +++++++||+++-+
T Consensus       246 lv~~~~~--~lpv~i~RP~~V~G  266 (491)
T PLN02996        246 LLGNFKE--NLPLVIIRPTMITS  266 (491)
T ss_pred             HHHHhcC--CCCEEEECCCEecc
Confidence            9987753  89999999999955

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.82  E-value=4.4e-20  Score=167.34  Aligned_cols=148  Identities=26%  Similarity=0.289  Sum_probs=110.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----c--cCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L--LEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~--~~vD~vih~Ag  189 (290)
                      |+|+||||+|+||.+|.+.|.++|++|+++.|.                    ..|+.+..     +  .++|+||||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa   60 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCAA   60 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence            689999999999999999999999999999763                    34554432     1  25899999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      .+.+..++.+++..+++|+.++.++.++|.+.+.++||+||..||+.....++.|+. ..|.+.||.+|...|..++.  
T Consensus        61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~--  138 (286)
T PF04321_consen   61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA--  138 (286)
T ss_dssp             ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHH--
T ss_pred             eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHH--
Confidence            887777888999999999999999999999999999999999999877777787775 46677788888877776655  


Q ss_pred             HHhCCCeeEEEeeeeecccC
Q 022900          269 SQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~~  288 (290)
                        ..-+..|+|++.+-..++
T Consensus       139 --~~~~~~IlR~~~~~g~~~  156 (286)
T PF04321_consen  139 --ACPNALILRTSWVYGPSG  156 (286)
T ss_dssp             --H-SSEEEEEE-SEESSSS
T ss_pred             --hcCCEEEEecceecccCC
Confidence              233799999998866533

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.82  E-value=1.6e-19  Score=166.14  Aligned_cols=172  Identities=24%  Similarity=0.228  Sum_probs=134.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcc-cCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ++.+++||||+||+|++|+.+|.+++  .+|.++|............. ....++.++.+|+.+..     +.++ .|||
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            56799999999999999999999998  68999987543211111111 13578999999998764     4567 8999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC-CCCCCCCCCCC---ChhhhhHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-HPQKETYWGNV---NPIGTYFFSFS  261 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~-~~~~E~~~~~~---~py~~~k~~~e  261 (290)
                      ||+...+.....+++..+++|+.||.+++++|++.++ ++|++||.+|+..+.. .-.+|+.+.|.   ++|+.+|..+|
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence            9987666666677899999999999999999999996 9999999998654444 22344443333   58999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .++.......++..+++|+..+.+..
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IYGpg  187 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIYGPG  187 (361)
T ss_pred             HHHHHhcCCCCeeEEEEccccccCCC
Confidence            99888876668899999999887654

>PLN02778 3,5-epimerase/4-reductase

Probab=99.82  E-value=4.3e-19  Score=161.75  Aligned_cols=150  Identities=15%  Similarity=0.138  Sum_probs=108.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~  194 (290)
                      ..|+|+||||+||||++|++.|+++|++|+........ .+.            +..|+.+   .++|+|||+||.....
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~-~~~------------v~~~l~~---~~~D~ViH~Aa~~~~~   71 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLEN-RAS------------LEADIDA---VKPTHVFNAAGVTGRP   71 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCC-HHH------------HHHHHHh---cCCCEEEECCcccCCC
Confidence            34789999999999999999999999999764322111 111            1112111   2689999999986533


Q ss_pred             C---CCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCC------CCCCCCCC-CCC-CChhhhhHHHHHHH
Q 022900          195 H---YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPL------QHPQKETY-WGN-VNPIGTYFFSFSLI  263 (290)
Q Consensus       195 ~---~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~------~~~~~E~~-~~~-~~py~~~k~~~e~~  263 (290)
                      .   ++.++.+++++|+.|+.+++++|++.+.+++++||.++|+...      ..++.|+. +.+ .++|+.+|...|.+
T Consensus        72 ~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~  151 (298)
T PLN02778         72 NVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEEL  151 (298)
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHH
Confidence            2   4567889999999999999999999988888889889987533      22356543 333 47999999999999


Q ss_pred             HHHHHHHhCCCeeEEEeeeeec
Q 022900          264 FLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       264 ~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      +..|.+     ..++|+...+.
T Consensus       152 ~~~y~~-----~~~lr~~~~~~  168 (298)
T PLN02778        152 LKNYEN-----VCTLRVRMPIS  168 (298)
T ss_pred             HHHhhc-----cEEeeecccCC
Confidence            988764     44566655443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.80  E-value=1.4e-18  Score=160.58  Aligned_cols=165  Identities=21%  Similarity=0.218  Sum_probs=124.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCch--hhhhccc--------C-C-CCeEEEEccccccc------
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRK--ENVMHHF--------G-N-PNFELIRHDVVEPL------  177 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~--~~~~~~~--------~-~-~~v~~~~~D~~~~~------  177 (290)
                      +|+|||||||||.+++++|+++|  ++|+++.|......  +.+....        . . .+++++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  67999998643211  1111000        0 1 47899999987653      


Q ss_pred             -----ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC----
Q 022900          178 -----LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW----  247 (290)
Q Consensus       178 -----~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~----  247 (290)
                           ..++|+|||||+...   ....+...+++|+.|+.+++++|.+.+. +|+++||.++|+.....+..|+..    
T Consensus        81 ~~~~~~~~~d~vih~a~~~~---~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~  157 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVN---WVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTP  157 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEec---cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccc
Confidence                 246999999999642   3345677889999999999999998875 699999999998644333223221    


Q ss_pred             --CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          248 --GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       248 --~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                        ...++|+.+|+..|.++..+.+. |++++++|++++.+.
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       158 PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGN  197 (367)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeec
Confidence              22457999999999998887765 999999999999864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.80  E-value=1.4e-18  Score=150.62  Aligned_cols=158  Identities=15%  Similarity=0.017  Sum_probs=121.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|.++|||||++||.++++.|++.|++|++..|+.++..+...++.. ..+..+..|++|..            +.++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            4568999999999999999999999999999999876655555554422 57899999999873            3469


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCc-cccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~  251 (290)
                      |++|||||......    ..++|+.++++|+.|.++.+++..    +++ .+||++||++ .|..+..           +
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~-----------~  151 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG-----------A  151 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC-----------c
Confidence            99999999865422    224678899999999999999854    333 3999999986 2322211           4


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      -|+.+|+....+.+.++++.   +++++.+-|+.+
T Consensus       152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v  186 (246)
T COG4221         152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLV  186 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCcee
Confidence            69999999888887777764   666776666554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.8e-18  Score=173.06  Aligned_cols=161  Identities=27%  Similarity=0.321  Sum_probs=123.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHH--HCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEccccccc----------ccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLI--ARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL----------LLEV  181 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~----------~~~v  181 (290)
                      |+|+|||||||||++++++|+  ++|++|++++|...  .......   ....+++++.+|++++.          +.++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~   78 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS--LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDI   78 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch--HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCC
Confidence            479999999999999999999  57999999998532  1211111   12257899999998742          2579


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC----CCCChhhhh
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW----GNVNPIGTY  256 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~----~~~~py~~~  256 (290)
                      |+||||||...   ...++....++|+.|+.+++++|++.+. +||++||.++||.... +..|+.+    .+.++|+.+
T Consensus        79 D~Vih~Aa~~~---~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~s  154 (657)
T PRK07201         79 DHVVHLAAIYD---LTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRT  154 (657)
T ss_pred             CEEEECceeec---CCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHH
Confidence            99999999643   2345667889999999999999999874 9999999999986433 3344332    234689999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          257 FFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       257 k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      |+..|.++..   ..+++++++|++++.+.
T Consensus       155 K~~~E~~~~~---~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        155 KFEAEKLVRE---ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             HHHHHHHHHH---cCCCcEEEEcCCeeeec
Confidence            9999887753   46899999999998764

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=9.3e-19  Score=156.10  Aligned_cols=151  Identities=23%  Similarity=0.229  Sum_probs=122.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccccc--CCCEEEEcccCCCCCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPVH  195 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~--~vD~vih~Ag~~~~~~  195 (290)
                      +|+|||++|.+|.+|++.|. .+.+|+.+++.               ++++.+.|-..+.+.  ++|+|||+|+++....
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------------~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~   65 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRA---------------ELDITDPDAVLEVIRETRPDVVINAAAYTAVDK   65 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCc---------------cccccChHHHHHHHHhhCCCEEEECcccccccc
Confidence            49999999999999999998 66899998762               222222332222232  5899999999988888


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHHHHhCCC
Q 022900          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFISQFRPS  274 (290)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~~~~gl~  274 (290)
                      .+.+++..+.+|..|+.|+.++|.+.|.++|++||.+||......++.|++ ..|.+-||.+|+..|..+..+    +-+
T Consensus        66 aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~----~~~  141 (281)
T COG1091          66 AESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA----GPR  141 (281)
T ss_pred             ccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh----CCC
Confidence            999999999999999999999999999999999999999888888888876 466677888888777755543    467


Q ss_pred             eeEEEeeeeecccC
Q 022900          275 RKACRFFILLYRNG  288 (290)
Q Consensus       275 ~~ilR~~~lr~~~~  288 (290)
                      ..|+|.+-+....|
T Consensus       142 ~~I~Rtswv~g~~g  155 (281)
T COG1091         142 HLILRTSWVYGEYG  155 (281)
T ss_pred             EEEEEeeeeecCCC
Confidence            89999998877655

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.78  E-value=3.7e-18  Score=156.84  Aligned_cols=171  Identities=13%  Similarity=0.057  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccccc------------cC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL------------LE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~------------~~  180 (290)
                      .++|+|+||||+||||.++++.|+++|++|++++|+.....+....+. ...++.++.+|+.+...            .+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999999986433333222221 23468889999977631            25


Q ss_pred             CCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEcCCccccCCCC----CCCC-
Q 022900          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDPLQ----HPQK-  243 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~---~riV~vSS~~vyg~~~~----~~~~-  243 (290)
                      +|+||||||...+..     ..++++.++++|+.|+.++++++.+    .+   .|||++||.+.+.....    .+.. 
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            999999999753321     2234677899999999999888753    22   39999999876431100    0000 


Q ss_pred             --------------------CCCCCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeeee
Q 022900          244 --------------------ETYWGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFILL  284 (290)
Q Consensus       244 --------------------E~~~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~lr  284 (290)
                                          +....+..+|+.+|...+.+++.+.+++    |+.+..++|+++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  228 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVA  228 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCccc
Confidence                                1112345689999998878777777765    7889999999874

>PRK06194 hypothetical protein; Provisional

Probab=99.78  E-value=3.9e-18  Score=153.67  Aligned_cols=160  Identities=13%  Similarity=0.025  Sum_probs=118.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++++||||+||||.+++++|+++|++|++++|+.....+...++.. ..++.++.+|+++..            +.+
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999864433333332222 346888999998763            235


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-------CeEEEEcCCccccCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-------ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-------~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      +|+||||||........    .+++.++++|+.|+.++++++    .+.+       .+||++||.+.+....       
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------  156 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP-------  156 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-------
Confidence            89999999986543322    345667999999999988874    3332       3799999987664221       


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                         ...+|+.+|...+.+++.+..+++.....+|.+++
T Consensus       157 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v  191 (287)
T PRK06194        157 ---AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVL  191 (287)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE
Confidence               23579999999999999999887766555665554

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.78  E-value=4.2e-18  Score=153.25  Aligned_cols=164  Identities=16%  Similarity=0.152  Sum_probs=112.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC-C-
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH-Y-  196 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~-~-  196 (290)
                      |+||||+||||.++++.|+++|++|++++|+.........     ..+.....+...+.+.++|+|||+||...... + 
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~   75 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EGYKPWAPLAESEALEGADAVINLAGEPIADKRWT   75 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----eeeecccccchhhhcCCCCEEEECCCCCcccccCC
Confidence            6899999999999999999999999999987544322110     11111112333445678999999999643211 1 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHHHHhC
Q 022900          197 KFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFISQFR  272 (290)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~a~~~~~~---riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~~~~g  272 (290)
                      ...+..++++|+.++.+++++|++.+.   ++|++||.++||.....++.|+. ..+.+.++..+...|..+..+ ++.+
T Consensus        76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~-~~~~  154 (292)
T TIGR01777        76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAA-EDLG  154 (292)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhc-hhcC
Confidence            223466889999999999999999874   46666667789977667777776 223333443343344544433 3468


Q ss_pred             CCeeEEEeeeeecccC
Q 022900          273 PSRKACRFFILLYRNG  288 (290)
Q Consensus       273 l~~~ilR~~~lr~~~~  288 (290)
                      ++++++|++++-+.++
T Consensus       155 ~~~~ilR~~~v~G~~~  170 (292)
T TIGR01777       155 TRVVLLRTGIVLGPKG  170 (292)
T ss_pred             CceEEEeeeeEECCCc
Confidence            9999999999977643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.78  E-value=1.4e-18  Score=152.48  Aligned_cols=167  Identities=25%  Similarity=0.290  Sum_probs=143.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh-----hhcccCCCCeEEEEccccccc-------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-----VMHHFGNPNFELIRHDVVEPL-------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~v~~~~~D~~~~~-------~~~vD~  183 (290)
                      +|+.+|||-||+-|..|++.|+++|+.|.++.|........     ...+..+.++.++.+|++|..       ..++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            57999999999999999999999999999998874332222     122335567999999999874       236899


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHH
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFS  259 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~  259 (290)
                      |+|+||++....+.++|+.+.+++-.|+.+++++.+..+   .||...||+..||.....|++|.. ..|.+||++.|.+
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            999999987777888999999999999999999998765   389999999999999999998876 4789999999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEeee
Q 022900          260 FSLIFLVFISQFRPSRKACRFFI  282 (290)
Q Consensus       260 ~e~~~~~~~~~~gl~~~ilR~~~  282 (290)
                      +-.+...|.+.||+-.|.-++||
T Consensus       162 a~W~tvNYResYgl~AcnGILFN  184 (345)
T COG1089         162 AYWITVNYRESYGLFACNGILFN  184 (345)
T ss_pred             HHheeeehHhhcCceeecceeec
Confidence            99999999999999999888876

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=150.11  Aligned_cols=156  Identities=16%  Similarity=0.122  Sum_probs=117.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      .|+|+||||+||||.+++++|+++|++|++++|+.....+ +... ...++.++.+|+++..            ..++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3689999999999999999999999999999885322221 1111 1246888999998763            245899


Q ss_pred             EEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||||........    .+++.++++|+.|+.++++++    ++.+ .+||++||...+...          ....+|+
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~  149 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY----------PGFSLYH  149 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC----------CCCchhH
Confidence            99999976433322    234668999999999999997    4444 489999996543111          1236899


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      .+|...+.+++.+.++   +|++++++||+.+
T Consensus       150 ~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~  181 (276)
T PRK06482        150 ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPA  181 (276)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcc
Confidence            9999999999888866   6999999999865

>PRK05717 oxidoreductase; Validated

Probab=99.76  E-value=1.7e-17  Score=147.06  Aligned_cols=160  Identities=14%  Similarity=0.059  Sum_probs=118.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ..++|+|+||||+|+||.++++.|+++|++|++++|+.....+.....  ..++.++.+|+++..            +.+
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--GENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            367899999999999999999999999999999987543222222211  246888999998763            235


Q ss_pred             CCEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||...+..      ..++++.++++|+.++.++++++.+    .+.+||++||...+....          ..
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------~~  154 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----------DT  154 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------CC
Confidence            899999999754321      1234567899999999999999864    234899999976542111          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..+++  +.+..++|+.+.
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~  190 (255)
T PRK05717        155 EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWID  190 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCc
Confidence            5799999999999999988864  667777777653

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.1e-17  Score=147.41  Aligned_cols=158  Identities=17%  Similarity=0.090  Sum_probs=119.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|......+....+. ...++.++.+|+++..            +.+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999999986433222222221 1235778899998774            236


Q ss_pred             CCEEEEcccCCCCCC-------CCCChHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAKRV-----GARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      +|+||||||......       ..+++++++++|+.++.++++++.+.     +.+||++||.+.|+             
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  150 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------------  150 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------
Confidence            899999999753211       11335668999999999999987643     24899999988764             


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +..+|+.+|.+.+.+++.+.+++   ++.+++++|+.+.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~  189 (250)
T PRK07774        151 YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPID  189 (250)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence            23589999999999999998775   6788888887654

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.76  E-value=1.7e-17  Score=148.23  Aligned_cols=156  Identities=17%  Similarity=0.160  Sum_probs=117.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh---hhcccCCCCeEEEEccccccc-----------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~v~~~~~D~~~~~-----------  177 (290)
                      +...+|+|+|||||++||.++|.+|+++|.+++.+.|...+.+..   +.......++..+.+|++++.           
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999988888765444332   222222236999999998773           


Q ss_pred             -ccCCCEEEEcccCCCCCCCCC-----ChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccc-cCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHYKF-----NPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVY-GDPLQHPQKET  245 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vy-g~~~~~~~~E~  245 (290)
                       ++++|++|||||... .....     +...++++|+.|+..+++++    ++.+ .+||.+||++-+ +.+..      
T Consensus        88 ~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~------  160 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR------  160 (282)
T ss_pred             hcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc------
Confidence             467999999999865 33222     23458999999999999986    4455 599999998643 21111      


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEE
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACR  279 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR  279 (290)
                           .-|..+|.+.+.+.+.+++++.-..++++
T Consensus       161 -----~~Y~ASK~Al~~f~etLR~El~~~~~~i~  189 (282)
T KOG1205|consen  161 -----SIYSASKHALEGFFETLRQELIPLGTIII  189 (282)
T ss_pred             -----cccchHHHHHHHHHHHHHHHhhccCceEE
Confidence                 26999999999999999998866565554

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.76  E-value=2.4e-17  Score=146.34  Aligned_cols=159  Identities=16%  Similarity=0.001  Sum_probs=118.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+. ...+...++. ...++.++.+|+++..            +.+
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999863 1112222221 1346778889998752            246


Q ss_pred             CCEEEEcccCCCC-CC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.... ..    ...+++..+++|+.++..+++++.    +.+ .+||++||.+.|+.            ..
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~  152 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------NR  152 (260)
T ss_pred             CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------CC
Confidence            9999999985321 11    223456788999999987776654    444 48999999877642            12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                      .+|+.+|.+.+.+++.+..++   |+++..++|+.+.-
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  190 (260)
T PRK12823        153 VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEA  190 (260)
T ss_pred             CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCC
Confidence            479999999999999988765   89999999998754

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.76  E-value=1.9e-17  Score=162.80  Aligned_cols=166  Identities=18%  Similarity=0.180  Sum_probs=124.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCc--hhhhh-ccc------------C-------CCCe
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGR--KENVM-HHF------------G-------NPNF  166 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~--~~~~~-~~~------------~-------~~~v  166 (290)
                      .-.++|+|+|||||||||++|+++|++.+.   +|+++.|.....  .+.+. ++.            +       ..++
T Consensus       115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki  194 (605)
T PLN02503        115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL  194 (605)
T ss_pred             hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence            445789999999999999999999998754   689998854322  11111 110            1       2468


Q ss_pred             EEEEcccccccc-----------cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCcc
Q 022900          167 ELIRHDVVEPLL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEV  233 (290)
Q Consensus       167 ~~~~~D~~~~~~-----------~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~v  233 (290)
                      .++.+|++++.+           .++|+|||+|+...   ...+++..+++|+.|+.+++++|++.+  +++|++||++|
T Consensus       195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV  271 (605)
T PLN02503        195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV  271 (605)
T ss_pred             EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence            899999988732           35999999999643   346788899999999999999998865  48999999999


Q ss_pred             ccCCCCCCCCCCC------------------------------------------------------------CCCCChh
Q 022900          234 YGDPLQHPQKETY------------------------------------------------------------WGNVNPI  253 (290)
Q Consensus       234 yg~~~~~~~~E~~------------------------------------------------------------~~~~~py  253 (290)
                      ||...+. +.|..                                                            .+-+|.|
T Consensus       272 yG~~~G~-i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY  350 (605)
T PLN02503        272 NGQRQGR-IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY  350 (605)
T ss_pred             ecCCCCe-eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence            9975421 11111                                                            1123778


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      ..+|..+|.+++.+.  .+++++|+||+++
T Consensus       351 t~TK~lAE~lV~~~~--~~LPv~IvRPsiV  378 (605)
T PLN02503        351 VFTKAMGEMVINSMR--GDIPVVIIRPSVI  378 (605)
T ss_pred             HHHHHHHHHHHHHhc--CCCCEEEEcCCEe
Confidence            999998999888654  3899999999998

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.76  E-value=1.2e-17  Score=148.26  Aligned_cols=163  Identities=23%  Similarity=0.303  Sum_probs=113.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cc-cCCCEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LL-LEVDQIY  185 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~-~~vD~vi  185 (290)
                      ...+|+|+||||+|+||++++++|+++|++|+++.|+.........   ...+++++.+|+.+.      .+ .++|+||
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            3567899999999999999999999999999999886432221111   124688899998763      23 4799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~  264 (290)
                      |++|....    .++...+++|+.++.++++++++.+. +||++||.++||.....+..+.+ ...++++.+...+ ...
T Consensus        91 ~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~-~~~~~~~~~~~~k-~~~  164 (251)
T PLN00141         91 CATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAY-IFLNLFGLTLVAK-LQA  164 (251)
T ss_pred             ECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcch-hHHHHHHHHHHHH-HHH
Confidence            99985321    12233457899999999999998874 99999999999855433333322 1223344332222 223


Q ss_pred             HHHHHHhCCCeeEEEeeeee
Q 022900          265 LVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~lr  284 (290)
                      +.+.++.+++++++||+.+.
T Consensus       165 e~~l~~~gi~~~iirpg~~~  184 (251)
T PLN00141        165 EKYIRKSGINYTIVRPGGLT  184 (251)
T ss_pred             HHHHHhcCCcEEEEECCCcc
Confidence            44445679999999999775

>PLN02253 xanthoxin dehydrogenase

Probab=99.75  E-value=3.1e-17  Score=147.47  Aligned_cols=161  Identities=17%  Similarity=0.095  Sum_probs=119.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|......+...++....++.++.+|++++.            +.+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            36788999999999999999999999999999998854322222222222346889999998763            236


Q ss_pred             CCEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCc-cccCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWG  248 (290)
Q Consensus       181 vD~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~-vyg~~~~~~~~E~~~~  248 (290)
                      +|+||||||......      ..++++.++++|+.|+.++++++.+    .+ .+||++||.+ .++..           
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------  163 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----------  163 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-----------
Confidence            999999999753221      1234577899999999999998753    22 3799998865 34422           


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.+..++   ++.+..++|+.+.
T Consensus       164 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~  202 (280)
T PLN02253        164 GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVP  202 (280)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence            12479999999999999988765   7888888888763

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.4e-17  Score=149.37  Aligned_cols=164  Identities=17%  Similarity=0.123  Sum_probs=113.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++|+|+||||+||||.+++++|+++|++|++++|+.+...+....+.   ...++.++.+|+.+..            +
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            577999999999999999999999999999999986433322222221   2356888999998763            2


Q ss_pred             cCCCEEEEcccCCCCCC--CCCChHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEcCCccc--cCCCCCCCC-CCCCC
Q 022900          179 LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGL----AKRVG-ARFLLTSTSEVY--GDPLQHPQK-ETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a----~~~~~-~riV~vSS~~vy--g~~~~~~~~-E~~~~  248 (290)
                      .++|+||||||...+..  ..++++.++++|+.|+..+++.    +++.+ .+||++||.+.+  +........ +..+.
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence            46999999999754332  2345677899999996655444    44444 499999998743  321111111 11223


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeE
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKA  277 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~i  277 (290)
                      +..+|+.+|.+.+.+++.++.++   ++++.+
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~  205 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIA  205 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEE
Confidence            44679999999999888888765   554443

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.5e-17  Score=143.56  Aligned_cols=159  Identities=14%  Similarity=0.003  Sum_probs=120.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.....+.........++.++.+|++++.            +.++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999865433332322223456889999998763            2469


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||........    +++++++++|+.++.++++++.    +.+ .+|+++||.+. +|..           ...
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~~~  151 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR-----------GRA  151 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC-----------Ccc
Confidence            9999999975433222    2345679999999988877653    444 48999999754 4422           235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      +|+..|.+.+.+++.+..++   ++++++++++++
T Consensus       152 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~  186 (252)
T PRK06138        152 AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTI  186 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCc
Confidence            79999999999998888765   899999999876

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.4e-17  Score=143.37  Aligned_cols=158  Identities=15%  Similarity=0.097  Sum_probs=117.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+.+...+...+.  ..++.++.+|+++..            +.++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999988533222222222  246778888987652            2468


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH---cCCeEEEEcCC-ccccCCCCCCCCCCCCCCCChh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR---VGARFLLTSTS-EVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~---~~~riV~vSS~-~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |+||||||......    ..++++.++++|+.++.++++++.+   .+.++|++||. +.||.+           ...+|
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~-----------~~~~Y  150 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP-----------NSSVY  150 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC-----------CccHH
Confidence            99999999754322    1234567899999999999999875   23477777774 456532           23589


Q ss_pred             hhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +..|.+.+.+++.+..++   |+++.+++|+.+.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~  184 (249)
T PRK06500        151 AASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQ  184 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCC
Confidence            999999999998887654   8899999998764

>PRK06128 oxidoreductase; Provisional

Probab=99.74  E-value=5.4e-17  Score=147.77  Aligned_cols=161  Identities=14%  Similarity=0.058  Sum_probs=121.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+|+||.++++.|+++|++|+++.+..... .+.+...+  ...++.++.+|+.+..            +
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999887643211 11121111  2346788999998752            2


Q ss_pred             cCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .++|+||||||......     ..++++.++++|+.|++++++++.+.   +.+||++||.+.|....          ..
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~  202 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----------TL  202 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------Cc
Confidence            46999999999643222     22356779999999999999998753   34999999988874321          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..+   .|+++.+++|+.+.
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~  239 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVW  239 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCc
Confidence            46999999999999888876   48999999998875

>PRK06196 oxidoreductase; Provisional

Probab=99.74  E-value=5.3e-17  Score=148.79  Aligned_cols=169  Identities=17%  Similarity=0.084  Sum_probs=120.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++   .++.++.+|+++..            ..+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l---~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI---DGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            356789999999999999999999999999999998643333222222   24788899998763            246


Q ss_pred             CCEEEEcccCCCCCC--CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCC--CCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPL--QHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~--~~~~~E~~~~~~~  251 (290)
                      +|+||||||...+..  ..++++.++++|+.|+.++++++    ++.+ .+||++||.+.+....  ..+..+....+..
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~  179 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL  179 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence            999999999754322  23456788999999988887764    3444 5999999976432111  1111112222345


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .|+.+|.+.+.+++.+.++   +|+++++++|+.+.
T Consensus       180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~  215 (315)
T PRK06196        180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGIL  215 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCccc
Confidence            7999999888888777664   47999999998774

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.74  E-value=7.5e-17  Score=144.99  Aligned_cols=157  Identities=13%  Similarity=-0.015  Sum_probs=117.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      .+++|+||||+|+||.+++++|+++|++|++++|+..... .+... ...++..+.+|++++.            +.++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-DFEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-HHHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999998543221 11111 2346888899998763            23589


Q ss_pred             EEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||.........    ++.+++++|+.|+.++++++.    +.+ .+||++||.+.+....          ...+|
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~----------~~~~Y  150 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP----------GIGYY  150 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC----------Ccchh
Confidence            9999999754332222    245679999999999999853    333 4899999976543211          23579


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +.+|...+.+++.+..+   +|++++++||+.+
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v  183 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSF  183 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCc
Confidence            99999988888888765   5999999999876

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.74  E-value=6.1e-17  Score=143.47  Aligned_cols=161  Identities=14%  Similarity=0.047  Sum_probs=120.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+.. ..++.++.+|++++.            +.+
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5688999999999999999999999999999998864333222222211 245888999998763            245


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||...+....    +++++++++|+.++.++++++.+.    + .+||++||...+...          ....
T Consensus        88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------~~~~  157 (255)
T PRK07523         88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR----------PGIA  157 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC----------CCCc
Confidence            89999999975433322    234668899999999999988643    3 389999997543211          1235


Q ss_pred             hhhhhHHHHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      +|+..|.+.+.+++.+..   .+|+++.++||+.+.
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~  193 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFD  193 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECccc
Confidence            799999999998888876   458999999998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.6e-17  Score=144.13  Aligned_cols=161  Identities=14%  Similarity=0.048  Sum_probs=120.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+....++...++. ...++.++.+|++++.            +.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999986433222222221 1346889999998763            246


Q ss_pred             CCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||...+..     ...+++.++++|+.++..+++++.+    .+.+||++||...+...          ....
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----------~~~~  152 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ----------PKYG  152 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC----------CCcc
Confidence            899999999643311     1234567899999999999999864    23489999997654211          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+..|...+.+++.+..++   ++++++++|+.+.
T Consensus       153 ~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~  188 (258)
T PRK07890        153 AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIW  188 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccC
Confidence            79999999999898888654   8999999998774

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5e-17  Score=145.91  Aligned_cols=157  Identities=11%  Similarity=-0.001  Sum_probs=117.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.....+. ... ...++..+.+|++++.            +.++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADL-AEK-YGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHh-ccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999999999999999999999999999864322221 111 1346778899998763            24689


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||.......    .+++++++++|+.++.++++++    ++.+ .+||++||.+.+....          ...+|
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y  149 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP----------MSGIY  149 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC----------CccHH
Confidence            99999997543322    2346778999999999988886    3444 4899999987664221          12579


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +.+|...+.+++.+..+   +|++++++||+.+
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~  182 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGY  182 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCc
Confidence            99999988888887764   6899999999755

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.74  E-value=5e-17  Score=144.16  Aligned_cols=161  Identities=14%  Similarity=0.031  Sum_probs=118.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEcccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPLL------------L  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~------------~  179 (290)
                      .++++++|||||++||.+++++|+++|++|+++.|+.++..+...++..  ..+++++.+|++++..            .
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            5678999999999999999999999999999999976555554444432  3568999999987731            2


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .+|++|||||+.....+.    ++..+++++|+.+...+.++..    +++. +||+++|.+-|-...          ..
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p----------~~  153 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP----------YM  153 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc----------ch
Confidence            599999999987554432    2346689999999999988854    4443 899999987663211          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .-|+.+|...-.+.+.+..+   +|+++..+=|+.++
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~  190 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTR  190 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Confidence            46888888765555555543   46777777666543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.2e-17  Score=144.87  Aligned_cols=158  Identities=10%  Similarity=-0.014  Sum_probs=116.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      +|+|+||||+|+||.++++.|+++|++|++++|+.+...+.........++.++.+|++++.            ...+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            46899999999999999999999999999999864332222222211127889999998763            234899


Q ss_pred             EEEcccCCCCCCCC-----CChHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCCh
Q 022900          184 IYHLACPASPVHYK-----FNPVKTIKTNVVGTLNMLGL----AKRVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       184 vih~Ag~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~a----~~~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~p  252 (290)
                      +|||||........     ++++.++++|+.|+.+++++    +++.+ .+||++||... ++.+           ....
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~  150 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLP-----------GAGA  150 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC-----------CCcc
Confidence            99999975432211     33567899999999998875    34444 48999999754 3322           1247


Q ss_pred             hhhhHHHHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..   .+|+++++++|+.+.
T Consensus       151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  185 (257)
T PRK07024        151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIR  185 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCc
Confidence            99999999988888764   458999999998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.6e-17  Score=146.03  Aligned_cols=161  Identities=16%  Similarity=0.076  Sum_probs=118.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999886433333222221 1346788899998763            246


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||........    ++++.++++|+.|+.++++++.    +.+  .+||++||.+.+...          ...
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~----------~~~  153 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN----------AGL  153 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC----------CCC
Confidence            89999999975433322    2346678999999999999874    333  489999998766321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.+..+   .|+++++++|+.+.
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  190 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVE  190 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence            57999998866666666644   48999999998764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.74  E-value=5.3e-17  Score=157.51  Aligned_cols=163  Identities=13%  Similarity=0.020  Sum_probs=113.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----------CCCCeEEEEccccccc----
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----------GNPNFELIRHDVVEPL----  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~v~~~~~D~~~~~----  177 (290)
                      ...++++|+||||+|+||.+++++|+++|++|++++|+..........+.          ...+++++.+|+.+..    
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            34578899999999999999999999999999999987543322211110          1235889999998753    


Q ss_pred             -ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          178 -LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                       +.++|+||||+|....  ...++...+++|+.|+.+++++|++.+. +||++||.+++...    ..+..+.....|..
T Consensus       156 aLggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~~~~sk~~~~~  229 (576)
T PLN03209        156 ALGNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAAILNLFWGVLC  229 (576)
T ss_pred             HhcCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----ccccchhhHHHHHH
Confidence             5689999999986421  1234667789999999999999998885 99999998763111    01111111112222


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      .+...|    .+....|++++++|++.+.
T Consensus       230 ~KraaE----~~L~~sGIrvTIVRPG~L~  254 (576)
T PLN03209        230 WKRKAE----EALIASGLPYTIVRPGGME  254 (576)
T ss_pred             HHHHHH----HHHHHcCCCEEEEECCeec
Confidence            333233    3334579999999999874

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9.3e-17  Score=147.29  Aligned_cols=171  Identities=16%  Similarity=0.064  Sum_probs=122.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+++||.+++++|+++|++|++++|+.+...+...++.   ...++.++.+|+.+..            .
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999987543333332221   2346888999997753            2


Q ss_pred             cCCCEEEEcccCCCCCC---CCCChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCcc-ccCCCCCCCCCC-CCCC
Q 022900          179 LEVDQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEV-YGDPLQHPQKET-YWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~v-yg~~~~~~~~E~-~~~~  249 (290)
                      .++|++|||||......   ..++++.++++|+.|.+.+++.+.    +...+||++||.+. ++.....+..+. ....
T Consensus        92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~  171 (313)
T PRK05854         92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAG  171 (313)
T ss_pred             CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcc
Confidence            45999999999764322   335678899999999998888765    23358999999864 332222222222 1233


Q ss_pred             CChhhhhHHHHHHHHHHHHHH-----hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ-----FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~-----~gl~~~ilR~~~lr  284 (290)
                      ...|+.+|.+...+.+.+.++     .|+.+..+-|+.+.
T Consensus       172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~  211 (313)
T PRK05854        172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAP  211 (313)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceec
Confidence            457999999988888888764     35777777777663

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.74  E-value=7.4e-17  Score=142.12  Aligned_cols=158  Identities=11%  Similarity=0.054  Sum_probs=119.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+..  .+...... ...++.++.+|++++.            ..+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999988531  11111111 1346888999998763            246


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.......    ..++++++++|+.++.++++++.+    .+  .+||++||...|....          ..
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~  150 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI----------RV  150 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC----------CC
Confidence            9999999997543222    234567899999999999998753    33  3899999987775321          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+.+.+++.++.++   |++++.++|+.+
T Consensus       151 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v  186 (248)
T TIGR01832       151 PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYM  186 (248)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcC
Confidence            479999999999999998875   789999998865

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.3e-16  Score=140.20  Aligned_cols=161  Identities=16%  Similarity=0.066  Sum_probs=120.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-----CCCCeEEEEccccccc-----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~-----------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|...+..+......     ...++.++.+|+.+..           
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999998875444333322111     1346889999998763           


Q ss_pred             -ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~-----~~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                       ..++|+||||||.......    .+++..++++|+.++.++++++.     +.+ .+||++||...+...         
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  154 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN---------  154 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------
Confidence             1468999999997543222    22356689999999999999987     334 489999997665321         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       ....+|+..|.+.+.+++.+..+   .++++++++|+.+.
T Consensus       155 -~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~  194 (249)
T PRK12827        155 -RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAIN  194 (249)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcC
Confidence             12357999999888888877765   38999999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=8.4e-17  Score=141.63  Aligned_cols=160  Identities=13%  Similarity=0.070  Sum_probs=118.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+....+....++.++.+|+.++.            ..++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999875433332222222345888999998763            2368


Q ss_pred             CEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||......     ..+++++++++|+.++.++++.+.+    .+ .+||++||.+.++...          ...
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~  152 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP----------GLG  152 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC----------Cch
Confidence            99999999743222     1234567899999999988887653    33 4899999987764221          235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      +|+.+|...+.+++.+..++   +++++.++|+.+
T Consensus       153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~  187 (251)
T PRK07231        153 WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVV  187 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECcc
Confidence            79999988888888777654   778888888865

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.5e-16  Score=142.22  Aligned_cols=153  Identities=16%  Similarity=0.072  Sum_probs=115.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      ++++|+||||+|+||.+++++|+++|++|++++|+.....       ...+++++.+|++++.            +.++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-------PIPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            4578999999999999999999999999999998642221       1235788899998763            24689


Q ss_pred             EEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||........    ++++.++++|+.|+.++++++    ++.+ .+||++||...+....          ....|
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y  145 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP----------YMALY  145 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC----------CccHH
Confidence            999999975433222    235678999999999999985    4455 4999999976553211          12479


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +.+|...+.+.+.+..+   .|+++++++|+.+.
T Consensus       146 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~  179 (270)
T PRK06179        146 AASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTK  179 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcc
Confidence            99999888888777654   59999999997653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.73  E-value=8.5e-17  Score=144.48  Aligned_cols=158  Identities=15%  Similarity=0.083  Sum_probs=117.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc-----------ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL-----------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~-----------~~~  180 (290)
                      ++++++||||+|+||.++++.|+++|++|++++|+.....+......   .+.++.++.+|++++.           +.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999986433322221111   1346889999998763           246


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCc-cccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||...+....    +++++++++|+.++.++++++    ++.+ .+||++||.+ ++|..           ..
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~  150 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP-----------GL  150 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC-----------CC
Confidence            89999999975443322    234567899999999998885    4444 4899999964 44422           23


Q ss_pred             ChhhhhHHHHHHHHHHHH---HHhCCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFI---SQFRPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~---~~~gl~~~ilR~~~l  283 (290)
                      .+|+.+|...+.+++.+.   ..+|++++++||+.+
T Consensus       151 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~  186 (280)
T PRK06914        151 SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSY  186 (280)
T ss_pred             chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCc
Confidence            579999999888888876   346999999999654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.6e-16  Score=144.48  Aligned_cols=164  Identities=13%  Similarity=0.103  Sum_probs=120.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ...++++|+||||+|+||.++++.|+++|++|++++|+.+...+....+. ...++.++.+|+.++.            +
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34567899999999999999999999999999999986433222222221 1345788899998763            3


Q ss_pred             cCCCEEEEcccCCCCCCCC------CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~------~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|+||||||........      .+.+.++++|+.|+.++++++.    +.+ .+||++||.+.++...         
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  186 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS---------  186 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC---------
Confidence            4799999999975433222      2345689999999999988753    444 4999999976654210         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.+..++   |+.+++++++.++
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~  226 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVA  226 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCccc
Confidence            012579999999988888887654   7888888887654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.73  E-value=4.1e-17  Score=154.05  Aligned_cols=152  Identities=21%  Similarity=0.244  Sum_probs=112.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh--hhhcc-cCCCCeEEEEccccccc-----cc----
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHH-FGNPNFELIRHDVVEPL-----LL----  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~-~~~~~v~~~~~D~~~~~-----~~----  179 (290)
                      ...++++|+||||+||||++++++|+++|++|++++|+......  ..... ....+++++.+|+++..     +.    
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            33567899999999999999999999999999999986432211  00001 11246889999998763     22    


Q ss_pred             CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHH
Q 022900          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      ++|+||||++....     ...+.+++|+.++.+++++|++.+. +||++||.++|+             +..+|...|.
T Consensus       136 ~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~-------------p~~~~~~sK~  197 (390)
T PLN02657        136 PVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK-------------PLLEFQRAKL  197 (390)
T ss_pred             CCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC-------------cchHHHHHHH
Confidence            59999999984221     1234567899999999999999885 899999998763             2235666677


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      ..|..++.  ...+++++++|++++
T Consensus       198 ~~E~~l~~--~~~gl~~tIlRp~~~  220 (390)
T PLN02657        198 KFEAELQA--LDSDFTYSIVRPTAF  220 (390)
T ss_pred             HHHHHHHh--ccCCCCEEEEccHHH
Confidence            66665543  347999999999765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.73  E-value=1e-16  Score=141.81  Aligned_cols=170  Identities=14%  Similarity=0.081  Sum_probs=117.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+.+...+....+.   ....+.++.+|+.++.            +
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999886543332222221   2335677789998763            2


Q ss_pred             cCCCEEEEcccCCCCC---C-CC---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV---H-YK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~---~-~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      .++|+|||||+.....   . .+   ..+..++++|+.++..+++++.+    .+ .+||++||.+.+.........+..
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            3489999999753211   1 11   23466789999999888777543    34 489999997654322211122222


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ......|+.+|...+.+++.+..+   .++++++++|+.+
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~  201 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGI  201 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccc
Confidence            222346999998888888877775   4788889998865

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.73  E-value=8.4e-17  Score=147.67  Aligned_cols=141  Identities=16%  Similarity=0.150  Sum_probs=106.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~  191 (290)
                      |+|+|||||||||++++++|+++|++|++++|+..... .    ....+++++.+|+.++.     +.++|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~----l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-F----LKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-h----HhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence            48999999999999999999999999999998642211 1    11246889999998763     56899999987631


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                           ..++..+.++|+.++.+++++|++.++ |||++||.+.+..            +..||...|...|.+    .++
T Consensus        76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~------------~~~~~~~~K~~~e~~----l~~  134 (317)
T CHL00194         76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY------------PYIPLMKLKSDIEQK----LKK  134 (317)
T ss_pred             -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc------------CCChHHHHHHHHHHH----HHH
Confidence                 224456778999999999999999996 9999999543210            124677777766554    345


Q ss_pred             hCCCeeEEEeeee
Q 022900          271 FRPSRKACRFFIL  283 (290)
Q Consensus       271 ~gl~~~ilR~~~l  283 (290)
                      ++++++++|++.+
T Consensus       135 ~~l~~tilRp~~~  147 (317)
T CHL00194        135 SGIPYTIFRLAGF  147 (317)
T ss_pred             cCCCeEEEeecHH
Confidence            7999999999854

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=141.98  Aligned_cols=161  Identities=15%  Similarity=-0.014  Sum_probs=116.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+....+. ...++.++.+|+++..            ..+
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999986543333332221 1345788899998763            135


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHH----HHHHHHH-HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGT----LNMLGLA-KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt----~~ll~a~-~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.......    .++++.++++|+.++    .++++++ ++.+ .+||++||...+...          ...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~----------~~~  154 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS----------PLK  154 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC----------CCC
Confidence            8999999997543222    223566789999994    4455555 4444 499999996543211          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|...+.+++.+.++   .++.++++||+.+.
T Consensus       155 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~  191 (262)
T PRK13394        155 SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVR  191 (262)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence            57999999888888888765   47888999998765

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.73  E-value=1.2e-16  Score=140.62  Aligned_cols=163  Identities=18%  Similarity=0.053  Sum_probs=121.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+. ...++.++.+|+.++.            +.+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999986433232222222 2345889999998763            236


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||......    ...++...+++|+.++.++++++.    +.+ .+||++||...++..         .....
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~---------~~~~~  154 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG---------YPGLA  154 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC---------CCCcc
Confidence            899999999754422    223456789999999999999874    333 489999998765211         01235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      +|+.+|.+.+.+++.+..+   .+++++++||+++..
T Consensus       155 ~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~  191 (251)
T PRK12826        155 HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDT  191 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCc
Confidence            7999999888888887655   489999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.73  E-value=9.1e-17  Score=142.76  Aligned_cols=160  Identities=11%  Similarity=0.020  Sum_probs=119.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.+...+...++.   ...++.++.+|++++.            +
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999999986543333322222   2356888999998763            2


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|++|||||......    ..++++.++++|+.++.++++++.+    .+ .+||++||...+...          ..
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  154 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII----------PG  154 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC----------CC
Confidence            46999999999643222    2234677899999999999998653    33 489999997654211          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+++.+..++   |+.+..++|+.+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v  191 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYI  191 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCc
Confidence            2479999999999888888765   677888888765

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.2e-16  Score=141.39  Aligned_cols=158  Identities=14%  Similarity=0.045  Sum_probs=117.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .|+++||||+|+||.++++.|+++|++|++++|......+.. .... ...++.++.+|++++.            +.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            368999999999999999999999999999988643221111 1111 2346889999998763            2469


Q ss_pred             CEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEcCCccc-cCCCCCCCC
Q 022900          182 DQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLLTSTSEVY-GDPLQHPQK  243 (290)
Q Consensus       182 D~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~~-----------~~riV~vSS~~vy-g~~~~~~~~  243 (290)
                      |+||||||......      ..+++++++++|+.++.++++++.+.           ..+||++||...+ +..      
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------  155 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP------  155 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC------
Confidence            99999999753221      12345678999999999999987432           1269999997654 321      


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                           ...+|+.+|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       156 -----~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~  194 (256)
T PRK12745        156 -----NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIK  194 (256)
T ss_pred             -----CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCc
Confidence                 2357999999999998888864   68999999998775

>PRK07985 oxidoreductase; Provisional

Probab=99.73  E-value=1.5e-16  Score=144.66  Aligned_cols=161  Identities=16%  Similarity=0.042  Sum_probs=121.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC-chhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|.... ..+.+....  ...++.++.+|++++.            +
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999988764321 122222221  2346778899998763            3


Q ss_pred             cCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +++|++|||||......     ..+++++++++|+.|+.++++++.+.   +.+||++||.+.|....          ..
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------~~  196 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------HL  196 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC----------Cc
Confidence            46899999999642111     22456778999999999999998653   34899999988764221          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~  233 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIW  233 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCc
Confidence            47999999999988888876   58999999999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=2.1e-16  Score=138.33  Aligned_cols=163  Identities=13%  Similarity=0.031  Sum_probs=120.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++|+|+||||+|+||.+++++|+++|++|+++.|......+......  ...++.++.+|+.++.            +.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999887775433322222211  2356888999997663            24


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||......    ...++...+++|+.++.++++.+.    +.+ .++|++||...+....          ..
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~----------~~  153 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP----------GR  153 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC----------Cc
Confidence            6899999999654333    223356789999999999999873    444 4999999987763221          22


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeecc
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLYR  286 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~~  286 (290)
                      ..|...|...+.+++.+..+   .+++++++||+.+...
T Consensus       154 ~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~  192 (249)
T PRK12825        154 SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTD  192 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCC
Confidence            46889998888888777664   5899999999887643

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.6e-16  Score=141.60  Aligned_cols=155  Identities=13%  Similarity=0.042  Sum_probs=113.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------c-cCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L-LEV  181 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~-~~v  181 (290)
                      .+++|+||||+|+||.++++.|+++|++|++++|+.+...    .. ....++++.+|++++.            . .++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~----~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA----AL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----HH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            4579999999999999999999999999999998643222    11 1235788899998763            1 358


Q ss_pred             CEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHH----HHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNM----LGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~l----l~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||........+    +.+.++++|+.|+.++    +..+++.+ .+||++||...+...          ....+
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  147 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM----------KYRGA  147 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC----------Cccch
Confidence            99999999764433322    3456899999995554    44555555 499999997544211          12358


Q ss_pred             hhhhHHHHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..   .+|+++++++|+.+.
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~  182 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIE  182 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence            99999999998888763   469999999998664

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.72  E-value=9.4e-17  Score=161.39  Aligned_cols=148  Identities=14%  Similarity=0.117  Sum_probs=110.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEE-EEeCCCCCchhhhhcccCCCCeEEEEcccccccc--cCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVI-VVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--~~vD~vih~Ag~  190 (290)
                      ...|+|+||||+||||++|++.|.++|++|. ...+ .                  .+.+.....+  .++|+|||||+.
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~-l------------------~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGR-L------------------EDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEeeccc-c------------------ccHHHHHHHHHhhCCCEEEECCcc
Confidence            3457899999999999999999999999884 2221 0                  0011111111  268999999998


Q ss_pred             CCCC---CCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCC------CCCCCCCCC-CCC-CChhhhhHHH
Q 022900          191 ASPV---HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP------LQHPQKETY-WGN-VNPIGTYFFS  259 (290)
Q Consensus       191 ~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~------~~~~~~E~~-~~~-~~py~~~k~~  259 (290)
                      +...   .++.++...+++|+.|+.+++++|++.+++++++||.+||+..      ...++.|+. +.+ .++|+.+|..
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~  518 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAM  518 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHH
Confidence            6432   2456888999999999999999999999888999999998642      124677654 344 3899999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          260 FSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       260 ~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      .|.++..+.     +..++|+..++.
T Consensus       519 ~E~~~~~~~-----~~~~~r~~~~~~  539 (668)
T PLN02260        519 VEELLREYD-----NVCTLRVRMPIS  539 (668)
T ss_pred             HHHHHHhhh-----hheEEEEEEecc
Confidence            999888763     356777777764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.72  E-value=1.7e-16  Score=139.76  Aligned_cols=159  Identities=16%  Similarity=0.051  Sum_probs=118.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ++++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|+.+..            +.++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            56899999999999999999999999999999886433222221111 2356889999997653            2368


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||........    .+++.++++|+.++.++++++.    +.+ .+||++||.+.|+...          ...+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~----------~~~~  151 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS----------GEAV  151 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC----------CCch
Confidence            9999999964322211    2245679999999999988864    344 4899999987765321          1247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.+..++   ++++++++|+.+
T Consensus       152 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~  185 (250)
T TIGR03206       152 YAACKGGLVAFSKTMAREHARHGITVNVVCPGPT  185 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcc
Confidence            9999998888888887664   899999999876

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=1.6e-16  Score=141.16  Aligned_cols=164  Identities=16%  Similarity=0.062  Sum_probs=118.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+..........+. ...++.++.+|++++.            ..+
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999986432222221111 2346788999998763            236


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc-----C-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV-----G-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~-----~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||........    +.+.+++++|+.++.++++++.+.     + .+||++||.+.+......      ..+.
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------~~~~  163 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------VMDT  163 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc------ccCc
Confidence            89999999964322222    234668899999999999987543     3 389999997654322111      1133


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|+..|...+.+++.+.+++   |+.+..++|+.+
T Consensus       164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~  199 (259)
T PRK08213        164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFF  199 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcC
Confidence            689999999999999988764   677777777655

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.4e-16  Score=138.96  Aligned_cols=155  Identities=14%  Similarity=0.081  Sum_probs=117.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ..++|+|+||||+|+||.++++.|+++|++|++++|+....        ...++.++.+|+.++.            +.+
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERLGG   77 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999853211        1235788999998763            246


Q ss_pred             CCEEEEcccCCCCC------CCCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV------HYKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       181 vD~vih~Ag~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +|+||||||.....      ...++++.++++|+.++.++++++.    +.+ .+||++||...+...     .    ..
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~----~~  148 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL-----P----ES  148 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----C----CC
Confidence            89999999964211      1223467789999999998877653    333 389999997655321     1    12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|...+.+++.++.++   |+++.+++|+.+.
T Consensus       149 ~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~  186 (260)
T PRK06523        149 TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIE  186 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence            3589999999988888888654   7889999998774

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=139.03  Aligned_cols=160  Identities=14%  Similarity=0.017  Sum_probs=117.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhccc-CCCCeEEEEcccccccc-------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL-------------  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~-------------  178 (290)
                      +++++++||||+|+||.++++.|+++|++|+++ .|+.....+...... ...++.++.+|+.++..             
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            456899999999999999999999999999875 454322222222221 13468889999987631             


Q ss_pred             -----cCCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 -----LEVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 -----~~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                           .++|+||||||........+    .+..++++|+.++.++++++.+.   ..+||++||..++...         
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~---------  154 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF---------  154 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC---------
Confidence                 25899999999754333222    23567889999999999998753   2389999998776421         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                       ....+|+.+|.+.+.+++.+..+   +++++++++|+.+
T Consensus       155 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~  193 (254)
T PRK12746        155 -TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYT  193 (254)
T ss_pred             -CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCc
Confidence             12347999999999988888764   5788999998765

>PRK09135 pteridine reductase; Provisional

Probab=99.71  E-value=2.3e-16  Score=138.51  Aligned_cols=162  Identities=11%  Similarity=0.082  Sum_probs=117.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++++|+||||+||||++++++|+++|++|++++|......+.....+   ....+.++.+|++++.            +
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            355799999999999999999999999999999986433222221111   1235888999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .++|+||||||...+...    ..+++.++++|+.|+.++++++.+.    +..++.+++.  ++.        ....+.
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~  153 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI--HAE--------RPLKGY  153 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh--hhc--------CCCCCc
Confidence            368999999996533221    2345778999999999999998642    2356666652  221        112345


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeeeec
Q 022900          251 NPIGTYFFSFSLIFLVFISQF--RPSRKACRFFILLY  285 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~lr~  285 (290)
                      .+|+.+|...+.+++.+.+++  +++++++||+.+..
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~  190 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILW  190 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccC
Confidence            689999999999999999876  58899999987653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.9e-16  Score=141.02  Aligned_cols=160  Identities=11%  Similarity=0.013  Sum_probs=119.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++++.            +.+
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            566899999999999999999999999999999886433222211111 1246888899998763            246


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||........    +++..++++|+.++.++++++.+    .+ .+||++||...|....          ...
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~  157 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP----------HMG  157 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----------Ccc
Confidence            89999999975432222    23456789999999999988753    33 3899999987764221          235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      +|+.+|...+.+++.+...+   |++++++||+.+
T Consensus       158 ~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~  192 (274)
T PRK07775        158 AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPT  192 (274)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcc
Confidence            79999999999999888765   899999999865

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.1e-16  Score=141.46  Aligned_cols=162  Identities=17%  Similarity=0.086  Sum_probs=121.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+.....+.....+  ...++.++.+|+++..            +
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999886433222222222  1346888999997763            2


Q ss_pred             cCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .++|+||||||......     ..+++..++++|+.++.++++++.+.   +.+||++||.+.|.....          .
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------~  192 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------L  192 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------c
Confidence            36899999999753321     11234678999999999999998653   248999999887753221          2


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++   |++++.++++.+.
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~  229 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIW  229 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCC
Confidence            469999999999898888775   7888888887653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.71  E-value=1.3e-16  Score=141.49  Aligned_cols=159  Identities=11%  Similarity=0.064  Sum_probs=118.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+++||.+++++|+++|++|++++|...  ++...... ...++.++.+|++++.            +.+
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999887431  11111111 2346888999998773            346


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|++|||||.......    .++++.++++|+.++.++++++.    +.+  .+||++||...+.....          .
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------~  153 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR----------V  153 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC----------C
Confidence            9999999997543221    24467789999999999988764    332  48999999876542211          1


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.++.+   +|+++..+.|+.+.
T Consensus       154 ~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~  190 (251)
T PRK12481        154 PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMA  190 (251)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCc
Confidence            36999999998888888764   58899999988764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.71  E-value=6.4e-16  Score=137.62  Aligned_cols=150  Identities=17%  Similarity=0.077  Sum_probs=114.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+...          ..++.++.+|++++.            +.++
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999885322          125778899998763            2469


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||........    +++++++++|+.|+.++++++.+    .+ .+||++||...+...          ....+
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  143 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT----------RNAAA  143 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC----------CCCch
Confidence            9999999975332222    23566799999999999888753    33 489999998765321          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHhC--CCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQFR--PSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+.+.+..+++  +.+..+.|+.+
T Consensus       144 Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v  176 (258)
T PRK06398        144 YVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSI  176 (258)
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence            99999999999999988763  56666666654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=141.11  Aligned_cols=158  Identities=15%  Similarity=0.110  Sum_probs=118.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++++||||+|+||.++++.|+++|++|++++|+.....+.....  ..++.++.+|++++.            +.++
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998654332222222  245888899997763            2469


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc------CCeEEEEcCCc-cccCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV------GARFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~------~~riV~vSS~~-vyg~~~~~~~~E~~~~~~  250 (290)
                      |++|||||.......    .++++.++++|+.++.++++++.+.      +.+||++||.. .++..           +.
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~  150 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA-----------LV  150 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC-----------CC
Confidence            999999997532221    2345678999999999999997542      24899999964 34421           33


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~  187 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVD  187 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence            57999999988888888764   58899999998764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.71  E-value=3.2e-16  Score=137.99  Aligned_cols=161  Identities=16%  Similarity=0.077  Sum_probs=118.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++++++||||+|+||.+++++|+++|++|+++.+......+......  ...++.++.+|+.++.            +.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999887653322222221111  1246888999998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .+|+||||||........    .++++++++|+.++.++++++.+    .+ .+||++||...+...          ...
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~  153 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG----------FGQ  153 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC----------CCC
Confidence            589999999975433222    34577899999999999999864    22 489999996543211          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++   ++++++++|+.+.
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~  190 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFID  190 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCc
Confidence            589999999888888887764   8999999998764

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=140.08  Aligned_cols=161  Identities=13%  Similarity=0.021  Sum_probs=114.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhc-cc-CCCCeEEEEcccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HF-GNPNFELIRHDVVEPLL------------L  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-~~-~~~~v~~~~~D~~~~~~------------~  179 (290)
                      +++++++||||+||||.+++++|+++|++|++++|+.....+.+.. +. ...++.++.+|++++..            .
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999998864322222111 11 13467889999987631            3


Q ss_pred             CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhh
Q 022900          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY  256 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~  256 (290)
                      ++|+||||||...  ....++...+++|+.++.++++++.+..   .+||++||........    .+..+ ...+|+.+
T Consensus        84 ~~d~vi~~ag~~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~~-~~~~Y~~s  156 (248)
T PRK07806         84 GLDALVLNASGGM--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTMP-EYEPVARS  156 (248)
T ss_pred             CCcEEEECCCCCC--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCCc-cccHHHHH
Confidence            6899999998532  2234566788999999999999998642   4899999964321111    11111 13589999


Q ss_pred             HHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          257 FFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       257 k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                      |...|.+++.+..+   .+++++++++.
T Consensus       157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg  184 (248)
T PRK07806        157 KRAGEDALRALRPELAEKGIGFVVVSGD  184 (248)
T ss_pred             HHHHHHHHHHHHHHhhccCeEEEEeCCc
Confidence            99999999888765   36666666654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.71  E-value=2.9e-16  Score=140.85  Aligned_cols=159  Identities=15%  Similarity=0.049  Sum_probs=117.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+ ....+...++. ...++..+.+|++++.            +.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986 33333222221 2346888999998762            246


Q ss_pred             CCEEEEcccCCCCC-CC-C---CChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV-HY-K---FNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~-~~-~---~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|++|||||..... .. +   +.+++++++|+.++..+++++.    +.+.+||++||.+.+....          ...
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  152 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL----------YRS  152 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------CCc
Confidence            89999999975321 11 1   2346688999999998888754    3345999999976553211          124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .|+.+|.+.+.+++.++.++   |+.+..+.|+.+
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v  187 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTI  187 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence            79999999999998888754   688888888765

>PRK06182 short chain dehydrogenase; Validated

Probab=99.71  E-value=1.9e-16  Score=141.88  Aligned_cols=155  Identities=14%  Similarity=-0.015  Sum_probs=113.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      ++|+++||||+|+||.+++++|+++|++|++++|+...    +.+.. ..+++++.+|++++.            ..++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~----l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK----MEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            46799999999999999999999999999999885422    22221 234788899998763            23699


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGL----AKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a----~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||.......    .++++.++++|+.|+.+++++    +++.+ .+||++||.+.+....          ....|
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y  146 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP----------LGAWY  146 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC----------CccHh
Confidence            99999997543221    234577899999997776665    45555 4899999965321110          11369


Q ss_pred             hhhHHHHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      +.+|.+.+.+.+.+..   .+|+++++++|+.+.
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  180 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIK  180 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcc
Confidence            9999988887776663   468999999999875

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.4e-16  Score=138.60  Aligned_cols=162  Identities=13%  Similarity=-0.000  Sum_probs=118.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|+.++.            +.+
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999999986433332222221 1346888899997763            246


Q ss_pred             CCEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||..... .    ..++++.++++|+.++.++++++.    +.+ .+||++||...+....         ...
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------~~~  154 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF---------PGM  154 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC---------CCc
Confidence            99999999974321 1    113456789999999998877653    333 4899999976553110         123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..|+.+|.+.+.+++.+..++   |+.+..+.|+.+.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  191 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTD  191 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCccc
Confidence            579999999999998888765   6888888887663

>PRK08264 short chain dehydrogenase; Validated

Probab=99.71  E-value=4.1e-16  Score=136.53  Aligned_cols=154  Identities=16%  Similarity=0.103  Sum_probs=117.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~v  184 (290)
                      ..+++|+||||+|+||.++++.|+++|+ +|++++|+.....+      ...++.++.+|+.++.        ...+|+|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            4668999999999999999999999999 99999986433222      2346888999998753        2358999


Q ss_pred             EEcccCC-CCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPA-SPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~-~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||+||.. ....    ..+++..++++|+.++.++++++.+    .+ .+||++||...|...          ....+|+
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~----------~~~~~y~  147 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF----------PNLGTYS  147 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC----------CCchHhH
Confidence            9999973 2221    1234566899999999999998653    33 389999997765421          1235799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|...+.+.+.+.+++   +++++++||+.+
T Consensus       148 ~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v  179 (238)
T PRK08264        148 ASKAAAWSLTQALRAELAPQGTRVLGVHPGPI  179 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcc
Confidence            99999988888887654   889999999876

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3e-16  Score=140.62  Aligned_cols=161  Identities=17%  Similarity=0.128  Sum_probs=119.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+....+.   ...++.++.+|+.++.            +
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999999999999999999999999986433222222221   1246888899998763            2


Q ss_pred             cCCCEEEEcccCCCCC--C---CCCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV--H---YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~--~---~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      .++|+||||||.....  .   ..+++..++++|+.++.++++++.+.    + .+|+++||...+...          .
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~  154 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH----------R  154 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC----------C
Confidence            3689999999964221  1   12235678999999999999876542    2 389999998775321          1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.+..++   +++++++||+.+.
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~  193 (276)
T PRK05875        155 WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIR  193 (276)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccC
Confidence            23689999999999999988765   5788888888664

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.9e-16  Score=137.48  Aligned_cols=160  Identities=13%  Similarity=-0.009  Sum_probs=115.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+|+++||||+|+||.++++.|+++|++|+++++......+.+....  ...++.++.+|+++..            ..
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999888764322222221111  2346888999998753            24


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||......    ...+++.++++|+.|+.++++++.+.    . .++|+++|...+....          ..
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----------~~  156 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----------DF  156 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----------Cc
Confidence            5899999999653322    12345678999999999999987642    2 3788888865543211          11


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF--RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+.+.+.+.+.+++  ++.++.++|+.+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v  191 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPT  191 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccc
Confidence            479999999999999988765  367777787654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.7e-16  Score=138.83  Aligned_cols=157  Identities=20%  Similarity=0.099  Sum_probs=117.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-------------ccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-------------LLEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-------------~~~vD  182 (290)
                      ||+++||||+|+||.++++.|+++|++|++++|+.....+... .....+++++.+|+.+..             ..++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-ELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-HhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            4789999999999999999999999999999986433222222 222457889999998752             34689


Q ss_pred             EEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCc-cccCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +||||||........    ++++.++++|+.++.++++++.+    .+ .+||++||.. +||..           ....
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~  148 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP-----------GLAV  148 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC-----------Cchh
Confidence            999999975433322    23567899999999999988743    33 4899999974 45532           1247


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..+   .++++.+++|+.+.
T Consensus       149 Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~  183 (260)
T PRK08267        149 YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVD  183 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcC
Confidence            999999888888888754   47888888887753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=5.7e-16  Score=136.48  Aligned_cols=161  Identities=14%  Similarity=0.007  Sum_probs=116.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +.+++++||||+|+||.++++.|+++|++|+++ +|+.....+...... ...++.++.+|++++.            +.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356799999999999999999999999998774 554322222222221 2356888999998774            13


Q ss_pred             CCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||........+    +...++++|+.++.++++++.+    .+ .+||++||...+..          ....
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------~~~~  151 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY----------LENY  151 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC----------CCCc
Confidence            5899999999653332222    2345788999999999998764    33 38999999755421          1123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|...+.+++.+..+   .+++++.++|+.++
T Consensus       152 ~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~  188 (250)
T PRK08063        152 TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVD  188 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCccc
Confidence            57999999999998888765   57899999998775

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.70  E-value=5e-16  Score=137.26  Aligned_cols=161  Identities=15%  Similarity=-0.003  Sum_probs=116.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|+.++.            ..+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999987544333222221 2356888999998763            236


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||........    .+.+.++++|+.++.++++.+.    +.+ .+||++||...+...          ....
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~~~  151 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS----------AGKA  151 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC----------CCcc
Confidence            89999999965433222    2345578899999777777654    344 489999997654211          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+..|...+.+++.+..+   .++++..+||+.+.
T Consensus       152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~  187 (258)
T PRK12429        152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVD  187 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCc
Confidence            7899998888888877665   37888888888764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=5.4e-16  Score=137.47  Aligned_cols=157  Identities=16%  Similarity=0.076  Sum_probs=114.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+++||||+|+||.++++.|+++|++|+++.+......+.+.    ..++.++.+|++++.            +.++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----hCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999988764322222221    125778899998763            2469


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||......    ..++++.++++|+.|+..+++++    ++.+ .+||++||...++...     +    ....
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----~----~~~~  151 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA-----E----GTTF  151 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-----C----CccH
Confidence            99999999753222    12345678999999987776664    3333 4899999987764211     1    1246


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.++.+   +|+++..++|+.+
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v  185 (255)
T PRK06463        152 YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWV  185 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCC
Confidence            999999999888888865   4788888888765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.70  E-value=3.6e-16  Score=137.89  Aligned_cols=159  Identities=14%  Similarity=0.031  Sum_probs=116.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      +++++||||+|+||.++++.|+++|++|++++|+....+....... ...++.++.+|+.++.            +.++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999986432222211111 2346888999998764            34589


Q ss_pred             EEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||........    .+.+.++++|+.|+.++++++.    +.+ .+||++||.+.+....          ...+|
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~----------~~~~y  150 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP----------FKSAY  150 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC----------CCchh
Confidence            999999975432221    2245678899999999988873    344 3899999976553211          12579


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|.+.+.+++.+..+   .+++++++||+.+.
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~  184 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVR  184 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            99998888888777665   38999999988764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.70  E-value=5.3e-16  Score=137.58  Aligned_cols=160  Identities=12%  Similarity=0.036  Sum_probs=118.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+++||||+|+||.+++++|+++|++|+++++..  ..+....+. ...++..+.+|+++..            +.
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999999999887642  122222221 1346788899998752            24


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||.......    .+++++++++|+.++.++++++.+    .+  .+||++||...+.....          
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  154 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----------  154 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----------
Confidence            69999999997533221    235677899999999999988643    22  38999999877642211          


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.+   +|+.+..++|+.+.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~  192 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMA  192 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence            237999999988888888766   47888888888764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.70  E-value=5e-16  Score=139.44  Aligned_cols=162  Identities=17%  Similarity=0.120  Sum_probs=119.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..++|+++||||+|+||.++++.|+++|++|++++|+....++....+. ...++.++.+|+.++.            +.
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999986433222222221 1346888999998763            24


Q ss_pred             CCCEEEEcccCCCCCCC-------------------CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcccc
Q 022900          180 EVDQIYHLACPASPVHY-------------------KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYG  235 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~-------------------~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg  235 (290)
                      ++|+||||||...+...                   .+++..++++|+.++..+++++.    +.+ .+||++||.+.|.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            69999999996433211                   23356789999999998777653    333 4899999987764


Q ss_pred             CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          236 DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       236 ~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..          .....|+.+|.+.+.+++.++.++   |+++..+.|+.+.
T Consensus       167 ~~----------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~  208 (278)
T PRK08277        167 PL----------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFL  208 (278)
T ss_pred             CC----------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCc
Confidence            21          122469999999999998888775   6888888887664

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.9e-16  Score=136.83  Aligned_cols=160  Identities=14%  Similarity=0.072  Sum_probs=119.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.... +....+. ...++.++.+|++++.            +.
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            46788999999999999999999999999999998865433 2222221 2346889999998763            13


Q ss_pred             CCCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          180 EVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ++|+||||||.......+   ++++..+++|+.++.++++++.+    .+.+||++||...+...          .....
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~~  152 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ----------GGTSG  152 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC----------CCCch
Confidence            689999999964332222   34566899999999999998753    22489999997654211          12357


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.+..+   +++++..++|+.+
T Consensus       153 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v  186 (258)
T PRK08628        153 YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEV  186 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc
Confidence            999999999999988764   4888899998865

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.70  E-value=8.2e-16  Score=137.69  Aligned_cols=157  Identities=16%  Similarity=-0.006  Sum_probs=114.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++++++||||+|+||.+++++|+++|++|++++|+.+...+.....   .++.++.+|++++.            ..++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999987543222211111   25778899998763            2468


Q ss_pred             CEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~----~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||........+    +..+++++|+.|+.++++++.    +.+. +||++||.+.+...          .....
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  149 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV----------PGMAT  149 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC----------CCCcc
Confidence            99999999754333222    346689999999999888764    3443 89999997654311          12246


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      |+.+|...+.+.+.+..+   .|+++++++|+.+
T Consensus       150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v  183 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFV  183 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcC
Confidence            899998777666666544   4899999998765

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.7e-16  Score=140.82  Aligned_cols=160  Identities=17%  Similarity=0.091  Sum_probs=117.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++++||||+|+||.++++.|+++|++|++++|+.....+...++....++..+.+|++++.            +.++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6789999999999999999999999999999999864333222222212345666779998763            2569


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |+||||||........    +++++++++|+.|+.++++++..    .+.+||++||.+.+....          ....|
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y  156 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP----------GMAAY  156 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC----------CchHH
Confidence            9999999975432222    23466899999999999998753    234899999987653221          12479


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +.+|...+.+++.+..+   .|+.+.++.|+.+
T Consensus       157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v  189 (296)
T PRK05872        157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWI  189 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcc
Confidence            99999988888877653   5888888888655

>PRK08643 acetoin reductase; Validated

Probab=99.69  E-value=5.7e-16  Score=137.19  Aligned_cols=158  Identities=16%  Similarity=0.109  Sum_probs=115.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      +|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999986433222222221 1346788999998763            24699


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                      +||||||.......    .++++.++++|+.++.++++++.+    .+  .+||++||... ++..           ...
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~  150 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP-----------ELA  150 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------CCc
Confidence            99999996432222    123466899999999988887643    22  48999999754 3322           135


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|...+.+++.++.+   .|+.++.++|+.+.
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  186 (256)
T PRK08643        151 VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVK  186 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCc
Confidence            7999999988888887764   47889999998763

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.6e-16  Score=136.23  Aligned_cols=163  Identities=12%  Similarity=-0.038  Sum_probs=118.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+.... .+....+. ...++..+.+|+.++.            +
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999864322 22222221 1346788899998763            3


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~  248 (290)
                      .++|+||||||......    ..+++++++++|+.+++.+++++.    +.+ .+||++||.+.+ +....         
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  155 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL---------  155 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC---------
Confidence            45899999999754322    123456789999999999888764    333 489999997643 22110         


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....|+.+|.+.+.+++.++.+   +|+++.+++|+.+.
T Consensus       156 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~  194 (254)
T PRK06114        156 LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTA  194 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCcc
Confidence            1246999999988888888764   47888888888653

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1e-15  Score=135.48  Aligned_cols=153  Identities=15%  Similarity=0.113  Sum_probs=114.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+...       .....++.++.+|+.++.            +.++
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            567999999999999999999999999999999986422       112346788999997763            2468


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----c-C-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----V-G-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~-~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||.......    ..++++++++|+.++.++++++.+    . + .+||++||...+...     .     ...
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~-----~~~  146 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----P-----GTA  146 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----C-----CCc
Confidence            999999996432221    123567899999999999998754    2 2 489999997654211     1     225


Q ss_pred             hhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQFR--PSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~l  283 (290)
                      +|+.+|.+.+.+++.+..+++  +.+..++|+.+
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v  180 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLV  180 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccc
Confidence            799999999999999988764  45556666654

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.69  E-value=9e-16  Score=135.72  Aligned_cols=161  Identities=13%  Similarity=0.010  Sum_probs=115.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhccc-CCCCeEEEEccccccc--------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHF-GNPNFELIRHDVVEPL--------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~v~~~~~D~~~~~--------------  177 (290)
                      .++|+++||||+|+||.+++++|+++|++|+++++.. ....+...++. ...++..+.+|+.+..              
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            3578999999999999999999999999998875322 22122111111 1335667788886542              


Q ss_pred             --c--cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 --L--LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 --~--~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                        +  .++|+||||||........    ++++.++++|+.|+..+++++.+..   .+||++||.+.+....        
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------  153 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--------  153 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC--------
Confidence              1  2699999999974322222    2356788999999999999876532   3899999987653211        


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                        ...+|+.+|.+.+.+++.++.++   |+++..+.|+.+.
T Consensus       154 --~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~  192 (252)
T PRK12747        154 --DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIK  192 (252)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCcc
Confidence              22579999999999898887754   7888888888663

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.69  E-value=9.9e-16  Score=136.52  Aligned_cols=157  Identities=15%  Similarity=0.133  Sum_probs=116.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+.....  ..++.++.+|+.++.            +.++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            56789999999999999999999999999999998643322222222  346888999998763            2468


Q ss_pred             CEEEEcccCCCCCC---CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCcc-ccCCCCCCCCCCCCCCCChh
Q 022900          182 DQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEV-YGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       182 D~vih~Ag~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~v-yg~~~~~~~~E~~~~~~~py  253 (290)
                      |++|||||......   ..+++++++++|+.++.++++++.+    .+.+||++||.+. ++..           ....|
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~Y  150 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------GRWLY  150 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CCchh
Confidence            99999999643222   2234567899999999999998653    2248999999754 3322           12469


Q ss_pred             hhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      +..|...+.+++.+..++   |+.+..++|+.+
T Consensus       151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~  183 (261)
T PRK08265        151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWT  183 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCc
Confidence            999999888888887664   788888887644

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.7e-16  Score=136.52  Aligned_cols=160  Identities=9%  Similarity=-0.072  Sum_probs=118.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|+++..            +.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            56899999999999999999999999999999986433222211111 1356888999998763            2359


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||......    ..++++.++++|+.++.++++++.    +.+ .+||++||...++...          ...+
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  154 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP----------QWGA  154 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC----------CccH
Confidence            99999999643222    123456689999999999888763    333 4899999988775321          2357


Q ss_pred             hhhhHHHHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      |+.+|...+.+.+.+..   ..|++++++||+.+.
T Consensus       155 Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~  189 (241)
T PRK07454        155 YCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVN  189 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCccc
Confidence            99999988888777664   358999999998764

>PLN00016 RNA-binding protein; Provisional

Probab=99.69  E-value=2.9e-16  Score=147.56  Aligned_cols=150  Identities=16%  Similarity=0.222  Sum_probs=110.8

Q ss_pred             CCCCEEEEE----cCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh------cccCCCCeEEEEcccccc--cc--c
Q 022900          114 RKGLRIVVT----GGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM------HHFGNPNFELIRHDVVEP--LL--L  179 (290)
Q Consensus       114 ~~~k~VlVT----GasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~v~~~~~D~~~~--~~--~  179 (290)
                      ..+++|+||    ||+||||.+|+++|+++|++|++++|..........      ..+....++++.+|+.+.  .+  .
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~  129 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGA  129 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccC
Confidence            345789999    999999999999999999999999987543211000      001123588888998762  22  3


Q ss_pred             CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHH
Q 022900          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      ++|+|||+++.                ++.++.+++++|++.|+ +||++||.++||.....+..|..  +.+|.. .|.
T Consensus       130 ~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~--~~~p~~-sK~  190 (378)
T PLN00016        130 GFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD--AVKPKA-GHL  190 (378)
T ss_pred             CccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC--cCCCcc-hHH
Confidence            69999999762                24468899999999986 99999999999977666666664  344544 566


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ..|.+    .++.+++++++|++++.+.
T Consensus       191 ~~E~~----l~~~~l~~~ilRp~~vyG~  214 (378)
T PLN00016        191 EVEAY----LQKLGVNWTSFRPQYIYGP  214 (378)
T ss_pred             HHHHH----HHHcCCCeEEEeceeEECC
Confidence            55554    3456999999999998765

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.7e-16  Score=138.39  Aligned_cols=154  Identities=11%  Similarity=-0.046  Sum_probs=113.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      +|+++||||+|+||.++++.|+++|++|++++|+....    .... ...++++.+|++++.            ..++|+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~----~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV----EALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47899999999999999999999999999998853222    1111 124677888987752            246999


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||||||.......    .++++.++++|+.|+.++++++..    ...+||++||.+.+....          ...+|+.
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~  145 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP----------FAGAYCA  145 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC----------CccHHHH
Confidence            9999997533222    234567899999999999998743    224899999965432110          1257999


Q ss_pred             hHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~  177 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIA  177 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccc
Confidence            999988888777654   69999999998874

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.1e-16  Score=137.85  Aligned_cols=160  Identities=13%  Similarity=0.073  Sum_probs=117.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc-----------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~-----------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....+.  ...++.++.+|++++.           +.+
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            578899999999999999999999999999999986433322222221  1346888999998763           246


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|++|||||.......    .+++++++++|+.+.+.+++++.    +.+ .+||++||.+.+....          ...
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~----------~~~  155 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP----------NIA  155 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC----------cch
Confidence            9999999997543222    23467789999999888877753    343 4899999987542110          124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .|+.+|.+.+.+.+.++.++   |+.+..+.|+.+
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v  190 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGII  190 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcC
Confidence            68889998888888887764   677788887765

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.4e-16  Score=136.02  Aligned_cols=160  Identities=16%  Similarity=0.071  Sum_probs=116.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhc-cc-CCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++++||||+|+||.+++++|+++|++|+++.+......+.... +. ...++.++.+|+++..            +.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999988876532221111111 11 1345788899998763            2468


Q ss_pred             CEEEEcccCCCCCC-C----CCChHHHHHHHHHHHHHHHHHHHHc------C--CeEEEEcCCc-cccCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH-Y----KFNPVKTIKTNVVGTLNMLGLAKRV------G--ARFLLTSTSE-VYGDPLQHPQKETYW  247 (290)
Q Consensus       182 D~vih~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~a~~~~------~--~riV~vSS~~-vyg~~~~~~~~E~~~  247 (290)
                      |+||||||...... .    .+++..++++|+.++.++++++.+.      +  .+||++||.+ +|+.+.         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------  152 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------
Confidence            99999999754322 1    1234578999999999999887542      1  2699999975 455321         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                       ....|+.+|.+.+.+++.+..++   +++++++||+.+..
T Consensus       153 -~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~  192 (248)
T PRK06123        153 -EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYT  192 (248)
T ss_pred             -CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccC
Confidence             11359999999999998888764   89999999998864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.1e-15  Score=134.03  Aligned_cols=161  Identities=12%  Similarity=0.015  Sum_probs=117.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+....+. ...++.++.+|+.++.            +.+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999986433322222221 2346888999997663            246


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    ..++++++++|+.++.++++++.+    .+ .++|++||...+...          ....
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~  154 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA----------AVTS  154 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC----------CCCc
Confidence            9999999997543221    123466799999999999998753    33 489999997654221          1234


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.+..+   .|++++++||+.+.
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~  190 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVA  190 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence            6899998888777777644   58999999998765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.3e-16  Score=135.42  Aligned_cols=159  Identities=15%  Similarity=0.100  Sum_probs=117.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------ccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++||||+|+||.+++++|+++|++|++++|+....++......   ...+++++.+|++++.            +.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999986433332222111   2346889999998763            346


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~  250 (290)
                      +|++|||||.......    .+.+..++++|+.++.++++++.    +.+ .+||++||... +|.+          .+.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~  151 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP----------GVK  151 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC----------CCc
Confidence            9999999997543322    22346689999999999998864    334 48999999654 4422          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++   +++++.++++.+.
T Consensus       152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~  188 (248)
T PRK08251        152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIR  188 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCc
Confidence            579999998888888877654   6788888888764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=8.9e-16  Score=136.94  Aligned_cols=160  Identities=10%  Similarity=0.003  Sum_probs=120.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++++.            +.+
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            567899999999999999999999999999999876433332222221 1346888999998763            245


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCc-cccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.......    .+++.+++++|+.|+..+++++..    .+ .+||++||.. .++..           ..
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~  156 (265)
T PRK07097         88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE-----------TV  156 (265)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC-----------CC
Confidence            8999999997543322    234566899999999988887643    33 4899999964 34321           23


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+..|.+.+.+++.+.+++   |+.+..++|+.+.
T Consensus       157 ~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~  193 (265)
T PRK07097        157 SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIA  193 (265)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccc
Confidence            579999999999898888765   8999999998874

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.1e-16  Score=134.81  Aligned_cols=161  Identities=15%  Similarity=0.035  Sum_probs=117.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ..+++|+||||+|+||.+++++|+++|++|++++|+.....+....+....+++++.+|+.+..            +.++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3468999999999999999999999999999999864333332222222256888999997663            2369


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc---C-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |+||||||.......    .+++.+++++|+.++.++++++.+.   + .+||++||.+.+...          .....|
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~~y  153 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF----------AGGAAY  153 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC----------CCCchH
Confidence            999999996533221    2234578999999999999887542   2 479999997654311          123468


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|.+.+.+++.+..+   .|++++++|++.+.
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~  187 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVA  187 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeecccc
Confidence            99998888877777543   58999999998763

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.1e-16  Score=136.12  Aligned_cols=155  Identities=13%  Similarity=0.036  Sum_probs=114.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc---------cCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL---------LEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---------~~vD~vih  186 (290)
                      +++++||||+|+||.+++++|+++|++|++++|+.+...+...   ...++.++.+|++++..         ..+|.+||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            3689999999999999999999999999999986432222111   12467888999987641         23799999


Q ss_pred             cccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCc-cccCCCCCCCCCCCCCCCChhhhhHH
Q 022900          187 LACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       187 ~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~-vyg~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      |||......    ..+++++++++|+.|+.++++++...   +.++|++||.. .++..           ...+|+.+|.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y~asK~  146 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP-----------RAEAYGASKA  146 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC-----------CCchhhHHHH
Confidence            998542211    11234678999999999999998753   45899998864 33321           1247999999


Q ss_pred             HHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          259 SFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       259 ~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      ..+.+++.+..   .+|+++++++|+.+.
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~  175 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVA  175 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCC
Confidence            99888888774   458999999998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.8e-16  Score=136.25  Aligned_cols=161  Identities=12%  Similarity=0.016  Sum_probs=119.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+|+||||+|+||.++++.|+++|++|++++|+....++....+. ...++.++.+|++++.            +.+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            667999999999999999999999999999999886433222222111 1346788999997652            236


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----c---------CCeEEEEcCCccccCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----V---------GARFLLTSTSEVYGDPLQHPQK  243 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~---------~~riV~vSS~~vyg~~~~~~~~  243 (290)
                      +|+||||||.......    ..+++.++++|+.++.++++++..    .         +.++|++||...+...      
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  160 (258)
T PRK06949         87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL------  160 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC------
Confidence            8999999996433221    234667899999999999988652    1         2389999998765311      


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                          ....+|+.+|...+.+++.+..+   +++++++++|+.+.
T Consensus       161 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~  200 (258)
T PRK06949        161 ----PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYID  200 (258)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCc
Confidence                12358999999988888888765   48999999998874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.69  E-value=1.2e-15  Score=136.05  Aligned_cols=153  Identities=18%  Similarity=0.136  Sum_probs=116.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++++.....        ..++.++.+|++++.            +.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999987543221        236778899998763            246


Q ss_pred             CCEEEEcccCCCCCC-------------CCCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCC
Q 022900          181 VDQIYHLACPASPVH-------------YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~  242 (290)
                      +|+||||||...+..             ..++++.++++|+.++.++++++.+.    + .+||++||...+....    
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  153 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE----  153 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC----
Confidence            899999999643211             12335668999999999999987642    2 3899999976543211    


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                            ...+|+.+|.+.+.+++.+..+   +|+.+..+.|+.+
T Consensus       154 ------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~  191 (266)
T PRK06171        154 ------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGIL  191 (266)
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence                  1257999999988888888765   4788888988876

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=1e-15  Score=135.59  Aligned_cols=160  Identities=13%  Similarity=0.042  Sum_probs=118.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +.+|+++||||+|+||.+++++|+++|++|++++|+.....+...++. ...++..+.+|+.++.            +.+
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999986433333222221 1346778889998763            245


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||......    ..+++++++++|+.++.++++++.+    .+ .+||++||... ++..           ..
T Consensus        87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~  155 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD-----------TI  155 (254)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC-----------CC
Confidence            899999999643222    1234567899999999999988654    33 48999999753 3221           23


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..+   +|+++..++|+.+.
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~  192 (254)
T PRK08085        156 TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFK  192 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCC
Confidence            57999999999888888765   48889999987663

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.69  E-value=9.1e-16  Score=136.26  Aligned_cols=159  Identities=12%  Similarity=0.104  Sum_probs=119.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+ . ..+...+..  ...++.++.+|+.++.            +.
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-T-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-c-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999886 2 222222221  2346889999998763            23


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|++|||||.......    ..++++.+++|+.++.++++++.+    .+ .+||++||...+....          ..
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  160 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK----------FV  160 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC----------Cc
Confidence            68999999997533221    224567899999999999887643    33 4899999987653211          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+++++   |+++..++|+.+.
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~  197 (258)
T PRK06935        161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIK  197 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccc
Confidence            479999999999999988764   7888889888763

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=135.30  Aligned_cols=158  Identities=11%  Similarity=0.029  Sum_probs=116.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      +++|+||||+|+||.++++.|+++|++|++++|+....++....+. ...++.++.+|+.++.            +.++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999986432222221111 2346888899998763            23689


Q ss_pred             EEEEcccCCCCCCCCCC-----hHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHYKFN-----PVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~-----~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||........+.     +.+.+++|+.++.++++.+.+    ...++|++||...|...          ....+|
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y  150 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV----------PTRSGY  150 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC----------CCccHH
Confidence            99999997543332222     456799999999999998753    33589999998766421          123579


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +.+|...+.+++.+...   .++++++++|+.+
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v  183 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFV  183 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCcc
Confidence            99999888888777653   4888999998765

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.68  E-value=8.3e-16  Score=137.09  Aligned_cols=160  Identities=13%  Similarity=0.036  Sum_probs=116.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++++++||||+|+||.++++.|+++|++|++++|+.+...+....+. ...++.++.+|++++.            +.+
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986433222222221 1346888999998764            246


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH-----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR-----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~-----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||........    +++..++++|+.++.++++++.+     .+ .+||++||..-+...          ...
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~~~  157 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG----------RGF  157 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC----------CCC
Confidence            99999999964332222    34567899999999999999863     23 489999996432110          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF--RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+.+.+++.+..++  ++.+..+.|+.+
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v  192 (263)
T PRK07814        158 AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSI  192 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCC
Confidence            589999999999999888875  345556666654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.68  E-value=1.2e-15  Score=135.31  Aligned_cols=157  Identities=17%  Similarity=0.075  Sum_probs=116.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------ccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +|+|+||||+|+||.++++.|+++|++|++++|+.....+....+.   +..++.++.+|++++.            +.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999986443332222211   1246889999998752            246


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCc-cccCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSE-VYGDPLQHPQKETYWGN  249 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~-vyg~~~~~~~~E~~~~~  249 (290)
                      +|+||||||........    .+++..+++|+.|+.++++++.+    .+  .+||++||.+ .+|..           .
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-----------~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK-----------H  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------C
Confidence            89999999975443322    23466789999999988887643    34  3899999864 44421           2


Q ss_pred             CChhhhhHHHHHHHHHHHHH---HhCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFIS---QFRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+++.+..   .+|+++..+|++.+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~  187 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNL  187 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCc
Confidence            25799999998888888775   46999999999864

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.3e-16  Score=136.36  Aligned_cols=158  Identities=15%  Similarity=0.064  Sum_probs=112.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc-cCCCCeEEEEccccccc-----c-cCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----L-LEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~-----~-~~vD~vih~A  188 (290)
                      +++|+||||+|+||.++++.|+++|++|++++|+.....+..... ....++.++.+|+.++.     + .++|+|||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            468999999999999999999999999999988532221111111 12345888899998763     2 2799999999


Q ss_pred             cCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHH
Q 022900          189 CPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFS  259 (290)
Q Consensus       189 g~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~  259 (290)
                      |........    ++++..+++|+.++.++++++    ++.+ .+||++||...+...          ....+|+.+|..
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------~~~~~Y~~sK~a  151 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------PFTGAYCASKHA  151 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------CCcchhHHHHHH
Confidence            975432222    234567899999988877754    3444 489999997543211          022579999999


Q ss_pred             HHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          260 FSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       260 ~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      .+.+++.+...   .|++++++||+.+
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~  178 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPY  178 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence            88888777654   5999999998765

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-15  Score=134.13  Aligned_cols=157  Identities=17%  Similarity=0.087  Sum_probs=116.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++++++||||+|+||.++++.|+++|++|++++|+.+...+    ......+.++.+|+.+..        ..++|+||
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR----LAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            567899999999999999999999999999999885422221    111123567788887753        23589999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||||.......    ..++++++++|+.++.++++++.+    .+  .+||++||...|....          ...+|+.
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~y~~  152 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------DHLAYCA  152 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----------CCcHhHH
Confidence            99997532221    234566788999999999998754    22  4899999986653211          2357999


Q ss_pred             hHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|.+.+.+++.+..+   +++++..+||+.+.
T Consensus       153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~  184 (245)
T PRK07060        153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTL  184 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCC
Confidence            999999988888765   47999999998775

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.4e-16  Score=136.10  Aligned_cols=161  Identities=13%  Similarity=0.041  Sum_probs=115.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc----c-CCCCeEEEEccccccc-----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH----F-GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~v~~~~~D~~~~~-----------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|+++++......+...+.    . ...++.++.+|++++.           
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999888776543332222211    1 1346888999998662           


Q ss_pred             -ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                       +.++|++|||||......    ..+++++++++|+.++.++++++.+.   +.++++++|+......   +       .
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~---~-------~  155 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT---P-------F  155 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC---C-------C
Confidence             246999999999743222    12345678999999999999998653   2366666433322111   0       1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...|+.+|.+.+.+++.++.++   |++++.++|+.+.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~  193 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMD  193 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccc
Confidence            2579999999999999998875   5888888888763

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=132.77  Aligned_cols=149  Identities=15%  Similarity=0.052  Sum_probs=113.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-----------cCCCE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-----------LEVDQ  183 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-----------~~vD~  183 (290)
                      .+|+|+||||+|+||.+++++|+++|++|++++|.....          ...+++.+|++++..           .++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   71 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------FPGELFACDLADIEQTAATLAQINEIHPVDA   71 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence            357899999999999999999999999999999864321          112467788876631           25899


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||||.......    .+++.+++++|+.++.++++++.    +.+ .+||++||.++|+..           ...+|.
T Consensus        72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~Y~  140 (234)
T PRK07577         72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-----------DRTSYS  140 (234)
T ss_pred             EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-----------CchHHH
Confidence            9999997544332    23456689999999999877753    344 389999998877532           125799


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|...+.+++.+..+   +|+.+++++|+.+.
T Consensus       141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~  173 (234)
T PRK07577        141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIE  173 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEecCccc
Confidence            9999988888877654   48999999998764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.2e-15  Score=134.80  Aligned_cols=160  Identities=16%  Similarity=0.078  Sum_probs=118.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....+. .+.++.++.+|+++..            +.+
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999986433222222221 2346888999997652            246


Q ss_pred             CCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||......     ..+++++++++|+.++.++++++.    +.+ .+||++||...++...          ..
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------~~  154 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP----------KM  154 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC----------CC
Confidence            899999999743222     223456789999999988877643    333 3899999987664221          23


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ..|+.+|.+.+.+++.+..++   |+++..+.|+.+
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v  190 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVI  190 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCc
Confidence            579999999999998888765   678888888765

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-15  Score=134.97  Aligned_cols=160  Identities=16%  Similarity=0.037  Sum_probs=115.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+. ...++.++.+|+.+..            +.+
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986433222222221 1345778889997663            245


Q ss_pred             CCEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||..... .    ..++++..+++|+.++.++++++.    +.+ .+|+++||...+...          ...
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~  155 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG----------DFQ  155 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC----------CCC
Confidence            89999999953211 1    122356789999999999888763    333 489999986443211          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+.+.+++.+..++   |++++.+.|+.+
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v  191 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLT  191 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccc
Confidence            579999999999999988764   788888888755

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.68  E-value=1.9e-15  Score=133.38  Aligned_cols=152  Identities=14%  Similarity=0.053  Sum_probs=116.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.      ..  ....++.++.+|++++.            +.++
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999999999999999999999999999998854      11  12346888999997663            2358


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||......    ..+++..++++|+.++.++++++..    .+ .+||++||.......          ....+
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~  147 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR----------IGMAA  147 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC----------CCCch
Confidence            99999999754322    1234567899999999999998743    33 489999997543211          12357


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      |+.+|...+.+++.+..+   +++++++++|+.+
T Consensus       148 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v  181 (252)
T PRK08220        148 YGASKAALTSLAKCVGLELAPYGVRCNVVSPGST  181 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcC
Confidence            999999999988888876   6899999998865

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.2e-15  Score=133.25  Aligned_cols=158  Identities=19%  Similarity=0.126  Sum_probs=117.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++|+||||+|+||.++++.|+++|++|++++|+...  ..........++.++.+|++++.            +.++
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV--AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            567899999999999999999999999999999986432  11111223346778899997663            2368


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||.......    .+++..++++|+.|+.++++++.+    .+ .+||++||... ++..           ...
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~  159 (255)
T PRK06841         91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE-----------RHV  159 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC-----------CCc
Confidence            999999997533222    123456899999999999998754    23 48999999753 4422           124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       160 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~  195 (255)
T PRK06841        160 AYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVL  195 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCc
Confidence            79999999888888887764   7888888887653

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.4e-15  Score=134.19  Aligned_cols=160  Identities=14%  Similarity=0.068  Sum_probs=113.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC-
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE-  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~-  180 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++++.....+.+.... ..++.++.+|+.++.            +.+ 
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            456899999999999999999999999999887653222212222211 246888899997753            123 


Q ss_pred             CCEEEEcccCCCC------C-C---CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCC
Q 022900          181 VDQIYHLACPASP------V-H---YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       181 vD~vih~Ag~~~~------~-~---~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      +|++|||||....      . .   ..+++.+++++|+.++.++++++.+    .+ .+||++||.....          
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------  151 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----------  151 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence            9999999985311      0 1   1123466899999999999999853    33 3899999854321          


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+..+|+.+|.+.+.+++.+++++   |+.+..++|+.+.
T Consensus       152 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~  193 (253)
T PRK08642        152 PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLR  193 (253)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccC
Confidence            11234589999999999999998764   6777777776653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.68  E-value=2.6e-15  Score=138.21  Aligned_cols=162  Identities=12%  Similarity=0.059  Sum_probs=116.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccc----------ccc--
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEP----------LLL--  179 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~----------~~~--  179 (290)
                      .++.++||||+|+||.+++++|+++|++|++++|+.+..++...++.   ...++..+.+|+.+.          .+.  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999987544333222221   124577778888742          112  


Q ss_pred             CCCEEEEcccCCCCC--CC-C---CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPV--HY-K---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~--~~-~---~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|++|||||...+.  .. +   ++.++++++|+.|+.++++++.    +.+ .+||++||.+.+..+. .|       
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~p-------  203 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-DP-------  203 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-Cc-------
Confidence            366999999975321  11 1   2345689999999999999864    334 4899999976542110 00       


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+.+.+..++   |+++..+.|+.+.
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~  242 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVA  242 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCcee
Confidence            13579999999988888888764   7888888888764

>PRK12742 oxidoreductase; Provisional

Probab=99.68  E-value=1.5e-15  Score=132.70  Aligned_cols=158  Identities=13%  Similarity=0.038  Sum_probs=113.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++|+|+||||+|+||.++++.|+++|++|+++.+....   ....+.....+.++.+|++++.        ..++|++|
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD---AAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH---HHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            567899999999999999999999999999887653221   1111111123567788887653        24589999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHH
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      ||||.......    .++++.++++|+.++.++++.+.+.   +.+||++||.....    .+     .....+|+.+|.
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~-----~~~~~~Y~~sKa  151 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----MP-----VAGMAAYAASKS  151 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----CC-----CCCCcchHHhHH
Confidence            99997532221    2345778999999999998776553   34899999965311    01     113358999999


Q ss_pred             HHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          259 SFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       259 ~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +.+.+++.++.+   .|+.+++++|+.+
T Consensus       152 a~~~~~~~la~~~~~~gi~v~~v~Pg~~  179 (237)
T PRK12742        152 ALQGMARGLARDFGPRGITINVVQPGPI  179 (237)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCcc
Confidence            999888888765   4788888888765

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=134.90  Aligned_cols=159  Identities=12%  Similarity=0.051  Sum_probs=115.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      +|+++||||+|+||.++++.|+++|++|++++|+.....+...... ...++.++.+|++++.            +.++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4789999999999999999999999999999986433322222221 1346889999998763            24689


Q ss_pred             EEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +||||||......    ..+++++++++|+.|++++++++.+    .+  .+||++||...+...          ....+
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------PGVIH  150 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------CCCcc
Confidence            9999998643211    1233577899999999999998843    22  389999987533211          02247


Q ss_pred             hhhhHHHHHHHHHHHHHH----hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ----FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~----~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.+    +|+++..++|+.+.
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~  186 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIE  186 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccc
Confidence            999999988888876655    47888888888775

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=134.96  Aligned_cols=159  Identities=19%  Similarity=0.190  Sum_probs=116.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++++||||+|+||.++++.|+++|++|++++|+.....+.... ....++.++.+|++++.            +.++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR-LPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5678999999999999999999999999999999864333222211 12236788999998764            2469


Q ss_pred             CEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCcc-ccCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEV-YGDPLQHPQKETYWGN  249 (290)
Q Consensus       182 D~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~v-yg~~~~~~~~E~~~~~  249 (290)
                      |+|||+||...+..     ..+++..++++|+.++.++++++.    ..+  .+|+++||.+. +|.+           .
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~-----------~  156 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYP-----------G  156 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCC-----------C
Confidence            99999999752221     123457789999999999998873    232  35788877543 3321           1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+..|.+.+.+++.+..+.   +++++++||+++.
T Consensus       157 ~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~  194 (264)
T PRK12829        157 RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVR  194 (264)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcC
Confidence            2469999998888888887654   8999999999873

>PRK09242 tropinone reductase; Provisional

Probab=99.67  E-value=1.3e-15  Score=135.20  Aligned_cols=160  Identities=10%  Similarity=0.023  Sum_probs=119.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.+...+...++.   ...++..+.+|+.++.            +
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            568899999999999999999999999999999986433322222221   2346888999997752            3


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||......    ..+++++.+++|+.++.++++++.    +.+ .+||++||.+.+....          .
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------~  156 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR----------S  156 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC----------C
Confidence            56999999999642211    223456789999999999998874    333 4899999987654221          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..+|+.+|...+.+++.++.+   .++++..++|+.+
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i  193 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYI  193 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCC
Confidence            357999999888888887754   4788889988765

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.9e-15  Score=132.08  Aligned_cols=153  Identities=12%  Similarity=-0.005  Sum_probs=115.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~vD~vih~  187 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+....        ...++.++.+|+.++      .+.++|+||||
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--------cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            5678999999999999999999999999999998853221        124678889999775      23579999999


Q ss_pred             ccCCCC--CC---CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhH
Q 022900          188 ACPASP--VH---YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYF  257 (290)
Q Consensus       188 Ag~~~~--~~---~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k  257 (290)
                      ||....  ..   ..+++++++++|+.|+.++++++..    .+ .+||++||.+.+....          ....|+..|
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~sK  144 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG----------GGAAYTASK  144 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------CCcccHHHH
Confidence            996421  11   1234567899999999999998753    33 4899999976542111          124699999


Q ss_pred             HHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          258 FSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       258 ~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+.+++.++.++   |+++++++|+.+.
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~  174 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVK  174 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCcc
Confidence            88888888877765   8899999998763

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=132.89  Aligned_cols=161  Identities=16%  Similarity=0.083  Sum_probs=118.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+...+. ....++++.+|+.+..            +.++
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV-PADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHH-hhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            46789999999999999999999999999999998754433333322 2235677788887642            3469


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+|||+||.......    .+++.+.+++|+.++.++++++.+    .+ .+||++||...|+..          ....+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  153 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG----------PGMGA  153 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC----------CCcch
Confidence            999999996432221    122456788999999999998753    33 489999998877532          12357


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      |+.+|...+.+++.+.+.   .++++.++|++.+.-
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~  189 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDT  189 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence            888998887777777654   489999999987743

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.67  E-value=2e-15  Score=132.00  Aligned_cols=159  Identities=16%  Similarity=0.103  Sum_probs=116.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++|+||||+|+||.++++.|+++|++|++++|+............ ...++.++.+|+.++.            +.+
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999986433322222221 2346888899998763            245


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~  250 (290)
                      +|+|||+||.......    .+++...+++|+.++.++++++.    +.+ .+||++||... ++.           .+.
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~-----------~~~  151 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN-----------PGQ  151 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC-----------CCC
Confidence            7999999997543221    12346679999999999999884    344 49999999753 321           133


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      .+|...|...+.+++.+.++   .+++++++||+.+
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~  187 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFI  187 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCc
Confidence            57899998888888887764   4788889998765

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.1e-15  Score=134.42  Aligned_cols=158  Identities=11%  Similarity=0.049  Sum_probs=115.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEcccccccc---------cCCCEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPLL---------LEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~---------~~vD~v  184 (290)
                      ||+|+||||+|+||.++++.|+++|++|++++|+.+...+......  ...+++++.+|+.++..         .++|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            4689999999999999999999999999999987543332222211  23578999999987631         247999


Q ss_pred             EEcccCCCCCCC-C---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~~~~~~-~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~py~  254 (290)
                      |||||....... +   +++.+++++|+.++.++++++.+    .+ .+||++||... ++..           ...+|+
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~  149 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA-----------SNYVYG  149 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC-----------CCcccH
Confidence            999996533222 1   23356799999999999988654    33 48999998643 2211           124799


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+++.+..+   .|+++..++++.+.
T Consensus       150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~  182 (243)
T PRK07102        150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVR  182 (243)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence            9999988888888653   47889999888764

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=141.05  Aligned_cols=161  Identities=11%  Similarity=0.000  Sum_probs=116.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++++|+||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.+
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            567899999999999999999999999999999986433322222221 2346888999998763            346


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|++|||||.......    .++.+.++++|+.|+.++++++    ++.+ .+||++||...|....          ...
T Consensus        86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~----------~~~  155 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP----------LQS  155 (334)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC----------cch
Confidence            9999999997533221    2234668999999988876665    4443 4899999988774221          125


Q ss_pred             hhhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF-----RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~lr  284 (290)
                      +|+.+|...+.+.+.+..++     ++.+++++|+.+.
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~  193 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVN  193 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCcc
Confidence            79999998888887776553     5778888877653

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.5e-15  Score=133.26  Aligned_cols=160  Identities=18%  Similarity=0.074  Sum_probs=116.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++++++||||+|+||+++++.|+++|++|+++.++.....+.. .... ...++.++.+|+.+..            +.
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999988876533221211 1111 2356889999998753            24


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ++|+||||||......    ...+++.++++|+.++.++++++.+..   .+||++||...+...          ....+
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~~  152 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL----------PGYGP  152 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC----------CCCch
Confidence            6999999999643222    123456789999999999999886542   389999986554211          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      |+..|...+.+++.+..++   ++.+++++|+.+
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~  186 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPV  186 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCc
Confidence            9999999998888887654   677888888754

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.2e-15  Score=135.15  Aligned_cols=162  Identities=12%  Similarity=0.015  Sum_probs=117.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.+..++....+. ...++..+.+|++++.            +.+
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            568899999999999999999999999999999886433322222221 1346788899998763            247


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|++|||||.......    .+++++++++|+.++.++++++.+    .+  .+||++||.+..-..  .  .    ...
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~--~----~~~  158 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--V--P----QQV  158 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--C--C----CCc
Confidence            9999999997543221    233566789999999999998643    32  379999886532100  0  0    112


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ..|+.+|.+.+.+++.+..++   |+.+..+.|+.+
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v  194 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYI  194 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCC
Confidence            479999999999888887654   788888888766

>PRK12743 oxidoreductase; Provisional

Probab=99.67  E-value=2.6e-15  Score=133.27  Aligned_cols=159  Identities=11%  Similarity=-0.013  Sum_probs=115.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+||||+|+||.+++++|+++|++|+++.+......+.+ ..+. ...++.++.+|+.+..            +.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999998865432222111 1111 2357889999998753            2468


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||.......    .+++++++++|+.++.++++++.+    .+  .+||++||.....          ...+..
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------~~~~~~  151 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT----------PLPGAS  151 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC----------CCCCcc
Confidence            999999997543221    234567899999999999988653    22  4899999964321          111235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .|+..|...+.+++.++.+   .++.++.++|+.+.
T Consensus       152 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~  187 (256)
T PRK12743        152 AYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIA  187 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCcc
Confidence            7999999988888888765   47889999988764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.2e-15  Score=134.82  Aligned_cols=158  Identities=15%  Similarity=0.041  Sum_probs=116.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCCE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      |+|+||||+|+||.+++++|+++|++|++++|+.+...+....+. ...++.++.+|++++.            ..++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999986543333222221 2346888999998753            246999


Q ss_pred             EEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||||.........    +++.++++|+.++.++++++    ++.+ .+||++||...+....          ....|+
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y~  150 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP----------AMSSYN  150 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC----------CchHHH
Confidence            999999754433222    34567899999999987774    4455 4899999986653211          225799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       151 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  183 (270)
T PRK05650        151 VAKAGVVALSETLLVELADDEIGVHVVCPSFFQ  183 (270)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence            99998888887777764   7889999988763

>PRK05855 short chain dehydrogenase; Validated

Probab=99.67  E-value=1.2e-15  Score=149.95  Aligned_cols=162  Identities=13%  Similarity=0.024  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ...+++++||||+|+||.+++++|+++|++|++++|+.....+....+. ...++.++.+|++++.            .+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3567899999999999999999999999999999986433332222221 1346889999998863            23


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||........    +++..++++|+.|+.++++++.    +.+  .+||++||.+.|....          .
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~  461 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR----------S  461 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------C
Confidence            589999999975433222    3456789999999999988753    333  4899999998875321          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..+   +|+.++.+.|+.+.
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  499 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVD  499 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCc
Confidence            358999999988888887765   48889999988764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.67  E-value=2.8e-15  Score=132.90  Aligned_cols=160  Identities=15%  Similarity=0.071  Sum_probs=117.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+.....+...... ...++.++.+|+++..            +.+
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999999999876433222222111 1346788899998763            246


Q ss_pred             CCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|++|||||...+....   ++++..+++|+.++.++++++..    .+ .+||++||.+.....          ....+
T Consensus        89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~  158 (255)
T PRK06113         89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------INMTS  158 (255)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCcch
Confidence            89999999975433332   33556799999999999999753    33 389999997643111          12347


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.++.+   .|+.+.++.|+.+
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~  192 (255)
T PRK06113        159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI  192 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccc
Confidence            999999999999888764   4677777777765

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.6e-15  Score=132.56  Aligned_cols=161  Identities=14%  Similarity=0.071  Sum_probs=112.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCC-chhhhhccc--CCCCeEEEEccccccc-----------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTG-RKENVMHHF--GNPNFELIRHDVVEPL-----------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~-~~~~~~~~~--~~~~v~~~~~D~~~~~-----------~  178 (290)
                      .++++|+||||+|+||.+++++|+++| ++|++++|+.+. ..+...++.  ...+++++.+|++++.           .
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            356799999999999999999999995 899999987654 332222221  2336889999997653           1


Q ss_pred             cCCCEEEEcccCCCCCC-CCCCh---HHHHHHHHHHHHHHHH----HHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH-YKFNP---VKTIKTNVVGTLNMLG----LAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~-~~~~~---~~~~~~Nv~gt~~ll~----a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|++|||+|...+.. ...++   .+++++|+.++.++++    ++++.+ .+||++||...+...          ..
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~----------~~  155 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR----------RS  155 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------CC
Confidence            36999999999753321 11122   2469999999987544    455555 499999997543210          12


Q ss_pred             CChhhhhHHHHHHHHHHHH---HHhCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFI---SQFRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~---~~~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+...+.+.+.   ..+++++++++|+.++
T Consensus       156 ~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~  193 (253)
T PRK07904        156 NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVR  193 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCcee
Confidence            2469999988766555554   3468999999999874

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=3.1e-15  Score=132.67  Aligned_cols=161  Identities=14%  Similarity=0.018  Sum_probs=117.0

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCC--------chhh--h-hccc-CCCCeEEEEccccccc--
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTG--------RKEN--V-MHHF-GNPNFELIRHDVVEPL--  177 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~--------~~~~--~-~~~~-~~~~v~~~~~D~~~~~--  177 (290)
                      .++++|+||||+|  +||.++++.|+++|++|++++|+...        ..+.  + .... ...+++++.+|++++.  
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4678999999995  79999999999999999999886210        1111  1 1111 1346889999998753  


Q ss_pred             ----------ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCC
Q 022900          178 ----------LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPL  238 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~  238 (290)
                                +.++|+||||||........    .+++.++++|+.|+.++++++.+.    + .+||++||...++...
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  162 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP  162 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence                      24689999999975332221    234667999999999999998643    2 3899999987664221


Q ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          239 QHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       239 ~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                                ....|+.+|.+.+.+++.++.+   .++.++.++|+.+.
T Consensus       163 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~  201 (256)
T PRK12748        163 ----------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTD  201 (256)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCccc
Confidence                      1247999999999988888765   47889999988653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=3.6e-15  Score=131.40  Aligned_cols=161  Identities=14%  Similarity=-0.008  Sum_probs=116.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++++|+||||+|+||++++++|+++|++|+++.+...... +...... ...++.++.+|++++.            +.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999988765432211 1111111 1235778888997663            24


Q ss_pred             CCCEEEEcccCCCCCCCC-C---ChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          180 EVDQIYHLACPASPVHYK-F---NPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~-~---~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ++|+||||||........ .   ..++++++|+.++.++++++.+.   ..+||++||.+.|...          .+..+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  153 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA----------YGLSI  153 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC----------CCchH
Confidence            689999999974433222 1   23567899999999999988653   2489999998876421          13368


Q ss_pred             hhhhHHHHHHHHHHHHHHh--CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF--RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~lr  284 (290)
                      |+.+|...+.+++.+.+++  ++.+.+++|+.++
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~  187 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVK  187 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence            9999999999999998876  5777788886553

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.67  E-value=2.4e-15  Score=131.90  Aligned_cols=157  Identities=13%  Similarity=0.053  Sum_probs=113.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++++||||+|+||.++++.|+++|+.|++.+|+.....+.....  ..++.++.+|+.+..            +.++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999988876533222221111  246788899997653            3469


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCc-cccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||......    ...+++.++++|+.++.++++++.+    .+ .+||++||.. .|+.+.           ..
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------~~  150 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG-----------QA  150 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC-----------Cc
Confidence            99999999754322    1234567899999999999888643    23 4899999964 454321           24


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      .|+.+|.+.+.+++.+..+   .+++++.++|+.+
T Consensus       151 ~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~  185 (245)
T PRK12936        151 NYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFI  185 (245)
T ss_pred             chHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcC
Confidence            6899998877777766654   4788888888754

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.67  E-value=1.8e-15  Score=127.36  Aligned_cols=144  Identities=24%  Similarity=0.303  Sum_probs=106.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCCCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPASP  193 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~~~  193 (290)
                      |+|+||||++|+.++++|+++|++|+++.|+.....+       ..+++++.+|+.++.     +.++|+|||+++....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence            7999999999999999999999999999986432222       578999999998773     5689999999975322


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR  272 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g  272 (290)
                                   +...+.+++++|++.++ ++|++||.++|+........+.. .....|...+...|    .+.++.+
T Consensus        74 -------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e----~~~~~~~  135 (183)
T PF13460_consen   74 -------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDK-PIFPEYARDKREAE----EALRESG  135 (183)
T ss_dssp             -------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTC-GGGHHHHHHHHHHH----HHHHHST
T ss_pred             -------------cccccccccccccccccccceeeeccccCCCCCcccccccc-cchhhhHHHHHHHH----HHHHhcC
Confidence                         17778899999999996 99999999999855443221111 01123444443333    3334569


Q ss_pred             CCeeEEEeeeeeccc
Q 022900          273 PSRKACRFFILLYRN  287 (290)
Q Consensus       273 l~~~ilR~~~lr~~~  287 (290)
                      ++++++|++.+....
T Consensus       136 ~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  136 LNWTIVRPGWIYGNP  150 (183)
T ss_dssp             SEEEEEEESEEEBTT
T ss_pred             CCEEEEECcEeEeCC
Confidence            999999999876544

...

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.8e-15  Score=138.37  Aligned_cols=160  Identities=16%  Similarity=0.033  Sum_probs=116.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhccc-CCCCeEEEEccccccc-----------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF-GNPNFELIRHDVVEPL-----------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~v~~~~~D~~~~~-----------~  178 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|+++++...... +...++. ...++.++.+|+.+..           +
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            3467899999999999999999999999999999987532222 2222221 2356888999997752           3


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----c--------CCeEEEEcCCccccCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V--------GARFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~--------~~riV~vSS~~vyg~~~~~~~  242 (290)
                      .++|+||||||......    ...++..++++|+.|+.++++++..    .        ..+||++||.+.+....    
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  163 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV----  163 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC----
Confidence            46999999999764432    2234567899999999999988642    1        13899999976442111    


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                            ....|+.+|.+.+.+++.++.+   +|+.+..+.|+
T Consensus       164 ------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        164 ------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence                  1236999999998888888764   57777777775

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=2.3e-15  Score=132.43  Aligned_cols=160  Identities=14%  Similarity=0.049  Sum_probs=117.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++++||||+|+||.++++.|+++|++|++++|+.....+....+. ...++.++.+|+.++.            ..+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999886433222222221 1356888899997652            135


Q ss_pred             CCEEEEcccCCCCCC-------------CCCChHHHHHHHHHHHHHHHHHHH----Hc-C-CeEEEEcCCccccCCCCCC
Q 022900          181 VDQIYHLACPASPVH-------------YKFNPVKTIKTNVVGTLNMLGLAK----RV-G-ARFLLTSTSEVYGDPLQHP  241 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~a~~----~~-~-~riV~vSS~~vyg~~~~~~  241 (290)
                      +|+||||||......             ..+++..++++|+.|+.++++++.    +. . .+||++||.+.||..    
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~----  158 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM----  158 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC----
Confidence            899999999643211             112345678999999998877653    22 2 379999998877643    


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          242 QKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       242 ~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                             ...+|+.+|.+.+.+++.+..+   .+++++.++|+.+.
T Consensus       159 -------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~  197 (253)
T PRK08217        159 -------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIE  197 (253)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence                   2357999999999888888764   58999999998874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.66  E-value=1.6e-15  Score=135.09  Aligned_cols=158  Identities=18%  Similarity=0.091  Sum_probs=113.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+ +... ...++..+.+|+.+..            +.++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE-LEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999885432222 1111 1346788889997652            2468


Q ss_pred             CEEEEcccCCCCCC-----CC----CChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH-----YK----FNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       182 D~vih~Ag~~~~~~-----~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      |++|||||......     ..    .++++++++|+.++.++++++.+.    +.++|++||...+...          .
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~  150 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN----------G  150 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC----------C
Confidence            99999999642111     11    235678999999999999998542    2378888886543111          0


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQFR--PSRKACRFFIL  283 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~l  283 (290)
                      ....|+.+|.+.+.+++.++.+++  +.+..+.|+.+
T Consensus       151 ~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i  187 (262)
T TIGR03325       151 GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGM  187 (262)
T ss_pred             CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCC
Confidence            124699999999999999988764  45556666554

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.8e-15  Score=132.45  Aligned_cols=160  Identities=12%  Similarity=0.023  Sum_probs=115.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++++||||+|+||.++++.|+++|++|++++|... ..+...... ...++.++.+|+.++.            +.+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999988642 112222221 2346788999998762            246


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||........    .+.++++++|+.++.++++++.+    .+ .+||++||.......    ..     ...
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----~~-----~~~  153 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA----DP-----GET  153 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC----CC-----Ccc
Confidence            89999999975332222    22455799999999999998753    23 489999986431100    00     124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .|+..|...+.+++.+..++   ++++..++|+.+
T Consensus       154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v  188 (263)
T PRK08226        154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYV  188 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcc
Confidence            69999999888888888765   788888888765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.66  E-value=2e-15  Score=134.47  Aligned_cols=158  Identities=15%  Similarity=0.040  Sum_probs=113.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+.....  ..++.++.+|+.+..            +.++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            46789999999999999999999999999999998643222211111  345788899997753            2469


Q ss_pred             CEEEEcccCCCCC-CC-C---C----ChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPV-HY-K---F----NPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       182 D~vih~Ag~~~~~-~~-~---~----~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      |++|||||+.... .. .   +    .+++++++|+.++..+++++.+    .+.+||++||.+.+....          
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  151 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG----------  151 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------
Confidence            9999999974321 11 1   1    1556789999999999988754    234899999987653211          


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF--RPSRKACRFFIL  283 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~l  283 (290)
                      ....|+.+|.+.+.+++.++.++  ++.+..+.|+.+
T Consensus       152 ~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i  188 (263)
T PRK06200        152 GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGT  188 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCcc
Confidence            12369999999999999988876  355556666544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.66  E-value=2.6e-15  Score=132.66  Aligned_cols=156  Identities=15%  Similarity=0.067  Sum_probs=113.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~v  184 (290)
                      |+|+||||+|+||.++++.|+++|++|++++|+.+...+.. ... ..++.++.+|+.+..            +.++|+|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELK-DEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57999999999999999999999999999998643222211 111 246888999997763            2369999


Q ss_pred             EEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |||||......     ..+++.+++++|+.|+.++++++.    +.+ .+||++||.+.+..     .     ....+|+
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~-----~~~~~Y~  148 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----Y-----AGGNVYG  148 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-----C-----CCCchhH
Confidence            99999643211     223456789999999888777653    444 48999999764311     1     1235799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|...+.+.+.+..++   ++.+.+++|+.+.
T Consensus       149 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~  181 (248)
T PRK10538        149 ATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVG  181 (248)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeec
Confidence            99999888888887654   6888889888763

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.9e-15  Score=139.75  Aligned_cols=161  Identities=11%  Similarity=0.062  Sum_probs=117.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++++|+||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999986543333222221 2346778899998763            256


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|++|||||........    +++++++++|+.|+.++++++.    +.+ .+||++||...+....          ...
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p----------~~~  154 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP----------YAA  154 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC----------Cch
Confidence            99999999975443333    2345689999999999888763    343 4899999976553211          124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF----RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~lr  284 (290)
                      .|+.+|.+...+.+.+..++    ++.++.+.|+.+.
T Consensus       155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~  191 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMD  191 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCcc
Confidence            79999998888887777653    6777777776654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.66  E-value=4e-15  Score=132.35  Aligned_cols=161  Identities=14%  Similarity=0.040  Sum_probs=115.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh-ccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-HHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+|+||.++++.|+++|++|+++.|......+... .+. ...++.++.+|+++..            +.
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999988774322222111 111 1346778899998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||........    +++++++++|+.+++++++++    ++.+  .+||++||...+..          ...
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~----------~~~  154 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP----------WPL  154 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC----------CCC
Confidence            689999999975433322    335668999999988776654    4444  48999999643311          112


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.+..++   |++++.++|+.+.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~  192 (261)
T PRK08936        155 FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAIN  192 (261)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCC
Confidence            3579999988888777776554   8889999998763

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.66  E-value=2.5e-15  Score=137.91  Aligned_cols=169  Identities=12%  Similarity=0.045  Sum_probs=116.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++++||||+++||.++++.|+++| ++|++++|+.+...+...++. ...++.++.+|+++..            ..+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            36799999999999999999999999 999999986543332222221 2346788899997662            246


Q ss_pred             CCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC---CeEEEEcCCccccCCCC----CCC--
Q 022900          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG---ARFLLTSTSEVYGDPLQ----HPQ--  242 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~---~riV~vSS~~vyg~~~~----~~~--  242 (290)
                      +|++|||||...+..     ..++++.++++|+.|+..+++++.    +.+   .+||++||...+.....    .+.  
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            999999999743221     123456789999999999877753    332   49999999876532100    000  


Q ss_pred             ----------------CC-CCCCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeee
Q 022900          243 ----------------KE-TYWGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFIL  283 (290)
Q Consensus       243 ----------------~E-~~~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~l  283 (290)
                                      .+ ..+.+...|+.+|.+...+.+.+.+++    |+.++.+.|+.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  223 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCI  223 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcc
Confidence                            00 111233569999998777777776653    677888888866

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.66  E-value=3.8e-15  Score=131.91  Aligned_cols=161  Identities=14%  Similarity=0.068  Sum_probs=117.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..++|+++||||+|+||+++++.|+++|++|++++|+.+...+...++. ...++.++.+|+.++.            +.
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3678999999999999999999999999999999986432222222221 2346889999998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||........    +++++.+++|+.++.++++++.+    .+ .+||++||...+....          ..
T Consensus        88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~  157 (256)
T PRK06124         88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA----------GD  157 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC----------Cc
Confidence            689999999975332221    24566899999999999977653    34 4899999976432111          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+.+.+++.+..++   ++++..++|+.+
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v  193 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYF  193 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCc
Confidence            479999998888887776553   788888888754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.66  E-value=3.7e-15  Score=131.30  Aligned_cols=159  Identities=17%  Similarity=0.069  Sum_probs=113.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +|+|+||||+|+||.++++.|+++|++|+++.+......+.. ..+. ...++.++.+|+.+..            +.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999987654322221111 1111 1346888999997652            2469


Q ss_pred             CEEEEcccCCCCCCC--C---CChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCCc-cccCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY--K---FNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSE-VYGDPLQHPQKETYW  247 (290)
Q Consensus       182 D~vih~Ag~~~~~~~--~---~~~~~~~~~Nv~gt~~ll~a~~~~--------~~riV~vSS~~-vyg~~~~~~~~E~~~  247 (290)
                      |+||||||...+...  +   +++..++++|+.++.++++++.+.        +.+||++||.+ .+|...         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------  152 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN---------  152 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC---------
Confidence            999999997543221  1   234567999999999998764331        13699999975 444221         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|...+.+++.++.++   ++++++++|+.+.
T Consensus       153 -~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~  191 (248)
T PRK06947        153 -EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIE  191 (248)
T ss_pred             -CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcc
Confidence             11369999999888888887764   7999999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.6e-15  Score=132.83  Aligned_cols=160  Identities=13%  Similarity=0.040  Sum_probs=116.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.+...+....+.   ...++..+.+|++++.            +
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            578899999999999999999999999999999986543333222221   2246788899998763            3


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||.......    .+++.+.+++|+.+..++++++.    +.+ .+||++||...+....          .
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  155 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------H  155 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC----------C
Confidence            468999999997533222    22456789999999888887754    333 4899999976543111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ...|+..|.+.+.+++.++.+   .|+++..+.|+.+
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v  192 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLV  192 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence            246888888887777777665   4788888888766

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.2e-15  Score=133.15  Aligned_cols=159  Identities=11%  Similarity=0.033  Sum_probs=115.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----------ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------~~~vD  182 (290)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+...++....++.++.+|+.++.           +.++|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4578999999999999999999999999999999864333332222222357889999998763           24689


Q ss_pred             EEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~p  252 (290)
                      +||||||........    ++..+++++|+.|+.++++++.+    .+ .++|++||... +|..           ....
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~  151 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-----------GYAS  151 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----------CccH
Confidence            999999975332221    23456889999999999998754    32 47999988643 3321           1246


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.+..++   ++.++.+.|+.+
T Consensus       152 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~  185 (263)
T PRK09072        152 YCASKFALRGFSEALRRELADTGVRVLYLAPRAT  185 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcc
Confidence            9999998888887777653   677777777654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.2e-15  Score=133.57  Aligned_cols=160  Identities=14%  Similarity=0.093  Sum_probs=115.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++++.            +.+
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986432222211121 1245678899998753            246


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|++|||||......    ..+++.+++++|+.|+.++++++.+    .+.+||++||...+...          .....
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~----------~~~~~  156 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM----------PMQAH  156 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC----------CCccH
Confidence            899999998542221    1233566899999999999998754    33489999997554211          12247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.+..++   |+.++.++|+.+
T Consensus       157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~  190 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPI  190 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence            9999999898888887653   677778887754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.2e-15  Score=132.51  Aligned_cols=157  Identities=18%  Similarity=0.028  Sum_probs=111.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.....+.....    ...++.+|+.++.            ..++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            56889999999999999999999999999999988542222211111    1256778887653            2368


Q ss_pred             CEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCC-ccccCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTS-EVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       182 D~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~-~vyg~~~~~~~~E~~~~~  249 (290)
                      |+||||||...+..      ..++++.++++|+.|+.++++.+.    +.+ .+||++||. +++|...          .
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~----------~  150 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT----------S  150 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC----------C
Confidence            99999999753211      112356789999999998888764    333 489999885 4565321          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..+   .|++++.++|+.+.
T Consensus       151 ~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~  188 (255)
T PRK06057        151 QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVN  188 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcC
Confidence            246999998777777665543   37999999998774

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=3.2e-15  Score=131.09  Aligned_cols=160  Identities=14%  Similarity=0.026  Sum_probs=116.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +.+++++||||+|+||.++++.|+++|++|+++ +|+.....+...... ...++.++.+|+.++.            +.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            567899999999999999999999999999998 775433222222111 2346888999998763            13


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccc-cCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVY-GDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~  249 (290)
                      ++|+|||+||.......    .++++.++++|+.++.++++++..    .+ .+||++||...+ |..           .
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------~  151 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----------C  151 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----------C
Confidence            69999999997532211    223467899999999999888754    32 379999997654 322           1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+..|...+.+++.+.+++   |++++.++|+.+.
T Consensus       152 ~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~  189 (247)
T PRK05565        152 EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAID  189 (247)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCcc
Confidence            2478999888777777776653   8899999998874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.65  E-value=5e-15  Score=129.97  Aligned_cols=160  Identities=14%  Similarity=0.012  Sum_probs=112.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhcccC-CCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++++||||+|+||.+++++|+++|++|+++ .|+.....+....... ..++.++.+|+.++.            ..++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            3689999999999999999999999999875 3432222222222211 245788999998763            2458


Q ss_pred             CEEEEcccCCCCCCCC-----CChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCCcc-ccCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHYK-----FNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEV-YGDPLQHPQKETYW  247 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~a~~~~--------~~riV~vSS~~v-yg~~~~~~~~E~~~  247 (290)
                      |+||||||........     .+++.++++|+.++.++++++.+.        +.+||++||.+. ++.+.         
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~---------  151 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG---------  151 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---------
Confidence            9999999964332211     234568999999999888876432        236999999754 44221         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                       ...+|+.+|...+.+++.+..+   .+++++++||+.+..
T Consensus       152 -~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~  191 (247)
T PRK09730        152 -EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYT  191 (247)
T ss_pred             -cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcC
Confidence             1136999999888888877754   489999999998854

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.8e-15  Score=131.33  Aligned_cols=158  Identities=14%  Similarity=0.053  Sum_probs=115.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc------------cCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL------------LEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~------------~~vD~  183 (290)
                      +++++||||+|+||.++++.|+++|++|++++|+.....+..... ...+++++.+|+.+...            .++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL-GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999998643333222222 33568889999977631            35899


Q ss_pred             EEEcccCCCCCCCC-CC---hHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVHYK-FN---PVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~~~-~~---~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||||........ .+   +...+++|+.++.++++++.    +.+ .+||++||...+... .          ..+|+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~----------~~~y~  149 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G----------HPAYS  149 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C----------CcccH
Confidence            99999975433222 22   34567899999999998873    333 389999996433211 0          13699


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                      .+|.+.+.+++.+..++   |+++.+++++.+..
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t  183 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKT  183 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCc
Confidence            99999999998888664   68889999987754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.65  E-value=3.1e-15  Score=133.20  Aligned_cols=161  Identities=15%  Similarity=0.052  Sum_probs=114.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh-hhccc--CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-VMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+++||.+++++|+++|++|+++.|......+. ...+.  ...++.++.+|++++.            +
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            6789999999999999999999999999999886532221111 11111  2347889999998763            3


Q ss_pred             cCCCEEEEcccCCCCC------C-CC---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV------H-YK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQK  243 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~------~-~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~  243 (290)
                      .++|++|||||.....      . .+   .+...++++|+.+.+.+++.+.+    .+ .+||++||...+-..      
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  159 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI------  159 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC------
Confidence            4699999999864211      1 11   23455789999998887776543    33 389999996532110      


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .    ....|+.+|.+.+.+++.++.++   |+++..+.|+.+.
T Consensus       160 ~----~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~  199 (260)
T PRK08416        160 E----NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPID  199 (260)
T ss_pred             C----CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence            0    12379999999999999988875   7888888887653

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.65  E-value=2.7e-15  Score=161.68  Aligned_cols=168  Identities=20%  Similarity=0.178  Sum_probs=124.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC----CeEEEEeCCCCCchh--hhhccc---------CCCCeEEEEcccccccc-
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG----DSVIVVDNFFTGRKE--NVMHHF---------GNPNFELIRHDVVEPLL-  178 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G----~~V~~~~r~~~~~~~--~~~~~~---------~~~~v~~~~~D~~~~~~-  178 (290)
                      ..++|+||||+||||.+++++|++++    ++|+++.|.......  .+....         ...+++++.+|+.++.+ 
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    789999886422211  111000         11368899999976532 


Q ss_pred             ----------cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCC---------
Q 022900          179 ----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL---------  238 (290)
Q Consensus       179 ----------~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~---------  238 (290)
                                .++|+|||||+..   .+...+......|+.|+.+++++|.+.+. +|+|+||.++||...         
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~---~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALV---HWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEe---cCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence                      3699999999964   33445666667899999999999998774 899999999997421         


Q ss_pred             ---CCCCCCCCC------CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          239 ---QHPQKETYW------GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       239 ---~~~~~E~~~------~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                         ...+.|..+      ...++|+.+|+.+|.++..+.+. |++++++|++++-+.
T Consensus      1127 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             hccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccC
Confidence               112333321      23457999999999999888765 999999999998654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=2.4e-15  Score=132.58  Aligned_cols=160  Identities=17%  Similarity=0.095  Sum_probs=112.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccc--c------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVE--P------------L  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~--~------------~  177 (290)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++.  ...++.++.+|+.+  +            .
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999986433222222221  22356677777742  1            2


Q ss_pred             ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +.++|+||||||......     ..++++..+++|+.|+.++++++.    +.+ .+||++||...+...          
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~----------  159 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR----------  159 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC----------
Confidence            346999999999743321     123456789999999999998874    333 489999997543211          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ....+|+.+|.+.+.+++.+..++   ++.++.++++.+
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v  198 (247)
T PRK08945        160 ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGT  198 (247)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCc
Confidence            112479999999999888888765   455556666554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=8.2e-15  Score=128.30  Aligned_cols=159  Identities=17%  Similarity=0.127  Sum_probs=114.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++++++||||+|+||.++++.|+++|++|+++.|+.....+......  ...++.++.+|+.+..            +.
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            466899999999999999999999999999888875432222221111  2356888899997763            23


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCc-cccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSE-VYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~-vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||........    +.++..+++|+.++.++++++.+.    + .+||++||.. +||..           .
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~-----------~  151 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP-----------G  151 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------C
Confidence            689999999975432211    234567899999999999988643    2 3799999963 45532           1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..+|+..|.+.+.+++.+.++   .++.+++++|+.+
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~  188 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFI  188 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcc
Confidence            256889998888777776654   3788888888765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=3.1e-15  Score=132.79  Aligned_cols=159  Identities=15%  Similarity=0.051  Sum_probs=117.3

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+  ++||.+++++|+++|++|++++|+ .+..+.+.+. ...++..+.+|++++.            ++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL-VDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh-ccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            568999999999  799999999999999999999886 2222333333 2346788999998762            34


Q ss_pred             CCCEEEEcccCCCCC----C----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPV----H----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|++|||||...+.    .    ..++++.++++|+.+++.+++++.+.   +.+||++||.+....     .     .
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~-----~  152 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA-----I-----P  152 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-----C-----C
Confidence            699999999975321    1    12345678999999999999887653   248999998653211     0     0


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....|+.+|.+.+.+++.++.+   +|+.+..+.|+.+.
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~  191 (252)
T PRK06079        153 NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVK  191 (252)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            1247999999998888888875   47888888888764

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6e-15  Score=132.47  Aligned_cols=160  Identities=13%  Similarity=0.045  Sum_probs=115.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-------hhhccc-CCCCeEEEEccccccc--------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-------NVMHHF-GNPNFELIRHDVVEPL--------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~-~~~~v~~~~~D~~~~~--------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+       ....+. ...++.++.+|++++.        
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            567899999999999999999999999999999986532111       111111 2346888899997763        


Q ss_pred             ----ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEcCCccccCCCCCCCCC
Q 022900          178 ----LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----V-GARFLLTSTSEVYGDPLQHPQKE  244 (290)
Q Consensus       178 ----~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~-~~riV~vSS~~vyg~~~~~~~~E  244 (290)
                          +.++|+||||||........    +++++++++|+.++.++++++..    . +.+||++||.....        .
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------~  155 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD--------P  155 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--------c
Confidence                23699999999975433322    23566899999999999999853    2 24899998853211        0


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFF  281 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~  281 (290)
                      ..+....+|+.+|.+.+.+++.++.++   ++.++.+.|+
T Consensus       156 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg  195 (273)
T PRK08278        156 KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPR  195 (273)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCC
Confidence            111234689999999999999998765   6777777776

>TIGR02415 23BDH acetoin reductases

Probab=99.65  E-value=3.8e-15  Score=131.55  Aligned_cols=156  Identities=21%  Similarity=0.133  Sum_probs=113.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCCE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      |+++||||+|+||.+++++|+++|++|++++|+.....+....+. ...++.++.+|++++.            +.++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            579999999999999999999999999999886433222222222 2346888999998763            235899


Q ss_pred             EEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCc-cccCCCCCCCCCCCCCCCCh
Q 022900          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSE-VYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       184 vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~-vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ||||||......    ...+++.++++|+.++..+++++.+    .+  .+||++||.. ++|.+           ...+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP-----------ILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC-----------CCcc
Confidence            999999743222    1233467899999999988877643    22  4899999965 45432           1357


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.+..++   ++.+..++|+.+
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i  183 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIV  183 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence            9999999988888887664   677888888754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.2e-15  Score=130.41  Aligned_cols=161  Identities=17%  Similarity=0.108  Sum_probs=114.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc--------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL--------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~--------------  177 (290)
                      +++++++||||+|+||.++++.|+++|++|++++|+.....+....+.  ...++..+.+|+.+..              
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999987543333222221  2235666777775421              


Q ss_pred             c-cCCCEEEEcccCCCCCC--CC---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 L-LEVDQIYHLACPASPVH--YK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 ~-~~vD~vih~Ag~~~~~~--~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      + .++|+||||||......  ..   .++.+.+++|+.|+.++++++.+    .+ .++|++||....-     +.    
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----~~----  154 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----PK----  154 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----CC----
Confidence            2 46899999999643211  12   23456799999999999888743    33 4899999854221     00    


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~lr  284 (290)
                       .....|+.+|.+.+.+++.++.++    ++++..++|+.+.
T Consensus       155 -~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~  195 (239)
T PRK08703        155 -AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPIN  195 (239)
T ss_pred             -CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCccc
Confidence             122479999999999999888775    4778888888764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.64  E-value=7.8e-15  Score=129.06  Aligned_cols=159  Identities=16%  Similarity=0.043  Sum_probs=112.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++|+++||||+|+||.+++++|+++|++|+++.+.. ....+...... ...++..+.+|+.+..            +.+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999998865422 22222222221 1345777889997762            246


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||......    ...++++++++|+.++.++++++.    +.+ .+||++||.... +..           ..
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~  150 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF-----------GQ  150 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC-----------CC
Confidence            999999999753222    123456789999999888777653    344 389999996432 211           23


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+.++   .++++..++|+.+.
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~  187 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIG  187 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccC
Confidence            57999999888888777764   47888888887654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.8e-15  Score=130.97  Aligned_cols=160  Identities=17%  Similarity=0.072  Sum_probs=116.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccccc------------cC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL------------LE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~------------~~  180 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+....+. ...++.++.+|+.++..            .+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999875433222222221 13468889999987632            46


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    ..+++.++++|+.++.++++++.+.    + .+||++||...+....          ...
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  154 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP----------KLG  154 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC----------Ccc
Confidence            9999999997543221    1234567899999999999987542    2 3899999976542211          124


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      .|+..|...+.+++.+..+   .++.+..++|+.+
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v  189 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLT  189 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCC
Confidence            6899999888888877754   4788888888765

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=6.3e-15  Score=131.14  Aligned_cols=162  Identities=12%  Similarity=0.053  Sum_probs=121.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------------ccc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------------~~~  179 (290)
                      .+.+++.|+||||++++|+.++.+++++|.++++.|.+.....+-+....+.+++....+|+++.            +.+
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            55789999999999999999999999999999999998877777666554434789999999876            245


Q ss_pred             CCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||+....+..+    +-++++++|+.|.+..+++..    +.+ .+||.++|++-+ |..           -
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~-----------g  182 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA-----------G  182 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc-----------c
Confidence            7999999999876555333    235689999999999888854    333 499999997643 322           2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH------hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ------FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~------~gl~~~ilR~~~lr  284 (290)
                      ..+|..+|.+..-..+++..+      .|++.+.+=|+.++
T Consensus       183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~  223 (300)
T KOG1201|consen  183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN  223 (300)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc
Confidence            357999999886666555533      24555555555444

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.5e-14  Score=128.76  Aligned_cols=161  Identities=16%  Similarity=0.100  Sum_probs=117.6

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG-~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~------------  177 (290)
                      .++++++||||+| +||.++++.|+++|++|++++|+.....+....+   .+..++.++.+|+.++.            
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5678999999997 8999999999999999999988643333322222   12346888999998752            


Q ss_pred             ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      ++++|+||||||........    +++.+++++|+.++..+++++.+    .+  .+||++||...+-..          
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------  164 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----------  164 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------
Confidence            24689999999964332222    34566889999999999888643    32  389998886433111          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .....|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~  204 (262)
T PRK07831        165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAM  204 (262)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence            12347999999999999998876   57888999987653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.63  E-value=1.3e-14  Score=127.10  Aligned_cols=156  Identities=14%  Similarity=0.090  Sum_probs=113.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      +|+++||||+|+||.++++.|+++|++|++++|+.....+.+.    ...+.++.+|++++.            +.++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR----QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            4689999999999999999999999999999986433222221    123678889997753            245999


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|||||.......    .+++++++++|+.++..+++++.+    .+   .+||++||.......          .....
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~  147 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS----------DKHIA  147 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC----------CCCcc
Confidence            9999996433221    234577899999999988777643    22   389999986432110          01247


Q ss_pred             hhhhHHHHHHHHHHHHHHh--CCCeeEEEeeeeec
Q 022900          253 IGTYFFSFSLIFLVFISQF--RPSRKACRFFILLY  285 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~lr~  285 (290)
                      |+.+|.+.+.+++.+..++  ++.+..+.|+.+.+
T Consensus       148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence            9999999999999999886  46777777776643

>PRK12320 hypothetical protein; Provisional

Probab=99.63  E-value=5.2e-15  Score=147.40  Aligned_cols=132  Identities=25%  Similarity=0.326  Sum_probs=100.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc----cCCCEEEEcccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL----LEVDQIYHLACPAS  192 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~----~~vD~vih~Ag~~~  192 (290)
                      |+|+||||+||||++++++|+++|++|++++|....        ....+++++.+|+.+..+    .++|+|||+|+...
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~--------~~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD--------ALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDT   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh--------cccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence            479999999999999999999999999999975321        112468889999987643    57999999998531


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR  272 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g  272 (290)
                      .     .   ..++|+.|+.|++++|++.++++|++||.  ||.+      +       .|.    ..|.    +...++
T Consensus        73 ~-----~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~~------~-------~~~----~aE~----ll~~~~  121 (699)
T PRK12320         73 S-----A---PGGVGITGLAHVANAAARAGARLLFVSQA--AGRP------E-------LYR----QAET----LVSTGW  121 (699)
T ss_pred             c-----c---hhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCCC------c-------ccc----HHHH----HHHhcC
Confidence            1     1   12589999999999999999899999986  4421      1       111    1333    334467


Q ss_pred             CCeeEEEeeeeeccc
Q 022900          273 PSRKACRFFILLYRN  287 (290)
Q Consensus       273 l~~~ilR~~~lr~~~  287 (290)
                      ++++++|++|+.+.+
T Consensus       122 ~p~~ILR~~nVYGp~  136 (699)
T PRK12320        122 APSLVIRIAPPVGRQ  136 (699)
T ss_pred             CCEEEEeCceecCCC
Confidence            899999999998764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.63  E-value=1.1e-14  Score=127.60  Aligned_cols=158  Identities=15%  Similarity=0.028  Sum_probs=113.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      |+++||||+|+||.++++.|+++|++|++++|+........ .... ...++.++.+|+.++.            +.++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999999998642111111 1111 2346889999998763            24699


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||.......    .++++.++++|+.++.++++++    ++.+ .+||++||...++...          ...+|
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~----------~~~~Y  152 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF----------GQTNY  152 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC----------CChHH
Confidence            99999997532221    2345678999999999987654    4333 4999999976653221          12368


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|.+.+.+++.+..+   .++++.+++|+.+.
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~  186 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIA  186 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccC
Confidence            99998877777777653   47888888988763

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=6.3e-15  Score=132.44  Aligned_cols=160  Identities=13%  Similarity=0.028  Sum_probs=114.3

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||++  +||.+++++|+++|++|++++|+.. ..+.+..... ......+.+|++++.            +
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5678999999997  9999999999999999999987532 1122222211 122346889998763            3


Q ss_pred             cCCCEEEEcccCCCCC----C----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV----H----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|++|||||.....    .    ..+++++++++|+.++.++++++...   +.+||++||.+...     +..    
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~-----~~~----  154 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR-----VMP----  154 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-----cCC----
Confidence            5699999999975321    1    22346778999999999999887542   24899999875321     000    


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|.+...+++.++.++   |+.+..+.|+.+.
T Consensus       155 -~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~  193 (271)
T PRK06505        155 -NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVR  193 (271)
T ss_pred             -ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcc
Confidence             12479999999988888888764   7888888887663

>PRK06484 short chain dehydrogenase; Validated

Probab=99.63  E-value=6.6e-15  Score=143.62  Aligned_cols=159  Identities=14%  Similarity=0.124  Sum_probs=119.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ..+|+++||||+|+||.++++.|+++|++|++++|+.....+.....  ..++..+.+|++++.            ++++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999998643222222111  245677889998763            2469


Q ss_pred             CEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       182 D~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |+||||||......     ..++++.++++|+.|+.++++++...   +.+||++||.+.+....          ....|
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y  414 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP----------PRNAY  414 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC----------CCchh
Confidence            99999999753211     12345778999999999999987653   24899999976543111          22479


Q ss_pred             hhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+|...+.+++.++.++   |+++..+.|+.+.
T Consensus       415 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~  448 (520)
T PRK06484        415 CASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIE  448 (520)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCcc
Confidence            999999998888888764   7888888888653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.63  E-value=6.8e-15  Score=147.37  Aligned_cols=162  Identities=12%  Similarity=0.031  Sum_probs=121.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|+.+..            +.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999986433222222221 2346888999998763            23


Q ss_pred             CCCEEEEcccCCCCCCCC------CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~------~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|++|||||........      ++++.++++|+.|+.++++++.    +.+ .+||++||.+.|+...          
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  517 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP----------  517 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------
Confidence            699999999964322211      2456789999999999887753    344 4899999998875321          


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.+..+   .|+.++.++|+.+.
T Consensus       518 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~  556 (657)
T PRK07201        518 RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVR  556 (657)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCc
Confidence            1257999999998888888765   48999999988764

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.6e-15  Score=132.85  Aligned_cols=157  Identities=18%  Similarity=0.097  Sum_probs=113.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCchhhhhccc-CCCCeEEEEccccccc------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF---------TGRKENVMHHF-GNPNFELIRHDVVEPL------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~-~~~~v~~~~~D~~~~~------  177 (290)
                      +++|+++||||+++||.++++.|+++|++|++++++.         ....+...++. ...++.++.+|++++.      
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            5678999999999999999999999999999988753         11112222221 2346788899998752      


Q ss_pred             ------ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----c---C----CeEEEEcCCcc-cc
Q 022900          178 ------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V---G----ARFLLTSTSEV-YG  235 (290)
Q Consensus       178 ------~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~---~----~riV~vSS~~v-yg  235 (290)
                            +.++|++|||||......    ..++++.++++|+.|++++++++..    .   +    .+||++||.+. ++
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence                  356999999999754322    1234677899999999999887642    1   1    38999999654 33


Q ss_pred             CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          236 DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       236 ~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                      ..           ....|+.+|.+.+.+.+.++.+   +|+.+..+.|+
T Consensus       164 ~~-----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg  201 (286)
T PRK07791        164 SV-----------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA  201 (286)
T ss_pred             CC-----------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence            21           1247999999988888887765   47777777775

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=7.2e-15  Score=128.52  Aligned_cols=161  Identities=12%  Similarity=0.027  Sum_probs=116.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++++|+||||+|+||.++++.|+++|++|++++|+.....+.........+++++.+|+.++.            +.++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999864332222122222246888999998653            2458


Q ss_pred             CEEEEcccCCCCCC--CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcc-ccCCCCCCCCCCCCCCCChhhh
Q 022900          182 DQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEV-YGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       182 D~vih~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~v-yg~~~~~~~~E~~~~~~~py~~  255 (290)
                      |.+||++|......  ..++.+.++++|+.+..++++.+.+.   +.++|++||... ++..          ....+|+.
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~~Y~~  152 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS----------PDQLSYAV  152 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC----------CCchHHHH
Confidence            99999998532211  11234567899999999998887553   348999998653 3211          12346999


Q ss_pred             hHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|...+.+++.+..++   +++++++||+.+.
T Consensus       153 sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~  184 (238)
T PRK05786        153 AKAGLAKAVEILASELLGRGIRVNGIAPTTIS  184 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccC
Confidence            9998888888888664   8999999998774

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.3e-14  Score=125.80  Aligned_cols=152  Identities=12%  Similarity=0.061  Sum_probs=106.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc--------cCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--------LEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--------~~vD~vih~  187 (290)
                      +|+++||||+|+||.++++.|+++ ++|++++|+.....+ +...  ...++++.+|+.++..        .++|+|||+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDE-LAAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH-HHHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            579999999999999999999999 999999986322211 1111  1357888999987631        259999999


Q ss_pred             ccCCCCCCCC----CChHHHHHHHHHHHHHHHHH----HHHcCCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHH
Q 022900          188 ACPASPVHYK----FNPVKTIKTNVVGTLNMLGL----AKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFS  259 (290)
Q Consensus       188 Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a----~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~  259 (290)
                      ||........    +++.+++++|+.+..+++++    +++.+.++|++||...++...          ...+|+..|..
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~----------~~~~y~~~K~a  148 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP----------GWGSYAASKFA  148 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC----------CCchHHHHHHH
Confidence            9974332211    23456789999996665554    444556999999987664221          23579999998


Q ss_pred             HHHHHHHHHHHh-C-CCeeEEEee
Q 022900          260 FSLIFLVFISQF-R-PSRKACRFF  281 (290)
Q Consensus       260 ~e~~~~~~~~~~-g-l~~~ilR~~  281 (290)
                      .+.+++.+...+ + +++..++++
T Consensus       149 ~~~~~~~~~~~~~~~i~~~~i~pg  172 (227)
T PRK08219        149 LRALADALREEEPGNVRVTSVHPG  172 (227)
T ss_pred             HHHHHHHHHHHhcCCceEEEEecC
Confidence            888888877654 3 455555554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.62  E-value=7.6e-15  Score=134.18  Aligned_cols=171  Identities=16%  Similarity=0.075  Sum_probs=125.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..+++++||||+++||.+++++|+.+|++|++..|+.+...+....+.   ...++.+..+|+.+..            .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999998655444444443   3567888999997763            3


Q ss_pred             cCCCEEEEcccCCCCCC--CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc-ccCCCCCCCCCCC--CC
Q 022900          179 LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV-YGDPLQHPQKETY--WG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v-yg~~~~~~~~E~~--~~  248 (290)
                      .+.|++|||||+..++.  .++..+.++.+|+.|...+++++.    ... .|||++||... ..........|..  ..
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~  192 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYS  192 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCcc
Confidence            46899999999876655  345678899999999999888753    333 59999999765 1112222222221  11


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF--RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~lr  284 (290)
                      ...-|+.+|.+.......+++++  |+.+..+-|+.++
T Consensus       193 ~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~  230 (314)
T KOG1208|consen  193 SDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVK  230 (314)
T ss_pred             chhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccc
Confidence            12248888888877888888776  5777777777554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.62  E-value=9.9e-15  Score=130.43  Aligned_cols=158  Identities=11%  Similarity=-0.014  Sum_probs=111.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhccc--CCCCeEEEEccccccc----------------
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF--GNPNFELIRHDVVEPL----------------  177 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~v~~~~~D~~~~~----------------  177 (290)
                      ++++||||+|+||.+++++|+++|++|++++|...... +....+.  ...++..+.+|++++.                
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999876432222 2222221  1235667889998863                


Q ss_pred             ccCCCEEEEcccCCCCCCCC----C-----------ChHHHHHHHHHHHHHHHHHHHHcC-----------CeEEEEcCC
Q 022900          178 LLEVDQIYHLACPASPVHYK----F-----------NPVKTIKTNVVGTLNMLGLAKRVG-----------ARFLLTSTS  231 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~----~-----------~~~~~~~~Nv~gt~~ll~a~~~~~-----------~riV~vSS~  231 (290)
                      +.++|+||||||...+....    .           ++.+++++|+.++..+++++.+..           .+||++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            24699999999965332211    1           245689999999999998764321           257888775


Q ss_pred             ccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          232 EVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       232 ~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....     +     .....+|+.+|.+.+.+++.+..+   +|++++.++|+.+.
T Consensus       162 ~~~~-----~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~  207 (267)
T TIGR02685       162 MTDQ-----P-----LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL  207 (267)
T ss_pred             hccC-----C-----CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence            4321     1     113358999999999999888766   58899999998763

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.7e-15  Score=127.45  Aligned_cols=154  Identities=10%  Similarity=0.036  Sum_probs=112.5

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEEEcccCC
Q 022900          120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIYHLACPA  191 (290)
Q Consensus       120 lVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vih~Ag~~  191 (290)
                      +||||+|+||.+++++|+++|++|++++|+.....+....+....+++++.+|++++.        ..++|++|||||..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            5999999999999999999999999999864322222222212356888999998763        24589999999975


Q ss_pred             CCCCC----CCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Q 022900          192 SPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       192 ~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~  266 (290)
                      .....    .+++++++++|+.++.+++++....+ .+||++||.+.|...          ....+|+.+|.+.+.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS----------ASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC----------CcchHHHHHHHHHHHHHHH
Confidence            43322    23456789999999999999665444 489999998776421          1235799999999999888


Q ss_pred             HHHHh-CCCeeEEEeeee
Q 022900          267 FISQF-RPSRKACRFFIL  283 (290)
Q Consensus       267 ~~~~~-gl~~~ilR~~~l  283 (290)
                      +..++ ++.++.+.|+.+
T Consensus       151 la~e~~~irv~~i~pg~~  168 (230)
T PRK07041        151 LALELAPVRVNTVSPGLV  168 (230)
T ss_pred             HHHHhhCceEEEEeeccc
Confidence            88765 555666666543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.62  E-value=1e-14  Score=128.26  Aligned_cols=162  Identities=18%  Similarity=0.204  Sum_probs=110.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccccc-CCCEEEEcccCCCCCC-C
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHLACPASPVH-Y  196 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~vD~vih~Ag~~~~~~-~  196 (290)
                      |+||||||+||++|+..|.+.||+|++++|+.........     ..+.  ..|-.++... ++|+|||+||...... +
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----~~v~--~~~~~~~~~~~~~DavINLAG~~I~~rrW   73 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----PNVT--LWEGLADALTLGIDAVINLAGEPIAERRW   73 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----cccc--ccchhhhcccCCCCEEEECCCCccccccC
Confidence            6899999999999999999999999999997655544332     1122  1222233333 7999999999654433 2


Q ss_pred             -CCChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC
Q 022900          197 -KFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR  272 (290)
Q Consensus       197 -~~~~~~~~~~Nv~gt~~ll~a~~~~~~---riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g  272 (290)
                       .+..+..++.-+..|..+.++..+...   .+|.-|.++.||......++|+.....+-...-....|+..+.+. ..|
T Consensus        74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~-~~g  152 (297)
T COG1090          74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQ-QLG  152 (297)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhh-hcC
Confidence             223456789999999999999876542   455555566799998888888853222233333333344433333 359


Q ss_pred             CCeeEEEeeeeecccC
Q 022900          273 PSRKACRFFILLYRNG  288 (290)
Q Consensus       273 l~~~ilR~~~lr~~~~  288 (290)
                      .+++.+|+++|....|
T Consensus       153 tRvvllRtGvVLs~~G  168 (297)
T COG1090         153 TRVVLLRTGVVLSPDG  168 (297)
T ss_pred             ceEEEEEEEEEecCCC
Confidence            9999999999988544

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.1e-14  Score=130.45  Aligned_cols=158  Identities=15%  Similarity=0.062  Sum_probs=111.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------ccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      |+++||||+|+||.++++.|+++|++|++++|+.+...+...++.  +.....++.+|+.++.            +.++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999886433222222221  2223455778887653            24589


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----V--GARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~--~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +||||||.......    .++++.++++|+.|+.++++++..    .  +.+||++||...+...          ....+
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL----------PWHAA  150 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC----------CCCcc
Confidence            99999996532222    233567899999999999998642    2  2489999997543111          01246


Q ss_pred             hhhhHHHHHHHHHHHHH---HhCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~---~~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..   .+++++++++|+.+.
T Consensus       151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~  185 (272)
T PRK07832        151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVK  185 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            89999877666666653   458999999998774

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.62  E-value=1.6e-14  Score=128.74  Aligned_cols=159  Identities=17%  Similarity=0.011  Sum_probs=113.0

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+  ++||.+++++|+++|++|++++|+... .+.+.+... .....++.+|++++.            +
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence            578999999998  599999999999999999999886422 112222211 123557889998762            3


Q ss_pred             cCCCEEEEcccCCCCC----C----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV----H----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|++|||||.....    .    ..+++++++++|+.|+.++++++...   +.+||++||.+...     +.     
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----~~-----  156 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----VV-----  156 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----CC-----
Confidence            5699999999974321    1    12346778999999999999987543   24899999864321     11     


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      .....|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+
T Consensus       157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v  195 (258)
T PRK07533        157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPL  195 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCc
Confidence            01246999999988888887765   4777888887765

>PRK05865 hypothetical protein; Provisional

Probab=99.61  E-value=9e-15  Score=148.47  Aligned_cols=126  Identities=24%  Similarity=0.350  Sum_probs=100.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~  191 (290)
                      |+|+||||+||||++++++|+++|++|++++|+....   .     ..++.++.+|+.+..     +.++|+|||||+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----PSSADFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            4799999999999999999999999999999853211   1     125778889997753     45799999999853


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                      .+         .+++|+.|+.+++++|++.+. +||++||.+                        |...|.++    .+
T Consensus        73 ~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll----~~  115 (854)
T PRK05865         73 GR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQML----AD  115 (854)
T ss_pred             cc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHH----HH
Confidence            21         468999999999999999885 999999953                        44445443    45


Q ss_pred             hCCCeeEEEeeeeeccc
Q 022900          271 FRPSRKACRFFILLYRN  287 (290)
Q Consensus       271 ~gl~~~ilR~~~lr~~~  287 (290)
                      ++++++++|++++.+.+
T Consensus       116 ~gl~~vILRp~~VYGP~  132 (854)
T PRK05865        116 CGLEWVAVRCALIFGRN  132 (854)
T ss_pred             cCCCEEEEEeceEeCCC
Confidence            79999999999998754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=2.4e-14  Score=127.61  Aligned_cols=160  Identities=13%  Similarity=-0.004  Sum_probs=115.1

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh---cccCCCCeEEEEccccccc-----------
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~v~~~~~D~~~~~-----------  177 (290)
                      +++|+++||||+  ++||.+++++|+++|++|++++|+.. ..+.+.   ......++..+.+|++++.           
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGER-LEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCccc-chHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            567899999997  89999999999999999999987531 222222   2122356788899998773           


Q ss_pred             -ccCCCEEEEcccCCCC----CC-CC---CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASP----VH-YK---FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~----~~-~~---~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                       ++++|++|||||....    .. .+   +++..++++|+.+...+++++.+..   .+||++||.+..-     +..  
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----~~~--  156 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----VVQ--  156 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----CCC--
Confidence             3569999999996431    11 11   2345678999999999888876432   4899999975321     111  


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ...+|+.+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       157 ---~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  195 (257)
T PRK08594        157 ---NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIR  195 (257)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCccc
Confidence               12479999999998888888654   6888888887653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.2e-14  Score=128.82  Aligned_cols=161  Identities=10%  Similarity=0.033  Sum_probs=117.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+|+||||+|+||.++++.|+++|++ |++++|+.....+....+. ...++.++.+|++++.            +.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999998 9999886432222221221 2346778889998753            24


Q ss_pred             CCCEEEEcccCCCCCCC-C---CChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~-~---~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||....... +   +.++.++++|+.++.++++++.+    .+  .++|++||...++...          .
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------~  153 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----------F  153 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC----------C
Confidence            69999999997533221 1   23456799999999999988743    22  3799999988765321          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+..|.+.+.+++.+..++   ++.++.++|+.+.
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~  191 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMA  191 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeecccc
Confidence            3579999999999888887654   5778888887764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.61  E-value=1.3e-14  Score=145.77  Aligned_cols=164  Identities=16%  Similarity=0.115  Sum_probs=118.5

Q ss_pred             CCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc--------
Q 022900          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL--------  177 (290)
Q Consensus       109 p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~--------  177 (290)
                      |+...+.+|+|+||||+|+||.+++++|+++|++|++++|+.....+......   ...++..+.+|++++.        
T Consensus       407 ~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            33345678999999999999999999999999999999986433322222221   2345778899998763        


Q ss_pred             ----ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCcc-ccCCCCCCC
Q 022900          178 ----LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEV-YGDPLQHPQ  242 (290)
Q Consensus       178 ----~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~v-yg~~~~~~~  242 (290)
                          +.++|+||||||........    .+++..+++|+.+..++++++.    +.+  .+||++||... ++..     
T Consensus       487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~-----  561 (676)
T TIGR02632       487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK-----  561 (676)
T ss_pred             HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC-----
Confidence                24699999999975433222    2356678999999888876543    333  48999999653 4322     


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                            ...+|+.+|.+.+.+++.++.++   |+.+..+.++.+
T Consensus       562 ------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V  599 (676)
T TIGR02632       562 ------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAV  599 (676)
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCce
Confidence                  12589999999999999888764   677777777655

>PRK08324 short chain dehydrogenase; Validated

Probab=99.61  E-value=1.4e-14  Score=145.89  Aligned_cols=162  Identities=16%  Similarity=0.075  Sum_probs=120.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ....+++|+||||+|+||.++++.|+++|++|++++|+..........+....++.++.+|++++.            ++
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999999999865333222222211246888999998763            24


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||.......    ..++..++++|+.|+.++++++.    +.+  .+||++||...+....          .
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~----------~  567 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP----------N  567 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC----------C
Confidence            69999999997543322    23456789999999999988764    333  4899999976542111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+++.+..++   |+++.+++|+.+
T Consensus       568 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v  604 (681)
T PRK08324        568 FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAV  604 (681)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCcee
Confidence            2579999999999999988765   588889998887

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.61  E-value=1.8e-14  Score=126.24  Aligned_cols=155  Identities=15%  Similarity=0.069  Sum_probs=111.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh-ccc-CCCCeEEEEccccccc------------ccCCCEE
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-HHF-GNPNFELIRHDVVEPL------------LLEVDQI  184 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~v~~~~~D~~~~~------------~~~vD~v  184 (290)
                      |+||||+|+||.++++.|+++|++|++++|......+... .+. ...++.++.+|+.+..            ..++|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999998875322222221 111 2346889999998763            2358999


Q ss_pred             EEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEcCCc-cccCCCCCCCCCCCCCCCChh
Q 022900          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~-----~~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |||||......    ...+++.++++|+.++.++++++.     +.+ .+||++||.+ +++.+           ....|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y  149 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR-----------GQVNY  149 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC-----------CCcch
Confidence            99999753322    233467789999999999988763     122 4899999964 55532           12468


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +.+|...+.+.+.+..+   .|++++.++|+.+.
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  183 (239)
T TIGR01831       150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLID  183 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCc
Confidence            99998887777777654   47888888888764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.61  E-value=1.2e-14  Score=129.12  Aligned_cols=157  Identities=9%  Similarity=0.001  Sum_probs=109.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~v  184 (290)
                      |+++||||+|+||.+++++|+++|++|++++|+.....+...++....++.++.+|++++.            +.++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4799999999999999999999999999999864333332222222246788999998753            3469999


Q ss_pred             EEcccCCCCC---CCC---CChHHHHHHHHHHHHHHHHHH----H-HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          185 YHLACPASPV---HYK---FNPVKTIKTNVVGTLNMLGLA----K-RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       185 ih~Ag~~~~~---~~~---~~~~~~~~~Nv~gt~~ll~a~----~-~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |||||.....   ..+   .++.+.+++|+.++..+++++    . +.+ .+||++||.+.+...          ....+
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  150 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM----------PPLVL  150 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC----------CCchH
Confidence            9999964211   111   234556788998877766543    2 222 489999998664211          12247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+++.++.++   |+.+..+.|+.+
T Consensus       151 y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v  184 (259)
T PRK08340        151 ADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSF  184 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcc
Confidence            9999999899999888875   455555655543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.60  E-value=2.5e-14  Score=127.34  Aligned_cols=159  Identities=11%  Similarity=0.032  Sum_probs=111.4

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhcccCCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||  +++||.+++++|+++|++|++++|+. ....+.+..... .++.++.+|++++.            +
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            46789999999  89999999999999999999998753 111122222112 35778899998763            3


Q ss_pred             cCCCEEEEcccCCCCC-----CCC---CChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV-----HYK---FNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~-----~~~---~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      .++|++|||||.....     ..+   +++.+++++|+.+++++++++...   +.+||++|+.+..+.+          
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~----------  153 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWP----------  153 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCC----------
Confidence            5699999999975321     112   234567999999999999887543   2489998864322111          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       ....|+.+|.+...+.+.++.+   +|+.+..+.|+.+.
T Consensus       154 -~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  192 (256)
T PRK07889        154 -AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIR  192 (256)
T ss_pred             -ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCccc
Confidence             1246899999988888887765   46777777776653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.60  E-value=1.9e-14  Score=129.63  Aligned_cols=158  Identities=15%  Similarity=0.019  Sum_probs=112.3

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+  ++||.++++.|+++|++|++++|+.. ..+.+..+..  ... ..+.+|++++.            
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999997  79999999999999999999988631 1222222211  123 56889998763            


Q ss_pred             ccCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      +.++|++|||||...+    ..    ..++++.++++|+.|++++++++.+.   +.+||++||.+...     +..   
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~-----~~~---  152 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK-----YVP---  152 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----CCC---
Confidence            3569999999997432    11    12345678999999999999987643   24899999864321     110   


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                        ....|+.+|.+...+.+.++.+   +|+.+..+-|+.+
T Consensus       153 --~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v  190 (274)
T PRK08415        153 --HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPI  190 (274)
T ss_pred             --cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence              1246999999998888888865   4677777777655

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.60  E-value=3.1e-14  Score=124.18  Aligned_cols=154  Identities=16%  Similarity=0.060  Sum_probs=112.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------ccCCCEE
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------LLEVDQI  184 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~~~vD~v  184 (290)
                      |+|||++|+||.++++.|+++|++|++++|+.....+.. .... ...++.++.+|++++.            +.++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999988642221111 1111 1235888999998764            2358999


Q ss_pred             EEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCC-ccccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTS-EVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~-~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||+||......    ...+++.++++|+.++.++++++.+    .+ .+|+++||. ++||.+           ....|+
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----------~~~~y~  149 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----------GQANYA  149 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------CCchhH
Confidence            99999753221    1234567899999999999998864    23 389999996 456532           124699


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..|.+.+.+++.+.++   .|+.+++++++.+
T Consensus       150 ~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~  181 (239)
T TIGR01830       150 ASKAGVIGFTKSLAKELASRNITVNAVAPGFI  181 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCC
Confidence            9998888777777654   4888888888765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3.1e-14  Score=123.75  Aligned_cols=156  Identities=17%  Similarity=0.087  Sum_probs=113.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------c--cCCCEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------L--LEVDQIY  185 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~--~~vD~vi  185 (290)
                      |++++||||+|+||.+++++|+++|++|++++|+.+...    ... ...++++.+|+++..        +  .++|++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~----~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA----ALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH----HHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            468999999999999999999999999999988643221    111 124567889987663        1  2489999


Q ss_pred             EcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCc-cccCCCCCCCCCCCCCCCChhh
Q 022900          186 HLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       186 h~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~-vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||......      ..++++.++++|+.++.++++++.+.    +.+++++||.. +++....        .+..+|+
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------~~~~~Y~  147 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG--------TTGWLYR  147 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC--------CCccccH
Confidence            9999753221      22346778999999999999998642    24799998864 4553211        1113699


Q ss_pred             hhHHHHHHHHHHHHHHh-CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF-RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~-gl~~~ilR~~~lr  284 (290)
                      ..|...+.+++.+..++ ++.+..++|+.+.
T Consensus       148 ~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~  178 (222)
T PRK06953        148 ASKAALNDALRAASLQARHATCIALHPGWVR  178 (222)
T ss_pred             HhHHHHHHHHHHHhhhccCcEEEEECCCeee
Confidence            99999999888887765 7778888887765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.60  E-value=2.6e-14  Score=128.55  Aligned_cols=159  Identities=14%  Similarity=0.007  Sum_probs=112.8

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+  ++||.++++.|+++|++|+++.|+. ...+.+..+.. ......+.+|++++.            +
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            567899999997  8999999999999999999887642 22222222211 123556889997763            3


Q ss_pred             cCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|++|||||....    ..    ..++++.++++|+.++.++++++.+.   +.+||++||.+...     +..    
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----~~p----  157 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-----VMP----  157 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-----CCC----
Confidence            469999999997532    11    12346778999999999999987653   24899999864321     110    


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                       ....|+.+|.+...+++.++.++   |+.+..+.|+.+
T Consensus       158 -~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v  195 (272)
T PRK08159        158 -HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPI  195 (272)
T ss_pred             -cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCc
Confidence             12469999999988888887764   677777777755

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=2.5e-14  Score=127.61  Aligned_cols=159  Identities=13%  Similarity=-0.013  Sum_probs=111.9

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCC-CCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||++  +||.++++.|+++|++|++.+|+. ...+.+.++... ....++.+|++++.            +
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            5678999999997  899999999999999999988752 222223222211 22235688998762            3


Q ss_pred             cCCCEEEEcccCCCCC----C----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV----H----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|++|||||.....    .    ..+++.+++++|+.+.+.+++++.+.   +.+||++||.+...     +..    
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-----~~~----  155 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-----VIP----  155 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-----CCC----
Confidence            5699999999964311    1    12345678999999999999876432   24899999965421     000    


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                       ....|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+
T Consensus       156 -~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v  193 (260)
T PRK06603        156 -NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPI  193 (260)
T ss_pred             -cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcC
Confidence             1247999999998888888865   4677777777765

>PRK06484 short chain dehydrogenase; Validated

Probab=99.59  E-value=2.2e-14  Score=139.96  Aligned_cols=158  Identities=16%  Similarity=0.131  Sum_probs=117.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+++||||+++||.++++.|+++|++|++++|+.....+...+.  ..++.++.+|++++.            +.++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999998654433333222  245778899998763            2469


Q ss_pred             CEEEEcccCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPV------HYKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       182 D~vih~Ag~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      |+||||||...+.      ...+++++++++|+.++.++++++.+.    +  .+||++||.......     .     .
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----~-----~  150 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----P-----K  150 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----C-----C
Confidence            9999999973221      112346778999999999999987532    2  389999997653211     1     1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+.+.+..+   .++.++.+.|+.+
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v  187 (520)
T PRK06484        151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYV  187 (520)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCc
Confidence            247999999998888888776   3788888887754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=2.5e-14  Score=127.69  Aligned_cols=159  Identities=12%  Similarity=-0.024  Sum_probs=111.1

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCC-CCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||  +++||.++++.|+++|++|++..|. .+..+.+.++... .....+.+|++++.            +
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVV-DKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc-HHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            56789999997  6799999999999999999998764 2223333333211 23457889998763            3


Q ss_pred             cCCCEEEEcccCCCCC----C-CC----CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV----H-YK----FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~----~-~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      .++|++|||||.....    . .+    ++++.++++|+.++..+++++..    .+.+||++||.+.+...     .  
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~-----~--  155 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI-----P--  155 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC-----C--
Confidence            4699999999975321    1 11    23456789999999998887543    22489999987543111     0  


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                         ....|+.+|.+.+.+++.++.+   +|+.+..+.|+.+
T Consensus       156 ---~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v  193 (261)
T PRK08690        156 ---NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPI  193 (261)
T ss_pred             ---CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence               1246999999988888877654   4777888877755

>PLN00015 protochlorophyllide reductase

Probab=99.59  E-value=1.6e-14  Score=132.08  Aligned_cols=164  Identities=12%  Similarity=0.068  Sum_probs=110.6

Q ss_pred             EEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCCEEE
Q 022900          120 VVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVDQIY  185 (290)
Q Consensus       120 lVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD~vi  185 (290)
                      +||||+++||.+++++|+++| ++|++++|+.....+....+. ...++.++.+|+.+..            ..++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            599999999999999999999 999999886433222222221 2346788899997763            24689999


Q ss_pred             EcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC---CeEEEEcCCccccCCC-C--CC---------
Q 022900          186 HLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG---ARFLLTSTSEVYGDPL-Q--HP---------  241 (290)
Q Consensus       186 h~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~---~riV~vSS~~vyg~~~-~--~~---------  241 (290)
                      ||||...+..     ..++++.++++|+.|++++++++.    +.+   .+||++||...+-... .  .+         
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            9999753221     223456789999999999877753    333   5999999976531100 0  00         


Q ss_pred             -------------CCCCCCCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeee
Q 022900          242 -------------QKETYWGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFIL  283 (290)
Q Consensus       242 -------------~~E~~~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~l  283 (290)
                                   ..+........|+.+|.+...+.+.+++++    |+.++.+.|+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  219 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCI  219 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcc
Confidence                         001111223468888888666666676653    688888888877

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.59  E-value=3.2e-14  Score=124.47  Aligned_cols=157  Identities=17%  Similarity=0.086  Sum_probs=110.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh-hhccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-VMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      |+++||||+|+||.++++.|+++|++|+++.|......+. ..... ...++.++.+|++++.            ..++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            5799999999999999999999999999988732111111 11111 2346889999998753            24589


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccc-cCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVY-GDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~~~p  252 (290)
                      +||||||...+...    .+++.+++++|+.++..+++++    ++.+ .+||++||.... |..           ....
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~  149 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQF-----------GQTN  149 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-----------Ccch
Confidence            99999997543222    2245667899999998876664    4444 389999996432 211           1246


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |+..|.+.+.+++.+.++   .++++..++|+.+.
T Consensus       150 y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~  184 (242)
T TIGR01829       150 YSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIA  184 (242)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCc
Confidence            899998888877777654   37888888887653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08017 oxidoreductase; Provisional

Probab=99.59  E-value=3.1e-14  Score=125.83  Aligned_cols=152  Identities=13%  Similarity=0.015  Sum_probs=107.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-------------cCCCE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------------LEVDQ  183 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------------~~vD~  183 (290)
                      ++|+||||+|+||.++++.|+++|++|++++|+.+..++ ..    ...++.+.+|+.+...             .++|.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MN----SLGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HH----hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            589999999999999999999999999999886432221 11    1246778888876521             35799


Q ss_pred             EEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHH----HHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLG----LAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~----a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      +|||||......    ..+++++++++|+.|+.++.+    .+++.+ .+||++||.+.+...          ....+|+
T Consensus        78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~~Y~  147 (256)
T PRK08017         78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST----------PGRGAYA  147 (256)
T ss_pred             EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC----------CCccHHH
Confidence            999999654322    122356789999999988744    445555 489999996433211          1235799


Q ss_pred             hhHHHHHHHHHHHH---HHhCCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFI---SQFRPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~---~~~gl~~~ilR~~~l  283 (290)
                      .+|...+.+++.+.   ...++++++++++.+
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~  179 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPI  179 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCc
Confidence            99999888777653   345889999998644

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.5e-14  Score=127.16  Aligned_cols=154  Identities=12%  Similarity=0.052  Sum_probs=111.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc----------------c
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL----------------L  179 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~----------------~  179 (290)
                      +++++||||+|+||.+++++|+++|++|++++|+...  +. .. ....++.++.+|+.+...                .
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~-~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL-AA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh-hh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            4689999999999999999999999999999986432  11 11 123468888999976521                1


Q ss_pred             CCCEEEEcccCCCCCC--C---CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH--Y---KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~--~---~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||...+..  .   .+++.+++++|+.|+..+++.+.+    .+ .+||++||.+.+...          ..
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~  146 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY----------AG  146 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC----------CC
Confidence            4799999999754321  1   123467889999998888776643    33 489999998765321          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHH--hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ--FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~--~gl~~~ilR~~~l  283 (290)
                      ..+|+..|...+.+++.+..+  .++++..++|+.+
T Consensus       147 ~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~  182 (243)
T PRK07023        147 WSVYCATKAALDHHARAVALDANRALRIVSLAPGVV  182 (243)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence            357999999999999888865  4777777777654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.59  E-value=4.3e-14  Score=124.46  Aligned_cols=155  Identities=13%  Similarity=0.060  Sum_probs=107.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh-ccc---CCCCeEEEEccccccc------------ccCCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-HHF---GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~---~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      ++||||+|+||.++++.|+++|++|++++|+.....+.+. ...   ....+..+.+|+.++.            +.++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999986222222221 111   1123456778987653            34689


Q ss_pred             EEEEcccCCCCCCCC----CChHHHHHHHHH----HHHHHHHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVHYK----FNPVKTIKTNVV----GTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~----~~~~~~~~~Nv~----gt~~ll~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||........    ++..+++++|+.    ++..+++++++.+ .+||++||...+....          ....|
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~----------~~~~Y  151 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP----------DYTAY  151 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC----------CCchh
Confidence            999999975432221    234567899998    5555666666655 4899999987764321          12369


Q ss_pred             hhhHHHHHHHHHHHHHHh-----CCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQF-----RPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~l  283 (290)
                      +..|.+.+.+++.++.++     ++.++.+.|+.+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v  186 (251)
T PRK07069        152 NASKAAVASLTKSIALDCARRGLDVRCNSIHPTFI  186 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCcEEEEEEeeccc
Confidence            999999888888887654     355666666654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.59  E-value=1.9e-14  Score=128.26  Aligned_cols=160  Identities=13%  Similarity=0.021  Sum_probs=114.5

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCC--CchhhhhcccC-CCCeEEEEccccccc-----------
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFT--GRKENVMHHFG-NPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~-~~~v~~~~~D~~~~~-----------  177 (290)
                      .++|+++||||+  ++||.+++++|+++|++|++..|..+  +..+.+.++.. ..++.++.+|++++.           
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            467899999986  89999999999999999988876432  22222332221 134667889998763           


Q ss_pred             -ccCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                       ++++|++|||||....    ..    ..+++++++++|+.++..+++++.+.   +.+||++||.....     +..  
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----~~~--  156 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----AIP--  156 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----CCc--
Confidence             3469999999997531    11    12345778999999999999987542   34899999964321     111  


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                         ....|+.+|.+.+.+.+.++.++   |+.+..+.|+.+
T Consensus       157 ---~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v  194 (258)
T PRK07370        157 ---NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPI  194 (258)
T ss_pred             ---ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcc
Confidence               12479999999999999888765   677888888765

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.6e-14  Score=125.17  Aligned_cols=156  Identities=14%  Similarity=0.089  Sum_probs=101.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ...++++++||||+|+||.+++++|+++|++|++++|+.....+.   .... ....+.+|+++..     +.++|++||
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~~~-~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---NDES-PNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hccC-CCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            346778999999999999999999999999999999864211111   1111 2256778887653     567999999


Q ss_pred             cccCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhH
Q 022900          187 LACPASPVH-YKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYF  257 (290)
Q Consensus       187 ~Ag~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~--------~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k  257 (290)
                      |||...... ..+++.+++++|+.|+.++++++.+.        +..+++.||.+.+..    +       ....|+.+|
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~----~-------~~~~Y~aSK  154 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP----A-------LSPSYEISK  154 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC----C-------CCchhHHHH
Confidence            999643222 23456788999999999999986431        223444454432211    0       123699999


Q ss_pred             HHHHHHHHHHHH-------HhCCCeeEEEeeee
Q 022900          258 FSFSLIFLVFIS-------QFRPSRKACRFFIL  283 (290)
Q Consensus       258 ~~~e~~~~~~~~-------~~gl~~~ilR~~~l  283 (290)
                      .+.+.+. .+.+       +.++.+..+.++.+
T Consensus       155 aal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~  186 (245)
T PRK12367        155 RLIGQLV-SLKKNLLDKNERKKLIIRKLILGPF  186 (245)
T ss_pred             HHHHHHH-HHHHHHHHhhcccccEEEEecCCCc
Confidence            9864432 3333       23555555555443

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.3e-14  Score=124.11  Aligned_cols=149  Identities=13%  Similarity=0.093  Sum_probs=108.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc---------cCCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL---------LEVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---------~~vD~vih~  187 (290)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.    +.......++.++.+|+.++..         .++|++|||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD----LEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            369999999999999999999999999999875322    2111111235678899987631         258999999


Q ss_pred             ccCCC----CC--C---CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          188 ACPAS----PV--H---YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       188 Ag~~~----~~--~---~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||...    +.  .   ..+++.+++++|+.++.++++++.+.   +.+||++||.+.       +       ....|+.
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------~-------~~~~Y~a  142 (223)
T PRK05884         77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------P-------AGSAEAA  142 (223)
T ss_pred             CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-------C-------CccccHH
Confidence            98521    11  0   12356778999999999999997653   248999998651       0       1247999


Q ss_pred             hHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          256 YFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +|.+.+.+++.+..+   +|+.+..+.|+.+
T Consensus       143 sKaal~~~~~~la~e~~~~gI~v~~v~PG~v  173 (223)
T PRK05884        143 IKAALSNWTAGQAAVFGTRGITINAVACGRS  173 (223)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence            999998888888775   4677777777755

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=6.1e-14  Score=125.49  Aligned_cols=159  Identities=16%  Similarity=0.027  Sum_probs=112.5

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||++  +||.++++.|+++|++|++++|+. ...+.+.++.. ...+..+.+|++++.            +
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            5678999999985  999999999999999999988752 22233332221 234667889998763            3


Q ss_pred             cCCCEEEEcccCCCCCC---------CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH---------YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~---------~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      .++|++|||||......         ..++++.++++|+.|...+.+++...   +.+||++||.+...     +..   
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----~~~---  154 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----AIP---  154 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----CCC---
Confidence            46999999999643211         11234567899999999998886532   24899999865321     111   


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                        ....|+.+|.+.+.+++.++.++   |+.+..+-|+.+
T Consensus       155 --~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v  192 (262)
T PRK07984        155 --NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI  192 (262)
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcc
Confidence              12479999999999998888764   677777777654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=4.7e-14  Score=125.91  Aligned_cols=159  Identities=13%  Similarity=-0.047  Sum_probs=111.8

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||  +++||.+++++|+++|++|++++|.. +..+.+.++.. ......+.+|++++.            +
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            46789999996  67999999999999999999886531 22233322211 122346788998763            3


Q ss_pred             cCCCEEEEcccCCCCC---------CCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV---------HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      +++|++|||||.....         ...++++..+++|+.++..+++++.+.-   .+||++||.+..-     +..   
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----~~~---  154 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----VVP---  154 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----CCC---
Confidence            5699999999975321         0123456689999999999999876532   4899999865321     111   


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                        ....|+.+|.+...+.+.++.++   |+.+..+-|+.+
T Consensus       155 --~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v  192 (260)
T PRK06997        155 --NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPI  192 (260)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence              12469999999988888888754   677777777754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.3e-14  Score=123.10  Aligned_cols=158  Identities=15%  Similarity=0.134  Sum_probs=112.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc----------cCCCEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL----------LEVDQIY  185 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~----------~~vD~vi  185 (290)
                      +++|+||||+|+||.++++.|+++|++|++++|+.....+ +..   ..++.+..+|+.++..          .++|+||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            3689999999999999999999999999999987544322 222   2356677788877531          2599999


Q ss_pred             EcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHHc---C-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          186 HLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV---G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       186 h~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||||...+..      ...++..++++|+.++.++++++.+.   + ..++++||.  +|.....+.     ....+|+.
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~~~-----~~~~~Y~~  149 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELPDG-----GEMPLYKA  149 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccCCC-----CCccchHH
Confidence            9999753321      11234567899999999999987542   2 478888875  332211111     12247999


Q ss_pred             hHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|.+.+.+++.+..++   ++.+..++|+.+.
T Consensus       150 sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~  181 (225)
T PRK08177        150 SKAALNSMTRSFVAELGEPTLTVLSMHPGWVK  181 (225)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeEEEEEcCCcee
Confidence            9999999998888764   5677788887764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=1.5e-13  Score=122.19  Aligned_cols=161  Identities=11%  Similarity=-0.008  Sum_probs=113.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCC-C------chh---hhhccc--CCCCeEEEEccccccc--
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFT-G------RKE---NVMHHF--GNPNFELIRHDVVEPL--  177 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~-~------~~~---~~~~~~--~~~~v~~~~~D~~~~~--  177 (290)
                      +++|+++||||+|  +||.+++++|+++|++|+++++... +      ..+   ...+.+  ...++.++.+|+.+..  
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            6789999999995  8999999999999999998754311 0      111   111111  2346888899998753  


Q ss_pred             ----------ccCCCEEEEcccCCCCCC-C---CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCC
Q 022900          178 ----------LLEVDQIYHLACPASPVH-Y---KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPL  238 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~~~~-~---~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~  238 (290)
                                +.++|+||||||...... .   .++++.++++|+.+...+.+++.    +.+ .+||++||...+... 
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-  162 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM-  162 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC-
Confidence                      345899999999753322 1   12356689999999998876543    332 489999997643211 


Q ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          239 QHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       239 ~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                               .....|+.+|.+.+.+++.+..+   ++++++.++|+.+.
T Consensus       163 ---------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~  202 (256)
T PRK12859        163 ---------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTD  202 (256)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEcccc
Confidence                     12357999999998888888765   57888888887653

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.57  E-value=6.6e-14  Score=125.99  Aligned_cols=164  Identities=15%  Similarity=0.094  Sum_probs=111.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-----------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-----------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-----------~~~vD~  183 (290)
                      +|+++|||| |+||.++++.|. +|++|++++|+.....+...++. ...++.++.+|++++.           +.++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            468999997 799999999996 89999999986433322222221 1346888999998763           246999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCC-C----CC---CC---------
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPL-Q----HP---QK---------  243 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~-~----~~---~~---------  243 (290)
                      ||||||...   ...++++++++|+.|+.++++++.+.   +.++|++||.+...... .    ..   .+         
T Consensus        80 li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (275)
T PRK06940         80 LVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF  156 (275)
T ss_pred             EEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence            999999742   24568889999999999999987643   23677777765421110 0    00   00         


Q ss_pred             --CCCC-CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          244 --ETYW-GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       244 --E~~~-~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                        +... .....|+.+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~  203 (275)
T PRK06940        157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIIS  203 (275)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCc
Confidence              0000 123469999999888888776653   6778888887653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.8e-14  Score=125.01  Aligned_cols=157  Identities=11%  Similarity=0.102  Sum_probs=109.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc------------c--CC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL------------L--EV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~------------~--~v  181 (290)
                      +|+++||||+|+||++++++|+++|++|++++|......+.+... ...+++++.+|++++..            .  +.
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            368999999999999999999999999999998642221221111 13468889999987631            1  12


Q ss_pred             --CEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          182 --DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       182 --D~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                        +++|||||...+..     ..+++.+.+++|+.+...+++.+..    .+  .+||++||...+..          ..
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~  149 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP----------YF  149 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC----------CC
Confidence              28999999754322     1233566788999998887776533    22  48999999765321          12


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF-----RPSRKACRFFIL  283 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~l  283 (290)
                      ...+|+.+|.+.+.+++.+..+.     ++.+..++|+.+
T Consensus       150 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v  189 (251)
T PRK06924        150 GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVM  189 (251)
T ss_pred             CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCcc
Confidence            33589999999999988887653     566777777655

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1e-13  Score=123.10  Aligned_cols=160  Identities=11%  Similarity=-0.012  Sum_probs=114.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc--------ccCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL--------LLEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~--------~~~vD~  183 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+....+.  ...++.++.+|++++.        +.++|+
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            567899999999999999999999999999999986433332222221  1346888999998763        356999


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      +|||||.......    .++++.++++|+.+.+++++++.    +.+ .+||++||.....     +     ......|+
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----~-----~~~~~~y~  154 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----P-----DADYICGS  154 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----C-----CCCchHhH
Confidence            9999997532222    23456789999999999988863    333 3899998864321     1     01123577


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..|.+.+.+++.+..+   +|+++..+.|+.+
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v  186 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPV  186 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCcc
Confidence            7888777777777653   4788888888765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.2e-13  Score=120.95  Aligned_cols=158  Identities=9%  Similarity=0.015  Sum_probs=112.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc-
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL-  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~-  179 (290)
                      .++|+++||||+++||.+++++|+++|++|++++|+.....+...++. ...++..+.+|+.++.            +. 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999986544333332221 1345777888887652            34 


Q ss_pred             CCCEEEEcccCCCCC-CC-C---CChHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPV-HY-K---FNPVKTIKTNVVGTLNMLGLA----KRVG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~-~~-~---~~~~~~~~~Nv~gt~~ll~a~----~~~~--~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|++|||||..... .. +   +++.+.+++|+.++..+++.+    ++.+  ..||++||...+.             
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-------------  149 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-------------  149 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-------------
Confidence            699999999853222 11 1   233557788999988876654    3333  4899999854321             


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+.+.++.+   +++.+..+.|+.+.
T Consensus       150 ~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~  188 (227)
T PRK08862        150 DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFS  188 (227)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCc
Confidence            1246999999988888877764   47888888887653

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.6e-13  Score=125.53  Aligned_cols=162  Identities=12%  Similarity=0.001  Sum_probs=111.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC---------chhhhhccc--CCCCeEEEEccccccc-----
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---------RKENVMHHF--GNPNFELIRHDVVEPL-----  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~--~~~~v~~~~~D~~~~~-----  177 (290)
                      +++|+++||||+++||.+++++|+++|++|++++|+...         ..+.+.+.+  ...++.++.+|++++.     
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            578999999999999999999999999999999986421         111111111  1235778899998763     


Q ss_pred             -------ccCCCEEEEcc-cCCC-----CCCCC---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-cc
Q 022900          178 -------LLEVDQIYHLA-CPAS-----PVHYK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YG  235 (290)
Q Consensus       178 -------~~~vD~vih~A-g~~~-----~~~~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg  235 (290)
                             ++++|++|||| |...     ....+   +++.+++++|+.+++.+++++.+    .+ .+||++||... ++
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~  165 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence                   34699999999 7421     11111   23556889999999999888643    22 48999998543 32


Q ss_pred             CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          236 DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       236 ~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ...   .     .....|+.+|.+...+.+.++.++   |+.+..+.|+.+
T Consensus       166 ~~~---~-----~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v  208 (305)
T PRK08303        166 ATH---Y-----RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWL  208 (305)
T ss_pred             CcC---C-----CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcc
Confidence            110   0     012369999999888888777654   677777777654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.55  E-value=6.2e-14  Score=115.97  Aligned_cols=145  Identities=14%  Similarity=0.155  Sum_probs=107.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC--CCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF--FTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~--~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      |+++||||+++||.+++++|+++|. .|+++.|+  .+...+...++. ...++.++.+|++++.            ...
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5899999999999999999999965 67778876  122222222222 3468999999998763            246


Q ss_pred             CCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          181 VDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      +|++|||||........+    +.++++++|+.+...+.+++...+ .+||++||.+..-...          ...+|..
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y~a  150 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSP----------GMSAYSA  150 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSST----------TBHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCC----------CChhHHH
Confidence            999999999866444333    345689999999999999988744 4999999976542110          1137999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 022900          256 YFFSFSLIFLVFISQF  271 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~  271 (290)
                      .|.+.+.+++.+++++
T Consensus       151 skaal~~~~~~la~e~  166 (167)
T PF00106_consen  151 SKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999888763

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.54  E-value=2.9e-13  Score=111.64  Aligned_cols=156  Identities=15%  Similarity=0.114  Sum_probs=111.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhh---hccc-CCCCeEEEEccccccc------------cc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENV---MHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++++||||+|+||.+++++|+++|+ .|++++|+........   .... ...++.++.+|+.++.            +.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997 6788877643322111   1111 2346788899997652            23


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCc-cccCCCCCCCCCCCCCCCChh
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~py  253 (290)
                      .+|.|||+||......    ..++++.++++|+.++.++++++++.+ .++|++||.+ .|+..           ...+|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~-----------~~~~y  149 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP-----------GQANY  149 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC-----------Cchhh
Confidence            4799999999643222    123456789999999999999997766 4899988864 34432           12478


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      +..|...+.+++.+ +..+++++.+.++.++
T Consensus       150 ~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~  179 (180)
T smart00822      150 AAANAFLDALAAHR-RARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence            99998888888554 4568888888776543

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.54  E-value=2.3e-13  Score=128.71  Aligned_cols=154  Identities=15%  Similarity=0.075  Sum_probs=101.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      ..++|+|+||||+|+||.+++++|+++|++|++++|+.+...+....  ....+..+.+|+.++.     ++++|++|||
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            35789999999999999999999999999999998854322221111  1224667888988764     4679999999


Q ss_pred             ccCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHH----cC----C-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhH
Q 022900          188 ACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKR----VG----A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYF  257 (290)
Q Consensus       188 Ag~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~----~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k  257 (290)
                      ||..... ...+++++++++|+.|+.++++++.+    .+    . .+|++|++.. +     +      .....|+.+|
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~-----~------~~~~~Y~ASK  320 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-N-----P------AFSPLYELSK  320 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-c-----C------CCchHHHHHH
Confidence            9964322 12234577899999999999998743    22    2 3455554221 1     0      0112599999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEe
Q 022900          258 FSFSLIFLVFISQFRPSRKACRF  280 (290)
Q Consensus       258 ~~~e~~~~~~~~~~gl~~~ilR~  280 (290)
                      .+...+.+-.....++.+..+.+
T Consensus       321 aAl~~l~~l~~~~~~~~I~~i~~  343 (406)
T PRK07424        321 RALGDLVTLRRLDAPCVVRKLIL  343 (406)
T ss_pred             HHHHHHHHHHHhCCCCceEEEEe
Confidence            98877654333333433443333

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=2.6e-13  Score=130.29  Aligned_cols=157  Identities=15%  Similarity=0.063  Sum_probs=113.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++++++||||+|+||.++++.|+++|++|+++++..  ..+.+.+........++.+|++++.            ..++
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA--AGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999999999999999999999999999998742  2222222222223456788887663            2368


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEcCCccc-cCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-----GARFLLTSTSEVY-GDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~riV~vSS~~vy-g~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||......    ..++++.++++|+.|+.++++++...     +.+||++||.+.+ |..           ...
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----------~~~  354 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----------GQT  354 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------CCh
Confidence            99999999754332    12345678999999999999998653     2489999997643 322           124


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +|+..|...+.+.+.+..+   .|+.+..+.++.+
T Consensus       355 ~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i  389 (450)
T PRK08261        355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFI  389 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcC
Confidence            7999998877777777654   4778888877654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.53  E-value=2.5e-13  Score=122.08  Aligned_cols=163  Identities=14%  Similarity=0.059  Sum_probs=118.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc-----------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~-----------  177 (290)
                      .+.+|+++||||+.+||++++.+|++.|++|++.+|+.+...+....+.    ...++..+.+|+.++.           
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999997665444443332    2456889999997552           


Q ss_pred             --ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHH-HHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVG-TLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKE  244 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g-t~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E  244 (290)
                        ++++|++|||||......     .++.++.++++|+.| ++.+.+++.    +.+ ..|+++||.+-+.....     
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~-----  159 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG-----  159 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC-----
Confidence              467999999999765442     234567799999996 566665543    222 37999988765432111     


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                          ....|+.+|.+.+.+.+..+.+   +|+++..+=|+.+.
T Consensus       160 ----~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~  198 (270)
T KOG0725|consen  160 ----SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVK  198 (270)
T ss_pred             ----CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEe
Confidence                1146999999988888887764   47777777775443

>PRK05599 hypothetical protein; Provisional

Probab=99.52  E-value=3.2e-13  Score=119.45  Aligned_cols=157  Identities=10%  Similarity=0.080  Sum_probs=109.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------ccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      |+++||||+++||.+++++|+ +|++|++++|+.+...+...++.  +...+.++.+|+.++.            .+++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 59999999986544333322222  2234788899998763            24699


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ++|||||.......    ..+..+++++|+.+..++++++    .+.+  .+||++||.+.+-..     .     ....
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-----~-----~~~~  149 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR-----R-----ANYV  149 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-----c-----CCcc
Confidence            99999997533221    1223456789999988776554    3332  489999997543111     0     1246


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.++.++   |+.+..+-|+.+.
T Consensus       150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~  184 (246)
T PRK05599        150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVI  184 (246)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCccc
Confidence            9999999888888888764   6666667676653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.4e-13  Score=114.51  Aligned_cols=140  Identities=18%  Similarity=0.183  Sum_probs=102.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vih~A  188 (290)
                      |+++||||+|+||.++++.|+++ ++|++++|+..                .+.+|++++.        +.++|+|||||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a   63 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA   63 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999999999 99999987431                2456766542        34799999999


Q ss_pred             cCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHH
Q 022900          189 CPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFS  261 (290)
Q Consensus       189 g~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e  261 (290)
                      |.......    .+++.+.+++|+.++.++++++.+.   +.+|+++||.....     +..     ....|+.+|.+.+
T Consensus        64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----~~~-----~~~~Y~~sK~a~~  133 (199)
T PRK07578         64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----PIP-----GGASAATVNGALE  133 (199)
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----CCC-----CchHHHHHHHHHH
Confidence            96432221    2345667999999999999987653   24799998865321     111     1247999999988


Q ss_pred             HHHHHHHHH--hCCCeeEEEeeee
Q 022900          262 LIFLVFISQ--FRPSRKACRFFIL  283 (290)
Q Consensus       262 ~~~~~~~~~--~gl~~~ilR~~~l  283 (290)
                      .+.+.+..+  .|+.+..+.|+.+
T Consensus       134 ~~~~~la~e~~~gi~v~~i~Pg~v  157 (199)
T PRK07578        134 GFVKAAALELPRGIRINVVSPTVL  157 (199)
T ss_pred             HHHHHHHHHccCCeEEEEEcCCcc
Confidence            888888775  4667777776654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.51  E-value=3.4e-13  Score=120.69  Aligned_cols=160  Identities=15%  Similarity=0.077  Sum_probs=120.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc--------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--------------L  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--------------~  179 (290)
                      ..+|.|+|||+..+.|..+|++|.++|+.|.+-.-..+.. +.+......++...+..|+++++.              .
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga-e~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA-ESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH-HHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            5678899999999999999999999999999987433222 333333336788889999998853              2


Q ss_pred             CCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLA----KRVGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +.=.||||||+.....     ..+++..++++|+.|++.+++++    +++..|||++||..-  ....        .-.
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R~~~--------p~~  175 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--RVAL--------PAL  175 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--CccC--------ccc
Confidence            4779999999653222     12456778999999999998886    345569999999642  1100        023


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .||.++|.+.|.+...+.++   +|.++.++-|++.+
T Consensus       176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~  212 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFK  212 (322)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccc
Confidence            58999999998888877754   69999999998654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.51  E-value=2.1e-13  Score=121.08  Aligned_cols=156  Identities=10%  Similarity=-0.036  Sum_probs=110.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----CCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccccc------------
Q 022900          118 RIVVTGGAGFVGSHLVDRLIA----RGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPLL------------  178 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~------------  178 (290)
                      .++||||+++||.+++++|++    +|++|++++|+.+...+...++.   ...++.++.+|+++...            
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    79999999987544433333222   23468889999987631            


Q ss_pred             c----CCCEEEEcccCCCCC--CC-----CCChHHHHHHHHHHHHHHHHHHHH----c-C--CeEEEEcCCccccCCCCC
Q 022900          179 L----EVDQIYHLACPASPV--HY-----KFNPVKTIKTNVVGTLNMLGLAKR----V-G--ARFLLTSTSEVYGDPLQH  240 (290)
Q Consensus       179 ~----~vD~vih~Ag~~~~~--~~-----~~~~~~~~~~Nv~gt~~ll~a~~~----~-~--~riV~vSS~~vyg~~~~~  240 (290)
                      +    +.|+||||||.....  ..     .+++++++++|+.|+..+++++.+    . +  .+||++||.+.+...   
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~---  158 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF---  158 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC---
Confidence            1    126999999964321  11     123567899999999988877643    2 2  389999997654211   


Q ss_pred             CCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          241 PQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       241 ~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                             .....|+.+|.+.+.+++.+..++   ++.+..+.|+.+
T Consensus       159 -------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v  197 (256)
T TIGR01500       159 -------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVL  197 (256)
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcc
Confidence                   112479999999999898887764   667777777655

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.51  E-value=6.7e-13  Score=117.06  Aligned_cols=158  Identities=15%  Similarity=0.060  Sum_probs=114.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc--CC-CCeEEEEccccc-cc-----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF--GN-PNFELIRHDVVE-PL-----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~--~~-~~v~~~~~D~~~-~~-----------  177 (290)
                      .++|+|+||||+++||.++++.|+++|+.|+++.+..... .+......  .. ..+.+...|+++ ..           
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            5778999999999999999999999999998887764331 11111111  11 357778889986 42           


Q ss_pred             -ccCCCEEEEcccCCCC--CC---CCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASP--VH---YKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~--~~---~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                       ++++|++|||||....  ..   ..++++.++++|+.|...+++++.....  +||++||.... .....         
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---------  152 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---------  152 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---------
Confidence             3459999999997542  11   1235677899999999999986554444  99999998654 22211         


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                      ..+|+.+|.+...+.+.+..+   +|+.+..+-|+
T Consensus       153 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG  187 (251)
T COG1028         153 QAAYAASKAALIGLTKALALELAPRGIRVNAVAPG  187 (251)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEec
Confidence            358999999988888877744   57777777776

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.50  E-value=5.1e-13  Score=122.02  Aligned_cols=161  Identities=12%  Similarity=0.040  Sum_probs=107.0

Q ss_pred             CCCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----------CC----CCeEEEEcccc--
Q 022900          113 KRKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----------GN----PNFELIRHDVV--  174 (290)
Q Consensus       113 ~~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----------~~----~~v~~~~~D~~--  174 (290)
                      .+++|+++||||  +++||.++++.|+++|++|++ .|...+..+......          ..    ....++.+|+.  
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            378999999999  899999999999999999988 554332211111110          00    11345666661  


Q ss_pred             ------c------------------------ccccCCCEEEEcccCCCC---CC---CCCChHHHHHHHHHHHHHHHHHH
Q 022900          175 ------E------------------------PLLLEVDQIYHLACPASP---VH---YKFNPVKTIKTNVVGTLNMLGLA  218 (290)
Q Consensus       175 ------~------------------------~~~~~vD~vih~Ag~~~~---~~---~~~~~~~~~~~Nv~gt~~ll~a~  218 (290)
                            +                        +.++++|++|||||....   +.   ..+++.+++++|+.+.+.+++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence                  1                        023469999999975321   11   22356778999999999999987


Q ss_pred             HHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeee
Q 022900          219 KRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFIL  283 (290)
Q Consensus       219 ~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~l  283 (290)
                      .+.   +.+||++||....-..   +      .....|+.+|.+.+.+.+.++.++    |+.+..+-|+.+
T Consensus       165 ~p~m~~~G~II~isS~a~~~~~---p------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v  227 (303)
T PLN02730        165 GPIMNPGGASISLTYIASERII---P------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPL  227 (303)
T ss_pred             HHHHhcCCEEEEEechhhcCCC---C------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCc
Confidence            553   2489999997543111   0      001269999999999998888764    456666666654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.45  E-value=5.9e-13  Score=112.89  Aligned_cols=117  Identities=15%  Similarity=0.172  Sum_probs=88.0

Q ss_pred             CCCEEEEEcC-CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-------------ccC
Q 022900          115 KGLRIVVTGG-AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-------------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGa-sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-------------~~~  180 (290)
                      ..|.|+|||+ +|+||.++++++.++|+.|++..|..+...+...    ...+.....|+++++             .++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~----~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI----QFGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH----hhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            3468999996 7899999999999999999999987655544321    235677788887763             346


Q ss_pred             CCEEEEcccCCCCCC-CCC---ChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCcccc
Q 022900          181 VDQIYHLACPASPVH-YKF---NPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYG  235 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-~~~---~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vyg  235 (290)
                      +|++|||||..-... .+.   ..++.+++|+.|.++|.++..    +....||++.|..+|-
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v  144 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV  144 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe
Confidence            999999999753322 222   246689999999999998864    3334899999988763

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.44  E-value=4.3e-12  Score=110.91  Aligned_cols=153  Identities=15%  Similarity=0.158  Sum_probs=103.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vih  186 (290)
                      |+|+||||+|+||++++++|+++|  ..|+...|....  +     ....++.++.+|+.+..        ++++|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~-----~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D-----FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c-----cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            589999999999999999999985  556655553211  1     12357888999997663        357999999


Q ss_pred             cccCCCCCC------C-C---CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          187 LACPASPVH------Y-K---FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       187 ~Ag~~~~~~------~-~---~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |||......      . .   +.+...+++|+.++..+++++.+.    + .+++++||..  |.....+     .....
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~~-----~~~~~  146 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDNR-----LGGWY  146 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccCC-----CCCcc
Confidence            999753211      1 1   124567999999999998887542    2 3789998732  2111111     11224


Q ss_pred             hhhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF-----RPSRKACRFFIL  283 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~l  283 (290)
                      +|+.+|...+.+++.+..++     ++.+..+.|+.+
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v  183 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTT  183 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccce
Confidence            79999999988888888653     455556666554

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.43  E-value=1.4e-12  Score=123.51  Aligned_cols=165  Identities=23%  Similarity=0.227  Sum_probs=117.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCc--hhhhhccc--------------CCCCeEEEEcccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGR--KENVMHHF--------------GNPNFELIRHDVV  174 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~--~~~~~~~~--------------~~~~v~~~~~D~~  174 (290)
                      .++|+|+|||||||+|+.++++|++.-.   +++++-|.....  .+.+.+..              .-.++..+.+|+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            6789999999999999999999998642   778887754322  11111110              1146788889998


Q ss_pred             cccc-----------cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCC---C
Q 022900          175 EPLL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDP---L  238 (290)
Q Consensus       175 ~~~~-----------~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~---~  238 (290)
                      ++.+           .++|+|||+||.   ..+.+.......+|+.||.++++.|++...  -++++||+.+....   .
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAt---vrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~  166 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAAT---VRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIE  166 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeee---eccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccc
Confidence            7754           369999999985   455666677889999999999999998764  79999999764211   1


Q ss_pred             CCCC--------------CCCCC-------------CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          239 QHPQ--------------KETYW-------------GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       239 ~~~~--------------~E~~~-------------~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      +.++              +|...             +..+-|.-+|...|.+++.+..  +++.+|+||+++
T Consensus       167 E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI  236 (467)
T KOG1221|consen  167 EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSII  236 (467)
T ss_pred             ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCce
Confidence            1111              11110             1245588888888887776655  899999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.42  E-value=1.1e-12  Score=109.86  Aligned_cols=118  Identities=18%  Similarity=0.088  Sum_probs=92.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .+.+.++||||+++||++++..|++.|++|.+.+++....++....+-+..+-..+.+|+.++.            +..+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999999877655444444433356667788887652            3469


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEcCC
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTS  231 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~------~-~riV~vSS~  231 (290)
                      +++|||||++....    ..++|++.+.+|+.|++.+.+++.+.      . -+||.+||+
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI  152 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI  152 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhh
Confidence            99999999874333    45679999999999999999987543      1 289999996

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=5.6e-12  Score=112.79  Aligned_cols=143  Identities=19%  Similarity=0.138  Sum_probs=103.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------ccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .+|+|||||.+||.+++.++..+|++|+++.|+.....+...++.   ...++.+..+|+.+.+            ...+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            589999999999999999999999999999987554444443332   1233668888884431            2358


Q ss_pred             CEEEEcccCCCCCCCCCCh----HHHHHHHHHHHHHHHHHHHHcC---C---eEEEEcCCc-cccCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHYKFNP----VKTIKTNVVGTLNMLGLAKRVG---A---RFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~----~~~~~~Nv~gt~~ll~a~~~~~---~---riV~vSS~~-vyg~~~~~~~~E~~~~~~  250 (290)
                      |.+|||||...+..+++..    +.++++|..|+.|+++++..+.   .   +|+++||+. .+|...+           
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy-----------  182 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY-----------  182 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc-----------
Confidence            9999999988877766543    5579999999999999865432   1   799999874 3443333           


Q ss_pred             ChhhhhHHHHHHHHHHHHHH
Q 022900          251 NPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~  270 (290)
                      .+|..+|.+...+.+...++
T Consensus       183 saYs~sK~alrgLa~~l~qE  202 (331)
T KOG1210|consen  183 SAYSPSKFALRGLAEALRQE  202 (331)
T ss_pred             cccccHHHHHHHHHHHHHHH
Confidence            35666777665556555554

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.40  E-value=9.5e-13  Score=112.72  Aligned_cols=115  Identities=23%  Similarity=0.240  Sum_probs=90.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch--hhhhcccCCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..||++++||+.|+||.++.++|+++|..+.+++.+.+..+  .+++.......+.++.+|+++..            ++
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999998888765543332  23444446678999999998752            34


Q ss_pred             CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHH-----HcC-C--eEEEEcCCc
Q 022900          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK-----RVG-A--RFLLTSTSE  232 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~-----~~~-~--riV~vSS~~  232 (290)
                      .+|++||+||+.    .+++++.++++|+.|..+-..++.     +.| +  -||.+||..
T Consensus        83 ~iDIlINgAGi~----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~  139 (261)
T KOG4169|consen   83 TIDILINGAGIL----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA  139 (261)
T ss_pred             ceEEEEcccccc----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc
Confidence            699999999964    367899999999999888766653     232 2  699999864

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.37  E-value=7.7e-12  Score=105.66  Aligned_cols=144  Identities=18%  Similarity=0.160  Sum_probs=102.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ..+-+|+||||+.+||.+++++|.+.|.+||+..|+..+..+...   ..+.+.-..+|+.|..            ...+
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~---~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA---ENPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh---cCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            467799999999999999999999999999999886544444333   3467777788887764            2348


Q ss_pred             CEEEEcccCCCCCCC------CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY------KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       182 D~vih~Ag~~~~~~~------~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +++|||||+......      .++.++.+++|+.+++.++.++.+    .. ..||.+||.-.+-.-..          .
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~----------~  149 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS----------T  149 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc----------c
Confidence            999999997643332      223456789999999999888643    32 48999999644321111          1


Q ss_pred             ChhhhhHHHHHHHHHHHHHH
Q 022900          251 NPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~  270 (290)
                      --|..+|.+..-+...++.+
T Consensus       150 PvYcaTKAaiHsyt~aLR~Q  169 (245)
T COG3967         150 PVYCATKAAIHSYTLALREQ  169 (245)
T ss_pred             ccchhhHHHHHHHHHHHHHH
Confidence            14888888765555555544

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.35  E-value=1.8e-12  Score=112.13  Aligned_cols=169  Identities=22%  Similarity=0.235  Sum_probs=134.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc------CCCCeEEEEcccccccc-------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF------GNPNFELIRHDVVEPLL-------L  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~------~~~~v~~~~~D~~~~~~-------~  179 (290)
                      ...|..+|||-+|.=|+.|++-|+.+|++|.++.|.+..- ...+.++.      ......+.-+|++|...       .
T Consensus        26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            4457899999999999999999999999999998764332 22233332      23457788899998742       3


Q ss_pred             CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC----CeEEEEcCCccccCCCCCCCCCCCC-CCCChhh
Q 022900          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIG  254 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~----~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~  254 (290)
                      +++-|+|+|+++....+-+-++.+-++...|+++++++.+..+    +||-..||+..||.....|++|..+ .|.+||+
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa  185 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYA  185 (376)
T ss_pred             CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhH
Confidence            6899999999876555666677788899999999999987765    4899999999999999999999764 7889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeee
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFI  282 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~  282 (290)
                      ..|.+.-.++..|.+.|++=.|.--+||
T Consensus       186 ~aKmy~~WivvNyREAYnmfAcNGILFN  213 (376)
T KOG1372|consen  186 AAKMYGYWIVVNYREAYNMFACNGILFN  213 (376)
T ss_pred             HhhhhheEEEEEhHHhhcceeeccEeec
Confidence            9999988888888888887666555544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.33  E-value=1.8e-11  Score=111.63  Aligned_cols=161  Identities=10%  Similarity=-0.033  Sum_probs=103.3

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCC-------CCchhhhhc-----------------cc-CCCC
Q 022900          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFF-------TGRKENVMH-----------------HF-GNPN  165 (290)
Q Consensus       113 ~~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~-------~~~~~~~~~-----------------~~-~~~~  165 (290)
                      ..++|+++||||+  ++||+++++.|+++|++|++.++..       ....+....                 .. .-..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            3678999999995  9999999999999999999976420       000000000                 00 0011


Q ss_pred             eEEEEccccc--------------------ccccCCCEEEEcccCCCC--CC----CCCChHHHHHHHHHHHHHHHHHHH
Q 022900          166 FELIRHDVVE--------------------PLLLEVDQIYHLACPASP--VH----YKFNPVKTIKTNVVGTLNMLGLAK  219 (290)
Q Consensus       166 v~~~~~D~~~--------------------~~~~~vD~vih~Ag~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~a~~  219 (290)
                      .+-+..|+.+                    ..+.++|++|||||....  ..    ..+++++++++|+.|.+++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1222222211                    123569999999985321  11    123467789999999999999876


Q ss_pred             Hc---CCeEEEEcCCccc-cCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeee
Q 022900          220 RV---GARFLLTSTSEVY-GDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFIL  283 (290)
Q Consensus       220 ~~---~~riV~vSS~~vy-g~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~l  283 (290)
                      +.   +.+||++||.... +.+.          ...+|+.+|.+.+.+.+.++.++    |+.+..+-|+.+
T Consensus       165 p~m~~~G~ii~iss~~~~~~~p~----------~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v  226 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRAVPG----------YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPL  226 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCcCCC----------ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCc
Confidence            53   2378998875432 2110          01269999999988888888753    677777777754

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.32  E-value=5.6e-12  Score=107.88  Aligned_cols=153  Identities=20%  Similarity=0.212  Sum_probs=117.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cc--cCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL--LEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~--~~vD~vih  186 (290)
                      +++|+|||++|.+|++|.+.+.++|.  +-.++.              +..     ++|+++.     .+  +++.+|||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------~sk-----d~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------GSK-----DADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------ccc-----cccccchHHHHHHHhccCCceeee
Confidence            46899999999999999999999875  211111              112     2344433     22  46899999


Q ss_pred             cccCCCCCCC-CCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC--CCCCh----hhhhHH
Q 022900          187 LACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW--GNVNP----IGTYFF  258 (290)
Q Consensus       187 ~Ag~~~~~~~-~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~--~~~~p----y~~~k~  258 (290)
                      .|+..+.-.. ...+.+.+..|+.-.-|++..|-+.|+ ++|+..|+++|.+....|++|+..  +|+.|    |+..|.
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9997654443 345678899999999999999999996 899999999999999999999864  45544    555554


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ...-..+.|.+++|-+++..-|.|+-+.+
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGph  170 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPH  170 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCC
Confidence            44445589999999999999999998765

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.27  E-value=3.8e-11  Score=108.28  Aligned_cols=123  Identities=19%  Similarity=0.227  Sum_probs=85.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----c------cC-CCEEE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L------LE-VDQIY  185 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~------~~-vD~vi  185 (290)
                      +|+||||||+||++++++|+++|++|++++|+.....        ...++.+.+|+.|+.     +      .+ +|.|+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence            4899999999999999999999999999999754321        123445566776542     3      46 99999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~  264 (290)
                      |+++...      +.       ...+.+++++|++.|+ |||++||..++...           +      .+..    +
T Consensus        73 ~~~~~~~------~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-----------~------~~~~----~  118 (285)
T TIGR03649        73 LVAPPIP------DL-------APPMIKFIDFARSKGVRRFVLLSASIIEKGG-----------P------AMGQ----V  118 (285)
T ss_pred             EeCCCCC------Ch-------hHHHHHHHHHHHHcCCCEEEEeeccccCCCC-----------c------hHHH----H
Confidence            9986321      11       2345688999999996 99999986553210           0      0111    2


Q ss_pred             HHHHHH-hCCCeeEEEeee
Q 022900          265 LVFISQ-FRPSRKACRFFI  282 (290)
Q Consensus       265 ~~~~~~-~gl~~~ilR~~~  282 (290)
                      +.+.++ .|++++++|++.
T Consensus       119 ~~~l~~~~gi~~tilRp~~  137 (285)
T TIGR03649       119 HAHLDSLGGVEYTVLRPTW  137 (285)
T ss_pred             HHHHHhccCCCEEEEeccH
Confidence            234444 499999999974

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.26  E-value=1.1e-10  Score=100.16  Aligned_cols=149  Identities=15%  Similarity=0.101  Sum_probs=99.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeC-CCCCchhhh-hcccCCCCeEEEEccccccc--------------c
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN-FFTGRKENV-MHHFGNPNFELIRHDVVEPL--------------L  178 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r-~~~~~~~~~-~~~~~~~~v~~~~~D~~~~~--------------~  178 (290)
                      .+.|+||||+++||..|+++|++. |-++++..+ +.+...+++ .....++++++++.|++..+              .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            357999999999999999999986 666665544 343322222 22235789999999997653              2


Q ss_pred             cCCCEEEEcccCCCCCCCCC-----ChHHHHHHHHHHHHHHHHHHH----HcC------------CeEEEEcCCccccCC
Q 022900          179 LEVDQIYHLACPASPVHYKF-----NPVKTIKTNVVGTLNMLGLAK----RVG------------ARFLLTSTSEVYGDP  237 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~a~~----~~~------------~riV~vSS~~vyg~~  237 (290)
                      .++|++|||||+..+-....     .+.+.+++|..|+..+.+++.    +..            +.||++||.+--   
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s---  159 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS---  159 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc---
Confidence            36899999999764433322     245679999999999888752    111            269999997532   


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF  271 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~  271 (290)
                          ..-....+...|..+|.+.....+.+.-+.
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL  189 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDL  189 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhh
Confidence                111111234568888887766666655443

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.26  E-value=8.2e-12  Score=109.87  Aligned_cols=152  Identities=14%  Similarity=0.058  Sum_probs=109.8

Q ss_pred             cCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------c-cCCCEEEEc
Q 022900          123 GGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L-LEVDQIYHL  187 (290)
Q Consensus       123 Gas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~-~~vD~vih~  187 (290)
                      |++  ++||.++++.|+++|++|++++|+.+.....+.++......+++.+|++++.            + +++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  9999999999999999999999876543333444433223446999997762            4 679999999


Q ss_pred             ccCCCC----CCC----CCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhh
Q 022900          188 ACPASP----VHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY  256 (290)
Q Consensus       188 Ag~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~  256 (290)
                      +|....    ...    .+++..++++|+.+...+++++.+.   +.+||++||.+.....          .....|+..
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~----------~~~~~y~~s  150 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM----------PGYSAYSAS  150 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS----------TTTHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC----------ccchhhHHH
Confidence            997654    111    1245678999999999999988553   2489999987543211          112379999


Q ss_pred             HHHHHHHHHHHHHH----hCCCeeEEEeeeee
Q 022900          257 FFSFSLIFLVFISQ----FRPSRKACRFFILL  284 (290)
Q Consensus       257 k~~~e~~~~~~~~~----~gl~~~ilR~~~lr  284 (290)
                      |.+.+.+++.++.+    +|+++..+.|+.++
T Consensus       151 Kaal~~l~r~lA~el~~~~gIrVN~V~pG~i~  182 (241)
T PF13561_consen  151 KAALEGLTRSLAKELAPKKGIRVNAVSPGPIE  182 (241)
T ss_dssp             HHHHHHHHHHHHHHHGGHGTEEEEEEEESSBS
T ss_pred             HHHHHHHHHHHHHHhccccCeeeeeeccccee
Confidence            99988888888764    46777788777664

...

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.22  E-value=5.6e-11  Score=104.76  Aligned_cols=139  Identities=12%  Similarity=-0.018  Sum_probs=99.7

Q ss_pred             HHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc---------ccCCCEEEEcccCCCCCCCCCChHH
Q 022900          132 LVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL---------LLEVDQIYHLACPASPVHYKFNPVK  202 (290)
Q Consensus       132 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---------~~~vD~vih~Ag~~~~~~~~~~~~~  202 (290)
                      ++++|+++|++|++++|+.....          ..+++.+|+++..         ..++|+||||||...    ..+++.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~~   66 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVEL   66 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHHH
Confidence            47889999999999998643211          1245677887653         136999999999642    346788


Q ss_pred             HHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCC-----------------CCCCCCChhhhhHHHHHH
Q 022900          203 TIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKE-----------------TYWGNVNPIGTYFFSFSL  262 (290)
Q Consensus       203 ~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E-----------------~~~~~~~py~~~k~~~e~  262 (290)
                      ++++|+.++.++++++.+.   +.+||++||.+.|+.....+..|                 .......+|+.+|...+.
T Consensus        67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence            9999999999999998753   24999999998886432211111                 111234689999999888


Q ss_pred             HHHHHH-H---HhCCCeeEEEeeeee
Q 022900          263 IFLVFI-S---QFRPSRKACRFFILL  284 (290)
Q Consensus       263 ~~~~~~-~---~~gl~~~ilR~~~lr  284 (290)
                      +.+.++ .   .+|+.+..+.|+.++
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~  172 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVF  172 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCcc
Confidence            887777 3   458889999998764

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.21  E-value=2e-10  Score=128.00  Aligned_cols=156  Identities=17%  Similarity=0.070  Sum_probs=110.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCc----------------------------------------
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGR----------------------------------------  153 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~----------------------------------------  153 (290)
                      ++++++||||+|+||.+++++|+++ |++|++++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 69999999872100                                        


Q ss_pred             ---hhh----hhccc-CCCCeEEEEcccccccc-----------cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHH
Q 022900          154 ---KEN----VMHHF-GNPNFELIRHDVVEPLL-----------LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVG  210 (290)
Q Consensus       154 ---~~~----~~~~~-~~~~v~~~~~D~~~~~~-----------~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~g  210 (290)
                         ..+    +..+. ...++.++.+|++|...           .++|.||||||......    ..+++++++++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence               000    00010 13468889999988631           25999999999754333    223567789999999


Q ss_pred             HHHHHHHHHHcC-CeEEEEcCCc-cccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh-CCCeeEEEee
Q 022900          211 TLNMLGLAKRVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF-RPSRKACRFF  281 (290)
Q Consensus       211 t~~ll~a~~~~~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~-gl~~~ilR~~  281 (290)
                      +.++++++.... .+||++||.+ .||....           ..|+..|.....+...+..++ ++++..+-++
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gq-----------s~YaaAkaaL~~la~~la~~~~~irV~sI~wG 2218 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQ-----------SDYAMSNDILNKAALQLKALNPSAKVMSFNWG 2218 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCCc-----------HHHHHHHHHHHHHHHHHHHHcCCcEEEEEECC
Confidence            999999987765 4899999975 4553321           358888877666777776664 4444554444

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=2.5e-11  Score=100.11  Aligned_cols=149  Identities=17%  Similarity=0.115  Sum_probs=109.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc--------cCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--------LEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--------~~vD~vi  185 (290)
                      +.|+.|++||+.-+||+.++..|++.|++|+++.|+.......+.+.  ..-++.+.+|+.+.+.        ..+|.++
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--PSLIIPIVGDLSAWEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--CcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence            57889999999999999999999999999999987543333333221  2347888899976532        2489999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cCC--eEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~~--riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||||+.....+    +++.+..|++|+.+.+++.+...+    +.+  .||.+||++-.-.-          +.-..|..
T Consensus        83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~----------~nHtvYca  152 (245)
T KOG1207|consen   83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL----------DNHTVYCA  152 (245)
T ss_pred             ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc----------CCceEEee
Confidence            99998654443    355677899999999999888433    332  69999998643211          12246888


Q ss_pred             hHHHHHHHHHHHHHHhCCC
Q 022900          256 YFFSFSLIFLVFISQFRPS  274 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~gl~  274 (290)
                      +|.+...+...++-+.|-+
T Consensus       153 tKaALDmlTk~lAlELGp~  171 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQ  171 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcc
Confidence            8888888778887776643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.17  E-value=9.5e-10  Score=93.06  Aligned_cols=153  Identities=17%  Similarity=0.156  Sum_probs=96.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCC--Cch-hhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT--GRK-ENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~--~~~-~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++||||.|+||..+++.|+++|. +|+++.|...  ... +.+.++. ...++.++.+|++++.            ...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999976 7999998721  111 2222222 3568999999998773            236


Q ss_pred             CCEEEEcccCCCCCCCCC-C---hHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCc-cccCCCCCCCCCCCCCCCChhh
Q 022900          181 VDQIYHLACPASPVHYKF-N---PVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~-~---~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~-vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      +|.|||+||........+ +   ...++..-+.|+.++.+++..... .+|++||++ ++|....           ..|.
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq-----------~~Ya  150 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ-----------SAYA  150 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB-----------HHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch-----------HhHH
Confidence            899999999754333222 2   355788899999999999877665 788888875 5764422           2455


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeee
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFI  282 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~  282 (290)
                      ......+.+++... +.|.++..+....
T Consensus       151 aAN~~lda~a~~~~-~~g~~~~sI~wg~  177 (181)
T PF08659_consen  151 AANAFLDALARQRR-SRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHH-HTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHHH-hCCCCEEEEEccc
Confidence            55555566555444 4588877766543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.15  E-value=1.2e-11  Score=101.86  Aligned_cols=121  Identities=24%  Similarity=0.279  Sum_probs=91.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------------cccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------------~~~~  180 (290)
                      +.++...+||||.+++|.+.++.|+++|+.|+++|-....-.+..+++  ..++.+...|++.+            .+++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel--g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL--GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh--CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            357789999999999999999999999999999987554444444443  46789999999876            3567


Q ss_pred             CCEEEEcccCCCCCC----------CCCChHHHHHHHHHHHHHHHHHHHH---------cCC--eEEEEcCCcccc
Q 022900          181 VDQIYHLACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKR---------VGA--RFLLTSTSEVYG  235 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----------~~~~~~~~~~~Nv~gt~~ll~a~~~---------~~~--riV~vSS~~vyg  235 (290)
                      +|..+||||+.....          .-++..+++++|++||+|+++....         .|.  -||.+.|.+.|.
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            999999999753222          1123456799999999999887421         122  488888887764

>PRK06720 hypothetical protein; Provisional

Probab=99.15  E-value=5.2e-10  Score=93.78  Aligned_cols=120  Identities=15%  Similarity=0.029  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++++++||||+++||.++++.|+++|++|++++|+.+...+...++. ...++.++.+|+.+..            +++
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986433222112221 1345777889987542            356


Q ss_pred             CCEEEEcccCCCCCCCC-C-ChHHHHHHHHHHHHHHHHHH----HHcC--------CeEEEEcCCcc
Q 022900          181 VDQIYHLACPASPVHYK-F-NPVKTIKTNVVGTLNMLGLA----KRVG--------ARFLLTSTSEV  233 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~-~-~~~~~~~~Nv~gt~~ll~a~----~~~~--------~riV~vSS~~v  233 (290)
                      +|++|||||........ . ..+.....|+.++....+.+    .+.+        .||..+||.+.
T Consensus        94 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         94 IDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            99999999975432222 2 22222244555554444443    2222        27888888754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.14  E-value=1.1e-09  Score=102.43  Aligned_cols=163  Identities=19%  Similarity=0.094  Sum_probs=100.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------cc----CC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LL----EV  181 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~----~v  181 (290)
                      ...+.++|+|+||+|.+|+-+++.|+++|+.|.++.|+.............+.....+..|.+.+.      .+    ..
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence            446678999999999999999999999999999999865444333221112233333333333221      11    23


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHH
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSF  260 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~  260 (290)
                      .+++-|+|-.  +..+ +...-..+...|+.|+++||+.+|. |+|++|++..-   ...   ..+|.-..-.+.  ...
T Consensus       155 ~~v~~~~ggr--p~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~---~~~---~~~~~~~~~~~~--~~~  223 (411)
T KOG1203|consen  155 VIVIKGAGGR--PEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGT---KFN---QPPNILLLNGLV--LKA  223 (411)
T ss_pred             eeEEecccCC--CCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCc---ccC---CCchhhhhhhhh--hHH
Confidence            4556555521  1121 2222345788999999999999996 99999885432   111   111100000111  112


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      ....+.+.++.|++++|+|+.-+--
T Consensus       224 k~~~e~~~~~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  224 KLKAEKFLQDSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             HHhHHHHHHhcCCCcEEEecccccc
Confidence            4567777888899999999876543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.13  E-value=1.2e-10  Score=104.25  Aligned_cols=151  Identities=13%  Similarity=0.061  Sum_probs=104.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEcccccccc-----------cCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPLL-----------LEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~-----------~~vD  182 (290)
                      ++=.+|||||.+||++.+++|+++|.+|+++.|+.++......++..  .-++.++..|.++...           .++-
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            46799999999999999999999999999999976555444444432  2468888888877651           2477


Q ss_pred             EEEEcccCCC--CCCCCCC----hHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          183 QIYHLACPAS--PVHYKFN----PVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       183 ~vih~Ag~~~--~~~~~~~----~~~~~~~Nv~gt~~ll~a~~~----~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|||+|+..  |..+-+.    ..+.+.+|+.++..+.+....    .++ -||++||.+---     |.     ....
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~-----p~-----p~~s  198 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI-----PT-----PLLS  198 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc-----cC-----hhHH
Confidence            9999999764  3332222    245688999998888887543    333 799999964211     00     1124


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCee
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRK  276 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~  276 (290)
                      -|+.+|...+.+.+.+.++|....+
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI  223 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGI  223 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCe
Confidence            5777777667777777766644443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.12  E-value=1.2e-09  Score=95.58  Aligned_cols=139  Identities=19%  Similarity=0.232  Sum_probs=88.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcccCCCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPASP  193 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~Ag~~~~  193 (290)
                      |+|+||+|.+|+++++.|++.+++|.++.|+..  .+.... +....++++.+|..++     .+.++|.||++-+... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~-l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQ-LQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHH-HHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhh-hhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence            799999999999999999999999999999652  111211 1224567889998765     4678999998877432 


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR  272 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g  272 (290)
                                 ..-+....+++++|++.|+ +||+.|-...+...     ...  .+..+.-..|    ..++.+.++.+
T Consensus        77 -----------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~-----~~~--~p~~~~~~~k----~~ie~~l~~~~  134 (233)
T PF05368_consen   77 -----------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDES-----SGS--EPEIPHFDQK----AEIEEYLRESG  134 (233)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTT-----TTS--TTHHHHHHHH----HHHHHHHHHCT
T ss_pred             -----------hhhhhhhhhHHHhhhccccceEEEEEeccccccc-----ccc--cccchhhhhh----hhhhhhhhhcc
Confidence                       1234456789999999996 67654432233100     000  0112222223    33456666669


Q ss_pred             CCeeEEEeeee
Q 022900          273 PSRKACRFFIL  283 (290)
Q Consensus       273 l~~~ilR~~~l  283 (290)
                      ++++++|+++.
T Consensus       135 i~~t~i~~g~f  145 (233)
T PF05368_consen  135 IPYTIIRPGFF  145 (233)
T ss_dssp             SEBEEEEE-EE
T ss_pred             ccceeccccch
Confidence            99999998753

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.00  E-value=1.1e-09  Score=94.44  Aligned_cols=157  Identities=22%  Similarity=0.246  Sum_probs=114.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~  187 (290)
                      .+|+|||+-|.+|..+++.|..+ |. .|++.|...  ..+.+.     ...-++-.|+.|...       .++|.+||.
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~K--Pp~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVK--PPANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccC--Cchhhc-----ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence            48999999999999999999876 66 455544321  111111     122344556665532       359999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCC-CCCCCCC-CCCCChhhhhHHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ-HPQKETY-WGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~-~~~~E~~-~~~~~py~~~k~~~e~~~~  265 (290)
                      .+..+.. -+.|..-..++|+.|..|+++.+++.+-++..-|+++.||.... .|..+-. ..|..-||++|.-+|.+=+
T Consensus       118 SALLSAv-GE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE  196 (366)
T KOG2774|consen  118 SALLSAV-GETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE  196 (366)
T ss_pred             HHHHHHh-cccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence            8865433 34455556789999999999999999889999999999985432 3333322 3566779999999999999


Q ss_pred             HHHHHhCCCeeEEEee
Q 022900          266 VFISQFRPSRKACRFF  281 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~  281 (290)
                      .|..++|+++..+|+-
T Consensus       197 y~~hrFg~dfr~~rfP  212 (366)
T KOG2774|consen  197 YFNHRFGVDFRSMRFP  212 (366)
T ss_pred             HHHhhcCccceecccC
Confidence            9999999999998863

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.98  E-value=1.1e-08  Score=94.17  Aligned_cols=171  Identities=12%  Similarity=0.020  Sum_probs=115.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhccc-CCCCeEEEEc-cc--ccccccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHF-GNPNFELIRH-DV--VEPLLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~-D~--~~~~~~~vD~vih~  187 (290)
                      .++++|.|+|++|.||..++..|+.++  .+++++|+.  ..+....++. ......+... |-  ..+.+.++|+||++
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit   83 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLIC   83 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence            577899999999999999999999665  589999882  2222111211 1112233221 21  13678899999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC---CCCCCCCCCCCChhhhhHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ---HPQKETYWGNVNPIGTYFFSFSLI  263 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~---~~~~E~~~~~~~py~~~k~~~e~~  263 (290)
                      ||...  ....+..+.+..|+..+.++++++++.+. ++|+++|--+-.....   ....++.+.+...||.......++
T Consensus        84 aG~~~--~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~  161 (321)
T PTZ00325         84 AGVPR--KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRA  161 (321)
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHH
Confidence            99632  22356788999999999999999999996 8999999764322111   112334344556788766656666


Q ss_pred             HHHHHHHhCCCeeEEEeeeeecccC
Q 022900          264 FLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       264 ~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      ....++.++++..-++-.++.-|+.
T Consensus       162 r~~la~~l~v~~~~V~~~VlGeHGd  186 (321)
T PTZ00325        162 RKFVAEALGMNPYDVNVPVVGGHSG  186 (321)
T ss_pred             HHHHHHHhCcChhheEEEEEeecCC
Confidence            6666777888888777666665554

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.94  E-value=3.6e-09  Score=93.72  Aligned_cols=116  Identities=18%  Similarity=0.195  Sum_probs=89.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-----cCCCEEEEc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-----LEVDQIYHL  187 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-----~~vD~vih~  187 (290)
                      +.+|-.+-|.|||||+|..++.+|++.|-+|++--|-.+...-.++-.-.-.++-+...|+.|++.     ....+|||+
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            367778999999999999999999999999999887433222222111123578888899988864     457999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCc
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE  232 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~  232 (290)
                      -|-    .++...-+..++|+.+...+...|++.|+ |+|++|+..
T Consensus       138 IGr----d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg  179 (391)
T KOG2865|consen  138 IGR----DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG  179 (391)
T ss_pred             ecc----ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcc
Confidence            983    33333334557999999999999999997 999999864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.92  E-value=2.6e-08  Score=83.06  Aligned_cols=151  Identities=12%  Similarity=0.098  Sum_probs=102.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~Ag~~  191 (290)
                      |+|.|.||||.+|+.|++++.+|||+|+++.|+......       .+.+.+++.|+.+.     .+.+.|+||..-+..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-------RQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-------cccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            589999999999999999999999999999986533322       14566777787665     456899999876642


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCc-cccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~-vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      .+    .+...    .......+++..+..+. |++.++.++ .|-+.. .-+-++. .-+.+|-.........++.++.
T Consensus        74 ~~----~~~~~----~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p-~fP~ey~~~A~~~ae~L~~Lr~  143 (211)
T COG2910          74 AS----DNDEL----HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTP-DFPAEYKPEALAQAEFLDSLRA  143 (211)
T ss_pred             CC----ChhHH----HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCC-CCchhHHHHHHHHHHHHHHHhh
Confidence            21    11111    22225667777888785 999998875 343333 2222222 2335566666666666788888


Q ss_pred             HhCCCeeEEEeeeee
Q 022900          270 QFRPSRKACRFFILL  284 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr  284 (290)
                      ...++|+.+-|..+-
T Consensus       144 ~~~l~WTfvSPaa~f  158 (211)
T COG2910         144 EKSLDWTFVSPAAFF  158 (211)
T ss_pred             ccCcceEEeCcHHhc
Confidence            878999988776543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.87  E-value=5.3e-08  Score=86.57  Aligned_cols=139  Identities=17%  Similarity=0.114  Sum_probs=92.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~  191 (290)
                      ++|+||||||++|++++++|+++|++|.++.|+......    ..  ..+++...|+.+..     +.++|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~----~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA----LA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHh----hc--CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            479999999999999999999999999999885433322    21  67888999998774     46899999988743


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF  271 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~  271 (290)
                      .     .+. ...........+..+++.....+++.+|....-.            ....+|...+...|.    .....
T Consensus        75 ~-----~~~-~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~e~----~l~~s  132 (275)
T COG0702          75 D-----GSD-AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA------------ASPSALARAKAAVEA----ALRSS  132 (275)
T ss_pred             c-----ccc-chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC------------CCccHHHHHHHHHHH----HHHhc
Confidence            2     111 2233444555555555552223788887754321            122456666665444    44456


Q ss_pred             CCCeeEEEeeee
Q 022900          272 RPSRKACRFFIL  283 (290)
Q Consensus       272 gl~~~ilR~~~l  283 (290)
                      |++++++|....
T Consensus       133 g~~~t~lr~~~~  144 (275)
T COG0702         133 GIPYTTLRRAAF  144 (275)
T ss_pred             CCCeEEEecCee
Confidence            999999995443

>PLN00106 malate dehydrogenase

Probab=98.85  E-value=6.5e-08  Score=89.05  Aligned_cols=168  Identities=10%  Similarity=-0.026  Sum_probs=115.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC-CCCeEEEE---cccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG-NPNFELIR---HDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~---~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++|.|+|++|.||..++..|+.++.  +++++|++. ...+ ..++.. .....+..   .|-..+.+.++|+|||+||.
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~-a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGV-AADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCee-EchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            5899999999999999999997654  799998865 2211 112111 11222221   22224578899999999996


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCcccc---CCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG---DPLQHPQKETYWGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg---~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~  266 (290)
                      ...  ...+..+.+..|+..+.++.+.+++.+. .+|+++|--+=+   --.+.....+.+.+.+.||..+...+++...
T Consensus        97 ~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~  174 (323)
T PLN00106         97 PRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTF  174 (323)
T ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHH
Confidence            432  2456788999999999999999999986 788877732210   0000111223334556888888778888888


Q ss_pred             HHHHhCCCeeEEEeeeeecccC
Q 022900          267 FISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      ++++++++..-+.-.++-.++|
T Consensus       175 lA~~lgv~~~~V~~~ViGeHg~  196 (323)
T PLN00106        175 VAEKKGLDPADVDVPVVGGHAG  196 (323)
T ss_pred             HHHHhCCChhheEEEEEEeCCC
Confidence            8899999988888887777755

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.75  E-value=2.2e-08  Score=86.10  Aligned_cols=157  Identities=16%  Similarity=0.113  Sum_probs=99.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE--eCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~--~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++.++|||+|.+||..+++.+.+++.+.+..  .|.... .+.+.-... .......+|+++..            ..+
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            45789999999999999999999988765443  332222 222111112 33444455665543            235


Q ss_pred             CCEEEEcccCCCCCCC-------CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY-------KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~-------~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      -|.||||||...+...       .+.+.+.++.|+.+++.+...+.+    ..  +.+|++||.+..-     |+     
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-----p~-----  152 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-----PF-----  152 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----cc-----
Confidence            8999999997654442       234678999999999998887643    32  4699999976431     00     


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH-h-CCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ-F-RPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~-~-gl~~~ilR~~~l  283 (290)
                      .....|.-+|.+-+.+.+.++.+ + +..+..++|+.+
T Consensus       153 ~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv  190 (253)
T KOG1204|consen  153 SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV  190 (253)
T ss_pred             cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence            01135667777767777776654 2 666666676654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.66  E-value=8.4e-08  Score=81.01  Aligned_cols=95  Identities=12%  Similarity=0.061  Sum_probs=67.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~v  184 (290)
                      |+++||||+|++|. +++.|+++|++|++++|+.....+.........++.++.+|+.++.            ..++|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            47999999987765 9999999999999998854322222211212346888899998763            2357888


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-----eEEEEcC
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-----RFLLTST  230 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-----riV~vSS  230 (290)
                      |+..                  .+.++.++..+|++.+.     +++++=.
T Consensus        80 v~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g  112 (177)
T PRK08309         80 VAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLG  112 (177)
T ss_pred             EEec------------------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence            8653                  44567889999998884     4777543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.63  E-value=6.3e-08  Score=80.31  Aligned_cols=148  Identities=13%  Similarity=-0.011  Sum_probs=94.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEccc-----ccccccCCCEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-----VEPLLLEVDQIY  185 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~-----~~~~~~~vD~vi  185 (290)
                      .++++.++|.||||-.|..+++++++.+.  +|+++.|......+      .+..+.....|.     ......++|+.+
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a------t~k~v~q~~vDf~Kl~~~a~~~qg~dV~F   88 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA------TDKVVAQVEVDFSKLSQLATNEQGPDVLF   88 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc------ccceeeeEEechHHHHHHHhhhcCCceEE
Confidence            36788999999999999999999999986  89999875322221      123333333343     333567899999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~  264 (290)
                      ++-|.+....-   .+..+++.-.-.+.+.+++++.|+ +|+++||.+.-...            .--|-..|...|.-+
T Consensus        89 caLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sS------------rFlY~k~KGEvE~~v  153 (238)
T KOG4039|consen   89 CALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSS------------RFLYMKMKGEVERDV  153 (238)
T ss_pred             Eeecccccccc---cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccc------------ceeeeeccchhhhhh
Confidence            99987644332   223334555556678888999996 89999997542110            012444444444432


Q ss_pred             HHHHHHhCCCeeEEEeeeee
Q 022900          265 LVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~lr  284 (290)
                      ..+.   =-+++|+||+.+.
T Consensus       154 ~eL~---F~~~~i~RPG~ll  170 (238)
T KOG4039|consen  154 IELD---FKHIIILRPGPLL  170 (238)
T ss_pred             hhcc---ccEEEEecCccee
Confidence            2221   1247889988764

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.53  E-value=3.3e-07  Score=80.13  Aligned_cols=144  Identities=15%  Similarity=0.097  Sum_probs=95.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-----eEEEEeCCCCCchhhhhccc---C--CCCeEEEEccccccc--------
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-----SVIVVDNFFTGRKENVMHHF---G--NPNFELIRHDVVEPL--------  177 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-----~V~~~~r~~~~~~~~~~~~~---~--~~~v~~~~~D~~~~~--------  177 (290)
                      .|.++|||++++||.+|+.+|++..+     ++++.+|+.++.++.+..+.   .  .-+++++..|+++-.        
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            46899999999999999999998755     45667887666665554443   2  236888999997652        


Q ss_pred             ----ccCCCEEEEcccCCCCCC-------------------------------CCCChHHHHHHHHHHHHHHHHHHHH--
Q 022900          178 ----LLEVDQIYHLACPASPVH-------------------------------YKFNPVKTIKTNVVGTLNMLGLAKR--  220 (290)
Q Consensus       178 ----~~~vD~vih~Ag~~~~~~-------------------------------~~~~~~~~~~~Nv~gt~~ll~a~~~--  220 (290)
                          +.++|.|+-|||....+.                               ..++-..++++||.|...+++....  
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                346999999999743222                               1123345789999999988876432  


Q ss_pred             ---cCCeEEEEcCCccccCCCCCCCCCCC--CCCCChhhhhHHHHHH
Q 022900          221 ---VGARFLLTSTSEVYGDPLQHPQKETY--WGNVNPIGTYFFSFSL  262 (290)
Q Consensus       221 ---~~~riV~vSS~~vyg~~~~~~~~E~~--~~~~~py~~~k~~~e~  262 (290)
                         .+..+|++||...=.  ..-.+ |+.  ..-..||..+|.....
T Consensus       163 ~~~~~~~lvwtSS~~a~k--k~lsl-eD~q~~kg~~pY~sSKrl~Dl  206 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARK--KNLSL-EDFQHSKGKEPYSSSKRLTDL  206 (341)
T ss_pred             hcCCCCeEEEEeeccccc--ccCCH-HHHhhhcCCCCcchhHHHHHH
Confidence               234899999964311  11111 111  1123578888876544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.51  E-value=3.7e-06  Score=78.65  Aligned_cols=77  Identities=14%  Similarity=0.078  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCeEEEEeCCCCCch-----------hhhhccc--CCCCeEEEEccccccc-
Q 022900          114 RKGLRIVVTGGAGFVGSH--LVDRLIARGDSVIVVDNFFTGRK-----------ENVMHHF--GNPNFELIRHDVVEPL-  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~--la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~--~~~~v~~~~~D~~~~~-  177 (290)
                      ..+|+++|||+++++|.+  +++.| +.|++|+++++......           +......  ....+..+.+|++++. 
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            457899999999999999  89999 99999999875321111           1111111  1235677899998762 


Q ss_pred             -----------ccCCCEEEEcccCC
Q 022900          178 -----------LLEVDQIYHLACPA  191 (290)
Q Consensus       178 -----------~~~vD~vih~Ag~~  191 (290)
                                 ++++|+||||+|..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence                       45799999999964

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.49  E-value=1.7e-06  Score=79.88  Aligned_cols=109  Identities=16%  Similarity=0.089  Sum_probs=73.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-------CeEEEEeCCCCC--chhhhhcccC-----CCCeEEEEcccccccccCCCE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARG-------DSVIVVDNFFTG--RKENVMHHFG-----NPNFELIRHDVVEPLLLEVDQ  183 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G-------~~V~~~~r~~~~--~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~vD~  183 (290)
                      +|+||||+|+||.+++..|+.++       .+|+++|++...  .+....++..     ..++  ...+-..+.+.++|+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~--~~~~~~~~~l~~aDi   81 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSV--VATTDPEEAFKDVDV   81 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCc--eecCCHHHHhCCCCE
Confidence            79999999999999999999854       589999985321  1111111110     0111  111112356778999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS  230 (290)
                      |||+||....  ...+..+.++.|+.-...+.+.+++.. .  .++.+|.
T Consensus        82 VI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          82 AILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            9999996432  345568899999999999988888773 2  5666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.43  E-value=7.6e-07  Score=78.19  Aligned_cols=74  Identities=22%  Similarity=0.510  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCC----------------chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc--cccc-
Q 022900          115 KGLRIVVTGGA----------------GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH--DVVE-  175 (290)
Q Consensus       115 ~~k~VlVTGas----------------G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~--D~~~-  175 (290)
                      ++|+|+||+|.                ||+|.+|+++|+++|++|+++++..........   ....+..+..  |+.+ 
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~~   78 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQDK   78 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHHH
Confidence            57899999886                999999999999999999999865322221111   1122333444  4332 


Q ss_pred             --ccc--cCCCEEEEcccCC
Q 022900          176 --PLL--LEVDQIYHLACPA  191 (290)
Q Consensus       176 --~~~--~~vD~vih~Ag~~  191 (290)
                        +.+  .++|+|||+||+.
T Consensus        79 l~~~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         79 MKSIITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHhcccCCCEEEECcccc
Confidence              223  3589999999975

>PRK05086 malate dehydrogenase; Provisional

Probab=98.34  E-value=1.1e-05  Score=74.26  Aligned_cols=168  Identities=13%  Similarity=0.046  Sum_probs=99.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH---CCCeEEEEeCCCCCchhhhhcccCCC-CeEEEE--cccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKENVMHHFGNP-NFELIR--HDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~-~v~~~~--~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|+|.||+|.||.+++..|..   .++.+++++++.. ......++.... ...+..  .+-..+.+.++|+||.++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence            5899999999999999998855   2457888887632 211111221112 122221  22223566789999999996


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCcc----ccCCCCCCCCCCCCCCCChhhhhHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV----YGDPLQHPQKETYWGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~v----yg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~  265 (290)
                      ..  ....+..+.+..|...+.++++++++.+. ++|.+.|==+    |=.. ......+-..+...++.......++..
T Consensus        80 ~~--~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~-~~~~~~sg~p~~rvig~~~Lds~R~~~  156 (312)
T PRK05086         80 AR--KPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAA-EVLKKAGVYDKNKLFGVTTLDVIRSET  156 (312)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHH-HHHHHhcCCCHHHEEeeecHHHHHHHH
Confidence            32  22346778899999999999999999885 6777766311    1000 000011101111234443333344455


Q ss_pred             HHHHHhCCCeeEEEeeeeecccC
Q 022900          266 VFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      .+++.++++..-+...++.-+.|
T Consensus       157 ~ia~~l~~~~~~v~~~v~GeHg~  179 (312)
T PRK05086        157 FVAELKGKQPGEVEVPVIGGHSG  179 (312)
T ss_pred             HHHHHhCCChhheEEEEEEecCC
Confidence            55666788877777666666644

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.32  E-value=9.9e-06  Score=74.74  Aligned_cols=160  Identities=11%  Similarity=-0.016  Sum_probs=108.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCC--chhhhhcccC-----CCCeEEEEcccccccccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKENVMHHFG-----NPNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~vD  182 (290)
                      ++|.|+|++|.||..++..|+.+|.       +++++|+....  ......++..     ..++.+..  -..+.+.+.|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~~daD   80 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD--DPNVAFKDAD   80 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec--CcHHHhCCCC
Confidence            4899999999999999999998875       68888874322  2222222211     01233332  1246788999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcCCc---cccCCCCCCCCCC-CCCCCChhhh
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTSTSE---VYGDPLQHPQKET-YWGNVNPIGT  255 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS~~---vyg~~~~~~~~E~-~~~~~~py~~  255 (290)
                      +||-+||..  .....+-.+.++.|+.-...+.+.+++.+ .  .++.+|.-.   .|-.     .... -..+.+.|+.
T Consensus        81 ivvitaG~~--~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-----~k~sg~~p~~~ViG~  153 (322)
T cd01338          81 WALLVGAKP--RGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-----MKNAPDIPPDNFTAM  153 (322)
T ss_pred             EEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-----HHHcCCCChHheEEe
Confidence            999999963  32345677889999999999999998876 3  566665311   1100     1111 1223457899


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          256 YFFSFSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      ++...+++...+++.++++...+|.+++.+
T Consensus       154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~G  183 (322)
T cd01338         154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWG  183 (322)
T ss_pred             hHHHHHHHHHHHHHHhCcChhHeEEEEEEe
Confidence            888889999999999999999999877533

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.32  E-value=2.2e-06  Score=75.33  Aligned_cols=69  Identities=23%  Similarity=0.390  Sum_probs=47.0

Q ss_pred             EEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-------ccccCCCEEEEccc
Q 022900          118 RIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-------PLLLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-------~~~~~vD~vih~Ag  189 (290)
                      .-+||+ +|||+|.+|+++|+++|++|++++|.......      ...+++++..+..+       ..+.++|+||||||
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AA   90 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMA   90 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCc
Confidence            455665 68899999999999999999999875321110      11345555543322       23457999999999


Q ss_pred             CCC
Q 022900          190 PAS  192 (290)
Q Consensus       190 ~~~  192 (290)
                      +..
T Consensus        91 vsd   93 (229)
T PRK06732         91 VSD   93 (229)
T ss_pred             cCC
Confidence            754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=5.8e-06  Score=77.56  Aligned_cols=93  Identities=24%  Similarity=0.312  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~Ag  189 (290)
                      +++|+|.|+ |+||+.++..|+++| .+|++.+|+..........  ...+++....|+.+.     .+.+.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            478999997 999999999999999 7999999854333222221  234788888888776     3456899999986


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vS  229 (290)
                      +.              .    ..+++++|.+.|++++=+|
T Consensus        78 ~~--------------~----~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          78 PF--------------V----DLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             ch--------------h----hHHHHHHHHHhCCCEEEcc
Confidence            42              1    2367888888887766655

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.14  E-value=3.8e-05  Score=62.41  Aligned_cols=111  Identities=13%  Similarity=0.096  Sum_probs=76.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ++|.|+|++|.+|.+++..|..++.  ++.++|++....+....++.   ...........-..+.+.+.|+||-+||..
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            4899999999999999999999864  89999976332222222221   111122222224456778999999999963


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                        .....+..+.++.|..-...+.+.+.+.+.  .++.+|
T Consensus        81 --~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   81 --RKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             --SSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             --ccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence              333456778899999999999999988774  444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd00704 MDH Malate dehydrogenase

Probab=98.09  E-value=5.4e-05  Score=69.90  Aligned_cols=108  Identities=14%  Similarity=0.096  Sum_probs=73.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCC--CCchhhhhcccCC-----CCeEEEEcccccccccCCCE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFF--TGRKENVMHHFGN-----PNFELIRHDVVEPLLLEVDQ  183 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~-----~~v~~~~~D~~~~~~~~vD~  183 (290)
                      +|.|+||+|.||..++..|+.+|.       +++++|++.  +..+....++...     ..+.+ . +-..+.+.++|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i-~-~~~~~~~~~aDi   79 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVI-T-TDPEEAFKDVDV   79 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEE-e-cChHHHhCCCCE
Confidence            799999999999999999998653       488888764  2221111111110     11222 2 223567788999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEc
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTS  229 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vS  229 (290)
                      |||+||..  .....+-.+.++.|+.-...+.+.+++.. .  .++.+|
T Consensus        80 VVitAG~~--~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          80 AILVGAFP--RKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             EEEeCCCC--CCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999963  33345677889999999999999998873 4  555554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.06  E-value=1.1e-05  Score=76.52  Aligned_cols=68  Identities=26%  Similarity=0.310  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc--
Q 022900          114 RKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE--  175 (290)
Q Consensus       114 ~~~k~VlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~--  175 (290)
                      +++|+|+||||                ||.+|.+++++|+++|++|+++++.....      .  ...+.  ..|+.+  
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~------~--~~~~~--~~dv~~~~  255 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP------T--PAGVK--RIDVESAQ  255 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc------C--CCCcE--EEccCCHH
Confidence            67899999999                88899999999999999999998753211      0  11122  234433  


Q ss_pred             -------ccccCCCEEEEcccCC
Q 022900          176 -------PLLLEVDQIYHLACPA  191 (290)
Q Consensus       176 -------~~~~~vD~vih~Ag~~  191 (290)
                             ..++++|++|||||+.
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEccccc
Confidence                   2345799999999975

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.02  E-value=1.1e-05  Score=68.75  Aligned_cols=76  Identities=18%  Similarity=0.194  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-----ccccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-----~~~~~vD~vih~A  188 (290)
                      .++++++|+||+|++|+.+++.|+++|++|++++|+.++..+....+.......+...|..+     +.+.++|+||++.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            56789999999999999999999999999999988643332222222111123333344433     3456799999876


Q ss_pred             c
Q 022900          189 C  189 (290)
Q Consensus       189 g  189 (290)
                      .
T Consensus       106 ~  106 (194)
T cd01078         106 A  106 (194)
T ss_pred             C
Confidence            5

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.98  E-value=1.7e-05  Score=69.68  Aligned_cols=93  Identities=14%  Similarity=0.214  Sum_probs=54.2

Q ss_pred             EEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-------ccccCCCEEEEccc
Q 022900          118 RIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-------PLLLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-------~~~~~vD~vih~Ag  189 (290)
                      .=+||. ++|+||.++++.|+++|++|+++++...     .... ....+++.+.+-.+       +.++++|++|||||
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-----l~~~-~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-----LKPE-PHPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-----cccc-cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            445665 5889999999999999999999875211     1000 01123333322221       12457999999999


Q ss_pred             CCCCCC-CCCChHHHHHHHHHHHHHHHH
Q 022900          190 PASPVH-YKFNPVKTIKTNVVGTLNMLG  216 (290)
Q Consensus       190 ~~~~~~-~~~~~~~~~~~Nv~gt~~ll~  216 (290)
                      +..... ...+.++..+++..+++.+.+
T Consensus        90 v~d~~~~~~~s~e~~~~~~~~~~~~~~~  117 (227)
T TIGR02114        90 VSDYTPVYMTDLEQVQASDNLNEFLSKQ  117 (227)
T ss_pred             eccccchhhCCHHHHhhhcchhhhhccc
Confidence            753222 223344445555555555543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.91  E-value=7.1e-05  Score=64.86  Aligned_cols=148  Identities=16%  Similarity=0.077  Sum_probs=102.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEcccccccccCCCEEEEcccCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~  193 (290)
                      ...++.|+.||.|.++++.....|+.|..+.|+..  +..+...   ....+...+..|..+..+.++..++-+++..  
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf--  128 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF--  128 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCc--
Confidence            36889999999999999999999999999987632  2222111   1112344445555666777888888887742  


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR  272 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g  272 (290)
                          .+...+..+|-....+..+++++.|+ +|+++|-. -||.....         ...|-..|..+|.   .+...++
T Consensus       129 ----gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~-d~~~~~~i---------~rGY~~gKR~AE~---Ell~~~~  191 (283)
T KOG4288|consen  129 ----GNIILMDRINGTANINAVKAAAKAGVPRFVYISAH-DFGLPPLI---------PRGYIEGKREAEA---ELLKKFR  191 (283)
T ss_pred             ----cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh-hcCCCCcc---------chhhhccchHHHH---HHHHhcC
Confidence                24456667888888888999999996 99999863 23322111         1246666666655   4455678


Q ss_pred             CCeeEEEeeeeec
Q 022900          273 PSRKACRFFILLY  285 (290)
Q Consensus       273 l~~~ilR~~~lr~  285 (290)
                      ...+++||+.+..
T Consensus       192 ~rgiilRPGFiyg  204 (283)
T KOG4288|consen  192 FRGIILRPGFIYG  204 (283)
T ss_pred             CCceeeccceeec
Confidence            8999999987654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.90  E-value=3.1e-05  Score=73.09  Aligned_cols=90  Identities=26%  Similarity=0.252  Sum_probs=60.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPA  191 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~  191 (290)
                      |+|.|| |++|+.+++.|++++.  +|++.+|+..+........ ...++.....|+.+..     +.+.|+||||+++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 9999999999999874  7999998643333332222 4578999999998764     46799999999852


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEE
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT  228 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~v  228 (290)
                                        ....++++|.+.|+++|-+
T Consensus        79 ------------------~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   79 ------------------FGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             ------------------GHHHHHHHHHHHT-EEEES
T ss_pred             ------------------hhHHHHHHHHHhCCCeecc
Confidence                              1235677777777766663

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.88  E-value=0.00015  Score=66.97  Aligned_cols=111  Identities=15%  Similarity=0.084  Sum_probs=72.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCC--chhhhhcccCCC---CeEEEEcccccccccCCCEEE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKENVMHHFGNP---NFELIRHDVVEPLLLEVDQIY  185 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~---~v~~~~~D~~~~~~~~vD~vi  185 (290)
                      +|.|+|++|.||..++..|..+|.       +++++|++...  ......++....   .-.++..+-..+.+.++|+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            589999999999999999998554       48888875332  111111111100   001111111245778899999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS  230 (290)
                      |+||....  ...+..+.++.|+.-...+.+.+++.. .  .++.+|.
T Consensus        81 itAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        81 LVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             EcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            99996422  234578889999999999999998873 4  5555553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.87  E-value=1.6e-05  Score=73.68  Aligned_cols=73  Identities=22%  Similarity=0.287  Sum_probs=49.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC-C-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-G-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..++++|+||||+|+||+.++++|+++ | .+++++.|+..+..+...+. ...+  +.  | .++.+.++|+|||+++.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el-~~~~--i~--~-l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL-GGGK--IL--S-LEEALPEADIVVWVASM  225 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh-cccc--HH--h-HHHHHccCCEEEECCcC
Confidence            467899999999999999999999865 5 58888887533322222111 1111  11  2 23556789999999985


Q ss_pred             C
Q 022900          191 A  191 (290)
Q Consensus       191 ~  191 (290)
                      .
T Consensus       226 ~  226 (340)
T PRK14982        226 P  226 (340)
T ss_pred             C
Confidence            3

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.87  E-value=0.00035  Score=64.35  Aligned_cols=110  Identities=17%  Similarity=0.179  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC----CCeEEEEcccccccccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN----PNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      .+++|.|+|+ |.+|..++..|+.+|.  ++.++|++....+....++...    .++.+...|  .+.+.++|+||-.|
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~--~~~~~~adivIita   81 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGD--YSDCKDADLVVITA   81 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCC--HHHhCCCCEEEEec
Confidence            4569999997 9999999999999887  7999998655444333333211    234444333  34578999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      |..  .....+-.+.++.|..-...+++.+++.+.  .++.+|
T Consensus        82 g~~--~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         82 GAP--QKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            963  223456678899999999999998888764  555555

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.86  E-value=0.00036  Score=64.08  Aligned_cols=111  Identities=13%  Similarity=0.084  Sum_probs=75.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCC--CCchhhhhccc-----CCCCeEEEE-cccccccccCCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFF--TGRKENVMHHF-----GNPNFELIR-HDVVEPLLLEVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~--~~~~~~~~~~~-----~~~~v~~~~-~D~~~~~~~~vD~vih  186 (290)
                      |+|.|+|++|.+|..++..|+..|.  +|+++++..  +........+.     ......+.- .|  .+.+.+.|+||-
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d--~~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD--LSDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC--HHHhCCCCEEEE
Confidence            5899999999999999999999987  499999843  22211111111     111222222 24  245889999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCC
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTS  231 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~  231 (290)
                      ++|..  .....+..+.++.|+.-...+.+.+.+.+.  .+|.+++.
T Consensus        79 tag~p--~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          79 TAGVP--RKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             ecCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            99953  222334467888999999999998877653  67777763

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.83  E-value=4.3e-05  Score=61.53  Aligned_cols=76  Identities=26%  Similarity=0.322  Sum_probs=58.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..++++++|.| +|+.|+.++..|.+.|.+ |+++.|+.++..+... .+....+.++..+-......++|+||++.+.
T Consensus         9 ~l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~-~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen    9 DLKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAE-EFGGVNIEAIPLEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             TGTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHH-HHTGCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred             CcCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HcCccccceeeHHHHHHHHhhCCeEEEecCC
Confidence            36789999999 599999999999999986 9999886443333322 3355578888887777778899999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.81  E-value=0.00045  Score=63.43  Aligned_cols=110  Identities=13%  Similarity=0.032  Sum_probs=76.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC-CCeEEEE--c-ccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN-PNFELIR--H-DVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~v~~~~--~-D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++|.|+|++|.+|.+++-.|+.+|.  +++++|.+  ...-...++... ....+..  . |-..+.+.+.|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence            4799999999999999999998874  78999886  222222222111 1222222  2 2224678899999999996


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      .  .....+-.+.++.|..-...+.+..++.+.  .++.+|-
T Consensus        79 ~--~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          79 P--RKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            3  333456788899999999999999988774  5666654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.80  E-value=0.00027  Score=64.75  Aligned_cols=109  Identities=18%  Similarity=0.194  Sum_probs=76.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|.| +|.+|..++..|+.+|  ++|++++++.........++.     ......+...|  .+.+.++|+||+++|
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~--~~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGD--YSDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCC--HHHhCCCCEEEEccC
Confidence            3789999 5999999999999998  589999987554433333221     11223333333  235778999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ..  .....+-.+.++.|..-...+.+.+++.+.  .++.+|-
T Consensus        78 ~~--~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          78 AP--QKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            63  233456678899999999999999888764  5666653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.78  E-value=5.6e-05  Score=72.70  Aligned_cols=75  Identities=27%  Similarity=0.288  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++|+|+|+|+++ +|..+++.|+++|++|+++++..... .+...++ ....+.++..|..+....++|+||+++|.
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~d~vv~~~g~   78 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL-GELGIELVLGEYPEEFLEGVDLVVVSPGV   78 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH-HhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence            4678999999777 99999999999999999998853221 1112222 22356788888888777789999999985

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.77  E-value=0.00076  Score=58.59  Aligned_cols=150  Identities=13%  Similarity=0.088  Sum_probs=94.9

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCC-CCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~------------~  178 (290)
                      ++||+++|+|-  ...|+..|++.|.++|+++....... +.+..+.++... ....++++|++++.            +
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            68999999994  56999999999999999987765432 333333333222 23567899997763            3


Q ss_pred             cCCCEEEEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|.+||+-|......        ..+++...+++-......+.++++..   |..+|-++=   +|.       |...
T Consensus        83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY---lgs-------~r~v  152 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY---LGS-------ERVV  152 (259)
T ss_pred             CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe---ccc-------eeec
Confidence            57999999999742111        11223345566666666666666543   234444431   121       1111


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHhCCC
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQFRPS  274 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~gl~  274 (290)
                      -.-|..++.|.+.|.-+++++...|-+
T Consensus       153 PnYNvMGvAKAaLEasvRyLA~dlG~~  179 (259)
T COG0623         153 PNYNVMGVAKAALEASVRYLAADLGKE  179 (259)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhCcc
Confidence            122567888888899889888877644

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.74  E-value=1.3e-05  Score=75.67  Aligned_cols=103  Identities=17%  Similarity=0.253  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccc-c-
Q 022900          114 RKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-E-  175 (290)
Q Consensus       114 ~~~k~VlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~-~-  175 (290)
                      +++++|+||||                ||.+|.+++++|..+|++|+++.+.......   .  ....+++...+-. + 
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~---~--~~~~~~v~~~~~~~~~  257 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTP---P--GVKSIKVSTAEEMLEA  257 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCC---C--CcEEEEeccHHHHHHH
Confidence            67899999999                3469999999999999999998764321100   0  0011222221111 1 


Q ss_pred             ---ccccCCCEEEEcccCCCCCCCCC------ChHHHHHHHHHHHHHHHHHHHHc
Q 022900          176 ---PLLLEVDQIYHLACPASPVHYKF------NPVKTIKTNVVGTLNMLGLAKRV  221 (290)
Q Consensus       176 ---~~~~~vD~vih~Ag~~~~~~~~~------~~~~~~~~Nv~gt~~ll~a~~~~  221 (290)
                         ....++|++|||||+........      .....+..|+..+-.+++..++.
T Consensus       258 ~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       258 ALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             HHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence               12346899999999863322111      01123345666667777766654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.59  E-value=0.0012  Score=60.70  Aligned_cols=109  Identities=13%  Similarity=0.013  Sum_probs=74.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC-CCCeEEEE--cc-cccccccCCCEEEEcccCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG-NPNFELIR--HD-VVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~--~D-~~~~~~~~vD~vih~Ag~~  191 (290)
                      +|.|+|++|.||.+++..|+.++.  +++++|++. .. -...++.. .....+..  .| -..+.+.+.|+||-+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~-g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AA-GVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-Cc-EEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence            489999999999999999998875  788888754 22 11111211 11223332  12 2246788999999999963


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                        .....+-.+.++.|+.-...+.+.+++.+.  .++.+|-
T Consensus        79 --~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 --RKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             --CCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence              333456677899999999999998888764  5555554

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.57  E-value=0.0011  Score=63.62  Aligned_cols=110  Identities=8%  Similarity=0.066  Sum_probs=79.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-------CC--eEEEEeCCCCCchhhhhcccCC-----CCeEEEEcccccccccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-------GD--SVIVVDNFFTGRKENVMHHFGN-----PNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~-----~~v~~~~~D~~~~~~~~vD  182 (290)
                      -+|.|+|++|.||.+++-.|+.+       |.  ++++++++.+.......++...     .++.+...  ..+.+.+.|
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~--~ye~~kdaD  178 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID--PYEVFQDAE  178 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC--CHHHhCcCC
Confidence            48999999999999999999988       54  7888888765554444433211     12322222  246788999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH-cCC--eEEEEcC
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR-VGA--RFLLTST  230 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~-~~~--riV~vSS  230 (290)
                      +||-.||..  .....+-.+.++.|+.-...+.+..++ .+.  .+|.+|-
T Consensus       179 iVVitAG~p--rkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        179 WALLIGAKP--RGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             EEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            999999963  333456778899999999999999988 554  6666664

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.55  E-value=0.00043  Score=64.36  Aligned_cols=106  Identities=21%  Similarity=0.271  Sum_probs=69.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc-------------------h-----hhhhcccCCCCe
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-------------------K-----ENVMHHFGNPNF  166 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~-----~~~~~~~~~~~v  166 (290)
                      ..+++++|+|.| .|++|.++++.|++.|. +++++|+..-..                   +     +.+.++...-++
T Consensus        20 ~~L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            346778999999 68899999999999998 788888753100                   0     111122233456


Q ss_pred             EEEEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          167 ELIRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       167 ~~~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +.+..|++.+    .+.++|+||.+..         +.        ..-..+-++|.+.++.+|+.+..+.||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~DlVid~~D---------~~--------~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475         99 VPVVTDVTVEELEELVKEVDLIIDATD---------NF--------DTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             EEEeccCCHHHHHHHhcCCCEEEEcCC---------CH--------HHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            6666666533    3567999998753         12        112234567888888888888776655

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.54  E-value=0.0002  Score=65.18  Aligned_cols=76  Identities=12%  Similarity=0.099  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCC---CCchhhhhcccC-CCCeEEEEcccccc-----cccCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFF---TGRKENVMHHFG-NPNFELIRHDVVEP-----LLLEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~---~~~~~~~~~~~~-~~~v~~~~~D~~~~-----~~~~vD~  183 (290)
                      .++++++|+|| |++|++++..|++.|++ |++++|+.   ++..+....+.. ...+.+...|+.+.     .+.++|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            46789999998 89999999999999985 99999864   222222222211 12344445555432     3356899


Q ss_pred             EEEcccC
Q 022900          184 IYHLACP  190 (290)
Q Consensus       184 vih~Ag~  190 (290)
                      ||||--+
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9998754

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.52  E-value=0.0013  Score=60.25  Aligned_cols=109  Identities=16%  Similarity=0.152  Sum_probs=75.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC-----CCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG-----NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|+|+ |+||+.++..|+.++.  ++.++|+.....+-...++..     .....+ ..|-..+.+.+.|+|+-.||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i-~~~~~y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKI-TGDGDYEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEE-ecCCChhhhcCCCEEEEeCC
Confidence            47999998 9999999999988753  789999873333322222221     112222 22222567788999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      .  +.....+-.+.++.|..-+..+.+..++.+.  .|+.++
T Consensus        79 ~--prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          79 V--PRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             C--CCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            5  3444466778899999999999999888775  444444

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.48  E-value=0.0011  Score=62.71  Aligned_cols=100  Identities=15%  Similarity=0.162  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhccc---CCCCe-EEEEcccccccccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHF---GNPNF-ELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~---~~~~v-~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      .++++|.|.||||++|.+|++.|.++ +.+|..+.+..... +.+....   ..... ++.  |+....+.++|+||-+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~~~~~l~~~~~~~~~--~~~~~~~~~~DvVf~Al  112 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGSVFPHLITQDLPNLV--AVKDADFSDVDAVFCCL  112 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchhhCccccCcccccee--cCCHHHhcCCCEEEEcC
Confidence            45679999999999999999999998 66888887642221 1111110   00111 111  22223356899999876


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +.                  .....++..+ +.++++|-+|+..-+.
T Consensus       113 p~------------------~~s~~i~~~~-~~g~~VIDlSs~fRl~  140 (381)
T PLN02968        113 PH------------------GTTQEIIKAL-PKDLKIVDLSADFRLR  140 (381)
T ss_pred             CH------------------HHHHHHHHHH-hCCCEEEEcCchhccC
Confidence            52                  1345566665 4567999999986543

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.47  E-value=0.00048  Score=58.54  Aligned_cols=60  Identities=25%  Similarity=0.330  Sum_probs=37.4

Q ss_pred             CCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-------cccCCCEEEEcccCC
Q 022900          124 GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-------LLLEVDQIYHLACPA  191 (290)
Q Consensus       124 asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-------~~~~vD~vih~Ag~~  191 (290)
                      .||-.|.+|++++..+|++|+.+.....-.        ....+..+..+-.++       .+.+.|++||+|++.
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLP--------PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcccc--------ccccceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            479999999999999999999997642111        123566666544333       345689999999975

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.45  E-value=0.0025  Score=59.00  Aligned_cols=112  Identities=13%  Similarity=0.055  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCC--chhhhhcccC-----CCCeEEEEcccccccccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKENVMHHFG-----NPNFELIRHDVVEPLLLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~  180 (290)
                      +.++|.|+|++|.+|..++..|+..|.       ++.++|++...  ......++..     ..++.+..  -..+.+.+
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~y~~~~d   80 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD--DPNVAFKD   80 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec--ChHHHhCC
Confidence            345899999999999999999988654       68888874321  1211111111     01233322  22467788


Q ss_pred             CCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 022900          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS  230 (290)
                      .|+||-+||..  .....+-.+.++.|..-...+.+.+++.. .  .++.+|.
T Consensus        81 aDiVVitaG~~--~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         81 ADVALLVGARP--RGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             CCEEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            99999999953  33345678889999999999999988843 2  5666664

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.43  E-value=0.00074  Score=62.82  Aligned_cols=107  Identities=22%  Similarity=0.298  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc-------------------h-----hhhhcccCCCCe
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-------------------K-----ENVMHHFGNPNF  166 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~-----~~~~~~~~~~~v  166 (290)
                      ..++.++|+|.| .|++|.+++..|+..|. +++++|...-..                   +     +.+.++...-++
T Consensus        20 ~~L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            346678999999 59999999999999998 899998752100                   0     111111122345


Q ss_pred             EEEEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          167 ELIRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       167 ~~~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      +.+..+++..    .+.+.|+||.+..                 |...-..+-++|.+.++.+|+.++.+.||.
T Consensus        99 ~~~~~~~~~~~~~~~~~~~DlVid~~D-----------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688         99 EAIVQDVTAEELEELVTGVDLIIDATD-----------------NFETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             EEEeccCCHHHHHHHHcCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            5666666543    3567899998753                 222233456778888888999888776663

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.41  E-value=0.0012  Score=61.31  Aligned_cols=69  Identities=25%  Similarity=0.276  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCe---EEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      +++|.|.||||++|.++++.|.++|+.   +..+.+.....+. +.  ...  .+....|+.+..+.++|+||.+++
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~--~~g--~~i~v~d~~~~~~~~vDvVf~A~g   72 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LS--FKG--KELKVEDLTTFDFSGVDIALFSAG   72 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-ee--eCC--ceeEEeeCCHHHHcCCCEEEECCC
Confidence            468999999999999999999998874   4666554222211 11  122  233444555555678999998876

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.40  E-value=0.0036  Score=57.86  Aligned_cols=109  Identities=17%  Similarity=0.100  Sum_probs=74.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCC--chhhhhcccCC-----CCeEEEEcccccccccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKENVMHHFGN-----PNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~-----~~v~~~~~D~~~~~~~~vD  182 (290)
                      .+|.|+|++|++|.+++..|..+|.       +++++|++...  .+....++...     ..+.+. .+ ..+.+.++|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~-~~~~~~daD   81 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-TD-PEEAFKDVD   81 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-cC-hHHHhCCCC
Confidence            4899999999999999999998874       78888875311  22222222110     122222 11 245678899


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEc
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTS  229 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---riV~vS  229 (290)
                      +||.+||..  .....+-.+.++.|..-...+.+.+++.+.   .++.+|
T Consensus        82 vVVitAG~~--~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        82 AALLVGAFP--RKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            999999963  333456788899999999999999988753   455554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.37  E-value=0.00043  Score=61.84  Aligned_cols=69  Identities=16%  Similarity=0.216  Sum_probs=44.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc------cCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL------LEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~------~~vD~vih~Ag~  190 (290)
                      |+|+|+||||. |+.+++.|.++|++|++..+...+.....    ......+..+.+....+      .++|+||+.+.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            57999999999 99999999999999999887543322211    11112222222211211      359999998764

This enzyme was found to be a monomer by gel filtration.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.36  E-value=0.0056  Score=56.45  Aligned_cols=112  Identities=12%  Similarity=0.102  Sum_probs=74.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      +.++|.|+|| |.+|..++..++..| .+++++|++.+.......+..     ......+...+-. +.+.+.|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEECC
Confidence            4568999996 999999999999988 688999986543322111111     1112233221212 3678899999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      |...  ....+..+.+..|..-...+.+.+.+.+.  .++++|.
T Consensus        82 g~~~--~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         82 GVQR--KEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            8632  23445677888899888888888877763  4666654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.35  E-value=0.0014  Score=63.08  Aligned_cols=76  Identities=17%  Similarity=0.073  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccccc-CCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~vD~vih~Ag~~  191 (290)
                      .++++|+|||++| +|.++++.|+++|++|++.++......+....+ ....+.+..++....... ++|.||+++|+.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQEL-LEEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHH-HhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            4578999999877 999999999999999999987543322222222 222344443332222233 489999999863

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.34  E-value=0.0046  Score=56.76  Aligned_cols=108  Identities=18%  Similarity=0.206  Sum_probs=74.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccCC----CCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGN----PNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.|.|+ |.+|..++..|+.+|  .+|+++|++.........++...    ....+...|.  +.+.++|++|.+++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~   77 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA   77 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence            47999996 999999999999999  58999998754333222222111    1223333443  457889999999985


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      .  .....+..+.+..|+.-...+.+.+++.+.  .++.++
T Consensus        78 ~--~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          78 N--QKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            3  223445667788899999888888877663  455443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.33  E-value=0.0043  Score=55.51  Aligned_cols=109  Identities=17%  Similarity=0.087  Sum_probs=74.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC----CeEEEEeCCCCCchhhhhcc---cCCC-CeEEEEcccccccccCCCEEEEcccC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARG----DSVIVVDNFFTGRKENVMHH---FGNP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~---~~~~-~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |.|.||+|.+|..++..|+..|    .+|+++|++....+....++   .... ...+...+-..+.+.++|+||..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799998999999999999998    68999998654433322222   1111 23333333335678899999999985


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      ...  ...+.......|+.-...+.+.+.+.+.  .++.+|
T Consensus        81 ~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            422  2334556778899999999999888764  555554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.30  E-value=0.0044  Score=56.69  Aligned_cols=110  Identities=13%  Similarity=0.077  Sum_probs=73.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccC-----CCCeEEEE-cccccccccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-----NPNFELIR-HDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~~-~D~~~~~~~~vD~vih~A  188 (290)
                      +++|.|.|+ |.+|..++..++..|. +|+++|++.+..+....+...     .....+.. .|.  +.+.++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence            468999997 9999999999999875 899999865444332222111     11122221 233  4578899999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      |..  .....+-.+.+..|+.-...+++.+.+...  .+|+++-
T Consensus        79 ~~p--~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         79 GVP--RKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCC--CCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            853  333344566777888888888888777653  4555543

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.26  E-value=0.0057  Score=56.11  Aligned_cols=108  Identities=19%  Similarity=0.220  Sum_probs=75.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC------CCCeEEEEcccccccccCCCEEEEccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG------NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      +|.|.|+ |.||..++..|+.+|.  +++++|.+....+....++..      ..++.+...|  .+.+.+.|+||-.||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--y~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--YDDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--HHHhCCCCEEEECCC
Confidence            4789997 9999999999998875  789998865444333333221      1234555444  467889999999999


Q ss_pred             CCCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          190 PASPVHYKFN--PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~--~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ....  ...+  -.+.++.|..-...+.+.+++.+.  .++.+|-
T Consensus        78 ~~~k--pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          78 PSID--PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             CCCC--CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            6322  2233  477899999999999999988874  4444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.25  E-value=0.0013  Score=56.53  Aligned_cols=105  Identities=15%  Similarity=0.195  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~  169 (290)
                      .+.+++|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.+....-+++.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            35678999999 89999999999999997 7888876521000                      111111122334444


Q ss_pred             Ecccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          170 RHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       170 ~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      ..++.++    .+.++|+||.+..         ++        ..-..+-+.|.+.++.+|+.+..+.+|
T Consensus        97 ~~~i~~~~~~~~~~~~D~Vi~~~d---------~~--------~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356        97 KERVTAENLELLINNVDLVLDCTD---------NF--------ATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             hhcCCHHHHHHHHhCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            4444332    3567999998753         11        222345677888888888888766555

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.25  E-value=0.007  Score=47.54  Aligned_cols=93  Identities=17%  Similarity=0.262  Sum_probs=54.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEE-EeCCCCCchhhhhccc----CCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIV-VDNFFTGRKENVMHHF----GNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~-~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +|.|.||||++|..+++.|.+.-. +++. +.+.. .....+....    ...++.+..  ...+.+.++|+||.|.+. 
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~~-   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR-SAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALPH-   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT-TTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SCH-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc-ccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCch-
Confidence            689999999999999999999643 5444 44432 1111121111    112233333  334456889999998751 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                                       .....+...+.+.|.++|=.|+.
T Consensus        77 -----------------~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   77 -----------------GASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             -----------------HHHHHHHHHHHHTTSEEEESSST
T ss_pred             -----------------hHHHHHHHHHhhCCcEEEeCCHH
Confidence                             11334555667777766666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.24  E-value=0.0052  Score=56.51  Aligned_cols=109  Identities=17%  Similarity=0.136  Sum_probs=73.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC----CCeEEEE-cccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN----PNFELIR-HDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~v~~~~-~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|+|+ |.||..++..|+..|.  ++.++|.+.........++...    ....+.. .|.  +.+.++|+||-+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy--~~~~~adivvitaG   80 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY--SVTANSKVVIVTAG   80 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH--HHhCCCCEEEECCC
Confidence            48999995 9999999999998865  7888987654333222222110    1123332 333  24789999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ...  ....+-.+.++.|..-...+.+.+++.+.  .++.+|-
T Consensus        81 ~~~--k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          81 ARQ--NEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            632  23345677889999999999988887763  5555553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.23  E-value=0.0038  Score=58.91  Aligned_cols=110  Identities=11%  Similarity=0.090  Sum_probs=74.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-e----EEE--E--eCCCCCchhhhhcccCC-----CCeEEEEcccccccccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-S----VIV--V--DNFFTGRKENVMHHFGN-----PNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~----V~~--~--~r~~~~~~~~~~~~~~~-----~~v~~~~~D~~~~~~~~vD  182 (290)
                      -+|.|+|++|.+|.+++-.|+..|. .    |.+  +  +++.+.......++...     .++.+...  ..+.+.++|
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~--~y~~~kdaD  122 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID--PYEVFEDAD  122 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC--CHHHhCCCC
Confidence            4899999999999999999998864 2    333  3  55444433333332211     12332222  246788999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcC
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS  230 (290)
                      +||-.||..  .....+-.+.++.|+.-...+.+.+++.. .  ++|.+|-
T Consensus       123 IVVitAG~p--rkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       123 WALLIGAKP--RGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             EEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999963  33345677889999999999999998843 3  5666664

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.20  E-value=0.011  Score=54.54  Aligned_cols=114  Identities=12%  Similarity=0.084  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-----CCCCeEEEE-cccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELIR-HDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~-~D~~~~~~~~vD~vih  186 (290)
                      .+.++|.|.| +|.+|..++..++..|. +|+++|.+.........+..     ......+.. .|.  +.+.++|+||.
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~   80 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIV   80 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEE
Confidence            3457899999 69999999999999995 88889886543321111111     112233432 343  46789999999


Q ss_pred             cccCCCCCCC---CCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          187 LACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       187 ~Ag~~~~~~~---~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      +||....+..   +.+-.+.+..|+.-...+.+.+.+.+.  .++++|-
T Consensus        81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9996432211   114566778888888888888777663  4555554

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.18  E-value=0.003  Score=50.54  Aligned_cols=102  Identities=22%  Similarity=0.333  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchh----------------------hhhcccCCCCeEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIRHD  172 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~~~~v~~~~~D  172 (290)
                      .++|+|.| .|.+|..+++.|+..|. +++++|...-....                      .+.+.....+++.+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            36899999 89999999999999998 78888764211100                      01111123456666666


Q ss_pred             cccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          173 VVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       173 ~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +.++    .+.++|+||.+..                 |...-..+-+.|.+.++.+|..+..+.+|
T Consensus        81 ~~~~~~~~~~~~~d~vi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDCVD-----------------SLAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEESS-----------------SHHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccccccccccCCCEEEEecC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            6333    3457999998764                 12223356678888888888888766655

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.15  E-value=0.0011  Score=59.69  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      .++++++|+|+ |++|++++..|++.|++|++++|+..+..+..........+.....|  +....++|+|||+....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--~~~~~~~DivInatp~g  189 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD--ELPLHRVDLIINATSAG  189 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh--hhcccCccEEEECCCCC
Confidence            35679999996 89999999999999999999988643333222222111222332222  22345799999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.14  E-value=0.0061  Score=55.71  Aligned_cols=108  Identities=20%  Similarity=0.180  Sum_probs=73.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhccc---CC-CCeEEEEcccccccccCCCEEEEcccCCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHF---GN-PNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~---~~-~~v~~~~~D~~~~~~~~vD~vih~Ag~~~  192 (290)
                      |.|.| +|.+|..++..|+..|  .+++++|++.+.......++.   .. ....+...+- .+.+.++|+||.+||.. 
T Consensus         1 i~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p-   77 (300)
T cd00300           1 ITIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAP-   77 (300)
T ss_pred             CEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCC-
Confidence            46788 5889999999999988  689999986544333332221   11 1223332221 35788999999999953 


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                       .....+-.+.+..|+.-...+.+.+++.+.  .++.+|.
T Consensus        78 -~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          78 -RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence             223446677888999999999999888764  5555553

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.13  E-value=0.0011  Score=59.96  Aligned_cols=74  Identities=20%  Similarity=0.242  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|+|+ |++|++++..|.+.| .+|++++|+.++..+..........+.+ ..| ....+.+.|+|||+...
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~  195 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE-LQEELADFDLIINATSA  195 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc-chhccccCCEEEECCcC
Confidence            56789999995 999999999999999 6899999864333222222211111222 112 12445679999998764

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.11  E-value=0.00069  Score=62.27  Aligned_cols=74  Identities=18%  Similarity=0.211  Sum_probs=55.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----CCCeEEEEeCCCCCchhhhhcccC-C----CCeEEEEccccccc-----ccCCCE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIA----RGDSVIVVDNFFTGRKENVMHHFG-N----PNFELIRHDVVEPL-----LLEVDQ  183 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~-~----~~v~~~~~D~~~~~-----~~~vD~  183 (290)
                      .++|.|||||-|..+++++.+    .|...-+..|+.++..+.+..... .    +...++.+|..|++     ...+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            699999999999999999999    677777778776555554443321 1    23337888997775     346899


Q ss_pred             EEEcccCC
Q 022900          184 IYHLACPA  191 (290)
Q Consensus       184 vih~Ag~~  191 (290)
                      |+||+|+.
T Consensus        87 ivN~vGPy   94 (423)
T KOG2733|consen   87 IVNCVGPY   94 (423)
T ss_pred             EEeccccc
Confidence            99999964

>PLN02602 lactate dehydrogenase

Probab=97.09  E-value=0.011  Score=55.22  Aligned_cols=109  Identities=14%  Similarity=0.128  Sum_probs=75.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC----CCCeEEEE-cccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG----NPNFELIR-HDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~v~~~~-~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|+|+ |.||..++..|+.+|.  ++.++|.+.........++..    .....+.. .|  -+.+.+.|+||-+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d--y~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD--YAVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC--HHHhCCCCEEEECCC
Confidence            69999995 9999999999998875  788898865433333322211    11233332 23  234789999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ...  ....+-.+.+..|+.-...+.+.+++.+.  .++.+|-
T Consensus       115 ~~~--k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        115 ARQ--IPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            632  23345677889999999999999888763  5666653

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.05  E-value=0.0059  Score=58.68  Aligned_cols=110  Identities=15%  Similarity=0.122  Sum_probs=73.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC---CC----eEEEEeCC--CCCchhhhhcccC-----CCCeEEEEcccccccccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR---GD----SVIVVDNF--FTGRKENVMHHFG-----NPNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~---G~----~V~~~~r~--~~~~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~vD  182 (290)
                      -+|+||||+|.||.+|+-.+++-   |.    .++++|..  .........++..     ...+.+...  ..+.+.++|
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~--~~ea~~daD  201 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTD--LDVAFKDAH  201 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEEC--CHHHhCCCC
Confidence            48999999999999999999872   42    34555652  2222222222211     113444432  357788999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcC
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTST  230 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS  230 (290)
                      +||-.||..  .....+-.+.++.|..-...+.++..+.+   .+|+.+.|
T Consensus       202 vvIitag~p--rk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         202 VIVLLDDFL--IKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             EEEECCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            999999963  33345677889999999999999987765   36777765

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.05  E-value=0.0098  Score=47.98  Aligned_cols=100  Identities=17%  Similarity=0.175  Sum_probs=64.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEEcccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIRHDVV  174 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~~D~~  174 (290)
                      +|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.+....-+++.+..++.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            488999 59999999999999998 6888875421110                      01111111234445555444


Q ss_pred             c----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          175 E----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       175 ~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +    +.+.++|+||.+..                 |......+.+.|++.++.++..++...+|
T Consensus        80 ~~~~~~~~~~~diVi~~~d-----------------~~~~~~~l~~~~~~~~i~~i~~~~~g~~g  127 (143)
T cd01483          80 EDNLDDFLDGVDLVIDAID-----------------NIAVRRALNRACKELGIPVIDAGGLGLGG  127 (143)
T ss_pred             hhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCCCcEE
Confidence            3    23567999998764                 12334456788888888888888876544

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.04  E-value=0.0034  Score=55.00  Aligned_cols=105  Identities=20%  Similarity=0.186  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~  169 (290)
                      .+.+++|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.+....-+++.+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            35678999999 89999999999999998 6777754411000                      001111112345555


Q ss_pred             Eccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       170 ~~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      ..++..    +.+.++|+||.+..         ++        ..-..+-+.|.+.++.+|+.+..+.+|
T Consensus        97 ~~~i~~~~~~~~~~~~DvVi~~~d---------~~--------~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757          97 NERLDAENAEELIAGYDLVLDCTD---------NF--------ATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             cceeCHHHHHHHHhCCCEEEEcCC---------CH--------HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            555433    23457999998764         11        122345677888888888887766444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.03  E-value=0.0026  Score=50.42  Aligned_cols=96  Identities=20%  Similarity=0.277  Sum_probs=56.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH-CCCeEEEE-eCCC-CCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIA-RGDSVIVV-DNFF-TGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~-~G~~V~~~-~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~  193 (290)
                      ++|.|.|++|-+|+.+++.+.+ .|.++.+. ++.. ......+.+..+.....+...|-.++.+.++|++|...     
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT-----   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT-----   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC-----
Confidence            4799999999999999999999 57776554 5443 11122222222212222222244455556699999864     


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS  230 (290)
                                   +-..+...++.|.+.++.+|.-.|
T Consensus        76 -------------~p~~~~~~~~~~~~~g~~~ViGTT   99 (124)
T PF01113_consen   76 -------------NPDAVYDNLEYALKHGVPLVIGTT   99 (124)
T ss_dssp             --------------HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred             -------------ChHHhHHHHHHHHhCCCCEEEECC
Confidence                         234456678888888877666544

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=97.02  E-value=0.0065  Score=55.11  Aligned_cols=105  Identities=15%  Similarity=0.212  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc----------------------hhhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR----------------------KENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~----------------------~~~~~~~~~~~~v~~~~  170 (290)
                      +...+|+|.| .|++|.++++.|+..|. +++++|...-..                      .+.+.++...-+++...
T Consensus        17 L~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~   95 (286)
T cd01491          17 LQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST   95 (286)
T ss_pred             HhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence            5567999999 78999999999999997 677776542111                      01112222334566666


Q ss_pred             cccccccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          171 HDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       171 ~D~~~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      .++.++.+.++|+||.+..         +...        ...+-++|.+.++.+|...+.+.||.
T Consensus        96 ~~~~~~~l~~fdvVV~~~~---------~~~~--------~~~in~~c~~~~ipfI~a~~~G~~G~  144 (286)
T cd01491          96 GPLTTDELLKFQVVVLTDA---------SLED--------QLKINEFCHSPGIKFISADTRGLFGS  144 (286)
T ss_pred             ccCCHHHHhcCCEEEEecC---------CHHH--------HHHHHHHHHHcCCEEEEEeccccEEE
Confidence            6666677788999987643         2222        23344778888889999998887763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=97.01  E-value=0.0017  Score=56.39  Aligned_cols=157  Identities=11%  Similarity=-0.053  Sum_probs=89.1

Q ss_pred             CCCEEEEEcCCchHHHHHHH-----HHHHCC----CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccccc-CCCEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVD-----RLIARG----DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-EVDQI  184 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~-----~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~vD~v  184 (290)
                      ++++.++-+++|+|+..|..     ++-+.+    |.|++++|.....           ++.+-..|.  .-+. .||..
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------ritw~el~~--~Gip~sc~a~   77 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------RITWPELDF--PGIPISCVAG   77 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------ccccchhcC--CCCceehHHH
Confidence            44567888899999988776     333334    7888888754222           222211111  1111 34555


Q ss_pred             EEcccCCC-CCCCCCChHHHHHHHHH-----HHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          185 YHLACPAS-PVHYKFNPVKTIKTNVV-----GTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       185 ih~Ag~~~-~~~~~~~~~~~~~~Nv~-----gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      +|.+|... .+..  .|...|+-||.     .|..+.++...+.   +.+|.+|.+++|-......++|+..  ...+..
T Consensus        78 vna~g~n~l~P~r--RWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~--~qgfd~  153 (315)
T KOG3019|consen   78 VNAVGNNALLPIR--RWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIV--HQGFDI  153 (315)
T ss_pred             HhhhhhhccCchh--hcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccc--cCChHH
Confidence            55555321 1112  23334444544     4777888877765   2699999999998777777888763  222322


Q ss_pred             hHHHHHHHHHHHHH-HhCCCeeEEEeeeeecccC
Q 022900          256 YFFSFSLIFLVFIS-QFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       256 ~k~~~e~~~~~~~~-~~gl~~~ilR~~~lr~~~~  288 (290)
                      ...-+..+...... ....+.+++|.+.|.+++|
T Consensus       154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gG  187 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGG  187 (315)
T ss_pred             HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCC
Confidence            22211111111111 1246788999999999887

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.98  E-value=0.0092  Score=54.70  Aligned_cols=109  Identities=14%  Similarity=0.119  Sum_probs=72.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccC-----CCCeEEE-EcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-----NPNFELI-RHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~-~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|.|+ |.+|..++..|+.+|. +|+++|...............     .....+. ..|..  .+.++|+||-+||
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~--~~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA--DTANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH--HhCCCCEEEEcCC
Confidence            47999995 9999999999999886 899999854322212111111     1111222 23432  3678999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ..  .....+..+.+..|..-...+++.+.+.+.  .+|.+|.
T Consensus        79 ~p--~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LP--RKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CC--CCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            53  222345567888999999999998877653  5666654

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.98  E-value=0.0068  Score=53.78  Aligned_cols=106  Identities=17%  Similarity=0.109  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~  168 (290)
                      ..++.++|+|.|+ |++|.++++.|+..|. +++++|...-...                      +.+.++...-+++.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3467789999995 9999999999999997 6777765421110                      01111112234555


Q ss_pred             EEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          169 IRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       169 ~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +...+.++    .+.++|+||.+..         ++        ..-..+-++|.+.++.+|+.++...+|
T Consensus       107 ~~~~i~~~~~~~~~~~~DiVi~~~D---------~~--------~~r~~ln~~~~~~~ip~v~~~~~g~~G  160 (245)
T PRK05690        107 INARLDDDELAALIAGHDLVLDCTD---------NV--------ATRNQLNRACFAAKKPLVSGAAIRMEG  160 (245)
T ss_pred             EeccCCHHHHHHHHhcCCEEEecCC---------CH--------HHHHHHHHHHHHhCCEEEEeeeccCCc
Confidence            55554432    3467999998763         12        122345567888888888766554333

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.94  E-value=0.0039  Score=53.71  Aligned_cols=74  Identities=15%  Similarity=0.252  Sum_probs=54.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       111 ~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      -...++++|+|.|| |-+|...++.|++.|++|+++++..   .+.+........+.+...+.....+.+.|+||-+.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~---~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT   78 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL---TENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT   78 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC---CHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence            34578999999995 9999999999999999999997532   22222333334577766666666778899888654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.94  E-value=0.0066  Score=52.07  Aligned_cols=106  Identities=16%  Similarity=0.292  Sum_probs=66.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~  169 (290)
                      ..++++|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++..
T Consensus        18 ~L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            35678999998 56699999999999998 5788865421100                      011122122344444


Q ss_pred             Eccccc---ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          170 RHDVVE---PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       170 ~~D~~~---~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      ...+.+   +.+.++|+||.+..         +.        .....+-+.|.+.++.+|+.++.+.||.
T Consensus        97 ~~~~~~~~~~~~~~~dvVi~~~~---------~~--------~~~~~ln~~c~~~~ip~i~~~~~G~~G~  149 (197)
T cd01492          97 TDDISEKPEEFFSQFDVVVATEL---------SR--------AELVKINELCRKLGVKFYATGVHGLFGF  149 (197)
T ss_pred             ecCccccHHHHHhCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence            443332   23567999997642         12        1223345778888889999998887774

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.93  E-value=0.0079  Score=53.21  Aligned_cols=105  Identities=14%  Similarity=0.103  Sum_probs=64.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchh----------------------hhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~----------------------~~~~~~~~~~v~~~  169 (290)
                      ..++.+|+|.| .|++|..++..|+..|. +++++|...-....                      .+.++...-+++.+
T Consensus        21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            45678999999 89999999999999997 67777665211100                      01111112234444


Q ss_pred             Eccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       170 ~~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      ...+.+    +.+.+.|+||.+..         ++        .....+-++|.+.++.+|+.++.+.+|
T Consensus       100 ~~~i~~~~~~~~~~~~DlVvd~~D---------~~--------~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       100 NAKLDDAELAALIAEHDIVVDCTD---------NV--------EVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             eccCCHHHHHHHhhcCCEEEEcCC---------CH--------HHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            433332    23457899998763         12        223344577888888888876655444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.92  E-value=0.0064  Score=56.50  Aligned_cols=95  Identities=22%  Similarity=0.209  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCe---EEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ++++|.|+||||++|..+++.|.++++.   +..+.... ...+.+.  .....+++...|.  ..+.++|+++-+++..
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~-~aG~~l~--~~~~~l~~~~~~~--~~~~~vD~vFla~p~~   77 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSE-SAGHSVP--FAGKNLRVREVDS--FDFSQVQLAFFAAGAA   77 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcc-cCCCeec--cCCcceEEeeCCh--HHhcCCCEEEEcCCHH
Confidence            3468999999999999999999988773   33443211 1111111  1222344443332  2357899999876410


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                        -...++..+.+.|+++|=.|+..
T Consensus        78 ------------------~s~~~v~~~~~~G~~VIDlS~~f  100 (336)
T PRK05671         78 ------------------VSRSFAEKARAAGCSVIDLSGAL  100 (336)
T ss_pred             ------------------HHHHHHHHHHHCCCeEEECchhh
Confidence                              01236666777787777777765

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.92  E-value=0.0074  Score=51.79  Aligned_cols=106  Identities=17%  Similarity=0.289  Sum_probs=66.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch------------------------hhhhcccCCCCeEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK------------------------ENVMHHFGNPNFEL  168 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~------------------------~~~~~~~~~~~v~~  168 (290)
                      .++.+|+|.|+ |++|.++++.|+..|. +++++|...-...                        +.+.++...-+++.
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            56679999995 5599999999999997 5888875421100                        00112212334555


Q ss_pred             EEcccc------cccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCC
Q 022900          169 IRHDVV------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP  237 (290)
Q Consensus       169 ~~~D~~------~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~  237 (290)
                      +..++.      ++.+.++|+||.+-.                 |......+-+.|.+.+..+|+.++.+.||.-
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~v  153 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEE-----------------NYERTAKVNDVCRKHHIPFISCATYGLIGYA  153 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEEEE
Confidence            544443      123457899996532                 1222334557788888899999988877743

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.89  E-value=0.0081  Score=56.00  Aligned_cols=97  Identities=12%  Similarity=0.182  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccC---CC-CeEEEEcccccccccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFG---NP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~---~~-~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      +++|.|.||+|++|.++++.|.+. +.+++++.+.... .+.+.....   .. ...+...|  +....++|+|+-|...
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~vD~Vf~alP~   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSDVHPHLRGLVDLVLEPLD--PEILAGADVVFLALPH   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHHhCcccccccCceeecCC--HHHhcCCCEEEECCCc
Confidence            468999999999999999999987 6687776553211 111111111   00 11222222  2244679999986641


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV  233 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~v  233 (290)
                                        .....++..+.+.|+++|=.|+..-
T Consensus        79 ------------------~~~~~~v~~a~~aG~~VID~S~~fR  103 (343)
T PRK00436         79 ------------------GVSMDLAPQLLEAGVKVIDLSADFR  103 (343)
T ss_pred             ------------------HHHHHHHHHHHhCCCEEEECCcccC
Confidence                              1134556666677888888887643

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.87  E-value=0.011  Score=55.26  Aligned_cols=96  Identities=15%  Similarity=0.207  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccC--------C--CCeEEEEcccccccccCCCEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG--------N--PNFELIRHDVVEPLLLEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~--------~--~~v~~~~~D~~~~~~~~vD~v  184 (290)
                      +++|.|+||+|++|+++++.|.+... +++++.+........+.....        .  ....+...|  .+.+.++|+|
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~DvV   80 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTD--PEAVDDVDIV   80 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCC--HHHhcCCCEE
Confidence            46899999999999999999998755 777774432222211211110        0  112222222  1234578999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      +-+...                ++  ...+.+.+.+.|+++|-.|+.
T Consensus        81 f~a~p~----------------~~--s~~~~~~~~~~G~~vIDls~~  109 (349)
T PRK08664         81 FSALPS----------------DV--AGEVEEEFAKAGKPVFSNASA  109 (349)
T ss_pred             EEeCCh----------------hH--HHHHHHHHHHCCCEEEECCch
Confidence            876431                21  133446677778877777765

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.86  E-value=0.0047  Score=57.85  Aligned_cols=106  Identities=17%  Similarity=0.086  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~  168 (290)
                      ..+++.+|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++.
T Consensus        24 ~~L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            346678999999 69999999999999997 6787876521100                      01111112234555


Q ss_pred             EEccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          169 IRHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       169 ~~~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +..++..    +.+.++|+||.+..                 |...-..+-++|.+.++.+|+.+..+.+|
T Consensus       103 ~~~~i~~~~~~~~~~~~DvVvd~~d-----------------~~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        103 SVRRLTWSNALDELRDADVILDGSD-----------------NFDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             EEeecCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            5555543    23567999998763                 12222235567888888888887765544

>PRK08328 hypothetical protein; Provisional

Probab=96.85  E-value=0.0039  Score=54.81  Aligned_cols=106  Identities=22%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc------------------hh-----hhhcccCCCCeEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR------------------KE-----NVMHHFGNPNFEL  168 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~------------------~~-----~~~~~~~~~~v~~  168 (290)
                      ...+++|+|.| .|++|.++++.|+..|. +++++|...-..                  +.     .+.+...+-+++.
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            35677999999 89999999999999997 677886542110                  00     0111112223444


Q ss_pred             EEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          169 IRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       169 ~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      ....+.++    .+.++|+||.+..                 |...-..+-++|.+.++.+|+.++.+.||.
T Consensus       103 ~~~~~~~~~~~~~l~~~D~Vid~~d-----------------~~~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        103 FVGRLSEENIDEVLKGVDVIVDCLD-----------------NFETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             EeccCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            44444332    3457888887653                 111122344678888888998888776663

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.84  E-value=0.0043  Score=58.55  Aligned_cols=105  Identities=20%  Similarity=0.197  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCC-----------------c-hh----hhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG-----------------R-KE----NVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-----------------~-~~----~~~~~~~~~~v~~~  169 (290)
                      ..++++|+|.| .|++|.+++..|+..|. +++++|+..-.                 . .+    .+.+....-+++..
T Consensus       132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            35678899997 69999999999999998 78888775100                 0 01    11111122234444


Q ss_pred             Eccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       170 ~~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      ...+.+    +.+.++|+||++..         ++        ..-..+-++|.+.++.+|+.+..+.+|
T Consensus       211 ~~~~~~~~~~~~~~~~D~Vv~~~d---------~~--------~~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        211 QERVTSDNVEALLQDVDVVVDGAD---------NF--------PTRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             eccCChHHHHHHHhCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            433332    23467999998764         11        112235577888888888887665444

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.84  E-value=0.008  Score=53.76  Aligned_cols=114  Identities=20%  Similarity=0.152  Sum_probs=75.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEE---EEeCC-CCCchhhhhcccCCCCeEEEE-cccccccccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVI---VVDNF-FTGRKENVMHHFGNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~---~~~r~-~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~~vD~vih~A  188 (290)
                      ..+.+|.|.||+|+||+.|...| +....|.   +.|.. .+.....+.++.....+.-.. .|-.+..+.+.|+||-=|
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPA  104 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPA  104 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecC
Confidence            45678999999999999986544 5554433   33322 223333344443333333333 455666788999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      |+  |......-++.|++|-.-...+..++.+...  .+.++|-
T Consensus       105 GV--PRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  105 GV--PRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             CC--CCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            95  4445566788999999999999998877653  6666664

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.83  E-value=0.0059  Score=53.02  Aligned_cols=106  Identities=22%  Similarity=0.233  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch---------------------hhhhcccCCCCeEEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK---------------------ENVMHHFGNPNFELIR  170 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~---------------------~~~~~~~~~~~v~~~~  170 (290)
                      .++..+|+|.| .|++|..+++.|+..|. +++++|...-...                     +.+..+...-+++.+.
T Consensus        25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            35677999999 79999999999999998 5888876521000                     0011111223444444


Q ss_pred             ccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CCeEEEEcCCccccC
Q 022900          171 HDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GARFLLTSTSEVYGD  236 (290)
Q Consensus       171 ~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~riV~vSS~~vyg~  236 (290)
                      ..+.+    +.+.++|+||.+..                 |...-..+.+.|.+. ++.+|+.+...-|+.
T Consensus       104 ~~i~~~~~~~~~~~~DvVI~a~D-----------------~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~~  157 (212)
T PRK08644        104 EKIDEDNIEELFKDCDIVVEAFD-----------------NAETKAMLVETVLEHPGKKLVAASGMAGYGD  157 (212)
T ss_pred             eecCHHHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence            44443    23457899997742                 122223455667776 778888766555543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.81  E-value=0.0015  Score=59.61  Aligned_cols=73  Identities=12%  Similarity=0.213  Sum_probs=50.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---ccccccccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..++|.||+||.|.-++++|..+|.+-.+..|+..+.......+  ++++....+   +..++...+.++|+||+|+.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L--G~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL--GPEAAVFPLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc--CccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence            47999999999999999999999988766666543322221111  233333333   34566677899999999964

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.81  E-value=0.0032  Score=51.23  Aligned_cols=75  Identities=21%  Similarity=0.305  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      .++++|+|+|+ |.+|..+++.|.+.| ++|++++|+.....+..... ....+.....|. ++...++|+||++....
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF-GELGIAIAYLDL-EELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-hhcccceeecch-hhccccCCEEEeCcCCC
Confidence            45679999996 999999999999996 78999987643332222221 111011111121 22367899999998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.76  E-value=0.0058  Score=56.85  Aligned_cols=67  Identities=18%  Similarity=0.210  Sum_probs=43.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEE---EEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVI---VVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      +|.|.||||++|..|++.|.++++.++   .+.+.....+ .+.  ...  .+....|+....+.++|++|-+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~-~~~--~~~--~~~~~~~~~~~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGR-KVT--FKG--KELEVNEAKIESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCC-eee--eCC--eeEEEEeCChHHhcCCCEEEECCC
Confidence            489999999999999999999888643   3334321111 111  112  344444554556678999999887

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.74  E-value=0.0033  Score=54.10  Aligned_cols=37  Identities=32%  Similarity=0.446  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .+++|+|.|+|. |.+|.++++.|.+.|++|++.+++.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            367899999995 7999999999999999999888653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.68  E-value=0.0075  Score=52.06  Aligned_cols=73  Identities=12%  Similarity=0.112  Sum_probs=56.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ...++++|+|.| .|-+|..-++.|++.|++|++++....   +.+..+....++.++..+.....+.+.|.||-+-
T Consensus         5 l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at   77 (205)
T TIGR01470         5 ANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQGGITWLARCFDADILEGAFLVIAAT   77 (205)
T ss_pred             EEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECC
Confidence            346789999999 789999999999999999999975432   3333333445899999888877788889888543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.68  E-value=0.011  Score=55.09  Aligned_cols=95  Identities=18%  Similarity=0.150  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..++|.|.||||++|..+++.|.++++   ++..+..... ....+..  ..  .++...++..+.+.++|+||.+++..
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs-aGk~~~~--~~--~~~~v~~~~~~~~~~~D~vf~a~p~~   80 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS-AGKKVTF--EG--RDYTVEELTEDSFDGVDIALFSAGGS   80 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC-CCCeeee--cC--ceeEEEeCCHHHHcCCCEEEECCCcH
Confidence            456899999999999999999999887   3333322111 1111111  11  22333344445567899999877621


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                        -...+...+.+.|+++|=.|+..
T Consensus        81 ------------------~s~~~~~~~~~~g~~VIDlS~~f  103 (344)
T PLN02383         81 ------------------ISKKFGPIAVDKGAVVVDNSSAF  103 (344)
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCchh
Confidence                              12233344455677777777764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.67  E-value=0.005  Score=55.89  Aligned_cols=74  Identities=18%  Similarity=0.121  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccC-CCCeEEEEcccccccccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ..+++|+|.| +|+.|++++..|.+.|. +|++++|+..+.+........ .....+...+-..+.+.++|+|||+.
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence            4568999999 68899999999999997 799998865443333222211 12233333333334556799999993

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.67  E-value=0.008  Score=55.04  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=30.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ++|.|+| .|.+|..++..|+++|++|++++++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            5799999 99999999999999999999999864

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.66  E-value=0.023  Score=51.99  Aligned_cols=105  Identities=17%  Similarity=0.142  Sum_probs=72.8

Q ss_pred             EEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC-----CCCeEEEEcccccccccCCCEEEEcccCCCC
Q 022900          121 VTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG-----NPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (290)
Q Consensus       121 VTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~  193 (290)
                      |.| +|.||.+++..|+.++.  ++.++|++....+....++..     ..++.+...|  .+.+.+.|+||-.||... 
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daDivVitag~~r-   76 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGD--YSDCKDADLVVITAGAPQ-   76 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCC--HHHHCCCCEEEECCCCCC-
Confidence            345 69999999999998865  788998865444433333321     1234444322  457889999999999632 


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                       ....+-.+.++.|+.-...+.+.+++.+.  .++.+|.
T Consensus        77 -k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        77 -KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence             23456678899999999999999888764  5666653

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.63  E-value=0.021  Score=53.20  Aligned_cols=100  Identities=15%  Similarity=0.132  Sum_probs=56.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccC------CCC--eEEEEcccccccccCCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFG------NPN--FELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~------~~~--v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      ++|.|+|++|++|.++++.|.+++ .+++.+................      ...  .+..-.++..+.+.++|+|+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a   80 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSA   80 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEe
Confidence            379999999999999999998876 4777773321111111111110      000  1111112222244679999987


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vy  234 (290)
                      ..                .|+.  ..+...+.+.|+++|..|+..=+
T Consensus        81 ~p----------------~~~s--~~~~~~~~~~G~~VIDlsg~fR~  109 (341)
T TIGR00978        81 LP----------------SEVA--EEVEPKLAEAGKPVFSNASNHRM  109 (341)
T ss_pred             CC----------------HHHH--HHHHHHHHHCCCEEEECChhhcc
Confidence            64                1222  12235666678888888876433

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.63  E-value=0.039  Score=50.37  Aligned_cols=107  Identities=14%  Similarity=0.085  Sum_probs=69.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-----CCCCeEEEE-cccccccccCCCEEEEcccCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELIR-HDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~-~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      |.|.|+ |.+|..++..|+.+|. +|+++|++.+.......+..     ......+.. .|  .+.+.++|+||.++|..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d--~~~l~dADiVIit~g~p   77 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND--YEDIAGSDVVVITAGIP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC--HHHhCCCCEEEEecCCC
Confidence            468997 9999999999998876 99999987543221111111     111223322 34  34578999999999853


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                        .....+-.+.+..|+.-...+++.+.+...  .+|.+|-
T Consensus        78 --~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          78 --RKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             --CCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence              223344455677888888888888777653  4455543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.62  E-value=0.011  Score=55.99  Aligned_cols=106  Identities=21%  Similarity=0.181  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~  169 (290)
                      .+...+|+|.| .|++|..+++.|+..|. +++++|...-...                      +.+.++...-+++.+
T Consensus        39 ~L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            35677999999 89999999999999997 6777765411000                      001111112234445


Q ss_pred             Eccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       170 ~~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      ..++..    +.+.++|+||.+..                 |...-..+-++|.+.++.+|+.+..+.+|.
T Consensus       118 ~~~i~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~G~  171 (392)
T PRK07878        118 EFRLDPSNAVELFSQYDLILDGTD-----------------NFATRYLVNDAAVLAGKPYVWGSIYRFEGQ  171 (392)
T ss_pred             eccCChhHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence            544443    23567899997653                 222223355778888888998888776663

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.55  E-value=0.0074  Score=54.73  Aligned_cols=56  Identities=20%  Similarity=0.274  Sum_probs=43.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ..++|+|+|.|++|.+|+.++..|.++|++|+++.+..    ..+                 .+.+.+.|+||++.|
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----~~L-----------------~~~~~~aDIvI~AtG  211 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----QNL-----------------PELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----hhH-----------------HHHhccCCEEEEccC
Confidence            46889999999999999999999999999999887521    111                 122257899999886

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.55  E-value=0.025  Score=51.93  Aligned_cols=100  Identities=16%  Similarity=0.277  Sum_probs=63.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEEcccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIRHDVV  174 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~~D~~  174 (290)
                      +|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++....++.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            488999 69999999999999997 6777765421110                      01111112234555556665


Q ss_pred             c-----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          175 E-----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       175 ~-----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +     +.+.++|+||.+..                 |...-..+-+.|...++.+|..++.+.+|
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D-----------------n~~ar~~in~~c~~~~ip~I~~gt~G~~G  128 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD-----------------NLAARRHVNKMCLAADVPLIESGTTGFLG  128 (312)
T ss_pred             CccchHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHCCCCEEEEecCccee
Confidence            4     33567899997653                 22233445567788888888888877655

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.54  E-value=0.015  Score=50.94  Aligned_cols=69  Identities=19%  Similarity=0.316  Sum_probs=51.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      |+++|.| .|-+|..+++.|.++|++|++++++.+...+...   .......+.+|-+++.      ..++|++|-..+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~---~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLA---DELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh---hhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            5788888 7999999999999999999999874333222111   1356788888988875      346899996554

>PRK08223 hypothetical protein; Validated

Probab=96.53  E-value=0.023  Score=51.54  Aligned_cols=105  Identities=14%  Similarity=0.043  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~  168 (290)
                      ..+++.+|+|.| .|++|..++..|+..|. +++++|...-...                      +.+.++...-+++.
T Consensus        23 ~kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~  101 (287)
T PRK08223         23 QRLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA  101 (287)
T ss_pred             HHHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            346678999999 79999999999999997 6777765421110                      00111112234555


Q ss_pred             EEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          169 IRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       169 ~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      +...++++    .+.++|+||.+.-         ++      ++..-..+-++|.+.++.+|+.+...
T Consensus       102 ~~~~l~~~n~~~ll~~~DlVvD~~D---------~~------~~~~r~~ln~~c~~~~iP~V~~~~~g  154 (287)
T PRK08223        102 FPEGIGKENADAFLDGVDVYVDGLD---------FF------EFDARRLVFAACQQRGIPALTAAPLG  154 (287)
T ss_pred             EecccCccCHHHHHhCCCEEEECCC---------CC------cHHHHHHHHHHHHHcCCCEEEEeccC
Confidence            55555443    3567899985542         11      12223445677888888888876554

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.51  E-value=0.027  Score=50.34  Aligned_cols=66  Identities=17%  Similarity=0.286  Sum_probs=40.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEE-eCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|+|++|.+|+.+++.+.+. +.+++++ ++........       ....+...+-.++.+.++|+||.++-
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCC
Confidence            58999999999999999988874 6777764 4332221111       11111111222333447899998773

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.49  E-value=0.011  Score=50.10  Aligned_cols=33  Identities=39%  Similarity=0.542  Sum_probs=26.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.|.| .|++|..++..|++.|++|+++|.+.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCCh
Confidence            5788997 99999999999999999999998753

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07411 hypothetical protein; Validated

Probab=96.46  E-value=0.016  Score=54.97  Aligned_cols=106  Identities=16%  Similarity=0.104  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~  168 (290)
                      ..++..+|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++.
T Consensus        34 ~~L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~  112 (390)
T PRK07411         34 KRLKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL  112 (390)
T ss_pred             HHHhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            346678999999 89999999999999997 6777765411100                      01111112234555


Q ss_pred             EEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          169 IRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       169 ~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +...++.+    .+.++|+||.|..         +        ...-..+-++|.+.++.+|+.+..+.||
T Consensus       113 ~~~~~~~~~~~~~~~~~D~Vvd~~d---------~--------~~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        113 YETRLSSENALDILAPYDVVVDGTD---------N--------FPTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             EecccCHHhHHHHHhCCCEEEECCC---------C--------HHHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            55555443    3567999998764         1        2222234577888888888877766555

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.44  E-value=0.0071  Score=59.64  Aligned_cols=73  Identities=19%  Similarity=0.178  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-cccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-LLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~vD~vih~Ag~~  191 (290)
                      .++|+++|+|+ |++|++++..|++.|++|++++|+.++..+... .+..   ..+..+-... .....|+|||+....
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~-~l~~---~~~~~~~~~~~~~~~~diiINtT~vG  450 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELAD-AVGG---QALTLADLENFHPEEGMILANTTSVG  450 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HhCC---ceeeHhHhhhhccccCeEEEecccCC
Confidence            56789999997 899999999999999999998875332222221 1111   1122221111 123468899887653

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.40  E-value=0.02  Score=53.86  Aligned_cols=106  Identities=17%  Similarity=0.223  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~  168 (290)
                      ..+...+|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++.
T Consensus        37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            446678999999 79999999999999997 7888876511000                      00111112234555


Q ss_pred             EEccccc----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          169 IRHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       169 ~~~D~~~----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +...+..    +.+.++|+||.|..                 |...-..+-++|.+.++.+|+.+..+.+|
T Consensus       116 ~~~~i~~~~~~~~~~~~DlVid~~D-----------------n~~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        116 LRERLTAENAVELLNGVDLVLDGSD-----------------SFATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             eeeecCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            5544443    24567999998764                 22223345567888888888877665444

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.38  E-value=0.0065  Score=55.23  Aligned_cols=70  Identities=17%  Similarity=0.194  Sum_probs=48.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ...+++++|+| .|.+|+.+++.|...|.+|++.+|+...... ..    ......+..+-.++.+.+.|+||++.
T Consensus       148 ~l~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~----~~g~~~~~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       148 TIHGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLAR-IT----EMGLIPFPLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CCCCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HCCCeeecHHHHHHHhccCCEEEECC
Confidence            46789999999 5889999999999999999999885422111 11    11222333333345567899999975

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.34  E-value=0.0074  Score=54.67  Aligned_cols=76  Identities=14%  Similarity=0.017  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEc-ccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++++|+|.| +|+.|++++..|.+.|. +|+++.|+.++..+..........+..+.. +-......+.|+|||+...
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            4578999998 69999999999999997 799998864433332222111112211111 1112334678999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.34  E-value=0.047  Score=49.11  Aligned_cols=35  Identities=29%  Similarity=0.368  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~  149 (290)
                      +.+.+|+|.| .|++|.++++.|++.| -+++++|..
T Consensus        28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            5678999999 8999999999999999 478888654

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.33  E-value=0.03  Score=46.96  Aligned_cols=101  Identities=20%  Similarity=0.146  Sum_probs=60.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCC---ch------------------hhhhcccCCCCeEEEEccccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG---RK------------------ENVMHHFGNPNFELIRHDVVE  175 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~---~~------------------~~~~~~~~~~~v~~~~~D~~~  175 (290)
                      +|+|.| .|++|..+++.|++.|. +++++|...-.   ..                  ..+.++....+++.+...+..
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            488999 79999999999999998 58888775310   00                  001111122344444444433


Q ss_pred             ----ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CCeEEEEcCCccccC
Q 022900          176 ----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GARFLLTSTSEVYGD  236 (290)
Q Consensus       176 ----~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~riV~vSS~~vyg~  236 (290)
                          +.+.++|+||.+..                 |...-..+.+.|.+. ++.+|+.+...-||.
T Consensus        80 ~~~~~~l~~~DlVi~~~d-----------------~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~  128 (174)
T cd01487          80 NNLEGLFGDCDIVVEAFD-----------------NAETKAMLAESLLGNKNKPVVCASGMAGFGD  128 (174)
T ss_pred             hhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence                33567999998742                 112223455666555 677777665554543

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.32  E-value=0.028  Score=52.47  Aligned_cols=96  Identities=13%  Similarity=0.187  Sum_probs=57.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEE-eCCCCCchhhhhcccC---CC-CeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGRKENVMHHFG---NP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~---~~-~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++|.|.||||++|..+++.|.+. +.+++.+ +..... .+.+.....   .. ...+...|. ++...++|+||.|...
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVSEVHPHLRGLVDLNLEPIDE-EEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChHHhCccccccCCceeecCCH-HHhhcCCCEEEECCCc
Confidence            47999999999999999999987 5677744 432211 111111111   11 122222232 1222479999988752


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      .                  ....++..+.+.|+++|=.|+..
T Consensus        79 ~------------------~s~~~~~~~~~~G~~VIDlS~~f  102 (346)
T TIGR01850        79 G------------------VSAELAPELLAAGVKVIDLSADF  102 (346)
T ss_pred             h------------------HHHHHHHHHHhCCCEEEeCChhh
Confidence            1                  23456666667788999898874

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.32  E-value=0.043  Score=48.29  Aligned_cols=101  Identities=13%  Similarity=0.154  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~  170 (290)
                      +++.+|+|.| .|++|.++++.|++.|. +++++|...-...                      +.+.++...-+++.+.
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            5667899999 89999999999999997 7888865421000                      0011111122344444


Q ss_pred             cccccc----cc-cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          171 HDVVEP----LL-LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       171 ~D~~~~----~~-~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      ..+..+    .+ .++|+||.+..                 |+..-..+.+.|.+.+..+|...+.+
T Consensus        88 ~~i~~~~~~~l~~~~~D~VvdaiD-----------------~~~~k~~L~~~c~~~~ip~I~s~g~g  137 (231)
T cd00755          88 EFLTPDNSEDLLGGDPDFVVDAID-----------------SIRAKVALIAYCRKRKIPVISSMGAG  137 (231)
T ss_pred             eecCHhHHHHHhcCCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence            444322    22 35899998753                 12233456788888877776665543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.27  E-value=0.016  Score=47.86  Aligned_cols=72  Identities=18%  Similarity=0.222  Sum_probs=51.6

Q ss_pred             CCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEc
Q 022900          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       109 p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      |.-...++++|+|.| .|-+|...++.|++.|++|++++.   ...+.+.+.   ..+.+...++.+..+.+.|+||-+
T Consensus         6 P~~l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp---~~~~~l~~l---~~i~~~~~~~~~~dl~~a~lViaa   77 (157)
T PRK06719          6 PLMFNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP---EICKEMKEL---PYITWKQKTFSNDDIKDAHLIYAA   77 (157)
T ss_pred             ceEEEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC---ccCHHHHhc---cCcEEEecccChhcCCCceEEEEC
Confidence            444567899999999 789999999999999999999853   222222222   245565556666667788888854

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.25  E-value=0.046  Score=48.20  Aligned_cols=100  Identities=18%  Similarity=0.187  Sum_probs=62.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEEcccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIRHDVV  174 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~~D~~  174 (290)
                      +|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.+...+-+++....++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            478888 89999999999999997 6777765411100                      00111112223455555542


Q ss_pred             c------ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          175 E------PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       175 ~------~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +      ..+.++|+||.+..                 |+..-..+-+.|.+.++.+|..++.+.+|
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence            2      23567899998642                 33444556677888888888888776555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.23  E-value=0.0053  Score=56.83  Aligned_cols=73  Identities=25%  Similarity=0.223  Sum_probs=47.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc---c--cCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL---L--LEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~--~~vD~vih~Ag  189 (290)
                      +.+|+|+||+|++|...+.-+...|+.++++...... .+.+..+-.+.-+++.+.|+.+..   .  .++|+|+...|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k-~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK-LELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH-HHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            7899999999999999888888889776666543211 222333322333444555554442   2  25999998877

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.22  E-value=0.02  Score=48.15  Aligned_cols=70  Identities=20%  Similarity=0.142  Sum_probs=46.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ....+++|.|.| .|-||+++++.|..-|.+|++.+|....... ..    ...+   ..+-.++.+.++|+|+.+.-.
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~----~~~~---~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEG-AD----EFGV---EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HH----HTTE---EESSHHHHHHH-SEEEE-SSS
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhh-cc----cccc---eeeehhhhcchhhhhhhhhcc
Confidence            457899999999 8999999999999999999999985432220 10    0112   223445566778988876643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.21  E-value=0.012  Score=51.11  Aligned_cols=36  Identities=31%  Similarity=0.476  Sum_probs=32.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  152 (290)
                      |+|.|.||+|.+|..++..|++.|++|++.+|+.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            479999999999999999999999999999886433

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.09  E-value=0.1  Score=39.75  Aligned_cols=91  Identities=25%  Similarity=0.322  Sum_probs=57.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~  192 (290)
                      ..++++|+|.|| |-+|..=++.|++.|++|++++...    +...     ..+.+..-+. +..+.+.|.||-+.+   
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~~-----~~i~~~~~~~-~~~l~~~~lV~~at~---   69 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFSE-----GLIQLIRREF-EEDLDGADLVFAATD---   69 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHHH-----TSCEEEESS--GGGCTTESEEEE-SS---
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhhh-----hHHHHHhhhH-HHHHhhheEEEecCC---
Confidence            367899999995 9999999999999999999998643    1111     4455665555 366778898884432   


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                            ++    +.|    ..+.+.|++.+ .+++++..-
T Consensus        70 ------d~----~~n----~~i~~~a~~~~-i~vn~~D~p   94 (103)
T PF13241_consen   70 ------DP----ELN----EAIYADARARG-ILVNVVDDP   94 (103)
T ss_dssp             -------H----HHH----HHHHHHHHHTT-SEEEETT-C
T ss_pred             ------CH----HHH----HHHHHHHhhCC-EEEEECCCc
Confidence                  11    122    34556676655 566666543

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.07  E-value=0.081  Score=49.17  Aligned_cols=95  Identities=19%  Similarity=0.211  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ++++|.|.||||++|..+++.|.++.+   ++..+..... ....+.  +....+.+.  |+.+..+.++|+++.+++..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~s-aG~~~~--~~~~~~~v~--~~~~~~~~~~Dvvf~a~p~~   77 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEES-AGETLR--FGGKSVTVQ--DAAEFDWSQAQLAFFVAGRE   77 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCc-CCceEE--ECCcceEEE--eCchhhccCCCEEEECCCHH
Confidence            456899999999999999999998644   5555532211 111111  122233333  44344446899999877521


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                        -...+...+.+.|+++|=.|+..
T Consensus        78 ------------------~s~~~~~~~~~~g~~VIDlS~~f  100 (336)
T PRK08040         78 ------------------ASAAYAEEATNAGCLVIDSSGLF  100 (336)
T ss_pred             ------------------HHHHHHHHHHHCCCEEEECChHh
Confidence                              12344455555677777777664

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.06  E-value=0.02  Score=47.82  Aligned_cols=37  Identities=30%  Similarity=0.458  Sum_probs=32.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ...+++|+|.|+++.+|..+++.|.++|.+|+++.|.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~   77 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK   77 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence            3688999999986678999999999999999998874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.05  E-value=0.0098  Score=55.51  Aligned_cols=76  Identities=22%  Similarity=0.218  Sum_probs=49.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc----ccCCCEEEEc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----LLEVDQIYHL  187 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~----~~~vD~vih~  187 (290)
                      ..+++.|+|.||+|++|.+.++-+...| ..|+....  ....+.++.+-.+.-+++-+.|+.+..    ..++|+|+.|
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s--~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~  232 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS--KEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDC  232 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc--cchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEEC
Confidence            3567899999999999999988888889 45555542  223333333322333444444444433    2369999999


Q ss_pred             ccC
Q 022900          188 ACP  190 (290)
Q Consensus       188 Ag~  190 (290)
                      .|-
T Consensus       233 vg~  235 (347)
T KOG1198|consen  233 VGG  235 (347)
T ss_pred             CCC
Confidence            985

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.03  E-value=0.026  Score=54.69  Aligned_cols=70  Identities=20%  Similarity=0.269  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-
Q 022900          114 RKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-  176 (290)
Q Consensus       114 ~~~k~VlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-  176 (290)
                      ++||+|+||+|                ||-.|.+|++++..+|++|+++.-...     +.   ....++++..+-.++ 
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-----~~---~p~~v~~i~V~ta~eM  325 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-----LA---DPQGVKVIHVESARQM  325 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-----CC---CCCCceEEEecCHHHH
Confidence            78999999987                689999999999999999999863211     10   123455555443333 


Q ss_pred             -----cccCCCEEEEcccCC
Q 022900          177 -----LLLEVDQIYHLACPA  191 (290)
Q Consensus       177 -----~~~~vD~vih~Ag~~  191 (290)
                           ...+.|++|++|++.
T Consensus       326 ~~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        326 LAAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHHhhCCCCEEEEecccc
Confidence                 112379999999975

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.95  E-value=0.027  Score=54.71  Aligned_cols=75  Identities=24%  Similarity=0.211  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++++|+|.| .|++|.+++..|.++|++|+++++............+....+++...+-.. ...++|.||...|+
T Consensus        14 ~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi   88 (480)
T PRK01438         14 WQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGW   88 (480)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCc
Confidence            4578999999 588999999999999999999986532222222222222345555443322 34568999988885

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.90  E-value=0.018  Score=49.60  Aligned_cols=36  Identities=31%  Similarity=0.386  Sum_probs=29.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  153 (290)
                      |++.|.| +|-||..+++.|++.|++|++-.|+.+..
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~   37 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKA   37 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhH
Confidence            4555555 99999999999999999999987655443

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.90  E-value=0.017  Score=52.76  Aligned_cols=69  Identities=19%  Similarity=0.195  Sum_probs=48.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ..+++|+|.| .|.+|..++..|...|.+|++++|+.... +....    ..+..+..+...+.+.+.|+||++.
T Consensus       150 l~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~----~G~~~~~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        150 IHGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHL-ARITE----MGLSPFHLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----cCCeeecHHHHHHHhCCCCEEEECC
Confidence            4678999999 58899999999999999999998863221 11111    1233333333345567899999975

>TIGR01408 Ube1 ubiquitin-activating enzyme E1

Probab=95.87  E-value=0.024  Score=59.79  Aligned_cols=105  Identities=11%  Similarity=0.097  Sum_probs=70.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc----------------------hhhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR----------------------KENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~----------------------~~~~~~~~~~~~v~~~~  170 (290)
                      +...+|+|.| .|++|.++++.|+..|. +++++|...-..                      .+.+.++....+++...
T Consensus        22 L~~s~VLIiG-~gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~  100 (1008)
T TIGR01408        22 MAKSNVLISG-MGGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSSS  100 (1008)
T ss_pred             HhhCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEec
Confidence            4567899999 68899999999999997 677776432100                      01112222334566666


Q ss_pred             cccccccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccC
Q 022900          171 HDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGD  236 (290)
Q Consensus       171 ~D~~~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~  236 (290)
                      .++.++.+.++|+||.+-.         +.        .....+-++|.+.+  +.||+.++.+.||.
T Consensus       101 ~~l~~e~l~~fdvVV~t~~---------~~--------~~~~~in~~cr~~~~~I~fI~~~~~G~~G~  151 (1008)
T TIGR01408       101 VPFNEEFLDKFQCVVLTEM---------SL--------PLQKEINDFCHSQCPPIAFISADVRGLFGS  151 (1008)
T ss_pred             ccCCHHHHcCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCeEEEEEeecceEEE
Confidence            6777777788999997532         22        22334557899988  57888888887773

This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.

>PRK04148 hypothetical protein; Provisional

Probab=95.77  E-value=0.021  Score=45.90  Aligned_cols=89  Identities=24%  Similarity=0.325  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc---cCCCEEEEcccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL---LEVDQIYHLACPA  191 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~vD~vih~Ag~~  191 (290)
                      ++++|++.| .| -|.+++..|.+.|++|+++|.+....+.    . ....++++..|++++.+   .++|.|+-+=   
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~----a-~~~~~~~v~dDlf~p~~~~y~~a~liysir---   85 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEK----A-KKLGLNAFVDDLFNPNLEIYKNAKLIYSIR---   85 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHH----H-HHhCCeEEECcCCCCCHHHHhcCCEEEEeC---
Confidence            457899999 55 8888999999999999999975432211    1 22357889999998865   4788888432   


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL  227 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~  227 (290)
                             .+.++       ...+++.+++.++.+++
T Consensus        86 -------pp~el-------~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         86 -------PPRDL-------QPFILELAKKINVPLII  107 (134)
T ss_pred             -------CCHHH-------HHHHHHHHHHcCCCEEE
Confidence                   22222       33578888888874443

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.77  E-value=0.11  Score=49.80  Aligned_cols=35  Identities=29%  Similarity=0.280  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      .++|.|.| .|++|..++..|+++|++|++++++..
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~   37 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQH   37 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHH
Confidence            46899998 899999999999999999999997543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=95.76  E-value=0.031  Score=58.69  Aligned_cols=157  Identities=17%  Similarity=0.105  Sum_probs=99.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEE-EeCCCCCch--hh-hhccc-CCCCeEEEEcccccc-----------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFTGRK--EN-VMHHF-GNPNFELIRHDVVEP-----------L  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~~~~--~~-~~~~~-~~~~v~~~~~D~~~~-----------~  177 (290)
                      ...|+.+|+||-|+.|.+|+.-|..+|++-++ .+|+--+..  .. +.... ...++.+-..|++..           .
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence            34578999999999999999999999996544 455422211  11 11111 233455555566533           2


Q ss_pred             ccCCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~~~~~---riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +..+-.|+|+|++....-.++    +..+.-+.-+.||+|+=+.-++...   -||+.||.+---.+.+.          
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ---------- 1915 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ---------- 1915 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc----------
Confidence            345789999998754444443    3445556678889988877766542   68888887542112111          


Q ss_pred             ChhhhhHHHHHHHHHHHHHHhCCCeeEEEee
Q 022900          251 NPIGTYFFSFSLIFLVFISQFRPSRKACRFF  281 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~  281 (290)
                      .-||....+.|++|++=.. +|++.+.+.-+
T Consensus      1916 tNYG~aNS~MERiceqRr~-~GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRH-EGFPGTAIQWG 1945 (2376)
T ss_pred             cccchhhHHHHHHHHHhhh-cCCCcceeeee
Confidence            2377777778888877444 58888766543

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.76  E-value=0.11  Score=40.60  Aligned_cols=29  Identities=24%  Similarity=0.579  Sum_probs=25.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCeEEEE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVV  146 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~-G~~V~~~  146 (290)
                      ++.|+|++|.+|..++..|.+. +.++.++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av   30 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVAL   30 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEE
Confidence            4789999999999999999994 7788777

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.72  E-value=0.035  Score=50.30  Aligned_cols=57  Identities=21%  Similarity=0.267  Sum_probs=45.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..++++|+|+|+++.+|+.++..|.++|++|+++.+..                     +-..+...+.|+||...|.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECCCC
Confidence            47899999999999999999999999999999987531                     1122345568999988774

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=95.71  E-value=0.32  Score=44.41  Aligned_cols=160  Identities=15%  Similarity=0.100  Sum_probs=92.4

Q ss_pred             CEEEEEcC-CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc----
Q 022900          117 LRIVVTGG-AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL----  179 (290)
Q Consensus       117 k~VlVTGa-sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~----  179 (290)
                      ..|+|.|. +--+++.++..|.+||+-|+++..+.+.  +...+.....+++....|..+..            +.    
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed--~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~   81 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAED--EKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHV   81 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHH--HHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCC
Confidence            47899995 7899999999999999999998764322  22222223445666666663331            11    


Q ss_pred             ---C-CCEEEEcccC------C---CCCC--CCCChHHHHHHHHHHHHHHHHHH----HH---cCCeEEEEcCCccccCC
Q 022900          180 ---E-VDQIYHLACP------A---SPVH--YKFNPVKTIKTNVVGTLNMLGLA----KR---VGARFLLTSTSEVYGDP  237 (290)
Q Consensus       180 ---~-vD~vih~Ag~------~---~~~~--~~~~~~~~~~~Nv~gt~~ll~a~----~~---~~~riV~vSS~~vyg~~  237 (290)
                         + -....++.|+      .   +|..  ....+.++++.|+.-...+++..    +.   ...++|++.-+-.+..+
T Consensus        82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence               1 1122333332      1   1111  11345677888888877766664    33   22466665543322211


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC---CCeeEEEeeeeeccc
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR---PSRKACRFFILLYRN  287 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g---l~~~ilR~~~lr~~~  287 (290)
                      ...         -.|......+.+.+.+.+.++.+   ++++.++++++.+.+
T Consensus       162 ~Pf---------hspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~  205 (299)
T PF08643_consen  162 PPF---------HSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN  205 (299)
T ss_pred             CCc---------cCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence            111         12444445555666666666655   999999999998873

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.69  E-value=0.037  Score=58.41  Aligned_cols=72  Identities=28%  Similarity=0.299  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-Ce-------------EEEEeCCCCCchhhhhcccCCCCeEEEEccccccc---
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DS-------------VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL---  177 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---  177 (290)
                      .+++|+|.| +|+||+..++.|++.+ +.             |++.+++....++....   .++++.+..|+.+..   
T Consensus       568 ~~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~---~~~~~~v~lDv~D~e~L~  643 (1042)
T PLN02819        568 KSQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG---IENAEAVQLDVSDSESLL  643 (1042)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh---cCCCceEEeecCCHHHHH
Confidence            478999999 5999999999998763 33             66666543222222111   135666777776542   


Q ss_pred             --ccCCCEEEEcccC
Q 022900          178 --LLEVDQIYHLACP  190 (290)
Q Consensus       178 --~~~vD~vih~Ag~  190 (290)
                        +.++|+||++...
T Consensus       644 ~~v~~~DaVIsalP~  658 (1042)
T PLN02819        644 KYVSQVDVVISLLPA  658 (1042)
T ss_pred             HhhcCCCEEEECCCc
Confidence              2569999998753

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.68  E-value=0.04  Score=52.89  Aligned_cols=67  Identities=18%  Similarity=0.278  Sum_probs=49.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~A  188 (290)
                      |+|+|+|+ |.+|.++++.|.++|++|++++++...    .........+.++.+|.+++.      ..++|.||-+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~----~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER----LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH----HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            47999996 999999999999999999999874322    222212245778888887652      45688888654

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.64  E-value=0.025  Score=54.08  Aligned_cols=73  Identities=15%  Similarity=0.209  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|.| +|.+|..++..|.+.|. +++++.|...+. +.+...++  ....+..|-....+.+.|+||++.+-
T Consensus       179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~~--~~~~~~~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAFR--NASAHYLSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHhc--CCeEecHHHHHHHhccCCEEEECcCC
Confidence            5678999999 59999999999999996 688887754332 22222222  12344444445567789999998874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.62  E-value=0.026  Score=51.17  Aligned_cols=75  Identities=19%  Similarity=0.115  Sum_probs=48.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCC-CeEEEEccccccccc-CCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPLLL-EVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~-~vD~vih~Ag~  190 (290)
                      .++++++|.| +|+.+++++..|++.|. +|+++.|..++..+......... .+....  ..+.... +.|+|||+-..
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~--~~~~~~~~~~dliINaTp~  200 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA--LADLEGLEEADLLINATPV  200 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc--ccccccccccCEEEECCCC
Confidence            4678999999 89999999999999995 79999886555444333221111 111222  2112212 68999998765


Q ss_pred             C
Q 022900          191 A  191 (290)
Q Consensus       191 ~  191 (290)
                      .
T Consensus       201 G  201 (283)
T COG0169         201 G  201 (283)
T ss_pred             C
Confidence            3

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.56  E-value=0.056  Score=52.10  Aligned_cols=67  Identities=21%  Similarity=0.176  Sum_probs=44.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      |+|.|.||+|.+|..+++.|.+.|++|++++|+.....+....    ..+.+  .+-..+.+.++|+||-+.-
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~----~gv~~--~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE----LGVEY--ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH----cCCee--ccCHHHHhccCCEEEEecC
Confidence            4799999999999999999999999999998753221111111    11211  1112234567898887653

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.56  E-value=0.044  Score=53.05  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..+++|+|.| .|..|.++++.|.++|+.|++.|+............+....+.+..++-..+.+.++|.||...|+.
T Consensus        12 ~~~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~   88 (458)
T PRK01710         12 IKNKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMR   88 (458)
T ss_pred             hcCCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence            4567899999 7889999999999999999999975422211111111223455555544344456789999987753

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.55  E-value=0.11  Score=49.86  Aligned_cols=70  Identities=23%  Similarity=0.264  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------~~~vD~vih  186 (290)
                      ..+++|+|.|+ |.+|..+++.|.++|++|++++++.+    ....... ...+.++.+|.+++.      +.++|.||-
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~----~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPE----RAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH----HHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            34689999995 99999999999999999999986532    2222211 135678888987664      346888885


Q ss_pred             cc
Q 022900          187 LA  188 (290)
Q Consensus       187 ~A  188 (290)
                      +.
T Consensus       304 ~~  305 (453)
T PRK09496        304 LT  305 (453)
T ss_pred             CC
Confidence            43

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.54  E-value=0.03  Score=54.60  Aligned_cols=71  Identities=14%  Similarity=0.194  Sum_probs=46.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++++|+| +|++|++++..|.+.|++|++.+|+..+..+... ...   ...+..+.. ..+.++|+||||...
T Consensus       330 ~~~k~vlIiG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~-~~~---~~~~~~~~~-~~l~~~DiVInatP~  400 (477)
T PRK09310        330 LNNQHVAIVG-AGGAAKAIATTLARAGAELLIFNRTKAHAEALAS-RCQ---GKAFPLESL-PELHRIDIIINCLPP  400 (477)
T ss_pred             cCCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hhc---cceechhHh-cccCCCCEEEEcCCC
Confidence            4678999999 5899999999999999999988875332222211 111   111111111 124578999998754

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.49  E-value=0.061  Score=48.69  Aligned_cols=37  Identities=27%  Similarity=0.284  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+.+++|+|+++.+|..++..+...|++|++++++.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~  201 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE  201 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3567999999999999999999999999999887653

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.46  E-value=0.056  Score=44.79  Aligned_cols=36  Identities=28%  Similarity=0.492  Sum_probs=29.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+||+|+|.|.+..+|+.++..|.++|+.|+.+...
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~   69 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK   69 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCC
Confidence            789999999999999999999999999999998654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.45  E-value=0.15  Score=48.99  Aligned_cols=100  Identities=16%  Similarity=0.159  Sum_probs=62.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC------eEEEEeCCCCCch----------h------------hhhcccCCCCeEEE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD------SVIVVDNFFTGRK----------E------------NVMHHFGNPNFELI  169 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~------~V~~~~r~~~~~~----------~------------~~~~~~~~~~v~~~  169 (290)
                      +|+|.| +|+||.++++.|+..|.      +++++|...-...          +            .+.++...-+++..
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~   79 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL   79 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence            488998 89999999999999987      7888865421110          0            01111122234444


Q ss_pred             Eccccc--------ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          170 RHDVVE--------PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       170 ~~D~~~--------~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      ...+..        ..+.++|+||++.-                 |+..-..+-+.|...++.+|..++.+.+|
T Consensus        80 ~~~v~~~~~~~~~~~f~~~~DvVi~alD-----------------n~~aR~~vn~~C~~~~iPli~~gt~G~~G  136 (435)
T cd01490          80 QNRVGPETEHIFNDEFWEKLDGVANALD-----------------NVDARMYVDRRCVYYRKPLLESGTLGTKG  136 (435)
T ss_pred             ecccChhhhhhhhHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCEEEEeccccee
Confidence            443321        22456898887642                 34444466678888888888888776555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.43  E-value=0.44  Score=39.61  Aligned_cols=146  Identities=16%  Similarity=0.059  Sum_probs=81.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccc-ccc-------------cccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-VEP-------------LLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~-~~~-------------~~~~vD  182 (290)
                      .+|+|.||-|-+|++.+..+.++++-|.-+|-..  +++ .      ..-.+++.|- ..+             .-+++|
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~e--Ne~-A------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSE--NEQ-A------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecc--ccc-c------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            4799999999999999999999999888776421  111 0      0111222221 111             113599


Q ss_pred             EEEEcccCCCCCCC-----CCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          183 QIYHLACPASPVHY-----KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       183 ~vih~Ag~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      .|++.||-......     .+|-+-+++-.|....--.+.+.+.-   .-+-+++--...+...+          .-.|+
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg----------MIGYG  144 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG----------MIGYG  144 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc----------ccchh
Confidence            99999985433221     23344455555543332333333222   12333333222221111          12589


Q ss_pred             hhHHHHHHHHHHHHHH-hCCCeeEEEee
Q 022900          255 TYFFSFSLIFLVFISQ-FRPSRKACRFF  281 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~-~gl~~~ilR~~  281 (290)
                      ..|.+..++++++..+ .|++-...-+.
T Consensus       145 MAKaAVHqLt~SLaak~SGlP~gsaa~~  172 (236)
T KOG4022|consen  145 MAKAAVHQLTSSLAAKDSGLPDGSAALT  172 (236)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCceeEE
Confidence            9999999999998865 47765544333

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.40  E-value=0.025  Score=51.28  Aligned_cols=74  Identities=19%  Similarity=0.077  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCC-C--CeEEEEcccc--cccccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGN-P--NFELIRHDVV--EPLLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~--~v~~~~~D~~--~~~~~~vD~vih~  187 (290)
                      .++++++|.| +|+.|++++-.|++.|. +|++++|..++..+........ .  .+..  .+..  +....++|+|||+
T Consensus       125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~--~~~~~~~~~~~~~divINa  201 (283)
T PRK14027        125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVG--VDARGIEDVIAAADGVVNA  201 (283)
T ss_pred             cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEe--cCHhHHHHHHhhcCEEEEc
Confidence            4568999999 69999999999999997 6888887644333332221111 1  1222  2221  2234568999998


Q ss_pred             ccC
Q 022900          188 ACP  190 (290)
Q Consensus       188 Ag~  190 (290)
                      .-.
T Consensus       202 Tp~  204 (283)
T PRK14027        202 TPM  204 (283)
T ss_pred             CCC
Confidence            643

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.39  E-value=0.029  Score=53.66  Aligned_cols=72  Identities=18%  Similarity=0.410  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|+..+..+.... ++.   ..+..+-..+.+.+.|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~-~g~---~~i~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE-LGG---EAVKFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-cCC---eEeeHHHHHHHHhhCCEEEECCCC
Confidence            56789999995 999999999999999 6899998854332222221 121   233333333455679999998763

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.36  E-value=0.079  Score=42.91  Aligned_cols=37  Identities=30%  Similarity=0.419  Sum_probs=34.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..++|+|.|.|.+.-+|..++..|.++|++|+.+++.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~   61 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK   61 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC
Confidence            4789999999999999999999999999999998753

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.36  E-value=0.13  Score=49.06  Aligned_cols=33  Identities=36%  Similarity=0.440  Sum_probs=29.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.|.| .|.+|..++..|++.|++|++++++.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~   33 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQ   33 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCH
Confidence            3688898 89999999999999999999998764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.055  Score=49.36  Aligned_cols=38  Identities=29%  Similarity=0.294  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ....||+|.|.|.+|.+|..++..|+++|++|+++.+.
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~  192 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR  192 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence            34789999999999999999999999999999999664

>PLN00203 glutamyl-tRNA reductase

Probab=95.30  E-value=0.036  Score=54.45  Aligned_cols=74  Identities=20%  Similarity=0.273  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+++|+|.|+ |.+|..+++.|...|. +|+++.|+..+...... ..+...+.+...|-....+.+.|+||.+.+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~-~~~g~~i~~~~~~dl~~al~~aDVVIsAT~  338 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALRE-EFPDVEIIYKPLDEMLACAAEADVVFTSTS  338 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HhCCCceEeecHhhHHHHHhcCCEEEEccC
Confidence            56789999996 9999999999999996 68888876433332222 212222334444434455678999998765

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.26  E-value=0.085  Score=50.76  Aligned_cols=75  Identities=15%  Similarity=0.099  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..+++|+|+|+ |.+|.++++.|.++|++|++.|...... .+.+...  ...+.+..++..+....++|.||...|+.
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~--~~gi~~~~g~~~~~~~~~~d~vv~spgi~   78 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKM--FDGLVFYTGRLKDALDNGFDILALSPGIS   78 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhc--cCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence            35679999995 6899999999999999999998653321 1111110  12455555544444456799999988863

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.24  E-value=0.023  Score=52.17  Aligned_cols=34  Identities=26%  Similarity=0.176  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      +.+|+|+||+|.+|..++..+...|. +|++++++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s  189 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGS  189 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            37999999999999999887777898 79988754

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.17  E-value=0.099  Score=45.70  Aligned_cols=76  Identities=12%  Similarity=0.176  Sum_probs=57.0

Q ss_pred             CCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       109 p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |.....++++|+|.| .|-++..=++.|++.|++|++++-.   ..+.+......+++.++.-+.....+.+.+.||-+.
T Consensus        18 pi~l~~~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~---i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaAT   93 (223)
T PRK05562         18 FISLLSNKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKK---FSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIAT   93 (223)
T ss_pred             eeEEECCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCC---CCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECC
Confidence            333556789999999 6889999899999999999999643   223333344556788888887777788888888543

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.16  E-value=0.026  Score=51.15  Aligned_cols=72  Identities=26%  Similarity=0.239  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc---cccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~vD~vih~Ag  189 (290)
                      ..+.+++|+||+|.+|..+++.+...|.+|+++++.... .+.+... ..  -.++..+-...   ...++|++++++|
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~d~v~~~~g  235 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK-LKILKEL-GA--DYVIDGSKFSEDVKKLGGADVVIELVG  235 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHc-CC--cEEEecHHHHHHHHhccCCCEEEECCC
Confidence            346799999999999999999999999999998764322 2222111 11  12222211111   1236999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14852 hypothetical protein; Provisional

Probab=95.15  E-value=0.13  Score=53.92  Aligned_cols=108  Identities=14%  Similarity=0.037  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCC------Cc----------------hhhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT------GR----------------KENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~------~~----------------~~~~~~~~~~~~v~~  168 (290)
                      ..+++.+|+|.| .|++|..+++.|+..|. +++++|...-      +.                .+.+.++...-+++.
T Consensus       328 ~kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~  406 (989)
T PRK14852        328 RRLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS  406 (989)
T ss_pred             HHHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence            346678999999 89999999999999997 5666654310      00                011111112235666


Q ss_pred             EEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          169 IRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       169 ~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      +...+.++    .+.++|+||.+.-.         .      .+..-..+.+.|.+.++.+|..++.+.+|
T Consensus       407 ~~~~I~~en~~~fl~~~DiVVDa~D~---------~------~~~~rr~l~~~c~~~~IP~I~ag~~G~~g  462 (989)
T PRK14852        407 FPEGVAAETIDAFLKDVDLLVDGIDF---------F------ALDIRRRLFNRALELGIPVITAGPLGYSC  462 (989)
T ss_pred             EecCCCHHHHHHHhhCCCEEEECCCC---------c------cHHHHHHHHHHHHHcCCCEEEeeccccCe
Confidence            65555433    35679999976531         0      11112345667888888888887765444

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.15  E-value=0.025  Score=46.74  Aligned_cols=65  Identities=18%  Similarity=0.112  Sum_probs=41.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |++|-+.| .|-+|..+++.|++.|++|++.+|+.+..++...    . .  ....|-..+...++|+|+-+-
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~-g--~~~~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE----A-G--AEVADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH----T-T--EEEESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH----h-h--hhhhhhhhhHhhcccceEeec
Confidence            57899999 6999999999999999999999875322222211    1 1  233344444555667777553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.14  E-value=0.038  Score=50.77  Aligned_cols=36  Identities=22%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+||+|.+|..++..+...|.+|++++++
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~  185 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS  185 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            357899999999999999988888889999988764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.12  E-value=0.91  Score=45.19  Aligned_cols=149  Identities=17%  Similarity=0.242  Sum_probs=88.3

Q ss_pred             CCcCCCCCCEEEEEcC-CchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhccc-----CCCCeEEEEcccccc-----
Q 022900          109 PLGLKRKGLRIVVTGG-AGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHF-----GNPNFELIRHDVVEP-----  176 (290)
Q Consensus       109 p~~~~~~~k~VlVTGa-sG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~-----~~~~v~~~~~D~~~~-----  176 (290)
                      |......++.++|||| -|.||.+++..|+..|++||+..-+. ..+.+-.+.+.     ....+-++..+....     
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            5556678899999997 57999999999999999999985443 33333333322     122344554433111     


Q ss_pred             --------c-------------ccCCCEEEEcccCCCCCCC-CCCh--HHHHHHHHHHHHHHHHHHHHcC----C----e
Q 022900          177 --------L-------------LLEVDQIYHLACPASPVHY-KFNP--VKTIKTNVVGTLNMLGLAKRVG----A----R  224 (290)
Q Consensus       177 --------~-------------~~~vD~vih~Ag~~~~~~~-~~~~--~~~~~~Nv~gt~~ll~a~~~~~----~----r  224 (290)
                              +             ...+|.+|-.|++...... .-++  +..+++-+....+++...++.+    +    +
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence                    0             1137999999997543321 1122  3344454555556666555432    1    4


Q ss_pred             EEEEcCC--ccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH
Q 022900          225 FLLTSTS--EVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       225 iV~vSS~--~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                      +|+-.|-  +.||             -.-.|+.+|.+.+.++..|..+
T Consensus       549 VVLPgSPNrG~FG-------------gDGaYgEsK~aldav~~RW~sE  583 (866)
T COG4982         549 VVLPGSPNRGMFG-------------GDGAYGESKLALDAVVNRWHSE  583 (866)
T ss_pred             EEecCCCCCCccC-------------CCcchhhHHHHHHHHHHHhhcc
Confidence            6665553  2333             2246888888887777666654

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.09  E-value=0.077  Score=48.04  Aligned_cols=57  Identities=23%  Similarity=0.309  Sum_probs=44.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ...||+|+|.|.+..+|+.++..|.++|++|+++.+....                     ..+...+.|+||..+|.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l~~~~~~ADIvi~avG~  212 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------LRHHVRNADLLVVAVGK  212 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------HHHHHhhCCEEEEcCCC
Confidence            4679999999999999999999999999999998653211                     12334567888888773

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.08  E-value=0.044  Score=51.69  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..++|.|.||.|.+|..+++.|.+.|+.|+++++.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            45789999999999999999999999999999874

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.08  E-value=0.34  Score=41.59  Aligned_cols=36  Identities=28%  Similarity=0.331  Sum_probs=31.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      .++.++|+|.| .|++|..++..|++.|. +++++|..
T Consensus        18 ~L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35678999999 68999999999999998 69998776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.00  E-value=0.043  Score=45.48  Aligned_cols=70  Identities=26%  Similarity=0.303  Sum_probs=43.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ....+|+++|+| -|.+|+-+++.|...|.+|++.+.+.-   ..++....  .++...   .++.+...|++|.+.|.
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi---~alqA~~d--Gf~v~~---~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPI---RALQAAMD--GFEVMT---LEEALRDADIFVTATGN   88 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHH---HHHHHHHT--T-EEE----HHHHTTT-SEEEE-SSS
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChH---HHHHhhhc--CcEecC---HHHHHhhCCEEEECCCC
Confidence            346789999999 999999999999999999999976432   22222222  233332   34566778999987773

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.99  E-value=0.034  Score=52.43  Aligned_cols=73  Identities=16%  Similarity=0.218  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEE--EcccccccccCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI--RHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~--~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..++|+|.|+ |.+|...++.+...|.+|++++|+..+.. .+..... ..+...  ..+...+.+.+.|+||++++.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~-~l~~~~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLR-QLDAEFG-GRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHHHhcC-ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            4467999985 89999999999999999999987533221 1111111 111111  111223345679999998854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.98  E-value=0.12  Score=48.27  Aligned_cols=71  Identities=21%  Similarity=0.221  Sum_probs=43.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEE-cc--cccccccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR-HD--VVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~-~D--~~~~~~~~vD~vih~Ag  189 (290)
                      .+.+|+|.| +|.||..++..+...|.+|++++.+..+..+...+. +. . .++. .+  ...+...++|++|.+.|
T Consensus       183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-Ga-~-~vi~~~~~~~~~~~~~~~D~vid~~g  256 (360)
T PLN02586        183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-GA-D-SFLVSTDPEKMKAAIGTMDYIIDTVS  256 (360)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-CC-c-EEEcCCCHHHHHhhcCCCCEEEECCC
Confidence            577999977 599999998888888999988876543332222211 11 1 1111 11  11112236899999887

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=94.97  E-value=0.2  Score=47.00  Aligned_cols=100  Identities=17%  Similarity=0.138  Sum_probs=57.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HCCCe---EEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-cccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLI-ARGDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-LLLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~-~~G~~---V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~vD~vih~Ag~~  191 (290)
                      ++|.|.||||-+|+.+++.|. ++...   ++.++-.....+   .-........  ..++.+. .+.++|+++.++|- 
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~---~~~f~~~~~~--v~~~~~~~~~~~vDivffa~g~-   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQA---APSFGGTTGT--LQDAFDIDALKALDIIITCQGG-   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCC---cCCCCCCcce--EEcCcccccccCCCEEEEcCCH-
Confidence            478999999999999999999 55553   344432111111   1111222332  2344443 67889999999872 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ  239 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~  239 (290)
                                     +  -+..+...++++|...++++.++.|-...+
T Consensus        75 ---------------~--~s~~~~p~~~~aG~~~~VIDnSSa~Rmd~d  105 (366)
T TIGR01745        75 ---------------D--YTNEIYPKLRESGWQGYWIDAASSLRMKDD  105 (366)
T ss_pred             ---------------H--HHHHHHHHHHhCCCCeEEEECChhhhcCCC
Confidence                           1  133455567777754445555555543333

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.96  E-value=0.34  Score=45.26  Aligned_cols=94  Identities=19%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCe---EEEEeCC-CCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIA-RGDS---VIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~-~G~~---V~~~~r~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      +.++|.|.||||++|..+++.|.+ ....   +..+... .....  +  .+....+.+...|  ...+.++|+++-+++
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~--~--~~~~~~l~v~~~~--~~~~~~~Divf~a~~   77 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKT--V--QFKGREIIIQEAK--INSFEGVDIAFFSAG   77 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCC--e--eeCCcceEEEeCC--HHHhcCCCEEEECCC
Confidence            346899999999999999999996 5555   4444322 11111  1  1122344444443  334578999998875


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      ..                  -...+...+.+.|+.+|=.||..
T Consensus        78 ~~------------------~s~~~~~~~~~~G~~VID~Ss~f  102 (347)
T PRK06728         78 GE------------------VSRQFVNQAVSSGAIVIDNTSEY  102 (347)
T ss_pred             hH------------------HHHHHHHHHHHCCCEEEECchhh
Confidence            21                  12334444555666666666654

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.95  E-value=0.15  Score=46.95  Aligned_cols=26  Identities=35%  Similarity=0.451  Sum_probs=23.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD  141 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~  141 (290)
                      +++|.|.||||-+|+.+++.|.++..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            36899999999999999999999754

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.95  E-value=0.049  Score=52.23  Aligned_cols=72  Identities=25%  Similarity=0.341  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|.| +|.+|..+++.|...|. +|++++|+..+..+.... ++   ...+..+-....+.++|+||.+.+.
T Consensus       180 ~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~-~g---~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEE-FG---GEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-cC---CcEeeHHHHHHHhccCCEEEECCCC
Confidence            5678999999 59999999999999997 788888754332222222 12   1233333233445679999998763

>PRK14851 hypothetical protein; Provisional

Probab=94.90  E-value=0.17  Score=51.39  Aligned_cols=104  Identities=13%  Similarity=0.071  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCC------Cc----------------hhhhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT------GR----------------KENVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~------~~----------------~~~~~~~~~~~~v~~~  169 (290)
                      .+++.+|+|.| .|++|.+++..|+..|. +++++|...-      +.                .+.+.++...-+++.+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            35678999999 89999999999999997 5666654310      00                0011111123356666


Q ss_pred             Ecccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          170 RHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       170 ~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      ...+.++    .+.++|+||.+.-.         +      .+..-..+.+.|.+.++.+|+.+..+
T Consensus       119 ~~~i~~~n~~~~l~~~DvVid~~D~---------~------~~~~r~~l~~~c~~~~iP~i~~g~~G  170 (679)
T PRK14851        119 PAGINADNMDAFLDGVDVVLDGLDF---------F------QFEIRRTLFNMAREKGIPVITAGPLG  170 (679)
T ss_pred             ecCCChHHHHHHHhCCCEEEECCCC---------C------cHHHHHHHHHHHHHCCCCEEEeeccc
Confidence            6666543    35679999965521         0      01112245667888888887766543

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.89  E-value=0.068  Score=51.19  Aligned_cols=67  Identities=25%  Similarity=0.223  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+++|+|.| .|.||..++..|...|.+|++++++..+..+...   .  .+++.  + .++.+.++|+||.+.|
T Consensus       210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~---~--G~~v~--~-l~eal~~aDVVI~aTG  276 (425)
T PRK05476        210 IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM---D--GFRVM--T-MEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh---c--CCEec--C-HHHHHhCCCEEEECCC
Confidence            5789999999 6999999999999999999999875433322211   1  12222  1 2344567888887765

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=94.89  E-value=0.23  Score=47.60  Aligned_cols=105  Identities=12%  Similarity=0.135  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~  170 (290)
                      +...+|+|.| +|++|.++++.|+.-|. +++++|...-...                      +.+.++..+.+++++.
T Consensus        18 L~~s~VlliG-~gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~   96 (425)
T cd01493          18 LESAHVCLLN-ATATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVE   96 (425)
T ss_pred             HhhCeEEEEc-CcHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            4567899998 66799999999999997 6888865421100                      0112222223345554


Q ss_pred             cccc------cccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          171 HDVV------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       171 ~D~~------~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      .++.      ...+.++|+||.+-.         +.        .-...+.+.|.+.++.+|+++|.+.||.
T Consensus        97 e~~~~ll~~~~~f~~~fdiVI~t~~---------~~--------~~~~~L~~~c~~~~iPlI~~~s~G~~G~  151 (425)
T cd01493          97 ESPEALLDNDPSFFSQFTVVIATNL---------PE--------STLLRLADVLWSANIPLLYVRSYGLYGY  151 (425)
T ss_pred             cccchhhhhHHHHhcCCCEEEECCC---------CH--------HHHHHHHHHHHHcCCCEEEEecccCEEE
Confidence            4432      123456888884321         11        1123456778888889999999998883

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.83  E-value=0.12  Score=47.02  Aligned_cols=75  Identities=12%  Similarity=0.050  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCC--CchhhhhcccCC---CCeEEEEccc---ccccccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT--GRKENVMHHFGN---PNFELIRHDV---VEPLLLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~--~~~~~~~~~~~~---~~v~~~~~D~---~~~~~~~vD~v  184 (290)
                      .++++++|.| +|+.+++++-.|+..|. +|++++|+..  .+.+.+.+.+..   ..+.+...+-   ......+.|+|
T Consensus       122 ~~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        122 IKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            4678999999 57789999999999986 7889988642  122222222211   1123332221   11234578999


Q ss_pred             EEccc
Q 022900          185 YHLAC  189 (290)
Q Consensus       185 ih~Ag  189 (290)
                      ||+.-
T Consensus       201 INaTp  205 (288)
T PRK12749        201 TNGTK  205 (288)
T ss_pred             EECCC
Confidence            99754

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.78  E-value=0.15  Score=46.22  Aligned_cols=36  Identities=25%  Similarity=0.273  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  152 (290)
                      .++|.|.| +|.+|..++..|+..|++|++.+++.+.
T Consensus         5 ~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~   40 (286)
T PRK07819          5 IQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEEL   40 (286)
T ss_pred             ccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            35899999 5999999999999999999999986543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.78  E-value=0.14  Score=39.34  Aligned_cols=65  Identities=26%  Similarity=0.401  Sum_probs=46.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      |+|.| .|-+|..+++.|.+.+.+|++++++    ++...... ...+.++.+|.+++.      +.++|.+|-+..
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d----~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRD----PERVEELR-EEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESS----HHHHHHHH-HTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECC----cHHHHHHH-hcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            67888 5789999999999977799999864    23232222 233889999998875      356888886653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.75  E-value=0.1  Score=50.78  Aligned_cols=73  Identities=21%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..+++|+|.| .|..|.++++.|.++|+.|++.|+......+    ......+.+..++-..+.+.++|.||...|+.
T Consensus        13 ~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~----~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~   85 (473)
T PRK00141         13 ELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHK----LIEVTGVADISTAEASDQLDSFSLVVTSPGWR   85 (473)
T ss_pred             ccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHH----HHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence            5678899999 8999999999999999999999875332211    11112444444422233455789999988863

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=94.74  E-value=0.059  Score=49.48  Aligned_cols=72  Identities=22%  Similarity=0.369  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|+..+..+.... ++.   ..+..|-..+.+.+.|+||.+.+.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~-~g~---~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE-LGG---NAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-cCC---eEEeHHHHHHHHhcCCEEEECCCC
Confidence            46789999995 999999999999876 5788888754333232222 121   333333333445679999998873

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.63  E-value=0.12  Score=46.90  Aligned_cols=36  Identities=25%  Similarity=0.395  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      ...||+|+|.|.+..+|+.++..|.++|++|+++..
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs  196 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHV  196 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEec
Confidence            468999999999999999999999999999998863

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.56  E-value=0.14  Score=48.27  Aligned_cols=71  Identities=23%  Similarity=0.214  Sum_probs=43.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEE-cc--cccccccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR-HD--VVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~-~D--~~~~~~~~vD~vih~Ag  189 (290)
                      .+.+|+|.|+ |.+|...+..+...|++|+++++..+...+...+. +. . .++. .+  ...+...++|++|.+.|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l-Ga-~-~~i~~~~~~~v~~~~~~~D~vid~~G  251 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL-GA-D-SFLVTTDSQKMKEAVGTMDFIIDTVS  251 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC-CC-c-EEEcCcCHHHHHHhhCCCcEEEECCC
Confidence            5779999985 99999998888888999999876533322222221 11 1 1111 11  11112236899999887

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.54  E-value=0.12  Score=49.46  Aligned_cols=67  Identities=25%  Similarity=0.236  Sum_probs=47.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+++|+|.| .|.||..++..+...|.+|++++++..+......     ..++.+..   ++.+.++|+||.+.|
T Consensus       200 l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-----~G~~~~~~---~e~v~~aDVVI~atG  266 (413)
T cd00401         200 IAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-----EGYEVMTM---EEAVKEGDIFVTTTG  266 (413)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-----cCCEEccH---HHHHcCCCEEEECCC
Confidence            5789999999 7899999999999999999999875433322211     12222221   344567899998776

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.54  E-value=0.12  Score=46.80  Aligned_cols=35  Identities=26%  Similarity=0.441  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEe
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD  147 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~  147 (290)
                      ...||+|+|.|.++.+|+.++..|.++|++|+++.
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~h  189 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICH  189 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEec
Confidence            46899999999999999999999999999999874

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.53  E-value=0.13  Score=46.96  Aligned_cols=35  Identities=29%  Similarity=0.487  Sum_probs=32.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEe
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD  147 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~  147 (290)
                      ...||+|.|.|.++.+|..++..|+++|++|+++.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~  189 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH  189 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence            46899999999999999999999999999999984

>PRK07877 hypothetical protein; Provisional

Probab=94.50  E-value=0.16  Score=51.87  Aligned_cols=101  Identities=17%  Similarity=0.113  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCC------Cc---------------hhhhhcccCCCCeEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFT------GR---------------KENVMHHFGNPNFEL  168 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~------~~---------------~~~~~~~~~~~~v~~  168 (290)
                      ..+++++|+|.|+ | +|.+++..|+..|-  +++++|...-      +.               ++.+.++...-+++.
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~  180 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV  180 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence            3466789999998 7 99999999999994  7888865410      10               001111112235666


Q ss_pred             EEcccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          169 IRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       169 ~~~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      +...++.+    .+.++|+||.|.-                 |+..=..+-++|.+.++.+|+-++.
T Consensus       181 ~~~~i~~~n~~~~l~~~DlVvD~~D-----------------~~~~R~~ln~~a~~~~iP~i~~~~~  230 (722)
T PRK07877        181 FTDGLTEDNVDAFLDGLDVVVEECD-----------------SLDVKVLLREAARARRIPVLMATSD  230 (722)
T ss_pred             EeccCCHHHHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence            66655543    3457999998763                 2222234457788888888877753

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=94.49  E-value=0.35  Score=43.41  Aligned_cols=31  Identities=26%  Similarity=0.515  Sum_probs=26.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEEe
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVD  147 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~  147 (290)
                      ++|.|.|++|.+|+.+++.+.+. +.+++++.
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~   33 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAF   33 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            58999999999999999999874 77877653

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=94.47  E-value=0.046  Score=48.82  Aligned_cols=35  Identities=29%  Similarity=0.390  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++.+|+|+|++|.+|..++..+...|.+|+++++.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~  173 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGS  173 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCC
Confidence            56799999999999999999999999999988764

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.46  E-value=0.23  Score=36.37  Aligned_cols=34  Identities=35%  Similarity=0.563  Sum_probs=29.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN  148 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r  148 (290)
                      ..+++++|.|+ |.+|..++..|.+. +.+|.+.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            56789999996 99999999999998 567777754

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PLN02928 oxidoreductase family protein

Probab=94.45  E-value=0.12  Score=48.22  Aligned_cols=77  Identities=18%  Similarity=0.183  Sum_probs=49.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCC--CCe--EEEEcccccccccCCCEEEEc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN--PNF--ELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~v--~~~~~D~~~~~~~~vD~vih~  187 (290)
                      ....+|+|.|.| .|-||+.+++.|...|.+|++.+|...............  ..+  .....+-.++.+.+.|+|+.+
T Consensus       155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            457899999999 799999999999999999999988532211110000000  000  001223345667789999977


Q ss_pred             cc
Q 022900          188 AC  189 (290)
Q Consensus       188 Ag  189 (290)
                      .-
T Consensus       234 lP  235 (347)
T PLN02928        234 CT  235 (347)
T ss_pred             CC
Confidence            64

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.45  E-value=0.06  Score=49.13  Aligned_cols=36  Identities=25%  Similarity=0.289  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+||+|.+|..++..+...|.+|++++++
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s  172 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS  172 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            356799999999999999888877789999988764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.44  E-value=0.16  Score=46.76  Aligned_cols=67  Identities=16%  Similarity=0.193  Sum_probs=47.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ...+++|.|.| .|-||+.+++.|...|.+|++.++......         ....+...+-.++.+.++|+|+.+..
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~~~~~~l~e~l~~aDvvv~~lP  199 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSFAGREELSAFLSQTRVLINLLP  199 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------CceeecccccHHHHHhcCCEEEECCC
Confidence            46789999999 999999999999999999999987431110         00111223345566778999997764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=94.43  E-value=0.051  Score=50.48  Aligned_cols=36  Identities=22%  Similarity=0.237  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+||+|.+|..++..+...|.+|++++++
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~  192 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS  192 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCC
Confidence            357899999999999999988887889999988653

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.40  E-value=0.4  Score=45.09  Aligned_cols=68  Identities=21%  Similarity=0.246  Sum_probs=40.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCe---EEEEeCCCCCchhhhhcccCCCCeEEEEcccc-cccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~---V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~vD~vih~Ag  189 (290)
                      ++|.|.||||++|..+++.++++ ...   +..++......  ... .+.+...  ...+.. .+.+.++|+++.+++
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~--~~~-~f~g~~~--~v~~~~~~~~~~~~Divf~a~~   74 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG--AAP-SFGGKEG--TLQDAFDIDALKKLDIIITCQG   74 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC--ccc-ccCCCcc--eEEecCChhHhcCCCEEEECCC
Confidence            58999999999999999855554 554   55554321111  111 1122222  222333 245678999998886

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=94.38  E-value=0.07  Score=47.76  Aligned_cols=37  Identities=30%  Similarity=0.395  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .++++|+|+|++|.+|..++..+...|.+|+++++..
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~  179 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSA  179 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3578999999999999999999999999999987743

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.35  E-value=0.12  Score=48.06  Aligned_cols=68  Identities=19%  Similarity=0.129  Sum_probs=47.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ....+|+|.|.| .|-||+.+++.|...|.+|++.+|.....  . ...   ..+.   .+-.++.+.+.|+|+.+.-
T Consensus       146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~-~~~---~~~~---~~~l~ell~~aDiV~l~lP  213 (333)
T PRK13243        146 YDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE--A-EKE---LGAE---YRPLEELLRESDFVSLHVP  213 (333)
T ss_pred             cCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh--h-HHH---cCCE---ecCHHHHHhhCCEEEEeCC
Confidence            457899999999 69999999999999999999998753211  1 100   1111   1224456678999987763

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.35  E-value=0.066  Score=46.72  Aligned_cols=35  Identities=34%  Similarity=0.448  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+|+++ +|..++..+...|.+|++++++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~  167 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRS  167 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCC
Confidence            3567999999998 9999999888899999999764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06849 hypothetical protein; Provisional

Probab=94.35  E-value=0.083  Score=49.89  Aligned_cols=35  Identities=20%  Similarity=0.337  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++|+|+|||++..+|..+++.|.+.|++|++++..
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~   37 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSL   37 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999999999999999865

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.33  E-value=0.12  Score=46.92  Aligned_cols=97  Identities=21%  Similarity=0.304  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeCCCCCchhhhhcccC----CCCeEEEEccccccc----ccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPL----LLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~----~~~vD~v  184 (290)
                      ..+.+|+|+||+|-+|+-. -++++ +|++|+++.    ..+++...+..    +..++....|+....    =+++|+.
T Consensus       149 k~GetvvVSaAaGaVGsvv-gQiAKlkG~rVVGia----Gg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvy  223 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVV-GQIAKLKGCRVVGIA----GGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVY  223 (340)
T ss_pred             CCCCEEEEEecccccchHH-HHHHHhhCCeEEEec----CCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEE
Confidence            3578999999999999855 55555 699999996    34444433322    223334333442221    2469999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCC
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDP  237 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~  237 (290)
                      |-|.|-                      .+++++...   ..||+.++-++-|+.+
T Consensus       224 feNVGg----------------------~v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         224 FENVGG----------------------EVLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             EEcCCc----------------------hHHHHHHHhhccccceeeeeehhhcCCC
Confidence            988872                      233443322   2499999999999866

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.33  E-value=0.12  Score=47.89  Aligned_cols=67  Identities=25%  Similarity=0.316  Sum_probs=46.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ...+|++.|.| .|-||+.+++.|..-|.+|++.++......+..        ......|-.++.+.+.|+|+...
T Consensus       139 el~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~--------~~~~~~~~Ld~lL~~sDiv~lh~  205 (324)
T COG0111         139 ELAGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV--------DGVVGVDSLDELLAEADILTLHL  205 (324)
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhcc--------ccceecccHHHHHhhCCEEEEcC
Confidence            46799999999 899999999999999999999998543322211        11223344555566666666443

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.29  E-value=0.15  Score=46.05  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      ..+||+|+|.|.|..+|+-++..|.++|++|+++..
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs  190 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR  190 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcC
Confidence            478999999999999999999999999999998864

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.15  E-value=0.24  Score=44.75  Aligned_cols=33  Identities=27%  Similarity=0.314  Sum_probs=30.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ++|.|.| +|.+|..++..|++.|++|++++++.
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~   36 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISD   36 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            5799998 69999999999999999999999864

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.15  E-value=0.17  Score=45.97  Aligned_cols=37  Identities=24%  Similarity=0.425  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      ...+||+|+|.|.|..+|+-++..|.++|++|+++..
T Consensus       151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs  187 (287)
T PRK14173        151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHS  187 (287)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCC
Confidence            3468999999999999999999999999999998754

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.03  E-value=0.066  Score=48.95  Aligned_cols=73  Identities=16%  Similarity=0.172  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEE-EcccccccccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI-RHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~vD~vih~A  188 (290)
                      .++++.|+|+.| +|.--++...+-|++|+++++....+++.+..+-.+.-++.. +.|..+...+-.|.++|++
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v  254 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV  254 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence            689999999888 886544444445999999998765555555444222223444 4555555555566666665

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=94.01  E-value=0.7  Score=41.23  Aligned_cols=34  Identities=18%  Similarity=0.389  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CeEEE-EeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIV-VDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G-~~V~~-~~r~  149 (290)
                      +++|.|.|++|-+|+.+++.+.+.. .++.+ ++|.
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~   37 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRP   37 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecC
Confidence            5689999999999999999999875 45443 5553

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.99  E-value=0.55  Score=43.21  Aligned_cols=88  Identities=24%  Similarity=0.309  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~  194 (290)
                      +.+|.|.||||++|..|++.|.++.. ++..+..+.  ..          ..     +..+..+.++|++|-+...    
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~--~~----------~~-----~~~~~~~~~~DvvFlalp~----   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAK--RK----------DA-----AARRELLNAADVAILCLPD----   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCC--CC----------cc-----cCchhhhcCCCEEEECCCH----
Confidence            45899999999999999999998864 455443221  10          00     1122344578999876631    


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc------cccCCC
Q 022900          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE------VYGDPL  238 (290)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~------vyg~~~  238 (290)
                                   - -...+...+.+.|+++|=.|+..      +||.+.
T Consensus        61 -------------~-~s~~~~~~~~~~g~~VIDlSadfRl~~~~~yglPE   96 (313)
T PRK11863         61 -------------D-AAREAVALIDNPATRVIDASTAHRTAPGWVYGFPE   96 (313)
T ss_pred             -------------H-HHHHHHHHHHhCCCEEEECChhhhcCCCCeEEcCc
Confidence                         0 12334455556677888888763      566543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.97  E-value=0.28  Score=44.37  Aligned_cols=34  Identities=26%  Similarity=0.333  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      ++|.|.| .|.+|..++..|++.|++|++++++.+
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQE   35 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHH
Confidence            4799999 599999999999999999999998643

>PLN02494 adenosylhomocysteinase

Probab=93.97  E-value=0.14  Score=49.59  Aligned_cols=36  Identities=31%  Similarity=0.268  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+++|+|.| .|.||+.+++.+...|.+|++++++.
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp  287 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDP  287 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            5789999999 88999999999999999999998754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.95  E-value=0.16  Score=49.13  Aligned_cols=37  Identities=30%  Similarity=0.273  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ...+++|+|.| .|.||+.+++.|...|.+|+++++..
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp  287 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDP  287 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            47899999999 77899999999999999999987653

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.95  E-value=0.16  Score=45.97  Aligned_cols=35  Identities=23%  Similarity=0.445  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV  146 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~  146 (290)
                      ....||+|.|.|.||.+|..++..|+++|++|++.
T Consensus       154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~  188 (284)
T PRK14179        154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT  188 (284)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence            34789999999999999999999999999999987

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=93.94  E-value=0.089  Score=47.76  Aligned_cols=36  Identities=33%  Similarity=0.380  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+||+|.+|..++..+...|.+|++++++
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s  177 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGS  177 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            356899999999999999888888889999988754

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.91  E-value=0.31  Score=44.49  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .++|.|.| .|.+|..++..|++.|++|++++++.
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCH
Confidence            46899998 69999999999999999999998764

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.90  E-value=0.13  Score=48.93  Aligned_cols=71  Identities=18%  Similarity=0.261  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      +++++|+|.| .|=+|.-+++.|.++|. .|+++.|...+..+...    .-..+++..|-....+.+.|+||-+.+
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~----~~~~~~~~l~el~~~l~~~DvVissTs  247 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAK----KLGAEAVALEELLEALAEADVVISSTS  247 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH----HhCCeeecHHHHHHhhhhCCEEEEecC
Confidence            5788999999 79999999999999995 67777654333333222    233677777777788889999998766

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=93.89  E-value=0.18  Score=48.81  Aligned_cols=72  Identities=17%  Similarity=0.090  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcCCchHHHH-HHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSH-LVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~-la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      .++++|+|.| -|..|.+ +++.|.++|++|++.|.......+.+    ....+.+.... ..+.+.++|.||...|+.
T Consensus         5 ~~~~~v~viG-~G~sG~s~~a~~L~~~G~~V~~~D~~~~~~~~~l----~~~gi~~~~~~-~~~~~~~~d~vv~spgi~   77 (461)
T PRK00421          5 RRIKRIHFVG-IGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRL----LELGAIIFIGH-DAENIKDADVVVYSSAIP   77 (461)
T ss_pred             CCCCEEEEEE-EchhhHHHHHHHHHhCCCeEEEECCCCChHHHHH----HHCCCEEeCCC-CHHHCCCCCEEEECCCCC
Confidence            4567899999 5679999 79999999999999987543221111    12234444322 233455799999988863

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.88  E-value=0.14  Score=46.12  Aligned_cols=33  Identities=27%  Similarity=0.356  Sum_probs=29.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.|.| .|-+|..++..|.+.|++|++++++.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~   33 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRE   33 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCH
Confidence            3688998 89999999999999999999998753

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=93.88  E-value=0.12  Score=47.78  Aligned_cols=32  Identities=22%  Similarity=0.540  Sum_probs=26.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEe
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~  147 (290)
                      +++|.|.||+|+-|.+|++.|+.+.+ +++.++
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~s   34 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILIS   34 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEee
Confidence            56899999999999999999999854 655543

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.80  E-value=0.22  Score=45.01  Aligned_cols=36  Identities=22%  Similarity=0.435  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      ..+||+|+|.|.|..+|+-++..|.++|++|+++..
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs  190 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHS  190 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence            468999999999999999999999999999998854

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=93.79  E-value=0.13  Score=44.56  Aligned_cols=73  Identities=22%  Similarity=0.274  Sum_probs=51.8

Q ss_pred             CCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEE
Q 022900          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIY  185 (290)
Q Consensus       109 p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vi  185 (290)
                      |.....++|+|+|.| +|-+|..=++.|++.|++|+++....   .+.+.......++++++.+.-.+.+.+++.||
T Consensus         5 Pl~~~l~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~---~~el~~~~~~~~i~~~~~~~~~~~~~~~~lvi   77 (210)
T COG1648           5 PLFLDLEGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEF---EPELKALIEEGKIKWIEREFDAEDLDDAFLVI   77 (210)
T ss_pred             ceEEEcCCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCc---cHHHHHHHHhcCcchhhcccChhhhcCceEEE
Confidence            344557899999999 78999999999999999999997543   44444444555666666444444455566666

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	290
4ef7_B	337	Udp-Xylose Synthase Length = 337		3e-57
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		7e-56
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		1e-17
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		9e-14
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		6e-12
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		6e-11
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		1e-10
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		6e-10
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		8e-10
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		1e-09
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		1e-09
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		1e-09
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		1e-09
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-09
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		2e-09
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		2e-09
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-09
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-09
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		2e-09
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-09
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		3e-09
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-09
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		4e-09
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		2e-08
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		2e-08
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-08
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		4e-08
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		5e-08
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		6e-08
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		1e-07
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		2e-07
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-07
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-07
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-07
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		3e-07
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		3e-07
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		3e-07
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		3e-07
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		4e-07
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		5e-07
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		8e-07
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		1e-06
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		1e-06
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		1e-06
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		2e-06
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		2e-06
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		2e-06
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		4e-06
3slg_A	372	Crystal Structure Of Pbgp3 Protein From Burkholderi		6e-06
1wvg_A	359	Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal		1e-05
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		3e-05
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		7e-05
2c5e_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		3e-04
2c54_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		3e-04
2c59_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		3e-04
2c5a_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		3e-04

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score =  213 bits (543), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 101/137 (73%), Positives = 112/137 (81%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L   G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 29  RILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 88
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLN LGLAKRVGAR LL STSEVYGDP
Sbjct: 89  YIEVDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAKRVGARLLLASTSEVYGDP 148
Query: 238 LQHPQKETYWGNVNPIG 254
             HPQ E YWG+VNPIG
Sbjct: 149 EVHPQSEDYWGHVNPIG 165

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 15/146 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +RIVVTGGAGF+GSHLVD+L+  G  V+VVDN  +GR+E     F NP+ EL   D+ + 
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-----FVNPSAELHVRDLKDY 55
Query: 177 LL---LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSE 232
                ++ D ++H A           P+     NVV T N+L  A++ G R  +  S+S 
Sbjct: 56  SWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 115
Query: 233 VYGDP--LQHPQKETYWGNVNPIGTY 256
           VYGD   +  P++E Y     PI  Y
Sbjct: 116 VYGDADVIPTPEEEPY----KPISVY 137

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV----V 174
           IVVTGGAGF+GSH+VD+L +  + ++V+DN  +G +E     F N    L++ D+    +
Sbjct: 4   IVVTGGAGFIGSHVVDKL-SESNEIVVIDNLSSGNEE-----FVNEAARLVKADLAADDI 57
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEV 233
           +  L   ++++H+A          NP +  + NV+ T  +L   ++ G +R + TSTS V
Sbjct: 58  KDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTV 117
Query: 234 YGDPLQHPQKETYWGNVNPIGTY 256
           YG+    P  E Y    +PI  Y
Sbjct: 118 YGEAKVIPTPEDY--PTHPISLY 138

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 19/146 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +RIVVTGGAGF+GSHLVD+L+  G  V+VVD         ++      + EL   D+ + 
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVD---------IVQRDTGGSAELHVRDLKDY 51
Query: 177 LL---LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSE 232
                ++ D ++H A           P+     NVV T N+L  A++ G R  +  S+S 
Sbjct: 52  SWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 111
Query: 233 VYGDP--LQHPQKETYWGNVNPIGTY 256
           VYGD   +  P++E Y     PI  Y
Sbjct: 112 VYGDADVIPTPEEEPY----KPISVY 133

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Query: 106 GKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN 165
           G +P G   K  ++ +TG  G +GSH+ + L+ RGD V+ +DNF TGR+E++  H   PN
Sbjct: 13  GLVPRGSHMK--KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH---PN 67
Query: 166 FELIR-----HDVVEPLL--LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
              +      H +V  L+  L+ D + H A         +N      TN VG  N++  A
Sbjct: 68  LTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYN---DTLTNCVGGSNVVQAA 124
Query: 219 KRVG-ARFLLTSTSEVYG-DPLQHP 241
           K+    RF+   T+  YG  P+Q P
Sbjct: 125 KKNNVGRFVYFQTALCYGVKPIQQP 149

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 10/138 (7%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDV--- 173
           ++++TGG GF+GS+L    +++G  +IV DN       + +H   +  NFE +  D+   
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62
Query: 174 --VEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLL 227
             V  L+ +   D  +HLA   +      NP    + NV GTLN+L   ++  +    + 
Sbjct: 63  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 122
Query: 228 TSTSEVYGDPLQHPQKET 245
           +ST++VYGD  Q+   ET
Sbjct: 123 SSTNKVYGDLEQYKYNET 140

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIAR------GDSVIVVDNF-FTGRKENVMHHFGNPNFELI 169
           +R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 170 RHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A 223
             D+ +  LL      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 224 RFLLTSTSEVYG 235
           R +  ST EVYG
Sbjct: 121 RVVHVSTDEVYG 132

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +ST+ VYGD  + P  E++     P GT
Sbjct: 121 FSSTATVYGDNPKIPYVESF-----PTGT 144

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-------HHFGNPNFELIRH 171
           ++VTGGAG++GSH V  LI  G   +V DN      ++V        HH      +L   
Sbjct: 14  VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 73
Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
             +E +  E  +D + H A   +       P++    N++GT+ +L L ++   ++F+ +
Sbjct: 74  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 133
Query: 229 STSEVYGDPLQHPQ-----KETYWGNVNPIGTYXXXXXXXXXXXXXXXRPSRKACRFFIL 283
           S++ VYGD  + P      +E   G  NP   Y                  +K+ +F IL
Sbjct: 134 SSATVYGDATRFPNMIPIPEECPLGPTNP---YGHTKYAIENILNDLYNSDKKSWKFAIL 190
Query: 284 LYRN 287
            Y N
Sbjct: 191 RYFN 194

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF--ELIRHDVV 174
           +R++VTGGAGF+GSH+V+ L+ARG  V V+DN  TG++ENV    G P F  +L   + V
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPK--GVPFFRVDLRDKEGV 58
Query: 175 EPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS- 231
           E    E     + H A  AS      +PV   + N++G LN+L   ++ G   L+ +++ 
Sbjct: 59  ERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTG 118
Query: 232 -EVYGDPLQHPQKETYW 247
             +YG+  +  + E  W
Sbjct: 119 GAIYGEVPEGERAEETW 135

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIAR------GDSVIVVDNF-FTGRKENVMHHFGNPNFELI 169
           +R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 170 RHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A 223
             D+ +  LL      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 224 RFLLTSTSEVYG 235
           R +  ST++VYG
Sbjct: 121 RVVHVSTNQVYG 132

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S++ VYGD  + P  E++     P GT
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGT 144

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S++ VYGD  + P  E++     P GT
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGT 144

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S++ VYGD  + P  E++     P GT
Sbjct: 121 FSSSATVYGDNPKIPYVESF-----PTGT 144

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S++ VYGD  + P  E++     P GT
Sbjct: 121 FSSSATVYGDNPKIPYVESF-----PTGT 144

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S + VYGD  + P  E++     P GT
Sbjct: 121 FSSAATVYGDQPKIPYVESF-----PTGT 144

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNF-FTGRKENVMHHFGNPNFELIRHDV- 173
            I+VTGGAGF+GS+ V  +      V   V+D   + G K N+    G+   EL+  D+ 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGD-RVELVVGDIA 64
Query: 174 ----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
               V+ L  + D I H A  +   +   +P   I TN +GT  +L  A++   RF   S
Sbjct: 65  DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 124
Query: 230 TSEVYGD-PLQ 239
           T EVYGD PL+
Sbjct: 125 TDEVYGDLPLR 135

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S + VYGD  + P  E++     P GT
Sbjct: 121 FSSAATVYGDQPKIPYVESF-----PTGT 144

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S + VYGD  + P  E++     P GT
Sbjct: 121 FSSAATVYGDNPKIPYVESF-----PTGT 144

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S + VYGD  + P  E++     P GT
Sbjct: 121 FSSAATVYGDNPKIPYVESF-----PTGT 144

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
            +S + VYGD  + P  E++     P GT
Sbjct: 121 FSSVATVYGDNPKIPYVESF-----PTGT 144

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +RI++TGGAG +GS+L++  + +G  ++V+DNF TG++E +    G     +I   V + 
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAG---LSVIEGSVTDA 77
Query: 177 LLLEVDQIYHLACPASPVH----YKFNP---VKTIKTNVVGTLNMLGLAKRVGARFLLT- 228
            LLE  + +    P   VH    YK +P    +   TNV G++N+   A + G + LL  
Sbjct: 78  GLLE--RAFDSFKPTHVVHSAAAYK-DPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134
Query: 229 STSEVYGDPLQHP 241
            T+  YG P   P
Sbjct: 135 QTALCYGRPATVP 147

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L++ L+     V+ +DNF TG + N      ++      NF+ I+ D+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                       VD + H A   S      +P+ +  TN+ G LNML  A+    + F  
Sbjct: 91  RNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTY 150
Query: 228 TSTSEVYGDPLQHPQKETYWG 248
            ++S  YGD    P+ E   G
Sbjct: 151 AASSSTYGDHPGLPKVEDTIG 171

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHD 172
            ++++VTGG GF+GS+ +  ++ +     VI +D    G    N+     +P +  ++ D
Sbjct: 3   SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGD 62
Query: 173 V-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARF 225
           V     V+ L+ +VD + HLA  +       +P   + +NV+GT  +L   +R     RF
Sbjct: 63  VADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRF 122
Query: 226 LLTSTSEVYGDPLQ 239
           +  ST EVYGD L+
Sbjct: 123 VHVSTDEVYGDILK 136

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 20/146 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           ++I++TGGAGF+GS +V  +I    D+V+ +D   + G  E++     +  +     D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 175 EPLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---- 223
           +   +       + D + HLA  +        P   I+TN+VGT  +L +A++  +    
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 224 ------RFLLTSTSEVYGDPLQHPQK 243
                 RF   ST EVYGD L HP +
Sbjct: 121 DKKNNFRFHHISTDEVYGD-LPHPDE 145

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I++ GGAG++GSH V +L+  G SV+VVDN  TG ++ +       N +L     +  + 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF 63
Query: 179 LE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 235
            +  ++ + H A  +        P++    NV G L +L +       +F+ +ST+  YG
Sbjct: 64  TQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYG 123
Query: 236 D-PLQHPQKETYWGNVNPIGTY 256
           +  +    +ET     NP  TY
Sbjct: 124 EVDVDLITEETM---TNPTNTY 142

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---RKENVMHHFGNPNFELIRHDVV 174
           RI++TGGAGF+G HL   L+A G+ V V+D+         E        P  EL   D  
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERD-- 66
Query: 175 EPLLLEVDQIYHLACPAS-PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
              L +V  +YHLA   S P  +K  P+  +  NV    ++L L   VG  + ++ ST E
Sbjct: 67  ---LSDVRLVYHLASHKSVPRSFK-QPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCE 121
Query: 233 VYG--DPLQHPQK 243
           VYG  D L  P+ 
Sbjct: 122 VYGQADTLPTPED 134

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
           +I++TGGAGF+GS LV  +I    D+V+VVD   + G   ++     +  F   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 176 PLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA---------- 218
              L       + D + HLA  +        P   I+TN+VGT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 219 KRVGARFLLTSTSEVYGD 236
           K+   RF   ST EVYGD
Sbjct: 123 KKSAFRFHHISTDEVYGD 140

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 106 GKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF----FTGRKENVMHHF 161
           G   L  +     I+VTGGAGF+GS+ V   +   ++  ++ NF    ++G   NV    
Sbjct: 14  GTENLYFQSNAXNILVTGGAGFIGSNFVHYXLQSYETYKII-NFDALTYSGNLNNVKSIQ 72
Query: 162 GNPNFELIRHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNM 214
            +PN+  ++ ++    LLE       V  I + A  +       NP+    TNV+GT+ +
Sbjct: 73  DHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTL 132
Query: 215 LGLAKRV-GARFLLTSTSEVYG 235
           L L K+    + +  ST EVYG
Sbjct: 133 LELVKKYPHIKLVQVSTDEVYG 154

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 101
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 102 RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 161
Query: 228 TSTSEVYGDPLQHPQKETYWGN 249
            ++S  YGD    P+ E   GN
Sbjct: 162 AASSSTYGDHPALPKVEENIGN 183

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 88
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 89  RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 148
Query: 228 TSTSEVYGDPLQHPQKETYWGN 249
            ++S  YGD    P+ E   GN
Sbjct: 149 AASSSTYGDHPALPKVEENIGN 170

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 88
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 89  RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 148
Query: 228 TSTSEVYGDPLQHPQKETYWGN 249
            ++S  YGD    P+ E   GN
Sbjct: 149 AASSSTYGDHPALPKVEENIGN 170

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 82
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 83  RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 142
Query: 228 TSTSEVYGDPLQHPQKETYWGN 249
            ++S  YGD    P+ E   GN
Sbjct: 143 AASSSTYGDHPALPKVEENIGN 164

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYG 235
            +   R +  STSEVYG
Sbjct: 119 VKYRKRIIFPSTSEVYG 135

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
           +R ++TG AGFVG +L + L  +      V+ F T R          PN E+I  D+   
Sbjct: 13  MRALITGVAGFVGKYLANHLTEQN-----VEVFGTSRNNEAKL----PNVEMISLDIMDS 63
Query: 174 --VEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK--RVGARFLL 227
             V+ ++ ++  D I+HLA  +S      N   T  TNV GTL++L   +   +  R L 
Sbjct: 64  QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 123
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
             +SE YG  L      +    + P+  Y
Sbjct: 124 IGSSEEYGMILPEESPVSEENQLRPMSPY 152

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYG 235
            +   R +  STSEVYG
Sbjct: 119 VKYRKRIIFPSTSEVYG 135

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYG 235
            +   R +  STSEVYG
Sbjct: 119 VKYRKRIIFPSTSEVYG 135

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYG 235
            +   R +  STSEVYG
Sbjct: 119 VKYRKRIIFPSTSEVYG 135

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFEL 168
           P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P+F  
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---PHFHF 364
Query: 169 IRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
           +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +  
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 223 ARFLLTSTSEVYG 235
            R +  STSEVYG
Sbjct: 425 KRIIFPSTSEVYG 437

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYG 235
            +   R +  ST+EVYG
Sbjct: 119 VKYRKRIIFPSTAEVYG 135

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 100 GAVNSGGKIPLGLKRKGL---RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKE 155
           G V  G  +P+ +    L    ++V GGAGFVGS+LV RL+  G + V VVDN  +  K 
Sbjct: 13  GLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI 72
Query: 156 NVMHHFGNPNFELIRHDVVEPLLL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVG 210
           NV  H   P        + +  LL     E D ++HLA          +P+   + N + 
Sbjct: 73  NVPDH---PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLT 129
Query: 211 TLNM 214
           TL +
Sbjct: 130 TLKL 133

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 119 IVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-----FTGRKENVMHHFGNP---NFEL 168
           I++TGGAGFVGS+L            V+V+D F     F+  + + + HF N      E+
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72
Query: 169 IRHDVVEPL------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
           I  D+  PL       L  D ++H A  +       N    +KTN    LN+L +A+   
Sbjct: 73  IAADINNPLDLRRLEKLHFDYLFHQAAVSDTT--MLNQELVMKTNYQAFLNLLEIARSKK 130
Query: 223 ARFLLTSTSEVYGD 236
           A+ +  S++ VYG+
Sbjct: 131 AKVIYASSAGVYGN 144

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
           +R+++ G  GF+G+HL +RL+      +   +  +      ++H   P+F  +  D+   
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---PHFHFVEGDISIH 57
Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  ST
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 117
Query: 231 SEVYG 235
           SEVYG
Sbjct: 118 SEVYG 122

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +      E++  +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLL-TSTSEVYGDPLQHPQKETY--WGNVNPIG 254
            + L+ +S++ VYG+P   P  E +   G  NP G
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +      E++  +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLL-TSTSEVYGDPLQHPQKETY--WGNVNPIG 254
            + L+ +S++ VYG+P   P  E +   G  NP G
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +      E++  +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLL-TSTSEVYGDPLQHPQKETY--WGNVNPIG 254
            + L+ +S++ VYG+P   P  E +   G  NP G
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 23/146 (15%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENVMH--HFGNPNFELIRHDV 173
           ++TG  G  GS+L + L+ +G  V  +     +F T R +++    H  NP F L   D+
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64
Query: 174 VEP-----LLLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML------GLAK 219
            +      +L EV  D++Y+L    S V   F +P  T   + +GTL +L      GL K
Sbjct: 65  SDTSNLTRILREVQPDEVYNLGA-MSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123
Query: 220 RVGARFLLTSTSEVYGDPLQHPQKET 245
           +   RF   STSE+YG   + PQKET
Sbjct: 124 KT--RFYQASTSELYGLVQEIPQKET 147

>pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 99  FGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM 158
            G + +  + P  +K K  ++++ G  GF+G HL  R++   D  +   +  T R  +++
Sbjct: 9   MGTLEAQTQGPGSMKAK--KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV 66
Query: 159 HHFGNPNFE---LIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML 215
            H     FE    I  + VE  + + D I  L   A+P  Y   P++  + +    L ++
Sbjct: 67  KHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIV 126
Query: 216 GLAKRVGARFLLTSTSEVYG 235
             A + G   +  STSEVYG
Sbjct: 127 RSAVKYGKHLVFPSTSEVYG 146

>pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 23/156 (14%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG--------DSVIVVDNFFTGRKENVMH-HFGN-P 164
           +G R+ VTG  GF GS L   L   G        D+  V   F   R  ++M  H G+  
Sbjct: 8   QGKRVFVTGHTGFKGSWLSLWLTEMGAIVKGYALDAPTVPSLFEIVRLNDLMESHIGDIR 67
Query: 165 NFELIRHDVVEPLLLEVDQIYHLAC-PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
           +FE +R  + E    + + ++H+A  P   + Y+  P+KT  TNV+GT+++L   K+VG 
Sbjct: 68  DFEKLRSSIAE---FKPEIVFHMAAQPLVRLSYE-QPIKTYSTNVMGTVHLLETVKQVGN 123
Query: 224 -RFLLTSTSEVYGDPLQHPQKETYWG--NVNPIGTY 256
            + ++  TS+   D      +E  WG     P+G Y
Sbjct: 124 IKAVVNITSDKCYD-----NREWVWGYRENEPMGGY 154

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVEP 176
           I+VTGGAG++GSH    L+A G  V++ DN    ++E +  +             DV + 
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE 67
Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG------------LAKRVGAR 224
             L   +I+      + +H  F  +K +  +V   +                + +R   R
Sbjct: 68  RALA--RIFDAHPITAAIH--FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKR 123
Query: 225 FLLTSTSEVYGDPLQHPQKETY-WGNVNPIG 254
            + +S++ VYG P + P  ET+     NP G
Sbjct: 124 IVFSSSATVYGVPERSPIDETFPLSATNPYG 154

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENVMHHFGNP------NFELI 169
           ++TG  G  GS+L + L+ +G  V  +     +F TGR E   H + NP      N +L 
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIE---HLYKNPQAHIEGNMKLH 84
Query: 170 RHDVVEPLLL-----EVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAKRV 221
             D+ +   L     EV   +IY+L    S V   F+  + T   + VGTL +L   K  
Sbjct: 85  YGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAVKTC 143
Query: 222 G----ARFLLTSTSEVYGDPLQHPQKET 245
           G     +F   STSE+YG   + PQKET
Sbjct: 144 GLINSVKFYQASTSELYGKVQEIPQKET 171

>pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVY 234
           ++ +Y
Sbjct: 145 SACIY 149

>pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVY 234
           ++ +Y
Sbjct: 145 SACIY 149

>pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVY 234
           ++ +Y
Sbjct: 145 SACIY 149

>pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVY 234
           ++ +Y
Sbjct: 145 SACIY 149

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	290
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-94
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	3e-80
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-70
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	8e-65
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-58
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	4e-55
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-39
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	7e-39
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	9e-38
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-36
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-36
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-33
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-32
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-32
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-32
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	3e-30
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-29
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-29
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-29
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-28
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	7e-27
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	8e-27
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-26
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	6e-26
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	1e-22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-21
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	4e-20
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	9e-20
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	1e-19
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-18
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	2e-18
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	1e-16
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	3e-15
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	4e-14
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	7e-14
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	7e-13
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	2e-12
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	3e-12
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	4e-12
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	6e-12
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-11
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	1e-11
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-11
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-10
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-10
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	3e-10
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	2e-09
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	5e-09
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-09
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	8e-09
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	9e-09
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	1e-08
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-08
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	5e-08
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	9e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-07
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	3e-07
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	8e-07
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	7e-06
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-05
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	9e-05
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-04
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	6e-04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	6e-04

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  281 bits (721), Expect = 2e-94
 Identities = 105/164 (64%), Positives = 122/164 (74%), Gaps = 4/164 (2%)

Query: 96  RVGFGAVNSGGKIPL----GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT 151
                  +S G+  L     +++   RI++TGGAGFVGSHL D+L+  G  V VVDNFFT
Sbjct: 3   SSHHHHHHSSGRENLYFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT 62

Query: 152 GRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGT 211
           GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GT
Sbjct: 63  GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 122

Query: 212 LNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT 255
           LNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG 
Sbjct: 123 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP 166

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  246 bits (630), Expect = 3e-80
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 15/172 (8%)

Query: 92  AYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT 151
           A++     G + +  + P  +K K  ++++ G  GF+G HL  R++   D  +   +  T
Sbjct: 2   AHHHHHHMGTLEAQTQGPGSMKAK--KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT 59

Query: 152 GRKENVMHHFGNPNFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIK 205
            R  +++ H           D+      VE  + + D I  L   A+P  Y   P++  +
Sbjct: 60  DRLGDLVKH---ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFE 116

Query: 206 TNVVGTLNMLGLAKRVGARFLLTSTSEVYG---DPLQHPQKETY-WGNVNPI 253
            +    L ++  A + G   +  STSEVYG   D    P      +G +N  
Sbjct: 117 LDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP 168

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  243 bits (623), Expect = 1e-79
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 12/146 (8%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-- 173
           +R+++ G  GF+G+HL +RL+      V  +D       + +     +P+F  +  D+  
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 174 ----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
               +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 230 TSEVYGDPLQHPQKETYWG-NVNPIG 254
           TSEVYG        E +    V P+ 
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVN 142

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  222 bits (567), Expect = 1e-70
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV 173
            + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V
Sbjct: 27  SENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRV 83

Query: 174 VE---PLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
           +E    +   VD +++LA     + +   N    +  N + + NM+  A+  G  RF   
Sbjct: 84  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYA 143

Query: 229 STSEVYGDPLQHPQKETY--WGNVNPIGT 255
           S++ +Y +  Q           +  P   
Sbjct: 144 SSACIYPEFKQLETTNVSLKESDAWPAEP 172

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  206 bits (527), Expect = 8e-65
 Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 15/167 (8%)

Query: 100 GAVNSGGKIPLGLKRKGL---RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKE 155
           G V  G  +P+ +    L    ++V GGAGFVGS+LV RL+  G + V VVDN  +  K 
Sbjct: 13  GLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI 72

Query: 156 NVMHHFGNPNFELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVG 210
           NV  H   P        +     +  L  E D ++HLA          +P+   + N + 
Sbjct: 73  NVPDH---PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLT 129

Query: 211 TLNMLGLAKRVGA--RFLLTSTSEVYGD-PLQHPQKETYWGNVNPIG 254
           TL +    K      + + ++      +      +       V+   
Sbjct: 130 TLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHN 176

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  188 bits (481), Expect = 2e-58
 Identities = 44/175 (25%), Positives = 65/175 (37%), Gaps = 29/175 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVV 174
           RI++TGGAGF+G HL   L+A G+ V V+D+                  P  EL   D+ 
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS 68

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
                +V  +YHLA   S       P+  +  NV    ++L L   VG  + ++ ST EV
Sbjct: 69  -----DVRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGSTCEV 122

Query: 234 YGDPLQHPQKETYWGNVNPIG-------------TYFFSFSLIF-LVFISQFRPS 274
           YG     P  E      +P+                  +         +   R  
Sbjct: 123 YGQADTLPTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFF 172

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  179 bits (457), Expect = 4e-55
 Identities = 55/143 (38%), Positives = 72/143 (50%), Gaps = 11/143 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RIVVTGGAGF+GSHLVD+L+  G  V+VVDN  +GR+E V     NP+ EL   D+ +  
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS 56

Query: 178 LLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
                  D ++H A           P+     NVV T N+L  A++ G    +  S+S V
Sbjct: 57  WGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTV 116

Query: 234 YGDPLQHPQKETYWGNVNPIGTY 256
           YGD    P  E       PI  Y
Sbjct: 117 YGDADVIPTPEEE--PYKPISVY 137

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  140 bits (354), Expect = 2e-39
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 14/157 (8%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPN 165
           L  +    ++TG AGF+GS+L++ L+     V+ +DNF TG + N+             N
Sbjct: 23  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 82

Query: 166 FELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR 220
           F+ I+ D+            VD + H A   S      +P+ +  TN+ G LNML  A+ 
Sbjct: 83  FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 142

Query: 221 VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
                F   ++S  YGD    P+ E   G   P+  Y
Sbjct: 143 AKVQSFTYAASSSTYGDHPGLPKVEDTIG--KPLSPY 177

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  137 bits (348), Expect = 7e-39
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 17/137 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I VTGG GF+G ++V+ +   G++ I++      +  N        ++E    D     
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAIN--------DYEYRVSDYTLED 55

Query: 178 LLE----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSE 232
           L+     VD + HLA            +     N + T N+         +  +  ST  
Sbjct: 56  LINQLNDVDAVVHLAATRG-SQG---KISEFHDNEILTQNLYDACYENNISNIVYASTIS 111

Query: 233 VYGDPLQHPQKETYWGN 249
            Y D    P  E     
Sbjct: 112 AYSDETSLPWNEKELPL 128

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  134 bits (340), Expect = 9e-38
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 21/148 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            IVVTGGAGF+GSH+VD+L    + ++V+DN  +G +E V     N    L++ D+    
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFV-----NEAARLVKADLAADD 56

Query: 178 LLE----VDQIYHLAC----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
           + +     ++++H+A              NP +  + NV+ T  +L   ++ G  R + T
Sbjct: 57  IKDYLKGAEEVWHIAANPDVRIGAE----NPDEIYRNNVLATYRLLEAMRKAGVSRIVFT 112

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGTY 256
           STS VYG+    P  E Y    +PI  Y
Sbjct: 113 STSTVYGEAKVIPTPEDY--PTHPISLY 138

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  131 bits (333), Expect = 2e-36
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 104 SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN 163
           S G +P G   K  ++ +TG  G +GSH+ + L+ RGD V+ +DNF TGR+E++  H   
Sbjct: 11  SSGLVPRGSHMK--KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--- 65

Query: 164 PNFELIRHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG 216
           PN   +   + +  L+         D + H A          +      TN VG  N++ 
Sbjct: 66  PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPD---DWYNDTLTNCVGGSNVVQ 122

Query: 217 LAKRVGA-RFLLTSTSEVYGD-PLQHPQKETYWGNVNPIGT 255
            AK+    RF+   T+  YG  P+Q P +  +    NP  +
Sbjct: 123 AAKKNNVGRFVYFQTALCYGVKPIQQPVRLDH--PRNPANS 161

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  131 bits (332), Expect = 4e-36
 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPN 165
           L       ++TG AGF+GS+L+++L+     VI +DNF TG + N+              
Sbjct: 21  LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSR 80

Query: 166 FELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAK 219
           F  I  D+      E ++  VD + H A   S V     +P+ T  TN+ G LN+L  AK
Sbjct: 81  FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGS-VPRSIVDPITTNATNITGFLNILHAAK 139

Query: 220 RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
                 F   ++S  YGD    P+ E   G  NP+  Y
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIG--NPLSPY 175

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  123 bits (310), Expect = 5e-33
 Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 14/176 (7%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDV 173
           +G  I+VTGGAGF+GS++V  L  +G + ++VVDN   G K   +    N    + + D 
Sbjct: 45  EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDF 103

Query: 174 VEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           +  ++       V+ I+H    +S   +    +  +  N   +  +L         FL  
Sbjct: 104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLYA 161

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGTYFFS---FSLIFLVFISQFRPSRKACRFF 281
           S++  YG       +        P+  + +S   F       + +        R+F
Sbjct: 162 SSAATYGGRTSDFIESRE--YEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYF 215

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  121 bits (305), Expect = 1e-32
 Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTGGAGF+GS++V  L  +G + ++VVDN   G K   +    N    + + D +  +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
           +       V+ I+H    +S   +    +  +  N   +  +L         FL  S++ 
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLYASSAA 118

Query: 233 VYGDPLQHPQKETYWGNVNPIGTYFFS---FSLIFLVFISQFRPSRKACRFF 281
            YG       +        P+  Y +S   F       + +        R+F
Sbjct: 119 TYGGRTSDFIESR--EYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYF 168

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  122 bits (307), Expect = 1e-32
 Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 23/162 (14%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDS--VIVVDNFFTGRKENVMH--------HFGNP 164
           +   I++TGGAGFVGS+L            V+V+D F +    +           +    
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 165 NFELIRHDVVEPLLLE------VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGL 217
             E+I  D+  PL L        D ++H  A   + +    N    +KTN    LN+L +
Sbjct: 69  KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTML---NQELVMKTNYQAFLNLLEI 125

Query: 218 AKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFS 259
           A+   A+ +  S++ VYG+  + P       N +P   Y FS
Sbjct: 126 ARSKKAKVIYASSAGVYGNT-KAPNVVGK--NESPENVYGFS 164

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  119 bits (300), Expect = 2e-32
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 21/146 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           R++VTG AG VGS +   L      V + D    G  E         + E++  D+    
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEA--------HEEIVACDLADAQ 55

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPV-KTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
            V  L+ + D I HL   +        P    ++ N++G  N+   A+ +G  R +  S+
Sbjct: 56  AVHDLVKDCDGIIHLGGVSVE-----RPWNDILQANIIGAYNLYEAARNLGKPRIVFASS 110

Query: 231 SEVYGDPLQHPQKETYWGNVNPIGTY 256
           +   G   +  + +T      P   Y
Sbjct: 111 NHTIGYYPRTTRIDTEVP-RRPDSLY 135

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  115 bits (290), Expect = 3e-30
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 27/166 (16%)

Query: 103 NSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG 162
           +S G +P G     +RI++TGGAG +GS+L++  + +G  ++V+DNF TG++E +     
Sbjct: 10  HSSGLVPRG---SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-- 64

Query: 163 NPNFELIRHDVVEPLLLE-------VDQIYHLA----CPASPVHYKFNPVKTIKTNVVGT 211
                +I   V +  LLE          + H A     P               TNV G+
Sbjct: 65  -AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED-------AATNVQGS 116

Query: 212 LNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
           +N+   A + G  R L   T+  YG P   P          P  +Y
Sbjct: 117 INVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDS--PTAPFTSY 160

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  112 bits (284), Expect = 1e-29
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 25/153 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           R++VTGGAGF+GSH+V+ L+ARG  V V+DN  TG++ENV            R D+ +  
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKE 56

Query: 178 LLE-------VDQIYHLAC----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
            +E          + H A       S V    +PV   + N++G LN+L   ++ G  + 
Sbjct: 57  GVERAFREFRPTHVSHQAAQASVKVS-VE---DPVLDFEVNLLGGLNLLEACRQYGVEKL 112

Query: 226 LLTSTSE-VYGD-PLQHPQKETYWGNVNPIGTY 256
           +  ST   +YG+ P     +ET+     P   Y
Sbjct: 113 VFASTGGAIYGEVPEGERAEETW--PPRPKSPY 143

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score =  116 bits (292), Expect = 2e-29
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 12/154 (7%)

Query: 109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFE 167
           P    R+  R+++ G  GF+G+HL +RL+      V  +D       + +     +P+F 
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFH 363

Query: 168 LIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV 221
            +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++    + 
Sbjct: 364 FVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY 423

Query: 222 GARFLLTSTSEVYGDPLQHPQKETYWGNV-NPIG 254
             R +  STSEVYG        E +   +  P+ 
Sbjct: 424 RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN 457

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score =  113 bits (284), Expect = 2e-29
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 24/121 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
            IV+TG  GFVG +L   L +  D  +  V                       + + +E 
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELES 42

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
            LL+ D I HLA    P     +  +    NV    ++L +  R   +  +  +S +   
Sbjct: 43  ALLKADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQAT 98

Query: 237 P 237
            
Sbjct: 99  Q 99

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  110 bits (278), Expect = 2e-28
 Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 27/164 (16%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARG-------DSVIVVDNFFTGRKENVMHHFGNP 164
           L  +G+ I + G AG VG  L  RL+  G       +   ++D F             + 
Sbjct: 10  LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-----SG 64

Query: 165 NFELIRHDVVEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
             +    D+  P   E       D I+HLA   S      +  K  + N+ GT  +    
Sbjct: 65  AVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAEL-DFDKGYRINLDGTRYLFDAI 123

Query: 219 KRVGA------RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
           +          R + TS+  V+G PL +P  + +     P+ +Y
Sbjct: 124 RIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH--TTPLTSY 165

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  104 bits (262), Expect = 7e-27
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 21/146 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           R++VTG AG +G  + +RL    + + + D         +      PN E ++ D+    
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADL------SPLDPA--GPNEECVQCDLADAN 56

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            V  ++   D I HL      V   F  +  ++ N++G  N+   A+  G  R +  S++
Sbjct: 57  AVNAMVAGCDGIVHLG--GISVEKPFEQI--LQGNIIGLYNLYEAARAHGQPRIVFASSN 112

Query: 232 EVYGD-PLQHPQKETYWGNVNPIGTY 256
              G  P              P G Y
Sbjct: 113 HTIGYYPQTERLGPDVP--ARPDGLY 136

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  105 bits (264), Expect = 8e-27
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 16/136 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +I++ G  G +G+ L  +L    G   ++  +      + V       +      + ++ 
Sbjct: 4   KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV------NSGPFEVVNALDF 57

Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
             +E       +  IY +A   S    + NP      N+    ++L LAK     +    
Sbjct: 58  NQIEHLVEVHKITDIYLMAALLS-ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP 116

Query: 229 STSEVYGDPLQHPQKE 244
           S+  V+G         
Sbjct: 117 SSIAVFGPTTPKENTP 132

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  105 bits (263), Expect = 1e-26
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 19/135 (14%)

Query: 119 IVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTG +G +G+ LV  L  + G   ++  +                  + I  DV    
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD---------TGGIKFITLDVSNRD 52

Query: 178 LLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
            ++       +D I+HLA   S    + +P    K N+ GT N+L  AK+    + ++ S
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILS-AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPS 111

Query: 230 TSEVYGDPLQHPQKE 244
           T  V+G      +  
Sbjct: 112 TIGVFGPETPKNKVP 126

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  103 bits (260), Expect = 6e-26
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDV--- 173
           ++++TGG GF+GS+L    +++G  +IV DN    G  +N+       NFE +  D+   
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62

Query: 174 --VEPLLLE--VDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR--VGAR 224
             V  L+ +   D  +HL   A  V       NP    + NV GTLN+L   ++      
Sbjct: 63  NDVTRLITKYMPDSCFHL---AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 119

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFS 259
            + +ST++VYGD  Q+   ET            + 
Sbjct: 120 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 154

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 95.2 bits (237), Expect = 1e-22
 Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 35/166 (21%)

Query: 113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-------------- 158
              G R++V GG G+ G      L  +   V +VDN      ++ +              
Sbjct: 8   HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDR 67

Query: 159 ----HHFGNPNFELIRHDVVEPLLLE-------VDQIYHLACPASP-----VHYKFNPVK 202
                     + EL   D+ +   L         D + H            +  +   V 
Sbjct: 68  ISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFG--EQRSAPYSMIDRSRAVY 125

Query: 203 TIKTNVVGTLNMLGLAKR--VGARFLLTSTSEVYGDPLQHPQKETY 246
           T   NV+GTLN+L   K        +   T   YG P     +E Y
Sbjct: 126 TQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP-NIDIEEGY 170

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 91.2 bits (227), Expect = 2e-21
 Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 14/142 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +  V G  G +G H    + A G  +++       R  + +        E    ++++  
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVL-----IHRPSSQIQRLAYLEPECRVAEMLDHA 69

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            LE     +D +   A             + + + +  T        +    R L   ++
Sbjct: 70  GLERALRGLDGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSA 127

Query: 232 EVYG-DPLQHPQKETYWGNVNP 252
                 P   P  E  + +  P
Sbjct: 128 YAMPRHPQGLPGHEGLFYDSLP 149

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 87.6 bits (218), Expect = 4e-20
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 23/137 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG------DSVIVVDNF-FTGRKENVMHHFGNPNFELIR 170
           R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    + 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 171 HDV-----VEPLLLEVDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNMLGLAKR 220
            D+     +   L  VD I H A  A S V              +TNV GT  +L  A  
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFA--AESHVDRSIA---GASVFTETNVQGTQTLLQCAVD 116

Query: 221 VGA-RFLLTSTSEVYGD 236
            G  R +  ST++VYG 
Sbjct: 117 AGVGRVVHVSTNQVYGS 133

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 86.8 bits (216), Expect = 9e-20
 Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 20/145 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV- 173
            I+VTGGAGF+GS+ V  +        V V+D   + G K N+         EL+  D+ 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIA 64

Query: 174 ----VEPLLLEVDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
               V+ L  + D I H A  A S      +   +P   I TN +GT  +L  A++   R
Sbjct: 65  DAELVDKLAAKADAIVHYA--AESHNDNSLN---DPSPFIHTNFIGTYTLLEAARKYDIR 119

Query: 225 FLLTSTSEVYGD-PLQHPQKETYWG 248
           F   ST EVYGD PL+        G
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEG 144

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 20/134 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV- 173
           +++VTGG GF+GS+ +  ++ +     VI +D   +     N+     +P +  ++ DV 
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVA 64

Query: 174 ----VEPLLLEVDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNMLGLAKR--VG 222
               V+ L+ +VD + HLA  A S V        +P   + +NV+GT  +L   +R    
Sbjct: 65  DYELVKELVRKVDGVVHLA--AESHVDRSIS---SPEIFLHSNVIGTYTLLESIRRENPE 119

Query: 223 ARFLLTSTSEVYGD 236
            RF+  ST EVYGD
Sbjct: 120 VRFVHVSTDEVYGD 133

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 33/155 (21%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I++ GGAG++GSH V +L+  G SV+VVDN  TG ++ +         +    D+ +   
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----TEGAKFYNGDLRDKAF 58

Query: 179 LE-------VDQIYHLACPAS---------PVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
           L        ++ + H A  A          P+ Y  N       NV G L +L +     
Sbjct: 59  LRDVFTQENIEAVMHFA--ADSLVGVSMEKPLQYYNN-------NVYGALCLLEVMDEFK 109

Query: 223 -ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
             +F+ +ST+  YG+       E      NP  TY
Sbjct: 110 VDKFIFSSTAATYGEVDVDLITEET--MTNPTNTY 142

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 21/149 (14%)

Query: 104 SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHH 160
             G   L  +   + I+VTGGAGF+GS+ V  ++       +I  D   ++G   NV   
Sbjct: 12  DLGTENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI 71

Query: 161 FGNPNFELIRHDV-----VEPLLLE--VDQIYHLACPA-SPV----HYKFNPVKTIKTNV 208
             +PN+  ++ ++     +E ++ E  V  I + A  A S V        NP+    TNV
Sbjct: 72  QDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFA--AESHVDRSIE---NPIPFYDTNV 126

Query: 209 VGTLNMLGLAKRVGA-RFLLTSTSEVYGD 236
           +GT+ +L L K+    + +  ST EVYG 
Sbjct: 127 IGTVTLLELVKKYPHIKLVQVSTDEVYGS 155

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score = 77.9 bits (193), Expect = 1e-16
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 29/143 (20%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
           +I++TGGAGF+GS +V  +I    D+V+ +D   + G  E++     +  +     D+  
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 174 ---VEPLLLE--VDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNML-------- 215
              +  +  +   D + HLA  A S V         P   I+TN+VGT  +L        
Sbjct: 62  SAEITRIFEQYQPDAVMHLA--AESHVDRSIT---GPAAFIETNIVGTYALLEVARKYWS 116

Query: 216 --GLAKRVGARFLLTSTSEVYGD 236
             G  K+   RF   ST EVYGD
Sbjct: 117 ALGEDKKNNFRFHHISTDEVYGD 139

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 20/139 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-----FELIRHD 172
           R ++TG AGFVG +L + L  +   V         +  NV     +        ++I   
Sbjct: 14  RALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD- 72

Query: 173 VVEPLLLEVDQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--ARFLLT 228
            ++P     D I+HLA  A S V   + N   T  TNV GTL++L   +      R L  
Sbjct: 73  -IKP-----DYIFHLA--AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTI 124

Query: 229 STSEVYG--DPLQHPQKET 245
            +SE YG   P + P  E 
Sbjct: 125 GSSEEYGMILPEESPVSEE 143

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 70.4 bits (173), Expect = 4e-14
 Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 26/156 (16%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNPNFELIRHD 172
           +G  ++VTG  GFV SH+V++L+  G  V           +  N+   +           
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS---ASKLANLQKRWDAKYPGRFETA 66

Query: 173 VVEPLLLE---------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
           VVE +L +            + H+   AS V +     + +   + GTLN L  A    +
Sbjct: 67  VVEDMLKQGAYDEVIKGAAGVAHI---ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS 123

Query: 224 --RFLLT-STSEVYGDPLQHPQK---ETYWGNVNPI 253
             RF+LT ST                E  W   N  
Sbjct: 124 VKRFVLTSSTVSALIPKPNVEGIYLDEKSW---NLE 156

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 35/169 (20%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
              V GG GFV S LV  L+ +G +V   V D      ++ V H         ++  +  
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRD---PDNQKKVSHLLELQELGDLK--IFR 65

Query: 176 PLLLE----------VDQIYHLACPASPVHYKF-NPVK-TIKTNVVGTLNMLGLAKRVGA 223
             L +           D ++H+   A+PVH+   +P    IK  + G +N++    R  +
Sbjct: 66  ADLTDELSFEAPIAGCDFVFHV---ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKS 122

Query: 224 --RFLLT-STSEVYGDPLQHPQK---ETYWGNV-------NPIGTYFFS 259
             R +LT S + V  + L        E  W ++        P   Y  S
Sbjct: 123 VKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPAS 171

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 66.7 bits (164), Expect = 7e-13
 Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 25/156 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
            I+VTGGAG++GSH    L+A G  V++ DN    ++E +  +             DV +
Sbjct: 7   TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD 66

Query: 176 PLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV 221
              L        +    H A         A P+ Y  N       N+   L++L + +  
Sbjct: 67  ERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRN-------NLDSLLSLLRVMRER 119

Query: 222 GARFLLTSTS-EVYGDPLQHPQKETY-WGNVNPIGT 255
             + ++ S+S  VYG P + P  ET+     NP G 
Sbjct: 120 AVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQ 155

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 65.2 bits (160), Expect = 2e-12
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 24/145 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
           R++VTGG+G++GSH   +L+  G  VI++DN    ++  +  +   G  +   +  D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 176 PLLLE-------VDQIYHLAC-------PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV 221
             L+        +D + H A           P+ Y  N       NV GTL ++   +  
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLISAMRAA 114

Query: 222 GARFLLTSTSE-VYGDPLQHPQKET 245
             +  + S+S  VYGD  + P  E+
Sbjct: 115 NVKNFIFSSSATVYGDNPKIPYVES 139

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 46/164 (28%)

Query: 118 RIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHHFGNPNF---------- 166
           R++V GGAG++GSH V  L+     SV++VD+      ++                    
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 167 --------ELIRHDVVEPLLLE--------VDQIYHLACPAS---------PVHYKFNPV 201
                    L   DV     L         +D + H+   A          P+ Y  N  
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMC--AFLAVGESVRDPLKYYDN-- 119

Query: 202 KTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKE 244
                NVVG L +L         + + +S++ ++G+P       
Sbjct: 120 -----NVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVST 158

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 63.6 bits (155), Expect = 4e-12
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 18/119 (15%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +IV+ G +GFVGS L++  + RG  V         R    +    N + ++ + DV    
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTA-----VVRHPEKI-KIENEHLKVKKADVSSLD 59

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
            V  +    D +     P        N        +   L ++   K+ G  RFL+   
Sbjct: 60  EVCEVCKGADAVISAFNPGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 38/166 (22%), Positives = 58/166 (34%), Gaps = 29/166 (17%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNP----NFELIRH 171
           R+ VTGG GF+GS ++  L+  G SV   +  +    RK +V      P           
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRAD--PERKRDVSFLTNLPGASEKLHFFNA 60

Query: 172 DVVEPLLLE-----VDQIYHLACPASPVHYKF--NPVKTIKTNVVGTLNMLGLAKRVGA- 223
           D+  P            I+H    ASP+ +          K  V G L +L         
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHT---ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTV 117

Query: 224 -RFLLTST--SEVYGDPLQHPQKETYWGNV-------NPIGTYFFS 259
            RF+ TS+  +  +    +    E+ W +V            Y  S
Sbjct: 118 KRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVS 163

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 63.7 bits (156), Expect = 1e-11
 Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 30/151 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--------MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +           +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 170 RHDVVEPLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTLNML 215
             D+++   L+          + H A           P+ Y          N+ GT+ +L
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRV-------NLTGTIQLL 116

Query: 216 GLAKRVGARFLLTSTSE-VYGDPLQHPQKET 245
            + K  G + L+ S+S  VYG+P   P  E 
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEA 147

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 24/148 (16%)

Query: 113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIR 170
           +     ++VTGGAG++GSH V  LI  G   +V DN      ++V  +      +     
Sbjct: 8   ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYE 67

Query: 171 HDVVEPLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTLNMLG 216
            D+ +   LE       +D + H A           P+ Y  N       N++GT+ +L 
Sbjct: 68  VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHN-------NILGTVVLLE 120

Query: 217 LAKRVGARFLLTSTSE-VYGDPLQHPQK 243
           L ++      + S+S  VYGD  + P  
Sbjct: 121 LMQQYNVSKFVFSSSATVYGDATRFPNM 148

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 30/169 (17%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNP----NFEL 168
           +   + VTG +GF+GS LV RL+ RG +V   V D       + V H    P    +  L
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD---PTNVKKVKHLLDLPKAETHLTL 60

Query: 169 IRHDVVEPLLLE-----VDQIYHLACPASPVHYKF-NPVK-TIKTNVVGTLNMLGLAKRV 221
            + D+ +    +        ++H+   A+P+ ++  +P    IK  + G L ++      
Sbjct: 61  WKADLADEGSFDEAIKGCTGVFHV---ATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA 117

Query: 222 GA--RFLLT-STSEVYGDPLQ-HPQKETYWGNV-------NPIGTYFFS 259
               R + T S   V     Q     E+ W ++            YF S
Sbjct: 118 KTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVS 166

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 60.1 bits (145), Expect = 2e-10
 Identities = 17/133 (12%), Positives = 37/133 (27%), Gaps = 11/133 (8%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---- 176
           + G  G +G+ L + L            +   R+        +     ++ D+ +P    
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA-WHEDNPINYVQCDISDPDDSQ 64

Query: 177 -LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSE 232
             L  +  + H+              +  + N     N+L              L +  +
Sbjct: 65  AKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 233 VYGDPLQHPQKET 245
            Y  P +   K  
Sbjct: 123 HYMGPFESYGKIE 135

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 13/134 (9%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH 171
           L  +G+R++V G  G V  +L+  L  +G   +         +E           +++  
Sbjct: 17  LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVA----MVRNEEQGPELRERGASDIVVA 72

Query: 172 DVVEPL---LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 227
           ++ E        +D +   A  + P        KTI  ++ G +  +  A++ G  RF++
Sbjct: 73  NLEEDFSHAFASIDAVVFAAG-SGP---HTGADKTILIDLWGAIKTIQEAEKRGIKRFIM 128

Query: 228 TSTSEVYGDPLQHP 241
            S+     DP Q P
Sbjct: 129 VSSVGT-VDPDQGP 141

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 59.5 bits (144), Expect = 3e-10
 Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 22/173 (12%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-------DNFFT--GRKENVMHHFGN-P 164
           +G R+ VTG  GF G  L   L   G +V           + F      + +    G+  
Sbjct: 8   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 67

Query: 165 NFELIRHDVVEPLLLEVDQIYHLACPASP-VH--YKFNPVKTIKTNVVGTLNMLGLAKRV 221
           +   +   + E    + + ++H+A  A P V   Y   PV+T  TNV+GT+ +L   + V
Sbjct: 68  DQNKLLESIRE---FQPEIVFHMA--AQPLVRLSYS-EPVETYSTNVMGTVYLLEAIRHV 121

Query: 222 G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR 272
           G     +  ++ + Y +             +     Y  S     LV  S   
Sbjct: 122 GGVKAVVNITSDKCYDNKEWIWGYRENE-AMGGYDPYSNSKGCAELVTSSYRN 173

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 56.8 bits (138), Expect = 2e-09
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 20/140 (14%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           VTG  G  G++L   L+ +G  V  +V    +    R           + +    D+ + 
Sbjct: 19  VTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR---ELGIEGDIQYEDGDMADA 75

Query: 177 -----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--ARF 225
                 +++    ++Y+LA  A S V   +  PV T   + +G  ++L   ++     RF
Sbjct: 76  CSVQRAVIKAQPQEVYNLA--AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 133

Query: 226 LLTSTSEVYGDPLQHPQKET 245
              STSE++G      Q E 
Sbjct: 134 YQASTSEMFGLIQAERQDEN 153

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 54.2 bits (130), Expect = 5e-09
 Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 12/125 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I + G  G  GS +++    RG  V  +      R    +    + +  +++ D+ +  
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIV-----RNAGKITQT-HKDINILQKDIFDLT 55

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
           L        L+     V          + +V    +++ +     +  LL          
Sbjct: 56  LS------DLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQI 109

Query: 238 LQHPQ 242
            +   
Sbjct: 110 DEDGN 114

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 53.9 bits (130), Expect = 6e-09
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 18/130 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +I + G  G  G   + + +  G  V V+      R  + +   G     ++  DV    
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVL-----VRDSSRLPSEGPRPAHVVVGDVLQAA 59

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            V+  +   D +              +P         G  N++   K  G  + +  +++
Sbjct: 60  DVDKTVAGQDAVIV----LLGTRNDLSPT---TVMSEGARNIVAAMKAHGVDKVVACTSA 112

Query: 232 EVYGDPLQHP 241
            +  DP + P
Sbjct: 113 FLLWDPTKVP 122

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 53.9 bits (129), Expect = 8e-09
 Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 16/129 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD---VV 174
           +I V G  G  GS +V     RG  V+ V      R               +  +   + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAV-----VRDPQKAADRLGATVATLVKEPLVLT 56

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
           E  L  VD +             +        ++    +++ L +        +  ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRGY-------LHLDFATHLVSLLRNSDTLAVFILGSASL 109

Query: 234 YGDPLQHPQ 242
                 HP 
Sbjct: 110 AMPGADHPM 118

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 39/154 (25%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV------DNFFTGRKENVMHHFGNPNFEL 168
           +   +++TG  GF+G +LV  L+ R D    +      ++    R   +   F + + EL
Sbjct: 72  ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPEL 130

Query: 169 IRH--------------DVVEP-----------LLLEVDQIYHLACPASPVHYKFNP-VK 202
           +RH              D  EP           L   VD I   A   + V+    P  +
Sbjct: 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSA---AMVN--AFPYHE 185

Query: 203 TIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYG 235
               NV GT  ++ +A       F   ST++V  
Sbjct: 186 LFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA 219

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 22/120 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +I + G  G VG  L+  L      +         RK   +  +   N + +  DV    
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAG-----ARKVEQVPQY--NNVKAVHFDVDWTP 54

Query: 174 --VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
             +   L  +D I +++               +K ++ G + ++  A++    RF+L ST
Sbjct: 55  EEMAKQLHGMDAIINVS--------GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 28/167 (16%)

Query: 101 AVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKEN 156
           +     K   G  R     ++TG  G  GS+L + L+ +G  V  IV    +F TGR E+
Sbjct: 11  SSGRENKYFQGHMRN--VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH 68

Query: 157 VM---HHFGNPNFELIRHDVVEP-----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTI 204
           +          N +L   D+ +      ++ EV   +IY+L   A S V   F     T 
Sbjct: 69  LYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLG--AQSHVKISFDLAEYTA 126

Query: 205 KTNVVGTLNML------GLAKRVGARFLLTSTSEVYGDPLQHPQKET 245
             + VGTL +L      GL   V  +F   STSE+YG   + PQKET
Sbjct: 127 DVDGVGTLRLLDAVKTCGLINSV--KFYQASTSELYGKVQEIPQKET 171

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 51.4 bits (124), Expect = 9e-08
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 20/140 (14%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +TG  G  G++L   L+ +G  V         F + R +         + ++I  D++E 
Sbjct: 8   ITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK---ELGIENDVKIIHMDLLEF 64

Query: 177 -----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--ARF 225
                 + +V  D++Y+LA  A S V   F  P+ T + + +G L +L   + V    +F
Sbjct: 65  SNIIRTIEKVQPDEVYNLA--AQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKF 122

Query: 226 LLTSTSEVYGDPLQHPQKET 245
              STSE++G   + PQ E 
Sbjct: 123 YQASTSEMFGKVQEIPQTEK 142

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVV---DNFFTGRKENVM-HHFGNPNFELI 169
               I++TGG G  G   V +++   +   I+V   D      K++ M   F +P     
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDEL----KQSEMAMEFNDPRMRFF 75

Query: 170 RHDV-----VEPLLLEVDQIYHLAC----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKR 220
             DV     +   L  VD   H A     P +    ++NP++ IKTN++G  N++    +
Sbjct: 76  IGDVRDLERLNYALEGVDICIHAAALKHVPIA----EYNPLECIKTNIMGASNVINACLK 131

Query: 221 VG-ARFLLTST 230
              ++ +  ST
Sbjct: 132 NAISQVIALST 142

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 10/71 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            + +TG  G VG  L  +L   G  VI +      ++      F +P            L
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQL----VRKEPKPGKRFWDPLNPASD------L 198

Query: 178 LLEVDQIYHLA 188
           L   D + HLA
Sbjct: 199 LDGADVLVHLA 209

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 25/146 (17%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMH--HFGNPNFELIRHDVV 174
           +TG  G  GS+L + L+ +G  V  I     +F T R +++    H  NP F L   D+ 
Sbjct: 6   ITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS 65

Query: 175 EP-----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNML------GLAK 219
           +      +L EV  D++Y+L   A S V   F +P  T   + +GTL +L      GL K
Sbjct: 66  DTSNLTRILREVQPDEVYNLG--AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 220 RVGARFLLTSTSEVYGDPLQHPQKET 245
           +   RF   STSE+YG   + PQKET
Sbjct: 124 KT--RFYQASTSELYGLVQEIPQKET 147

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 25/147 (17%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVM---HHFGNPNFELIRHDV 173
           +TG  G  GS+L + L+ +G  V  ++    NF T R  ++    H+      +L   D+
Sbjct: 33  ITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADL 92

Query: 174 VEP-----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNML------GLA 218
            +       +  +  D++Y+LA  A S V   F  P  T      G L +L       + 
Sbjct: 93  TDASSLRRWIDVIKPDEVYNLA--AQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTID 150

Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKET 245
                ++    +SE++G     PQ ET
Sbjct: 151 SGRTVKYYQAGSSEMFGS-TPPPQSET 176

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 23/132 (17%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            ++VTG +G  G  +  +L    D  +        R        G    ++   D+ +  
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKG---LVRSAQGKEKIG-GEADVFIGDITDAD 61

Query: 178 LLE-----VDQIYHLA-------------CPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 219
            +      +D +  L                  P     +     + + +G  N +  AK
Sbjct: 62  SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121

Query: 220 RVG-ARFLLTST 230
             G    ++  +
Sbjct: 122 VAGVKHIVVVGS 133

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 45.2 bits (107), Expect = 7e-06
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 16/124 (12%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
           +   + + G +G  G  L+  ++ +G    V ++     GR++         N      D
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLI-----GRRKLTFDEEAYKNVNQEVVD 71

Query: 173 V-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 226
                         D  +           K      ++ +    L    LAK  G   F 
Sbjct: 72  FEKLDDYASAFQGHDVGFCCLG---TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFN 128

Query: 227 LTST 230
           L S+
Sbjct: 129 LLSS 132

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT----GRKENVMHHFGNPNFELIRHDV 173
           +I++ G  G +G  L  RL A+G  V  +              V     +    + R D 
Sbjct: 5   KILIAG-CGDLGLELARRLTAQGHEVTGL----RRSAQPMPAGVQTLIAD----VTRPDT 55

Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
           +  ++    +I      AS    +++      + V G  N L   +          S++ 
Sbjct: 56  LASIVHLRPEILVYCVAAS----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG 111

Query: 233 VYGD 236
           VYG 
Sbjct: 112 VYGQ 115

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 42.1 bits (99), Expect = 9e-05
 Identities = 17/126 (13%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            +++ G  G +  H++++L  +      +      R+   +H     N ++I  DV+   
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTL----FARQPAKIHKPYPTNSQIIMGDVLNHA 80

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTS 231
            L+      D +Y                 T +   +   +++   K     R +   + 
Sbjct: 81  ALKQAMQGQDIVYANL--------------TGEDLDIQANSVIAAMKACDVKRLIFVLSL 126

Query: 232 EVYGDP 237
            +Y + 
Sbjct: 127 GIYDEV 132

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 21/148 (14%), Positives = 40/148 (27%), Gaps = 30/148 (20%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVV 174
            I + G AG +   L   L+   D  I +     GR+           +    +I     
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL----YGRQLKTRIPPEIIDHERVTVIEGSFQ 62

Query: 175 EPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
            P  LE      + ++                     +     +++    R   R ++  
Sbjct: 63  NPGXLEQAVTNAEVVFV----------------GAMESGSDMASIVKALSRXNIRRVIGV 106

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGTYF 257
           +    G   + P     W   N   +Y 
Sbjct: 107 SM--AGLSGEFPVALEKWTFDNLPISYV 132

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 11/60 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
           R+++ G  G  G HL+DR+++      VI        RK    H    P  +     + E
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAP-----ARKALAEH----PRLDNPVGPLAE 57

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 19/96 (19%), Positives = 27/96 (28%), Gaps = 23/96 (23%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
            I V G AG +G  +   L    + SV V D          +           + D  + 
Sbjct: 7   NICVVG-AGKIGQMIAALLKTSSNYSVTVAD-----HDLAALAVLNRMGVATKQVDAKDE 60

Query: 177 -----LLLEVD-----QIYHL------ACPASPVHY 196
                 L   D       + L      A  A+  HY
Sbjct: 61  AGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHY 96

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 20/118 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            I++TG  G +G+H+ ++ IA       +      R    +         + + D     
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHI----GVRNVEKVPDDWRGKVSVRQLDYFNQE 57

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL-LTS 229
            +      +D +  +     P              +    N++  AK+ G   +    
Sbjct: 58  SMVEAFKGMDTVVFIPSIIHPSF----------KRIPEVENLVYAAKQSGVAHIIFIG 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	290
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.94
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.94
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.94
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.93
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.93
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.93
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.92
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.9
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.9
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.9
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.89
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.89
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.89
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.89
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.89
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.88
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.88
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.87
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.87
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.87
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.86
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.85
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.85
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.85
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.84
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.84
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.84
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.83
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.83
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.83
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.83
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.83
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.83
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.83
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.83
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.83
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.83
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.83
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.83
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.82
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.82
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.82
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.82
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.82
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.82
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.82
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.82
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.82
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.82
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.82
1spx_A	278	Short-chain reductase family member (5L265); paral	99.82
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.81
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.81
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.81
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.81
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.81
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.81
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.81
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.81
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.81
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.81
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.81
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.81
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.81
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.81
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.81
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.81
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.81
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.81
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.81
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.81
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.81
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.81
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.81
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.81
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.81
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.81
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.81
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.81
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.81
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.81
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.81
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.81
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.81
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.8
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.8
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.8
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.8
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.8
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.8
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.8
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.8
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.8
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.8
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.8
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.8
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.8
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.8
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.8
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.8
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.8
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.8
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.8
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.8
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.8
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.8
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.8
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.8
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.8
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.8
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.8
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.8
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.8
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.8
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.8
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.8
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.8
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.8
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.8
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.8
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.8
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.8
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.8
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.8
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.79
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.79
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.79
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.79
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.79
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.79
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.79
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.79
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.79
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.79
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.79
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.79
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.79
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.79
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.79
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.79
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.79
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.79
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.79
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.79
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.79
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.79
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.79
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.79
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.79
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.79
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.79
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.79
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.79
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.79
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.79
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.79
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.78
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.78
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.78
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.78
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.78
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.78
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.78
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.78
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.78
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.78
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.78
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.78
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.78
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.78
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.78
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.78
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.78
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.78
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.78
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.78
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.78
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.77
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.77
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.77
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.77
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.77
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.77
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.77
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.77
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.77
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.77
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.77
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.77
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.77
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.77
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.77
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.77
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.77
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.77
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.77
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.77
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.77
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.77
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.77
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.77
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.77
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.76
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.76
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.76
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.76
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.76
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.76
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.76
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.76
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.76
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.75
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.75
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.75
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.75
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.75
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.75
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.75
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.74
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.74
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.74
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.74
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.74
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.73
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.73
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.73
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.73
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.72
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.71
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.71
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.7
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.69
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.68
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.68
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.65
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.64
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.63
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.63
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.63
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.62
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.59
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.59
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.58
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.58
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.57
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.57
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.57
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.56
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.55
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.52
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.48
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.45
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.43
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.42
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.38
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.37
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.37
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.36
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.19
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.04
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.95
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.89
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.89
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.88
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.87
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.63
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.55
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.51
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.45
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.39
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.31
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.3
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.28
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.17
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.09
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.09
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.06
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.02
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.88
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.86
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.86
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.83
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.83
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.81
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.78
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.77
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.75
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.75
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.74
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.71
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.66
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.66
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.65
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.65
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.59
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.58
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.56
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.56
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.55
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.55
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.55
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.54
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.49
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.48
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.47
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.44
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.43
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.4
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.4
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.39
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.38
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.38
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.36
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.36
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.34
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.34
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.33
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.32
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.31
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.31
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.3
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.29
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.26
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.26
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.24
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.24
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.23
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.22
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.21
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.17
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.16
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.15
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.12
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.11
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.09
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.07
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.06
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.06
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.05
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.99
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.99
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.96
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.96
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.95
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.94
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.93
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.93
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.92
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.9
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.89
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.84
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.84
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.83
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.81
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.77
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.75
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.74
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.69
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.68
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.67
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.66
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.64
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.62
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.61
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.57
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.56
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.54
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.53
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.53
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.5
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.46
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.45
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.44
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.42
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.37
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.33
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.33
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.31
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.29
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.29
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.29
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.24
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.22
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.15
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.15
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.13
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.13
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.12
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.11
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.07
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.05
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.03
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.99
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.98
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.96
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.92
3cmm_A	1015	Ubiquitin-activating enzyme E1 1; UBA1, protein tu	95.9
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	95.89
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.87
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	95.85
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.84
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.84
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.83
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.81
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.77
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	95.75
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.74
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.74
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	95.73
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.71
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	95.7
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.7
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.65
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.65
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.65
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.65
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.65
1tt5_A	531	APPBP1, amyloid protein-binding protein 1; cell cy	95.62
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.61
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.56
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.56
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.54
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.49
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.44
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.42
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.4
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.39
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.32
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.32
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.31
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.31
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.27
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.27
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.24
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.23
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.23
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.21
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.16
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.1
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.1
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.06
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.05

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.94  E-value=1.3e-26  Score=212.54  Aligned_cols=174  Identities=27%  Similarity=0.380  Sum_probs=148.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCC------CCeEEEEccccccc-----ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN------PNFELIRHDVVEPL-----LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~v~~~~~D~~~~~-----~~~vD  182 (290)
                      .++|+|+||||+||||++|+++|+++|++|++++|......+........      .+++++.+|+.+..     +.++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            56789999999999999999999999999999999766555444333221      67999999998763     45899


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSF  260 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~  260 (290)
                      +||||||.........++...+++|+.|+.+++++|++.+. +|||+||.++||.....+++|+.+ .+.++|+.+|...
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN  182 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence            99999997554445567888999999999999999999985 999999999999888888888774 5678999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |.+++.+.+++|++++++|++++.+..
T Consensus       183 E~~~~~~~~~~g~~~~ilRp~~v~G~~  209 (351)
T 3ruf_A          183 EIYAQVYARTYGFKTIGLRYFNVFGRR  209 (351)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECSEESTT
T ss_pred             HHHHHHHHHHhCCCEEEEeeCceeCcC
Confidence            999999999999999999999997754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.94  E-value=3.5e-26  Score=209.44  Aligned_cols=173  Identities=58%  Similarity=0.902  Sum_probs=145.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~  193 (290)
                      .++|+|+||||+||||++++++|+++|++|++++|......+.+.......+++++.+|+.+..+.++|+||||||....
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~~  104 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP  104 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECccccCc
Confidence            56789999999999999999999999999999998754444434333345679999999999999999999999997554


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC------CCCChhhhhHHHHHHHHHHH
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW------GNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~------~~~~py~~~k~~~e~~~~~~  267 (290)
                      ..+..++...+++|+.|+.+++++|++.+++||++||.++||.....+++|+.|      .+.++|+.+|...|.++..+
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  184 (343)
T 2b69_A          105 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  184 (343)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            445667888999999999999999998888999999999999877777888754      23456999999999999999


Q ss_pred             HHHhCCCeeEEEeeeeecc
Q 022900          268 ISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr~~  286 (290)
                      .++++++++++|++++.+.
T Consensus       185 ~~~~~~~~~ilrp~~v~G~  203 (343)
T 2b69_A          185 MKQEGVEVRVARIFNTFGP  203 (343)
T ss_dssp             HHHHCCCEEEEEECCEECT
T ss_pred             HHHhCCcEEEEEEcceeCc
Confidence            8888999999999998765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.94  E-value=3.9e-25  Score=199.38  Aligned_cols=165  Identities=34%  Similarity=0.483  Sum_probs=141.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc----cCCCEEEEcccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL----LEVDQIYHLACPAS  192 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~----~~vD~vih~Ag~~~  192 (290)
                      |+|+||||+||||++|+++|+++|++|++++|......+..     ...++++.+|+.+..+    .+ |+||||||...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~   74 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPE   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHHHHhhcCC-CEEEECCCCCC
Confidence            58999999999999999999999999999998755443322     4578889999988653    23 99999999765


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHHHH
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                      ......++...+++|+.|+.+++++|++.+. +||++||.++||.....+++|+.. .+.++|+.+|...|.+++.+.++
T Consensus        75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~  154 (312)
T 3ko8_A           75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARL  154 (312)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence            5556778899999999999999999998885 999999999999888788888763 56789999999999999999999


Q ss_pred             hCCCeeEEEeeeeeccc
Q 022900          271 FRPSRKACRFFILLYRN  287 (290)
Q Consensus       271 ~gl~~~ilR~~~lr~~~  287 (290)
                      ++++++++|++++.+..
T Consensus       155 ~g~~~~~lrp~~v~g~~  171 (312)
T 3ko8_A          155 FGVRCLAVRYANVVGPR  171 (312)
T ss_dssp             HCCEEEEEEECEEECTT
T ss_pred             hCCCEEEEeeccccCcC
Confidence            99999999999997653

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=1.9e-25  Score=204.49  Aligned_cols=174  Identities=25%  Similarity=0.342  Sum_probs=138.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCC-CCchhhhhcccCCCCeEEEEccccccc-----cc--CCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~  183 (290)
                      .++|+|+||||+||||.+|+++|+++|  ++|++++|.. ....+.+.......+++++.+|+.+..     +.  ++|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            467899999999999999999999999  6888888764 333344444434568999999998864     23  3999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCC-CCCCCCCCC-CCCCChhhhhHHHH
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETY-WGNVNPIGTYFFSF  260 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~-~~~~~~E~~-~~~~~py~~~k~~~  260 (290)
                      ||||||.........++..++++|+.|+.+++++|++.+. +||++||.++||.. ...++.|+. ..+.++|+.+|...
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~  181 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASA  181 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHH
Confidence            9999998655556677888999999999999999999986 89999999999976 455777766 35678999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |.++..+.++++++++++|++++.+.+
T Consensus       182 E~~~~~~~~~~g~~~~ilRp~~v~G~~  208 (346)
T 4egb_A          182 DMIALAYYKTYQLPVIVTRCSNNYGPY  208 (346)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEESTT
T ss_pred             HHHHHHHHHHhCCCEEEEeecceeCcC
Confidence            999999999999999999999997754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=3.4e-25  Score=202.23  Aligned_cols=172  Identities=23%  Similarity=0.330  Sum_probs=144.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc-----cc--CCCEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----LL--EVDQIY  185 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~-----~~--~vD~vi  185 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+.....+......  ...++.++.+|++++.     +.  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            46799999999999999999999999999999997655444333221  2357889999998764     23  799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLI  263 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~  263 (290)
                      ||||.........++.+.+++|+.++.+++++|++.+. +||++||.++||.....+++|+.. .+.++|+.+|...|.+
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            99997654445567778999999999999999999885 999999999999888888888764 4567999999999999


Q ss_pred             HHHHHHHhC-CCeeEEEeeeeecc
Q 022900          264 FLVFISQFR-PSRKACRFFILLYR  286 (290)
Q Consensus       264 ~~~~~~~~g-l~~~ilR~~~lr~~  286 (290)
                      ++.+..+++ ++++++|++++.+.
T Consensus       164 ~~~~~~~~~~~~~~~lRp~~v~G~  187 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYFNPVGA  187 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECC
T ss_pred             HHHHhhcCCCceEEEEeeccccCC
Confidence            999998876 99999999999775

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=4.8e-25  Score=201.86  Aligned_cols=160  Identities=25%  Similarity=0.235  Sum_probs=132.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ...++|+|+||||+||||++|++.|+++|++|++++|....           .+++++.+|+.+..     +.++|+|||
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence            45678899999999999999999999999999999986432           45778889998764     468999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccC--CCCCCCCCCCC-CCCChhhhhHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGD--PLQHPQKETYW-GNVNPIGTYFFSFSL  262 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~--~~~~~~~E~~~-~~~~py~~~k~~~e~  262 (290)
                      ||+.....  ..++...+++|+.|+.+++++|++.+. +||++||.++||.  ....++.|+.. .+.++|+.+|...|.
T Consensus        84 ~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~  161 (347)
T 4id9_A           84 LGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEE  161 (347)
T ss_dssp             CCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Confidence            99965332  233478999999999999999999886 9999999999998  56667777764 567889999999999


Q ss_pred             HHHHHHHHhCCCeeEEEeeeee
Q 022900          263 IFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      +++.+.++++++++++|++++.
T Consensus       162 ~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          162 LVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHHhcCCceEEEccceEe
Confidence            9999999999999999999987

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.93  E-value=1.2e-24  Score=196.60  Aligned_cols=166  Identities=30%  Similarity=0.459  Sum_probs=136.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc----ccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----LLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~----~~~vD~vih~Ag~~  191 (290)
                      ||+|+||||+||||++|+++|+++| .++++++......+..     ...++++.+|+.++.    +.++|+|||+|+..
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~   74 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAADDIKDYLKGAEEVWHIAANP   74 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTTSCCHHHHTTCSEEEECCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCChHHHHHHhcCCCEEEECCCCC
Confidence            4689999999999999999999999 5666655433332221     356889999998743    35799999999976


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      .......++..++++|+.|+.+++++|++.+. +||++||.++||.....+.+|+.. .+.++|+.+|...|.+++.+..
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  154 (313)
T 3ehe_A           75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCH  154 (313)
T ss_dssp             CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            55556778899999999999999999998885 999999999999888888888753 5567899999999999999999


Q ss_pred             HhCCCeeEEEeeeeeccc
Q 022900          270 QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~~  287 (290)
                      +++++++++|++++.+.+
T Consensus       155 ~~g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          155 TFDMQAWIYRFANVIGRR  172 (313)
T ss_dssp             HTTCEEEEEECSCEESTT
T ss_pred             hcCCCEEEEeeccccCcC
Confidence            999999999999997653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.93  E-value=1.3e-25  Score=207.64  Aligned_cols=169  Identities=18%  Similarity=0.205  Sum_probs=142.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccc-ccc-----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EPL-----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~-----~~~vD~vih  186 (290)
                      +++|+|+||||+||||++|+++|+++ |++|++++|......+    .....+++++.+|+. +..     +.++|+|||
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD----LVKHERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGG----GGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhh----hccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            56789999999999999999999998 9999999986543322    223468999999998 653     347999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC--------CCCChhhhhHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW--------GNVNPIGTYFF  258 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~--------~~~~py~~~k~  258 (290)
                      |||...+.....++.+.+++|+.|+.+++++|++.+++|||+||.++||.....++.|+.+        .+.++|+.+|.
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~  177 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQ  177 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHH
Confidence            9998665555667888999999999999999998888999999999999887777777653        24458999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.++..+.++ +++++++|++++.+.+
T Consensus       178 ~~E~~~~~~~~~-g~~~~ilRp~~v~G~~  205 (372)
T 3slg_A          178 LMDRVIWGYGME-GLNFTLFRPFNWIGPG  205 (372)
T ss_dssp             HHHHHHHHHHTT-TCEEEEEEECSEECSS
T ss_pred             HHHHHHHHHHHC-CCCEEEEccccccCCC
Confidence            999999999888 9999999999987654

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.93  E-value=1.1e-24  Score=196.99  Aligned_cols=159  Identities=24%  Similarity=0.291  Sum_probs=135.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~Ag~  190 (290)
                      +|+|+||||+||||++++++|+++|++|++++|. ....+ +      .+++++.+|+. .     .+.++|+||||||.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-I------NDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-C------CceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence            4799999999999999999999999999999997 22222 2      17888999997 4     35689999999997


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ....    ++...+++|+.++.+++++|++.+. +||++||.++||.....++.|+.. .+.++|+.+|...|.++..+.
T Consensus        73 ~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  148 (311)
T 3m2p_A           73 RGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYS  148 (311)
T ss_dssp             CCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Confidence            5433    6777889999999999999999886 899999999999887788888763 566899999999999999999


Q ss_pred             HHhCCCeeEEEeeeeeccc
Q 022900          269 SQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~  287 (290)
                      ++++++++++|++++.+.+
T Consensus       149 ~~~g~~~~ilRp~~v~G~~  167 (311)
T 3m2p_A          149 RKKGLCIKNLRFAHLYGFN  167 (311)
T ss_dssp             HHSCCEEEEEEECEEECSC
T ss_pred             HHcCCCEEEEeeCceeCcC
Confidence            9999999999999987654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=9.8e-25  Score=198.75  Aligned_cols=172  Identities=24%  Similarity=0.352  Sum_probs=140.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCC-CchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      +|+|+||||+||||++++++|+++|  ++|++++|... ...+.+.......+++++.+|+.+..     +.++|+||||
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            4689999999999999999999996  89999998642 22233333323457999999998763     3579999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~  264 (290)
                      ||.........++..++++|+.|+.+++++|.+.+  ++||++||.++||.....+++|+.. .+.++|+.+|...|.++
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  162 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLV  162 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence            99754322345678899999999999999998876  4999999999999876667777753 45679999999999999


Q ss_pred             HHHHHHhCCCeeEEEeeeeeccc
Q 022900          265 LVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +.+..+++++++++|++++....
T Consensus       163 ~~~~~~~~~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          163 LGWTRTYNLNASITRCTNNYGPY  185 (336)
T ss_dssp             HHHHHHTTCEEEEEEECEEESTT
T ss_pred             HHHHHHhCCCEEEEeeeeeeCcC
Confidence            99999899999999999986643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=6.7e-25  Score=201.61  Aligned_cols=174  Identities=28%  Similarity=0.365  Sum_probs=143.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cC---CCCeEEEEccccccc-----ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FG---NPNFELIRHDVVEPL-----LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~v~~~~~D~~~~~-----~~~vD  182 (290)
                      +++|+|+||||+||||++++++|+++|++|++++|......+.+...   ..   ..+++++.+|+.+..     +.++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            56789999999999999999999999999999999754333322211   11   257899999998753     45799


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSF  260 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~  260 (290)
                      +||||||.........++...+++|+.|+.+++++|++.+. +||++||.++||.....+++|+.+ .+.++|+.+|...
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999997543333457788999999999999999999885 999999999999877777778764 4567899999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |.+++.+.++++++++++|++++....
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~~v~G~~  211 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYFNVFGRR  211 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTT
T ss_pred             HHHHHHHHHHcCCCEEEEEECceeCcC
Confidence            999999998899999999999987653

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.93  E-value=8.6e-25  Score=198.65  Aligned_cols=167  Identities=23%  Similarity=0.373  Sum_probs=139.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~A  188 (290)
                      ||+|+||||+||||++++++|+++|++|++++|......+.+    . .+++++.+|+.+..     +.  ++|+|||||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI----T-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS----C-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc----C-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            478999999999999999999999999999998654433222    1 26888999998763     34  799999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~  266 (290)
                      |.........++..++++|+.|+.+++++|++.+. +||++||.++||.....+++|+.+ .+.++|+.+|...|.+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            97543333457788999999999999999999885 999999999999877778888764 4568999999999999999


Q ss_pred             HHHHhCCCeeEEEeeeeeccc
Q 022900          267 FISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +.++++++++++|++++.+.+
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCC
T ss_pred             HHHHhCCcEEEEecCcccCCC
Confidence            998889999999999987653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.92  E-value=2.1e-25  Score=201.34  Aligned_cols=168  Identities=28%  Similarity=0.392  Sum_probs=137.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC---CchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT---GRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++|+|+||||+||||++++++|+++|++|++++|...   ...+.+.......+++++.+|+.     ++|+||||||.
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~d~vi~~a~~   79 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----DVRLVYHLASH   79 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----TEEEEEECCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----cCCEEEECCcc
Confidence            45789999999999999999999999999999999755   23333333333445666666665     89999999997


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ........++...++ |+.++.+++++|++.+. +||++||.++||.....++.|+.+ .+.++|+.+|...|.+++.+.
T Consensus        80 ~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  158 (321)
T 3vps_A           80 KSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQ  158 (321)
T ss_dssp             CCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            654445566667778 99999999999999984 999999999999887778888763 567889999999999999999


Q ss_pred             HHhCC-CeeEEEeeeeeccc
Q 022900          269 SQFRP-SRKACRFFILLYRN  287 (290)
Q Consensus       269 ~~~gl-~~~ilR~~~lr~~~  287 (290)
                      +++++ +++++|++++.+..
T Consensus       159 ~~~~~~~~~ilRp~~v~G~~  178 (321)
T 3vps_A          159 RASVAPEVGIVRFFNVYGPG  178 (321)
T ss_dssp             HSSSSCEEEEEEECEEECTT
T ss_pred             HHcCCCceEEEEeccccCcC
Confidence            99999 99999999997654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=1.3e-24  Score=192.96  Aligned_cols=159  Identities=19%  Similarity=0.193  Sum_probs=135.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag  189 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+.....        ..+++++.+|+++..     +.++|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            4679999999999999999999999999999998643322        457899999998763     467999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccC-CCCCCCCCCCC-CCCChhhhhHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGD-PLQHPQKETYW-GNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~-~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~  266 (290)
                      .    ....++++++++|+.|+.+++++|++.+. +||++||.++||. ....++.|+.. .+..+|+.+|...|.+++.
T Consensus        74 ~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  149 (267)
T 3rft_A           74 I----SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARM  149 (267)
T ss_dssp             C----CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             C----cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            6    24567889999999999999999998885 9999999999974 33456666553 5567899999999999999


Q ss_pred             HHHHhCCCeeEEEeeeeec
Q 022900          267 FISQFRPSRKACRFFILLY  285 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~  285 (290)
                      +.++++++++++|++++..
T Consensus       150 ~a~~~g~~~~~vr~~~v~~  168 (267)
T 3rft_A          150 YFDKFGQETALVRIGSCTP  168 (267)
T ss_dssp             HHHHHCCCEEEEEECBCSS
T ss_pred             HHHHhCCeEEEEEeecccC
Confidence            9999999999999998864

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=1.2e-24  Score=199.21  Aligned_cols=171  Identities=26%  Similarity=0.291  Sum_probs=138.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCC-chhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      ||+|+||||+||||++++++|+++  |++|++++|.... ..+.+... ...+++++.+|++++.     +.++|+||||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAAKADAIVHY   82 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh-ccCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence            579999999999999999999999  8999999986432 22222222 2367899999998763     4578999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCC------------CCCCCCCC-CCCChhh
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ------------HPQKETYW-GNVNPIG  254 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~------------~~~~E~~~-~~~~py~  254 (290)
                      ||.........+++..+++|+.|+.+++++|.+.+.+||++||.++||....            .+++|+.. .+.++|+
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence            9975432234567889999999999999999988789999999999986532            56667653 4567999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+|...|.+++.+..+++++++++|++++.+..
T Consensus       163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~  195 (348)
T 1oc2_A          163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPY  195 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCC
Confidence            999999999999998899999999999987543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=1.6e-24  Score=197.21  Aligned_cols=173  Identities=18%  Similarity=0.138  Sum_probs=139.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhcccCCCCeEEEEccccccc-----cc--CCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vi  185 (290)
                      ..+++|+||||+||||.+++++|+++|++|++++|...... ..+.......+++++.+|+.+..     +.  ++|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            45789999999999999999999999999999999754321 11221112356889999998763     22  479999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSL  262 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~  262 (290)
                      ||||.........++..++++|+.|+.+++++|++.+  ++||++||.++||.....+++|+.+ .+.++|+.+|...|.
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  171 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  171 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHH
Confidence            9999754433456788999999999999999999876  4999999999999877767777763 556789999999999


Q ss_pred             HHHHHHHHhCCCeeEEEeeeeecc
Q 022900          263 IFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ++..+.++++++++++|++++.+.
T Consensus       172 ~~~~~~~~~~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          172 ITVNYRESFGLHASSGILFNHESP  195 (335)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECT
T ss_pred             HHHHHHHHcCCcEEEEeeCcccCC
Confidence            999999989999999999988654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.92  E-value=3e-24  Score=195.82  Aligned_cols=171  Identities=27%  Similarity=0.338  Sum_probs=139.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC---C---CeEEEEeCCCCC-chhhhhcccCCCCeEEEEccccccc-----ccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR---G---DSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~---G---~~V~~~~r~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~v  184 (290)
                      |+|+||||+||||++++++|+++   |   ++|++++|.... ..+.+.......+++++.+|+++..     +.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            47999999999999999999997   8   999999986422 2233333323457899999998763     4679999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSL  262 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~  262 (290)
                      |||||.........++..++++|+.|+.+++++|.+.+. +||++||.++||.....+++|+.. .+.++|+.+|...|.
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            999997543223456778999999999999999999886 999999999999776667777653 566899999999999


Q ss_pred             HHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          263 IFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +++.+.++++++++++|++++.+..
T Consensus       161 ~~~~~~~~~g~~~~ilrp~~v~G~~  185 (337)
T 1r6d_A          161 VARAYHRTYGLDVRITRCCNNYGPY  185 (337)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHCCCEEEEEeeeeECCC
Confidence            9999998899999999999986543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=1.3e-24  Score=201.96  Aligned_cols=171  Identities=23%  Similarity=0.299  Sum_probs=132.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      .++|+|+||||+||||++++++|+++| ++|++++|......+.+.   ...+++++.+|+.++.     +.++|+||||
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~  106 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHL  106 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence            567899999999999999999999999 999999986544332221   2457899999998753     4589999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCCccccCCCCCCCC--CCCC-----CCCChhhhhHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQK--ETYW-----GNVNPIGTYFF  258 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~-riV~vSS~~vyg~~~~~~~~--E~~~-----~~~~py~~~k~  258 (290)
                      ||.........++...+++|+.++.+++++|++. +. +||++||.++||.....++.  |+.|     .+.++|+.+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            9975433334577889999999999999999988 75 99999999999987666777  7753     56789999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.+++.+.++++++++++|++++.+..
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~  215 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPG  215 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCC
Confidence            99999999998889999999999987653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=3.8e-24  Score=197.45  Aligned_cols=170  Identities=25%  Similarity=0.352  Sum_probs=138.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH--CCCeEEEEeCCCCCc------hhhh--hcccCCCCeEEEEccccccc-----
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIA--RGDSVIVVDNFFTGR------KENV--MHHFGNPNFELIRHDVVEPL-----  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~--~G~~V~~~~r~~~~~------~~~~--~~~~~~~~v~~~~~D~~~~~-----  177 (290)
                      .+++|+|+||||+||||++++++|++  +|++|++++|.....      .+.+  .......++.++.+|+++..     
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            35789999999999999999999999  999999999865411      0000  01113456799999998763     


Q ss_pred             -ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhh
Q 022900          178 -LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGT  255 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~  255 (290)
                       ..++|+||||||...  ....++...+++|+.|+.+++++|++.+.+||++||.++||.... +.+|+. ..+.++|+.
T Consensus        87 ~~~~~D~vih~A~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~  163 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSD--TTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-PNVVGKNESPENVYGF  163 (362)
T ss_dssp             TTSCCSEEEECCCCCG--GGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHH
T ss_pred             hccCCCEEEECCccCC--ccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-CCCCCCCCCCCChhHH
Confidence             467999999999643  256788999999999999999999998888999999999998766 777765 356778999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          256 YFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +|...|.+++.+..+  ++++++|++++.+.+
T Consensus       164 sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~  193 (362)
T 3sxp_A          164 SKLCMDEFVLSHSND--NVQVGLRYFNVYGPR  193 (362)
T ss_dssp             HHHHHHHHHHHTTTT--SCEEEEEECSEESTT
T ss_pred             HHHHHHHHHHHHhcc--CCEEEEEeCceeCcC
Confidence            999999988888765  899999999987654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=2.3e-24  Score=195.03  Aligned_cols=165  Identities=27%  Similarity=0.333  Sum_probs=136.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih  186 (290)
                      .+.|+|+||||+||||++++++|+++|++|++++|+... ..    +    +++++.+|+++..     +.  ++|+|||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   80 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P----NVEMISLDIMDSQRVKKVISDIKPDYIFH   80 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T----TEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c----eeeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            466899999999999999999999999999999987543 11    1    6888999998763     22  3899999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEcCCccccCC--CCCCCCCCCC-CCCChhhhhHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G-ARFLLTSTSEVYGDP--LQHPQKETYW-GNVNPIGTYFFSFS  261 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~-~riV~vSS~~vyg~~--~~~~~~E~~~-~~~~py~~~k~~~e  261 (290)
                      |||.........++...+++|+.|+.+++++|.+. + ++||++||.++||..  ...+++|+.+ .+.++|+.+|...|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E  160 (321)
T 2pk3_A           81 LAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVG  160 (321)
T ss_dssp             CCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHH
T ss_pred             cCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHH
Confidence            99975544455678899999999999999999775 3 599999999999976  5667888764 45679999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+++.+.+++|++++++|++++....
T Consensus       161 ~~~~~~~~~~gi~~~ilrp~~v~g~~  186 (321)
T 2pk3_A          161 MLARQYVKAYGMDIIHTRTFNHIGPG  186 (321)
T ss_dssp             HHHHHHHHHHCCEEEEEEECEEECTT
T ss_pred             HHHHHHHHHcCCCEEEEEeCcccCcC
Confidence            99999998899999999999987654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.92  E-value=2.8e-24  Score=196.08  Aligned_cols=167  Identities=20%  Similarity=0.270  Sum_probs=137.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-c-----ccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-L-----LLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~-----~~~vD~vih~Ag  189 (290)
                      |+|+||||+||||++++++|+++ |++|++++|......    ......+++++.+|+.+. .     +.++|+||||||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS----RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG----GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH----HhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            58999999999999999999998 899999998643221    222345789999999873 2     246999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCCC--------CCChhhhhHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWG--------NVNPIGTYFFSFS  261 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~--------~~~py~~~k~~~e  261 (290)
                      ...+.....++..++++|+.++.+++++|++.+++||++||.++||.....+++|+.+.        +.++|+.+|...|
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e  156 (345)
T 2bll_A           77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (345)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             ccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHH
Confidence            75543344577889999999999999999988889999999999998776677777542        2347999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .++..+.++++++++++|++++.+..
T Consensus       157 ~~~~~~~~~~~~~~~ilrp~~v~G~~  182 (345)
T 2bll_A          157 RVIWAYGEKEGLQFTLFRPFNWMGPR  182 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSS
T ss_pred             HHHHHHHHhcCCCEEEEcCCcccCCC
Confidence            99999998889999999999986543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=4.5e-24  Score=194.48  Aligned_cols=172  Identities=21%  Similarity=0.195  Sum_probs=140.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhcccCCCCeEEEEccccccc-----cc--CCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih  186 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+..... +.+.......+++++.+|+++..     +.  ++|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            4679999999999999999999999999999999754332 12222222347889999998763     22  4799999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLI  263 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~  263 (290)
                      |||.........++..++++|+.|+.+++++|++.+  .+||++||.++||.....++.|+.+ .+.++|+.+|...|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            999754333456788999999999999999998876  4999999999999877777777653 4567899999999999


Q ss_pred             HHHHHHHhCCCeeEEEeeeeecc
Q 022900          264 FLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       264 ~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ++.+..+++++++++|+.++...
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gp  184 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESP  184 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECT
T ss_pred             HHHHHHHhCCceEeeeeeeecCC
Confidence            99999999999999999887554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=1.7e-24  Score=197.70  Aligned_cols=171  Identities=26%  Similarity=0.339  Sum_probs=134.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhcccCCCCeEEEEccccccc-----ccC--CCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPL-----LLE--VDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~-----~~~--vD~vih~  187 (290)
                      ||+|+||||+||||++++++|+++|++|++++|..... .+....+....+++++.+|+++..     +.+  +|+||||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            46899999999999999999999999999999854222 222222223346889999998763     334  9999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCC----------------CCCCC-CC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHP----------------QKETY-WG  248 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~----------------~~E~~-~~  248 (290)
                      ||.........++..++++|+.|+.+++++|++.+.  +||++||.++||.....+                .+|+. ..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            997443223457788999999999999999998773  899999999998654433                33433 24


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +.++|+.+|...|.+++.+.+++|++++++|++++...
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~  198 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGG  198 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCc
Confidence            56789999999999999999889999999999998764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=3.5e-24  Score=196.03  Aligned_cols=170  Identities=25%  Similarity=0.372  Sum_probs=138.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC------chhhhhccc--CCCCeEEEEccccccc-----cc--C
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG------RKENVMHHF--GNPNFELIRHDVVEPL-----LL--E  180 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~------~~~~~~~~~--~~~~v~~~~~D~~~~~-----~~--~  180 (290)
                      +|+|+||||+||||++++++|+++|++|++++|....      ..+....+.  ...+++++.+|+.+..     +.  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999999999986433      222222111  1356889999998763     33  7


Q ss_pred             CCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CC-CChhhhhH
Q 022900          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GN-VNPIGTYF  257 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~-~~py~~~k  257 (290)
                      +|+||||||.........++..++++|+.|+.+++++|++.+. +||++||.++||.....+++|+.+ .+ .++|+.+|
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            9999999997543334457788999999999999999998885 999999999999877778888764 34 67899999


Q ss_pred             HHHHHHHHHHHHHhC--CCeeEEEeeeeecc
Q 022900          258 FSFSLIFLVFISQFR--PSRKACRFFILLYR  286 (290)
Q Consensus       258 ~~~e~~~~~~~~~~g--l~~~ilR~~~lr~~  286 (290)
                      ...|.+++.+.++ +  ++++++|++++.+.
T Consensus       162 ~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          162 FFIEEMIRDLCQA-DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             HHHHHHHHHHHHH-CTTCEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHhc-CCCcceEEEeeccccCC
Confidence            9999999999877 5  99999999998765

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.92  E-value=4.8e-24  Score=194.48  Aligned_cols=170  Identities=24%  Similarity=0.393  Sum_probs=135.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc-----cc--CCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~-----~~--~vD~vih~  187 (290)
                      |+|+||||+||||++++++|+++|++|++++|......+....+.  ...++.++.+|++++.     +.  ++|+||||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            479999999999999999999999999999875433222221111  1346788999998763     22  59999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCC-C-CChhhhhHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWG-N-VNPIGTYFFSFSLIF  264 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~-~-~~py~~~k~~~e~~~  264 (290)
                      ||.........++..++++|+.|+.+++++|++.+. +||++||.++||.....++.|+.+. + .++|+.+|...|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            996543333456778899999999999999988875 9999999999998777777887643 3 679999999999999


Q ss_pred             HHHHHHh-CCCeeEEEeeeeecc
Q 022900          265 LVFISQF-RPSRKACRFFILLYR  286 (290)
Q Consensus       265 ~~~~~~~-gl~~~ilR~~~lr~~  286 (290)
                      +.+.+++ +++++++|++++.+.
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGA  183 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECC
T ss_pred             HHHHHhcCCCceEEEeeceecCC
Confidence            9998876 899999999988654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.91  E-value=4.2e-24  Score=196.48  Aligned_cols=174  Identities=19%  Similarity=0.186  Sum_probs=138.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih  186 (290)
                      +++|+|+||||+||||++++++|+++|++|++++|+...............+++++.+|+.+..     +.  ++|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            4678999999999999999999999999999999975443322221112457889999998763     23  3899999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCC-CCCCCCC-CCCCChhhhhHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-HPQKETY-WGNVNPIGTYFFSFSL  262 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~-~~~~E~~-~~~~~py~~~k~~~e~  262 (290)
                      |||.........++..++++|+.|+.+++++|++.+ . +||++||.++||.... .+..|+. ..+.++|+.+|...|.
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            999643333345678899999999999999998875 4 9999999999997654 3566654 3567899999999999


Q ss_pred             HHHHHHHHh---------CCCeeEEEeeeeeccc
Q 022900          263 IFLVFISQF---------RPSRKACRFFILLYRN  287 (290)
Q Consensus       263 ~~~~~~~~~---------gl~~~ilR~~~lr~~~  287 (290)
                      +++.+.+++         +++++++|++++.+.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~  200 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  200 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceeeCCC
Confidence            999998765         9999999999997653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=1e-23  Score=196.06  Aligned_cols=169  Identities=22%  Similarity=0.235  Sum_probs=137.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      .++|+|+||||+||||++++++|+++|++|++++|........     ...+++++.+|+.+..     +.++|+|||||
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A  101 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA  101 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----ccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence            4678999999999999999999999999999999865332211     1246888999998753     46799999999


Q ss_pred             cCCCCCCC-CCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC-----CCCCCCC---CCCCChhhhhHH
Q 022900          189 CPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-----HPQKETY---WGNVNPIGTYFF  258 (290)
Q Consensus       189 g~~~~~~~-~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~-----~~~~E~~---~~~~~py~~~k~  258 (290)
                      |......+ ..++..++++|+.|+.+++++|++.+. +||++||.++||....     .++.|+.   ..+.++|+.+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            97543222 567889999999999999999999885 9999999999985432     3455653   345678999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.+++.+.++++++++++|++++....
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~  210 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPF  210 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcC
Confidence            99999999998899999999999987653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.9e-23  Score=190.52  Aligned_cols=164  Identities=10%  Similarity=0.030  Sum_probs=127.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag  189 (290)
                      .+|+|+||||+||||++++++|+++|++|++++|+.....+ +    ...+++++.+|+.+..     +.++|+||||||
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-L----AYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-G----GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-h----ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            44699999999999999999999999999999986543321 1    1236888999998753     567999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC--CCCCCCCC-CC----CChhhhhHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ--HPQKETYW-GN----VNPIGTYFFSFS  261 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~--~~~~E~~~-~~----~~py~~~k~~~e  261 (290)
                      ...  ....++...+++|+.++.+++++|++.+. +||++||.++||....  .+ +|+.+ .+    .++|+.+|...|
T Consensus        87 ~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e  163 (342)
T 2x4g_A           87 YYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALD  163 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHH
T ss_pred             cCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHH
Confidence            643  23456778999999999999999999885 9999999999987554  34 55543 44    678999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+++.+.+. |++++++|++++....
T Consensus       164 ~~~~~~~~~-g~~~~ilrp~~v~g~~  188 (342)
T 2x4g_A          164 EQAREQARN-GLPVVIGIPGMVLGEL  188 (342)
T ss_dssp             HHHHHHHHT-TCCEEEEEECEEECSC
T ss_pred             HHHHHHhhc-CCcEEEEeCCceECCC
Confidence            999999887 9999999999987653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=1.1e-23  Score=196.15  Aligned_cols=171  Identities=23%  Similarity=0.342  Sum_probs=138.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HCCCeEEEEeCCCCCc--------hhhhh----cccC---CCC---eEEEEcccccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLI-ARGDSVIVVDNFFTGR--------KENVM----HHFG---NPN---FELIRHDVVEP  176 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~-~~G~~V~~~~r~~~~~--------~~~~~----~~~~---~~~---v~~~~~D~~~~  176 (290)
                      +|+|+||||+||||++++++|+ ++|++|++++|.....        .+.+.    ....   ..+   ++++.+|+.+.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 9999999999865432        22221    1111   124   88999999876


Q ss_pred             c-----cc--C-CCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCC-------CC
Q 022900          177 L-----LL--E-VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-------QH  240 (290)
Q Consensus       177 ~-----~~--~-vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~-------~~  240 (290)
                      .     +.  + +|+||||||.........++..++++|+.|+.+++++|++.+. +||++||.++||...       ..
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            3     23  4 9999999997543333457788999999999999999998885 999999999998765       56


Q ss_pred             CCCCCCC-CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          241 PQKETYW-GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       241 ~~~E~~~-~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +++|+.+ .+.++|+.+|...|.+++.+.++++++++++|++++.+.
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~  208 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGA  208 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECC
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCC
Confidence            7777764 456789999999999999999989999999999998755

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=6.3e-24  Score=191.70  Aligned_cols=165  Identities=30%  Similarity=0.480  Sum_probs=135.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~Ag  189 (290)
                      |+|+||||+||||++++++|+++|++|++++|......+.+     ..+++++.+|++++.     +.  ++|+||||||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            47999999999999999999999999999988543322221     135778889998763     33  7999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCC-ccccC-CCCCCCCCCCC-CCCChhhhhHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGD-PLQHPQKETYW-GNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~-~vyg~-~~~~~~~E~~~-~~~~py~~~k~~~e~~~~  265 (290)
                      .........++...+++|+.|+.+++++|++.+. +||++||. ++||. ....+..|+.+ .+.++|+.+|...|.+++
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  155 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLS  155 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Confidence            6543334457788999999999999999998885 99999999 89987 55567777654 456789999999999999


Q ss_pred             HHHHHhCCCeeEEEeeeeecc
Q 022900          266 VFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      .+.++++++++++||+++.+.
T Consensus       156 ~~~~~~~~~~~~lrp~~v~Gp  176 (311)
T 2p5y_A          156 VYGQSYGLKWVSLRYGNVYGP  176 (311)
T ss_dssp             HHHHHHCCCEEEEEECEEECT
T ss_pred             HHHHHcCCCEEEEeeccccCc
Confidence            999889999999999998764

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-23  Score=195.05  Aligned_cols=170  Identities=24%  Similarity=0.222  Sum_probs=136.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc------CCCCeEEEEccccccc-----cc--CCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF------GNPNFELIRHDVVEPL-----LL--EVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~------~~~~v~~~~~D~~~~~-----~~--~vD  182 (290)
                      |+|+||||+||||.+++++|+++|++|++++|..... .+.+....      ...+++++.+|+.+..     +.  ++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999875431 11121111      2346889999998763     22  479


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC----CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYF  257 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~----~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k  257 (290)
                      +||||||.........++...+++|+.|+.+++++|++.+    .+||++||.++||.....+++|+.+ .+.++|+.+|
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            9999999754332345678899999999999999999877    4999999999999877777778753 4567999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          258 FSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       258 ~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ...|.+++.+.++++++++++|++++.+.
T Consensus       185 ~~~e~~~~~~~~~~~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          185 LYAYWIVVNFREAYNLFAVNGILFNHESP  213 (375)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecccccCC
Confidence            99999999999999999999999987543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.91  E-value=1.7e-23  Score=190.85  Aligned_cols=165  Identities=23%  Similarity=0.348  Sum_probs=131.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQI  184 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~v  184 (290)
                      ...++|+|+||||+||||++++++|+++|++|++++|+.....+....+   .+++++.+|+++..     +.  ++|+|
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l---~~v~~~~~Dl~d~~~~~~~~~~~~~D~v   92 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV---AGLSVIEGSVTDAGLLERAFDSFKPTHV   92 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC---TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc---CCceEEEeeCCCHHHHHHHHhhcCCCEE
Confidence            4467889999999999999999999999999999999654333211111   57889999998763     34  89999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCC--CCCCCCCCCCChhhhhHHHHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH--PQKETYWGNVNPIGTYFFSFS  261 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~--~~~E~~~~~~~py~~~k~~~e  261 (290)
                      |||||..... ...++.  +++|+.|+.+++++|.+.+. +||++||.++||.....  +++|+. .+.++|+.+|...|
T Consensus        93 ih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~-~~~~~Y~~sK~~~e  168 (330)
T 2pzm_A           93 VHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT-APFTSYGISKTAGE  168 (330)
T ss_dssp             EECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC-CCCSHHHHHHHHHH
T ss_pred             EECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC-CCCChHHHHHHHHH
Confidence            9999975432 223344  89999999999999998885 99999999999876544  777776 66789999999888


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+++.+    +++++++|++++...+
T Consensus       169 ~~~~~~----~~~~~~iR~~~v~gp~  190 (330)
T 2pzm_A          169 AFLMMS----DVPVVSLRLANVTGPR  190 (330)
T ss_dssp             HHHHTC----SSCEEEEEECEEECTT
T ss_pred             HHHHHc----CCCEEEEeeeeeECcC
Confidence            877665    8999999998886543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=8.1e-24  Score=197.37  Aligned_cols=173  Identities=20%  Similarity=0.173  Sum_probs=133.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch----------------hhhhcc--cCCCCeEEEEccccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK----------------ENVMHH--FGNPNFELIRHDVVE  175 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------~~~~~~--~~~~~v~~~~~D~~~  175 (290)
                      ..+++|+||||+||||++++++|+++|++|++++|......                +.+...  ....+++++.+|+++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            56889999999999999999999999999999987532110                011110  113578899999987


Q ss_pred             cc-----ccC--CCEEEEcccCCCCCCCCCChH---HHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCCCCCCC
Q 022900          176 PL-----LLE--VDQIYHLACPASPVHYKFNPV---KTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQK  243 (290)
Q Consensus       176 ~~-----~~~--vD~vih~Ag~~~~~~~~~~~~---~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~~~~~~  243 (290)
                      ..     +.+  +|+||||||.........++.   .++++|+.|+.+++++|++.+  ++||++||.++||... .++.
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~  167 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIE  167 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBC
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCC
Confidence            64     334  999999999754333334543   478999999999999999877  4999999999998764 4566


Q ss_pred             CC---------------CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          244 ET---------------YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       244 E~---------------~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |+               ...+.++|+.+|...|.++..+.+++|++++++||+++.+..
T Consensus       168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK  226 (404)
T ss_dssp             SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCC
Confidence            64               334567899999999999999988889999999999997754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.91  E-value=3.7e-23  Score=190.81  Aligned_cols=170  Identities=26%  Similarity=0.274  Sum_probs=134.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc-----CCCCeEEEEccccccc-----cc--CCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF-----GNPNFELIRHDVVEPL-----LL--EVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~-----~~~~v~~~~~D~~~~~-----~~--~vD  182 (290)
                      ||+|+||||+||||++++++|+++|++|++++|+.... .+.+....     ...+++++.+|+++..     +.  ++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999864321 11122111     1246888999998763     22  479


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC----CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYF  257 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~----~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k  257 (290)
                      +||||||.........++...+++|+.|+.+++++|++.+    .+||++||.++||.....+++|+.+ .+.++|+.+|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            9999999765544566788899999999999999999877    4999999999999876667777764 4567999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEeeeeec
Q 022900          258 FSFSLIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       258 ~~~e~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      ...|.+++.+.++++++++++|++++..
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~g  188 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHES  188 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCccC
Confidence            9999999999999999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=3.1e-23  Score=190.57  Aligned_cols=171  Identities=25%  Similarity=0.347  Sum_probs=136.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCC-CchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~  187 (290)
                      |+|+||||+||||+++++.|+++ |++|++++|... ...+.+.......+++++.+|+++..     +.  ++|+||||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 799999998642 22233333323457999999998763     33  79999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc--C-C-------eEEEEcCCccccCCCC--C--------CCCCCCC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--G-A-------RFLLTSTSEVYGDPLQ--H--------PQKETYW  247 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~-~-------riV~vSS~~vyg~~~~--~--------~~~E~~~  247 (290)
                      ||.........+++.++++|+.|+.+++++|.+.  + +       +||++||.++||....  .        +++|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            9975432234567889999999999999999876  5 3       9999999999986542  1        5666653


Q ss_pred             -CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          248 -GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       248 -~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                       .+.++|+.+|...|.+++.+..+++++++++|++++....
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~  201 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTT
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCC
Confidence             4567999999999999999998899999999999987653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.90  E-value=1.6e-23  Score=191.32  Aligned_cols=169  Identities=23%  Similarity=0.322  Sum_probs=138.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-------CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----c-cC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-------DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L-LE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~-~~  180 (290)
                      +++|+|+||||+||||++++++|+++|       ++|++++|......+     ....+++++.+|+.++.     + .+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~   86 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVEAR   86 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHhcC
Confidence            577899999999999999999999999       899999986433221     12356889999998763     3 47


Q ss_pred             CCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC------CeEEEEcCCccccCCCCCCCCCCCC-CCCChh
Q 022900          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG------ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPI  253 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~------~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py  253 (290)
                      +|+||||||.... ....++..++++|+.|+.+++++|++.+      .+||++||.++||.....+++|+.+ .+.++|
T Consensus        87 ~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y  165 (342)
T 2hrz_A           87 PDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSY  165 (342)
T ss_dssp             CSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHH
T ss_pred             CCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchH
Confidence            9999999996431 2245678899999999999999998765      4999999999999765567777764 456789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          254 GTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      +.+|...|.++..+.++++++.+++|+.++-++.|
T Consensus       166 ~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg  200 (342)
T 2hrz_A          166 GTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPG  200 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCS
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCC
Confidence            99999999999999988899999999998876444

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.90  E-value=2.5e-23  Score=189.31  Aligned_cols=169  Identities=22%  Similarity=0.204  Sum_probs=132.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEE-Eccccccc-----ccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELI-RHDVVEPL-----LLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~-~~D~~~~~-----~~~vD~v  184 (290)
                      .++|+|+||||+||||++++++|+++|++|++++|+..... .+...+   ...+++++ .+|+++..     +.++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            56789999999999999999999999999999998532211 111111   12568888 79998753     3479999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH-cC-CeEEEEcCCccccCCCC----CCCCCCCCC----------
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR-VG-ARFLLTSTSEVYGDPLQ----HPQKETYWG----------  248 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~-~~-~riV~vSS~~vyg~~~~----~~~~E~~~~----------  248 (290)
                      |||||....   ..++.+++++|+.|+.+++++|.+ .+ ++||++||.++|+....    .+++|+.|.          
T Consensus        88 ih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  164 (342)
T 1y1p_A           88 AHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             EEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence            999997432   357888999999999999999985 45 49999999999864322    567777642          


Q ss_pred             -------CCChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeeeecc
Q 022900          249 -------NVNPIGTYFFSFSLIFLVFISQF--RPSRKACRFFILLYR  286 (290)
Q Consensus       249 -------~~~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~lr~~  286 (290)
                             +.++|+.+|...|.+++.+.+++  +++++++|++++...
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~  211 (342)
T 1y1p_A          165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGT  211 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECC
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECC
Confidence                   33579999999999999998876  678899999998654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=3.7e-23  Score=188.86  Aligned_cols=163  Identities=23%  Similarity=0.304  Sum_probs=127.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccC--CCEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLE--VDQI  184 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~--vD~v  184 (290)
                      ...++|+|+||||+||||++++++|+++|++|++++|......+.+...   .+++++.+|+.+..     +.+  +|+|
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~D~v   93 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH---PNLTFVEGSIADHALVNQLIGDLQPDAV   93 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc---CCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence            4467899999999999999999999999999999998754433322221   57889999998763     334  9999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCcccc----CCCCCCCCCCCCCCC-ChhhhhHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG----DPLQHPQKETYWGNV-NPIGTYFF  258 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg----~~~~~~~~E~~~~~~-~py~~~k~  258 (290)
                      |||||..... ...+++  +++|+.|+.+++++|.+.+. +||++||.++||    .... +++|+. .+. ++|+.+|.
T Consensus        94 ih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-~p~~~~Y~~sK~  168 (333)
T 2q1w_A           94 VHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR-NPANSSYAISKS  168 (333)
T ss_dssp             EECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-CCTTCHHHHHHH
T ss_pred             EECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC-CCCCCchHHHHH
Confidence            9999975432 223333  89999999999999999885 999999999998    5555 778876 566 89999999


Q ss_pred             HHHHHHHH-HHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLV-FISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~-~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.+++. +.     +++++|++++...+
T Consensus       169 ~~E~~~~~s~~-----~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          169 ANEDYLEYSGL-----DFVTFRLANVVGPR  193 (333)
T ss_dssp             HHHHHHHHHTC-----CEEEEEESEEESTT
T ss_pred             HHHHHHHhhhC-----CeEEEeeceEECcC
Confidence            88887766 44     89999999886543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.90  E-value=2.5e-23  Score=189.74  Aligned_cols=169  Identities=21%  Similarity=0.257  Sum_probs=124.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh--hhhcccCCCCeEEEEccccccc-----ccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      +|+|+||||+||||++|+++|+++|++|++++|+......  .+.......+++++.+|+.++.     +.++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            6899999999999999999999999999998886433211  1111111246888999998753     45799999999


Q ss_pred             cCCCCCCCCCCh-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCc-cccCCC---CCCCCCCCCCC------CC----
Q 022900          189 CPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE-VYGDPL---QHPQKETYWGN------VN----  251 (290)
Q Consensus       189 g~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~-vyg~~~---~~~~~E~~~~~------~~----  251 (290)
                      |...  ....++ .+++++|+.|+.+++++|++.+ . +||++||.+ +|+...   ..+++|+.|.+      .+    
T Consensus        89 ~~~~--~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           89 TPVH--FASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SCCC--C---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             CccC--CCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            9642  122333 3488999999999999999885 4 999999987 454321   13677776432      12    


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|+.+|...|.++..+.+++|++++++||+++.+.
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp  201 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGS  201 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESC
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECC
Confidence            59999999999999988888999999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=7.7e-23  Score=186.56  Aligned_cols=170  Identities=19%  Similarity=0.204  Sum_probs=127.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh--hhhcccC-CCCeEEEEccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFG-NPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+......  .+..... ..+++++.+|+++..     +.++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999886432211  1111101 135888999998753     457999999


Q ss_pred             cccCCCCCCCCCCh-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCc-cccCCC-CCCCCCCCCC----------CCC
Q 022900          187 LACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE-VYGDPL-QHPQKETYWG----------NVN  251 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~-vyg~~~-~~~~~E~~~~----------~~~  251 (290)
                      +|+..  .....++ ..++++|+.|+.+++++|++.+ . +||++||.+ +|+... ..+++|+.+.          +..
T Consensus        84 ~A~~~--~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (337)
T 2c29_D           84 VATPM--DFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW  161 (337)
T ss_dssp             CCCCC--CSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             ecccc--CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence            99864  1222344 3589999999999999998876 4 999999987 565432 2346676543          234


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|+.+|...|.++..+.+.+|++++++||+++.+.
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp  196 (337)
T 2c29_D          162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGP  196 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESC
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECC
Confidence            79999999999998888878999999999998654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=6.4e-24  Score=183.09  Aligned_cols=160  Identities=18%  Similarity=0.096  Sum_probs=127.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag  189 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|+......    .  ..+++++.+|+++..     +.++|+||||||
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   76 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI----E--NEHLKVKKADVSSLDEVCEVCKGADAVISAFN   76 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC----C--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh----c--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence            35799999999999999999999999999999986432211    1  267899999998763     567999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ...      +..+.+++|+.++.+++++|++.+. +||++||.++|+.....+..|....+.++|+.+|...|.+++.+.
T Consensus        77 ~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  150 (227)
T 3dhn_A           77 PGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLM  150 (227)
T ss_dssp             C------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGG
T ss_pred             CCC------CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence            531      1223678999999999999999885 999999999775444444445555667889999999999899998


Q ss_pred             HHhCCCeeEEEeeeeecc
Q 022900          269 SQFRPSRKACRFFILLYR  286 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~  286 (290)
                      ++++++++++||+++...
T Consensus       151 ~~~~~~~~ilrp~~v~g~  168 (227)
T 3dhn_A          151 KEKEIDWVFFSPAADMRP  168 (227)
T ss_dssp             GCCSSEEEEEECCSEEES
T ss_pred             hccCccEEEEeCCcccCC
Confidence            788999999999998654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.90  E-value=5.6e-23  Score=189.08  Aligned_cols=166  Identities=23%  Similarity=0.358  Sum_probs=130.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----ccc-----CCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL-----EVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~-----~vD  182 (290)
                      .++|+|+||||+||||++|+++|+++| ++|++++|......  .... .  ++. +.+|+.++     .+.     ++|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~-~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL-V--DLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT-T--TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc-c--Cce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            456889999999999999999999999 89999998643321  1111 1  111 44555443     233     599


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFS  261 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e  261 (290)
                      +||||||....  ...+++.++++|+.|+.+++++|++.+.+||++||.++||.....+++|+.. .+.++|+.+|...|
T Consensus       118 ~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E  195 (357)
T 2x6t_A          118 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFD  195 (357)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHH
T ss_pred             EEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHH
Confidence            99999997543  4567889999999999999999998777999999999999877667777653 45678999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+++.+.++++++++++|++++.+..
T Consensus       196 ~~~~~~~~~~g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          196 EYVRQILPEANSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSS
T ss_pred             HHHHHHHHHcCCCEEEEecCeEECCC
Confidence            99999988889999999999997553

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.90  E-value=3.2e-23  Score=183.42  Aligned_cols=157  Identities=19%  Similarity=0.180  Sum_probs=131.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~  190 (290)
                      +|+|+||||+||||++++++|+++|++|++++|+.....        ..+++++.+|+.++.     +.++|+||||||.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------CCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            468999999999999999999999999999998643211        135788889998763     4579999999996


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCC-CCCCCCCCCC-CCCChhhhhHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETYW-GNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~-~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~  267 (290)
                      .    ...++...+++|+.++.+++++|++.+. +||++||.++|+.. ...+++|+.+ .+..+|+.+|...|.+++.+
T Consensus        74 ~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  149 (267)
T 3ay3_A           74 S----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLY  149 (267)
T ss_dssp             C----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             C----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            4    3456788999999999999999998885 99999999999864 3456777653 45678999999999999998


Q ss_pred             HHHhCCCeeEEEeeeee
Q 022900          268 ISQFRPSRKACRFFILL  284 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr  284 (290)
                      .++++++++++|++++.
T Consensus       150 ~~~~gi~~~~lrp~~v~  166 (267)
T 3ay3_A          150 YHKFDIETLNIRIGSCF  166 (267)
T ss_dssp             HHTTCCCEEEEEECBCS
T ss_pred             HHHcCCCEEEEeceeec
Confidence            88889999999999874

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=1.1e-22  Score=182.68  Aligned_cols=161  Identities=24%  Similarity=0.371  Sum_probs=129.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCch-hhhhcccCCCCeEEEEcccccc-----ccc-----CCCEEE
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEP-----LLL-----EVDQIY  185 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~v~~~~~D~~~~-----~~~-----~vD~vi  185 (290)
                      +|+||||+||||++++++|+++| ++|++++|...... ..+..      +. +.+|+.+.     .+.     ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD------LN-IADYMDKEDFLIQIMAGEEFGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT------SC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCc------ce-eccccccHHHHHHHHhccccCCCcEEE
Confidence            48999999999999999999999 89999998643321 11111      11 34455443     333     499999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~  264 (290)
                      ||||....  ...++..++++|+.|+.+++++|++.+.+||++||.++||.....+++|+.. .+.++|+.+|...|.++
T Consensus        74 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           74 HEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             ECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             ECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            99997543  4567889999999999999999998777999999999999877667777653 55678999999999999


Q ss_pred             HHHHHHhCCCeeEEEeeeeeccc
Q 022900          265 LVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +.+.+++|++++++|++++.+..
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~  174 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPR  174 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSS
T ss_pred             HHHHHHcCCCEEEEeCCcEECcC
Confidence            99988889999999999987653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.89  E-value=3.6e-23  Score=186.28  Aligned_cols=163  Identities=17%  Similarity=0.169  Sum_probs=133.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih  186 (290)
                      +|+|+||||+||||++++++|+++  |++|++++|......  ..     .+++++.+|+.+..     +.  ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VV-----NSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HH-----HSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--cc-----CCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            468999999999999999999999  899999998653321  11     24678889998753     33  7999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC-CCCCCCC-CCCCChhhhhHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-HPQKETY-WGNVNPIGTYFFSFSLI  263 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~-~~~~E~~-~~~~~py~~~k~~~e~~  263 (290)
                      |||.... ....++...+++|+.++.+++++|++.+. +||++||.++||.... .+.+|+. ..+.++|+.+|...|.+
T Consensus        75 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  153 (312)
T 2yy7_A           75 MAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERW  153 (312)
T ss_dssp             CCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHH
T ss_pred             CCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHH
Confidence            9996432 23457788999999999999999999886 9999999999987443 4555654 35678999999999999


Q ss_pred             HHHHHHHhCCCeeEEEeeeeecc
Q 022900          264 FLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       264 ~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      ++.+.++++++++++|++++.+.
T Consensus       154 ~~~~~~~~~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          154 CEYYHNIYGVDVRSIRYPGLISW  176 (312)
T ss_dssp             HHHHHHHHCCEEECEEECEEECS
T ss_pred             HHHHHHhcCCcEEEEeCCeEecC
Confidence            99999889999999999998773

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.89  E-value=1.2e-22  Score=201.99  Aligned_cols=170  Identities=20%  Similarity=0.268  Sum_probs=140.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih  186 (290)
                      .++|+|+||||+||||++++++|+++ |++|++++|+......    .....+++++.+|+.+..      +.++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            46789999999999999999999998 8999999986543222    223457899999998742      236999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC--------CCCChhhhhHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW--------GNVNPIGTYFF  258 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~--------~~~~py~~~k~  258 (290)
                      |||...+..+..++...+++|+.|+.+++++|++.+++||++||.++||.....+++|+.+        .+.++|+.+|.
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHH
Confidence            9997654444567888999999999999999998888999999999999877777778764        23457999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.+++.+.++++++++++|++++.+..
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~  497 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPR  497 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTT
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCC
Confidence            99999999988889999999999997643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.89  E-value=6.7e-23  Score=196.71  Aligned_cols=169  Identities=20%  Similarity=0.192  Sum_probs=137.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC---CCeEEEEeCCCCCch--hhhhcccC--------------CCCeEEEEcccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR---GDSVIVVDNFFTGRK--ENVMHHFG--------------NPNFELIRHDVV  174 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~---G~~V~~~~r~~~~~~--~~~~~~~~--------------~~~v~~~~~D~~  174 (290)
                      .++|+|+||||+||||.+|+++|+++   |++|++++|......  +.+...+.              ..+++++.+|+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            57899999999999999999999999   899999999643221  11111111              258999999998


Q ss_pred             ccc-----------ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCC
Q 022900          175 EPL-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       175 ~~~-----------~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~  242 (290)
                      ++.           +.++|+||||||....    .++...+++|+.|+.+++++|++.+. +||++||.++|+.....++
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~  226 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAF  226 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTC
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCc
Confidence            553           2469999999997533    56667889999999999999999885 9999999999998777777


Q ss_pred             CCCCC-CCC-----------ChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          243 KETYW-GNV-----------NPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       243 ~E~~~-~~~-----------~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      .|+.. .+.           +.|+.+|+..|.+++.+.+++|++++++|++++.+.
T Consensus       227 ~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD  282 (478)
T ss_dssp             CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECC
T ss_pred             CCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCC
Confidence            77652 222           339999999999999999988999999999999764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.89  E-value=5e-23  Score=184.68  Aligned_cols=158  Identities=19%  Similarity=0.148  Sum_probs=127.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih  186 (290)
                      +++|+|+||||+||||++|+++|+++|+      +.  ..  .      ...++.+.+|+++..     +.  ++|+|||
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~--~~--~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih   67 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LP--GE--D------WVFVSSKDADLTDTAQTRALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CT--TC--E------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cc--cc--c------ccccCceecccCCHHHHHHHHhhcCCCEEEE
Confidence            5788999999999999999999999997      10  00  0      012233456776653     33  3999999


Q ss_pred             cccCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC-----CCCCC-hhhhhHH
Q 022900          187 LACPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY-----WGNVN-PIGTYFF  258 (290)
Q Consensus       187 ~Ag~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~-----~~~~~-py~~~k~  258 (290)
                      |||.... .....++...+++|+.|+.+++++|++.++ +|||+||.++||.....+++|+.     ..+.+ +|+.+|.
T Consensus        68 ~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~  147 (319)
T 4b8w_A           68 LAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKR  147 (319)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHH
T ss_pred             CceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHH
Confidence            9997432 234567888999999999999999999985 89999999999988888888885     23334 6999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.+++.+.++++++++++|++++.+.+
T Consensus       148 ~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~  176 (319)
T 4b8w_A          148 MIDVQNRAYFQQYGCTFTAVIPTNVFGPH  176 (319)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHhhCCCEEEEeeccccCCC
Confidence            99999999999999999999999997654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.89  E-value=1.9e-23  Score=186.30  Aligned_cols=146  Identities=18%  Similarity=0.150  Sum_probs=123.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----ccc--CCCEEEEcccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLACP  190 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~--~vD~vih~Ag~  190 (290)
                      +|+||||+||||+++++.|+++|++|++++|.                    .+|+.+.     .+.  ++|+||||||.
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------LLDITNISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------TSCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------ccCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            89999999999999999999999999999872                    1455443     233  69999999998


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      ........++...+++|+.|+.+++++|++.+.+||++||.++||.....++.|+. ..+.++|+.+|...|.+++.+  
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~--  144 (287)
T 3sc6_A           67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKEL--  144 (287)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH--
T ss_pred             cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh--
Confidence            66555567889999999999999999999988899999999999988878888876 356678999999888877654  


Q ss_pred             HhCCCeeEEEeeeeeccc
Q 022900          270 QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~~  287 (290)
                        +.+++++|++++.+.+
T Consensus       145 --~~~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          145 --HNKYFIVRTSWLYGKY  160 (287)
T ss_dssp             --CSSEEEEEECSEECSS
T ss_pred             --CCCcEEEeeeeecCCC
Confidence              4478999999987653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=1.6e-22  Score=187.64  Aligned_cols=169  Identities=18%  Similarity=0.169  Sum_probs=134.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhcccC-----CC-CeEEEEccccccc-----cc--CCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHFG-----NP-NFELIRHDVVEPL-----LL--EVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~-----~~-~v~~~~~D~~~~~-----~~--~vD  182 (290)
                      |+|+||||+||||.++++.|+++|++|++++|...... +.+.....     .. +++++.+|+.+..     +.  ++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            79999999999999999999999999999998754311 11111111     12 7889999998763     22  479


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC------CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhh
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG------ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGT  255 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~------~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~  255 (290)
                      +||||||.........++...+++|+.|+.+++++|.+.+      .+||++||.++||.... +++|+.+ .+.++|+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAA  187 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHH
Confidence            9999999754332345678899999999999999998754      29999999999997666 7777753 55688999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          256 YFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|...|.++..+..+++++++++|++++...
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp  218 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILFNHESP  218 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeCceeCC
Confidence            9999999999999999999999999887653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=3.1e-22  Score=180.94  Aligned_cols=169  Identities=21%  Similarity=0.205  Sum_probs=122.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC-CCCC--chhhhhcccC-CCCeEEEEccccccc-----ccCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN-FFTG--RKENVMHHFG-NPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~--~~~~~~~~~~-~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      +|+|+||||+||||++++++|+++|++|++++| +...  ....+..... ..+++++.+|++++.     +.++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999987 4321  1111111100 125788889998763     457999999


Q ss_pred             cccCCCCCCCCCC-hHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcCCcc-ccCCC-CCCCCCCCCCC---------CC-
Q 022900          187 LACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEV-YGDPL-QHPQKETYWGN---------VN-  251 (290)
Q Consensus       187 ~Ag~~~~~~~~~~-~~~~~~~Nv~gt~~ll~a~~~~-~~-riV~vSS~~v-yg~~~-~~~~~E~~~~~---------~~-  251 (290)
                      ||+..  .....+ ..+++++|+.|+.+++++|++. +. +||++||.++ |+... ..+++|+.|.+         .. 
T Consensus        81 ~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~  158 (322)
T 2p4h_X           81 TASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGW  158 (322)
T ss_dssp             CCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             cCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccc
Confidence            99753  112223 3458999999999999999987 54 9999999874 44322 23566665421         22 


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      +|+.+|...|.++..+.+.+|++++++||+++...
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~  193 (322)
T 2p4h_X          159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGR  193 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESC
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECC
Confidence            69999999999999888888999999999998654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=2.6e-22  Score=181.28  Aligned_cols=153  Identities=19%  Similarity=0.182  Sum_probs=101.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~A  188 (290)
                      +|+|+||||+||||++++++|+++|++|++++|+...           .+  ++.+|+.+..     +.  ++|+|||||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            5789999999999999999999999999999875321           11  5667776653     33  489999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~  267 (290)
                      |.........++..++++|+.|+.+++++|.+.+.+||++||.++|+. ...+++|+.+ .+.++|+.+|...|.+++.+
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence            975544445677889999999999999999988889999999999987 4567777763 45678999999888776654


Q ss_pred             HHHhCCCeeEEEeeeeecc
Q 022900          268 ISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr~~  286 (290)
                          +.+++++|++++.+.
T Consensus       148 ----~~~~~~lR~~~v~G~  162 (315)
T 2ydy_A          148 ----NLGAAVLRIPILYGE  162 (315)
T ss_dssp             ----CTTCEEEEECSEECS
T ss_pred             ----CCCeEEEeeeeeeCC
Confidence                678899999998754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=6.3e-23  Score=185.61  Aligned_cols=154  Identities=18%  Similarity=0.249  Sum_probs=126.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----ccc--CCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~--~vD~vih~  187 (290)
                      ++|+|+||||+||||++++++|+++|++|++++|..                   .+|+.+.     .+.  ++|+||||
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~~~d~vih~   62 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYLA   62 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------cCCccCHHHHHHHHHhcCCCEEEEc
Confidence            357899999999999999999999999999987641                   1355443     344  79999999


Q ss_pred             ccCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-----CCC-ChhhhhHHH
Q 022900          188 ACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-----GNV-NPIGTYFFS  259 (290)
Q Consensus       188 Ag~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-----~~~-~py~~~k~~  259 (290)
                      ||..... ....++...+++|+.++.+++++|++.+. +||++||.++||.....++.|+.+     .+. ++|+.+|..
T Consensus        63 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  142 (321)
T 1e6u_A           63 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  142 (321)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             CeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHH
Confidence            9964321 13456788999999999999999999886 999999999999877778888752     232 489999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          260 FSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       260 ~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .|.+++.+.++++++++++|++++.+..
T Consensus       143 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~  170 (321)
T 1e6u_A          143 GIKLCESYNRQYGRDYRSVMPTNLYGPH  170 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTT
T ss_pred             HHHHHHHHHHHhCCCEEEEEeCCcCCcC
Confidence            9999999998889999999999987654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=1.4e-22  Score=186.47  Aligned_cols=164  Identities=20%  Similarity=0.271  Sum_probs=132.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHC-CC-eEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQI  184 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~v  184 (290)
                      ...++|+|+||||+||||++++++|+++ |+ +|++++|+..... .+...+...++.++.+|+.+..     +.++|+|
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS-EMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHH-HHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHH-HHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            4467899999999999999999999999 97 9999998532221 1222223467999999998763     4689999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLI  263 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~  263 (290)
                      |||||.......+.++.+.+++|+.|+.+++++|.+.+. +||++||...|.             +.++|+.+|...|.+
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~-------------p~~~Y~~sK~~~E~~  162 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN-------------PINLYGATKLCSDKL  162 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS-------------CCSHHHHHHHHHHHH
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC-------------CccHHHHHHHHHHHH
Confidence            999997543334567788999999999999999999885 999999976652             457999999999999


Q ss_pred             HHHHHHH---hCCCeeEEEeeeeecccCC
Q 022900          264 FLVFISQ---FRPSRKACRFFILLYRNGA  289 (290)
Q Consensus       264 ~~~~~~~---~gl~~~ilR~~~lr~~~~~  289 (290)
                      ++.+...   .+++++++|++++...+|+
T Consensus       163 ~~~~~~~~~~~g~~~~~vRpg~v~g~~~~  191 (344)
T 2gn4_A          163 FVSANNFKGSSQTQFSVVRYGNVVGSRGS  191 (344)
T ss_dssp             HHHGGGCCCSSCCEEEEECCCEETTCTTS
T ss_pred             HHHHHHHhCCCCcEEEEEEeccEECCCCC
Confidence            9888764   5899999999999876553

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.88  E-value=3.4e-22  Score=180.43  Aligned_cols=157  Identities=24%  Similarity=0.303  Sum_probs=128.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEcc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLA  188 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~A  188 (290)
                      +|+||||+||||++++++|+++  |++|++++|......          +++++.+|+.+..     +.  ++|+|||||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            4899999999999999999998  899999988543211          4567889998763     33  799999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCC-CCCCCCCC-CCCCChhhhhHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-QHPQKETY-WGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~-~~~~~E~~-~~~~~py~~~k~~~e~~~~  265 (290)
                      |.... ....++..++++|+.|+.+++++|++.+. +||++||.++||... ..+.+|+. ..+.++|+.+|...|.+++
T Consensus        71 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (317)
T 3ajr_A           71 GILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQ  149 (317)
T ss_dssp             CCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHH
Confidence            96432 22356788999999999999999999886 999999999998643 33455544 3467899999999999999


Q ss_pred             HHHHHhCCCeeEEEeeeeec
Q 022900          266 VFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~lr~  285 (290)
                      .+.++++++++++|+.++.+
T Consensus       150 ~~~~~~~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          150 YYYEKFGLDVRSLRYPGIIS  169 (317)
T ss_dssp             HHHHHHCCEEEEEEECEEEC
T ss_pred             HHHHhcCCeEEEEecCcEec
Confidence            99888999999999888765

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.88  E-value=1.4e-22  Score=181.53  Aligned_cols=150  Identities=19%  Similarity=0.118  Sum_probs=122.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~Ag  189 (290)
                      |+|+||||+||||++++++|+ +|++|++++|...                .+.+|+.+..     +.  ++|+||||||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~   63 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhcCCCEEEECcc
Confidence            479999999999999999999 8999999988531                2345666542     33  3999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      .........++...+++|+.|+.+++++|++.+++||++||.++||.....++.|+.+ .+.++|+.+|...|.+++.+ 
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-  142 (299)
T 1n2s_A           64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN-  142 (299)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH-
T ss_pred             cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHh-
Confidence            7544345678889999999999999999998888999999999999877777777763 45678999999888877665 


Q ss_pred             HHhCCCeeEEEeeeeeccc
Q 022900          269 SQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~  287 (290)
                         ..+++++|++++.+.+
T Consensus       143 ---~~~~~ilRp~~v~G~~  158 (299)
T 1n2s_A          143 ---CPKHLIFRTSWVYAGK  158 (299)
T ss_dssp             ---CSSEEEEEECSEECSS
T ss_pred             ---CCCeEEEeeeeecCCC
Confidence               3489999999987653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.87  E-value=1.8e-22  Score=180.16  Aligned_cols=152  Identities=18%  Similarity=0.162  Sum_probs=121.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccC-CCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLE-VDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~-vD~vih~A  188 (290)
                      ++|+|+||| +||||++|++.|+++|++|++++|+....         ..+++++.+|+.+..     +.+ +|+|||+|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a   71 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYCV   71 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence            457899999 59999999999999999999999864331         256888999998764     334 99999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~  266 (290)
                      |..     ..++...+++|+.++.+++++|++.+. +|||+||.++||.....+++|+.. .+.++|+.+|...|.+ ..
T Consensus        72 ~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~  145 (286)
T 3gpi_A           72 AAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LA  145 (286)
T ss_dssp             HHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GG
T ss_pred             CCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hh
Confidence            862     245677888999999999999998884 999999999999887778777763 5667899999988876 44


Q ss_pred             HHHHhCCCeeEEEeeeeeccc
Q 022900          267 FISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      +     ++++++|++++.+..
T Consensus       146 ~-----~~~~ilR~~~v~G~~  161 (286)
T 3gpi_A          146 A-----YSSTILRFSGIYGPG  161 (286)
T ss_dssp             G-----SSEEEEEECEEEBTT
T ss_pred             c-----CCeEEEecccccCCC
Confidence            3     899999999997654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.87  E-value=8.9e-22  Score=171.04  Aligned_cols=155  Identities=16%  Similarity=0.126  Sum_probs=118.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCe-EEEEcccc---cccccCCCEEEEc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-ELIRHDVV---EPLLLEVDQIYHL  187 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v-~~~~~D~~---~~~~~~vD~vih~  187 (290)
                      ..+++|+|+||||+||||++++++|+++|++|++++|+.....+.     ...++ +++.+|++   .+.+.++|+||||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~   91 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL-----RERGASDIVVANLEEDFSHAFASIDAVVFA   91 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-----HHTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH-----HhCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence            447889999999999999999999999999999999864332221     12367 88999987   2345689999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~  266 (290)
                      ||...    ..++..++++|+.++.+++++|++.+. +||++||.+.+..       |..+.+..+|+.+|...|.+++ 
T Consensus        92 ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~~~~~~Y~~sK~~~e~~~~-  159 (236)
T 3e8x_A           92 AGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGPMNMRHYLVAKRLADDELK-  159 (236)
T ss_dssp             CCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSCGGGHHHHHHHHHHHHHHH-
T ss_pred             CCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCChhhhhhHHHHHHHHHHHHH-
Confidence            99643    357889999999999999999998884 9999999544321       1111244678888887777654 


Q ss_pred             HHHHhCCCeeEEEeeeeecc
Q 022900          267 FISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~~  286 (290)
                         ..+++++++||+.+...
T Consensus       160 ---~~gi~~~~lrpg~v~~~  176 (236)
T 3e8x_A          160 ---RSSLDYTIVRPGPLSNE  176 (236)
T ss_dssp             ---HSSSEEEEEEECSEECS
T ss_pred             ---HCCCCEEEEeCCcccCC
Confidence               67999999999998654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.87  E-value=1.2e-22  Score=181.45  Aligned_cols=147  Identities=19%  Similarity=0.192  Sum_probs=120.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----ccc--CCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~--~vD~vih~A  188 (290)
                      -++|+||||+||||++++++|+++|++|++++|.                    .+|+.+.     .+.  ++|+|||||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            4699999999999999999999999999999874                    1455443     233  699999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~  267 (290)
                      |.........++...+++|+.|+.+++++|++.+.+||++||.++||.....+++|+.+ .+.++|+.+|...|.+++.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~  151 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  151 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhh
Confidence            97543333467888999999999999999998878999999999999877677878764 45678999999888776654


Q ss_pred             HHHhCCCeeEEEeeeeecc
Q 022900          268 ISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr~~  286 (290)
                          +.+++++|++++.+.
T Consensus       152 ----~~~~~~lR~~~v~G~  166 (292)
T 1vl0_A          152 ----NPKYYIVRTAWLYGD  166 (292)
T ss_dssp             ----CSSEEEEEECSEESS
T ss_pred             ----CCCeEEEeeeeeeCC
Confidence                457999999998754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.87  E-value=1.6e-21  Score=184.07  Aligned_cols=170  Identities=21%  Similarity=0.138  Sum_probs=128.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch------hhhhcc-------cCCCCeEEEEccccccc---
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENVMHH-------FGNPNFELIRHDVVEPL---  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~-------~~~~~v~~~~~D~~~~~---  177 (290)
                      ..+|+|+||||+||||++++++|+++|++|++++|+.....      +.+...       ....++.++.+|+.++.   
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45789999999999999999999999999999999754110      111110       01357999999998843   


Q ss_pred             -ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC-----CCCCCCCCCCC----
Q 022900          178 -LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD-----PLQHPQKETYW----  247 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~-----~~~~~~~E~~~----  247 (290)
                       +.++|+||||||...   ...++...+++|+.|+.+++++|.+.+++||++||.++ |.     ....++.|+.+    
T Consensus       147 ~~~~~d~Vih~A~~~~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~  222 (427)
T 4f6c_A          147 LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ  222 (427)
T ss_dssp             CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSC
T ss_pred             CcCCCCEEEECCcccC---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCC
Confidence             457999999999743   34567889999999999999999995569999999998 54     23456677664    


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      .+.++|+.+|+..|.+++.+.+ .|++++++||+++.+..+
T Consensus       223 ~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~  262 (427)
T 4f6c_A          223 LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYN  262 (427)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSS
T ss_pred             CCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCC
Confidence            3668899999999999998865 699999999999977643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.87  E-value=1.3e-21  Score=195.61  Aligned_cols=173  Identities=24%  Similarity=0.390  Sum_probs=135.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc--cCCCCeEEEEccccccc-----cc--CCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----LL--EVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~-----~~--~vD~v  184 (290)
                      .++|+|+||||+||||++++++|+++|++|++++|......+....+  ....+++++.+|+.+..     +.  ++|+|
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            56789999999999999999999999999999998654332222111  12356888999998763     33  79999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCC----CCCCCCCC-CCCCChhhhhHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL----QHPQKETY-WGNVNPIGTYFF  258 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~----~~~~~E~~-~~~~~py~~~k~  258 (290)
                      |||||.........++.+.+++|+.|+.+++++|++.+. +||++||.++||...    ..+..|+. ..+.++|+.+|.
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~  168 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY  168 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence            999997543333445678899999999999999998875 999999999998642    24566654 345679999999


Q ss_pred             HHHHHHHHHHHH--hCCCeeEEEeeeeecc
Q 022900          259 SFSLIFLVFISQ--FRPSRKACRFFILLYR  286 (290)
Q Consensus       259 ~~e~~~~~~~~~--~gl~~~ilR~~~lr~~  286 (290)
                      ..|.+++.+.++  .+++++++|++++.+.
T Consensus       169 ~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          169 AIENILNDLYNSDKKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             HHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEeccccCC
Confidence            999999998877  7999999999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.86  E-value=4.1e-22  Score=171.24  Aligned_cols=149  Identities=16%  Similarity=0.158  Sum_probs=118.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-c-----cccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-P-----LLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-~-----~~~~vD~vih~Ag~  190 (290)
                      |+|+||||+||||++++++|+++|++|++++|+.....+       ..+++++.+|+++ +     .+.++|+||||||.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------cCCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence            479999999999999999999999999999986432211       1579999999998 4     35679999999996


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      ...        +.+++|+.++.+++++|++.+. +||++||.++|+..   +..|....+..+|+.+|...|.+++   +
T Consensus        74 ~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e~~~~~~~~Y~~sK~~~e~~~~---~  139 (219)
T 3dqp_A           74 GGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIGAGFDALKDYYIAKHFADLYLT---K  139 (219)
T ss_dssp             TTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCSHHHHHTHHHHHHHHHHHHHHH---H
T ss_pred             CCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccccccccccHHHHHHHHHHHHHH---h
Confidence            431        2567899999999999999885 99999998777532   3333223345678888888877665   5


Q ss_pred             HhCCCeeEEEeeeeecc
Q 022900          270 QFRPSRKACRFFILLYR  286 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~  286 (290)
                      ..+++++++||+.+...
T Consensus       140 ~~~i~~~ilrp~~v~g~  156 (219)
T 3dqp_A          140 ETNLDYTIIQPGALTEE  156 (219)
T ss_dssp             SCCCEEEEEEECSEECS
T ss_pred             ccCCcEEEEeCceEecC
Confidence            77999999999998653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.85  E-value=9.8e-21  Score=168.60  Aligned_cols=151  Identities=16%  Similarity=0.047  Sum_probs=120.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~  194 (290)
                      .+|+|+|||| ||||++++++|+++|++|++++|+...... +    ...+++++.+|+.+..+.++|+|||+|+.....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~----~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~   77 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-I----RASGAEPLLWPGEEPSLDGVTHLLISTAPDSGG   77 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-H----HHTTEEEEESSSSCCCCTTCCEEEECCCCBTTB
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-H----hhCCCeEEEecccccccCCCCEEEECCCccccc
Confidence            3579999998 999999999999999999999985422211 1    125689999999886677899999999964321


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHH--cC-CeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHHHH
Q 022900          195 HYKFNPVKTIKTNVVGTLNMLGLAKR--VG-ARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~-~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                          ++         .+.+++++|++  .+ ++||++||.++||.....+++|+.. .+.++|+.+|...|.+++.+   
T Consensus        78 ----~~---------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---  141 (286)
T 3ius_A           78 ----DP---------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV---  141 (286)
T ss_dssp             ----CH---------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS---
T ss_pred             ----cH---------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh---
Confidence                11         24688899988  45 4999999999999887777777763 56678999999999888777   


Q ss_pred             hCCCeeEEEeeeeeccc
Q 022900          271 FRPSRKACRFFILLYRN  287 (290)
Q Consensus       271 ~gl~~~ilR~~~lr~~~  287 (290)
                      .+++++++|++++.+.+
T Consensus       142 ~~~~~~ilRp~~v~G~~  158 (286)
T 3ius_A          142 PNLPLHVFRLAGIYGPG  158 (286)
T ss_dssp             TTCCEEEEEECEEEBTT
T ss_pred             cCCCEEEEeccceECCC
Confidence            69999999999997654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.85  E-value=2.1e-21  Score=166.82  Aligned_cols=157  Identities=11%  Similarity=-0.000  Sum_probs=119.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc---ccCCCEEEEcccCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL---LLEVDQIYHLACPASP  193 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~vD~vih~Ag~~~~  193 (290)
                      |+|+||||+||||++++++|+++|++|++++|+..    ..... ...+++++.+|+.++.   +.++|+||||||....
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~~~-~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ----KAADR-LGATVATLVKEPLVLTEADLDSVDAVVDALSVPWG   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHH-TCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc----ccccc-cCCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence            47999999999999999999999999999998532    22222 2357899999998864   5689999999997511


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcc-ccCCCCC--CCCCCC-CCCCChhhhhHHHHHHHHHHHHH
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV-YGDPLQH--PQKETY-WGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~v-yg~~~~~--~~~E~~-~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      .       ...++|+.++.+++++|++.+++||++||++. |+.....  +.+|.. +.+..+|+.+|...|. ++.+.+
T Consensus        76 ~-------~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~-~~~~~~  147 (224)
T 3h2s_A           76 S-------GRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYE-YQFLQM  147 (224)
T ss_dssp             S-------SCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHH-HHHHTT
T ss_pred             c-------chhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHH-HHHHHh
Confidence            1       12368999999999999988899999999865 4433322  233332 2336789999988884 455666


Q ss_pred             HhCCCeeEEEeeeeecc
Q 022900          270 QFRPSRKACRFFILLYR  286 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~  286 (290)
                      ..+++++++||+.+...
T Consensus       148 ~~~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          148 NANVNWIGISPSEAFPS  164 (224)
T ss_dssp             CTTSCEEEEEECSBCCC
T ss_pred             cCCCcEEEEcCccccCC
Confidence            77999999999998754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.85  E-value=4e-21  Score=185.38  Aligned_cols=169  Identities=21%  Similarity=0.138  Sum_probs=128.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch------hhhhcc-------cCCCCeEEEEcccccc-c--
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENVMHH-------FGNPNFELIRHDVVEP-L--  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~-------~~~~~v~~~~~D~~~~-~--  177 (290)
                      ..+|+|+||||+||||.+|+++|.++|++|++++|......      +.+...       ....+++++.+|+.++ .  
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            34689999999999999999999999999999998654110      111100       1246899999999984 3  


Q ss_pred             -ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC-----CCCCCCCCCCC----
Q 022900          178 -LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD-----PLQHPQKETYW----  247 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~-----~~~~~~~E~~~----  247 (290)
                       ..++|+||||||..   ....++...+++|+.|+.+++++|++.+++|||+||.++ |.     ....++.|+.+    
T Consensus       228 ~~~~~D~Vih~Aa~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~  303 (508)
T 4f6l_B          228 LPENMDTIIHAGART---DHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ  303 (508)
T ss_dssp             CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSB
T ss_pred             CccCCCEEEECCcee---cCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccc
Confidence             35799999999964   244567778899999999999999985579999999999 43     23446667654    


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+.++|+.+|+..|.++..+.+ .|++++++|++++.+..
T Consensus       304 ~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~  342 (508)
T 4f6l_B          304 LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPY  342 (508)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCS
T ss_pred             cCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCC
Confidence            2568999999999999998865 69999999999987654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.85  E-value=4.6e-21  Score=185.60  Aligned_cols=159  Identities=19%  Similarity=0.121  Sum_probs=122.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccc---cccccCCCEEEEcccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV---EPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~---~~~~~~vD~vih~Ag~~~  192 (290)
                      +|+|+||||+||||++|++.|+++|++|++++|+......             +..|+.   ...+.++|+||||||...
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~-------------v~~d~~~~~~~~l~~~D~Vih~A~~~~  213 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK-------------RFWDPLNPASDLLDGADVLVHLAGEPI  213 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC-------------EECCTTSCCTTTTTTCSEEEECCCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc-------------eeecccchhHHhcCCCCEEEECCCCcc
Confidence            6899999999999999999999999999999996543211             333443   345678999999999754


Q ss_pred             CCC-CCCChHHHHHHHHHHHHHHHHH-HHHcCC-eEEEEcCCcccc-CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH
Q 022900          193 PVH-YKFNPVKTIKTNVVGTLNMLGL-AKRVGA-RFLLTSTSEVYG-DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       193 ~~~-~~~~~~~~~~~Nv~gt~~ll~a-~~~~~~-riV~vSS~~vyg-~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ... ...++..++++|+.|+.+++++ +++.+. +||++||+++|| .....++.|+.+.+.++|+..+...|..+. +.
T Consensus       214 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~-~~  292 (516)
T 3oh8_A          214 FGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATA-PA  292 (516)
T ss_dssp             ---CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH-HH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH-HH
Confidence            322 3345677899999999999999 555554 999999999999 555567888876677788888887777654 44


Q ss_pred             HHhCCCeeEEEeeeeecccC
Q 022900          269 SQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~~  288 (290)
                      +..|++++++|++++.+.++
T Consensus       293 ~~~gi~~~ilRp~~v~Gp~~  312 (516)
T 3oh8_A          293 SDAGKRVAFIRTGVALSGRG  312 (516)
T ss_dssp             HHTTCEEEEEEECEEEBTTB
T ss_pred             HhCCCCEEEEEeeEEECCCC
Confidence            55799999999999987543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.85  E-value=3.2e-20  Score=165.18  Aligned_cols=161  Identities=14%  Similarity=0.034  Sum_probs=127.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+....+  ..++.++.+|++++.            +.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999999765554444433  457888999998763            247


Q ss_pred             CCEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       181 vD~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +|+||||||......      ..+++++++++|+.|++++++++    ++.+. +||++||.+.+...          ..
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~  155 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY----------DM  155 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC----------SS
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC----------CC
Confidence            999999999753211      22345778999999999999998    44543 99999998766321          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      ..+|+.+|.+.+.+++.++.+   +|+.+..++|+.+.-
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t  194 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRT  194 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcC
Confidence            358999999999999998887   689999999998753

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.84  E-value=1.8e-20  Score=172.20  Aligned_cols=157  Identities=15%  Similarity=0.107  Sum_probs=125.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-----CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccC---CC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG-----DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLE---VD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~---vD  182 (290)
                      +|+|+||||+||||++++++|+++|     ++|++++|......      ....+++++.+|+.+..     +.+   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            4689999999999999999999999     99999998654322      12357889999998763     345   99


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc--CC-eEE-------EEcCCccccCC--CCCCCCCCCCC-C
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--GA-RFL-------LTSTSEVYGDP--LQHPQKETYWG-N  249 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~-riV-------~vSS~~vyg~~--~~~~~~E~~~~-~  249 (290)
                      +||||||...     .++...+++|+.|+.+++++|++.  +. ++|       |+||.++||..  ...++.|+.+. +
T Consensus        75 ~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~  149 (364)
T 2v6g_A           75 HVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLK  149 (364)
T ss_dssp             EEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCS
T ss_pred             EEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCc
Confidence            9999999642     467889999999999999999987  54 887       79999999875  34577787642 2


Q ss_pred             -CChhhhhHHHHHHHHHHHHHHhC-CCeeEEEeeeeeccc
Q 022900          250 -VNPIGTYFFSFSLIFLVFISQFR-PSRKACRFFILLYRN  287 (290)
Q Consensus       250 -~~py~~~k~~~e~~~~~~~~~~g-l~~~ilR~~~lr~~~  287 (290)
                       .++|    ...|..+..+.++++ ++++++|++++.+..
T Consensus       150 ~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~  185 (364)
T 2v6g_A          150 YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFS  185 (364)
T ss_dssp             SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCC
T ss_pred             cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCC
Confidence             3455    457888888887777 999999999997754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=1e-20  Score=161.79  Aligned_cols=154  Identities=12%  Similarity=0.089  Sum_probs=111.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc---cccCCCEEEEcccCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLACPASP  193 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~vD~vih~Ag~~~~  193 (290)
                      |+|+||||+||||++++++|+++|++|++++|+...    .... . .+++++.+|+.++   .+.++|+||||||....
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~-~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK----ITQT-H-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPD   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH----HHHH-C-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh----hhhc-c-CCCeEEeccccChhhhhhcCCCEEEECCcCCcc
Confidence            579999999999999999999999999999985322    2222 1 5789999999886   46789999999996321


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCcc-ccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHHH-
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEV-YGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFIS-  269 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~v-yg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~~-  269 (290)
                               ..++|+.++.+++++|++.+ +++|++||.+. |+.....+..|+. ..+..+|+..|...|.+ +.+.+ 
T Consensus        75 ---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~~  144 (221)
T 3ew7_A           75 ---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLKSH  144 (221)
T ss_dssp             ---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHH-HHHHTT
T ss_pred             ---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH-HHHHhh
Confidence                     13469999999999999986 49999999876 4544433444433 24556788889888775 44444 


Q ss_pred             HhCCCeeEEEeeeeecc
Q 022900          270 QFRPSRKACRFFILLYR  286 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~  286 (290)
                      ..+++++++||+.+...
T Consensus       145 ~~gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          145 QAEFSWTYISPSAMFEP  161 (221)
T ss_dssp             TTTSCEEEEECSSCCCC
T ss_pred             ccCccEEEEeCcceecC
Confidence            67999999999998654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.84  E-value=2e-20  Score=166.83  Aligned_cols=159  Identities=14%  Similarity=0.039  Sum_probs=122.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+|+||||+||||.+++++|+++|++|++++|+.....+....  ...++.++.+|++++.            +.++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA--YPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--ccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999999865443333222  2357999999998763            2379


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||.......    .++++.++++|+.|+.++++++    ++.+ .+||++||.+.+...          .+..+
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  150 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF----------AGFSA  150 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------TTCHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC----------CCchH
Confidence            999999997533222    2345678999999966666654    4555 499999998765321          13468


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  185 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFR  185 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence            999999999999999887   78999999998875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.84  E-value=4e-20  Score=160.71  Aligned_cols=149  Identities=15%  Similarity=0.051  Sum_probs=118.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      +++|+|+||||+||||++++++|+++|+  +|++++|+.....+..     ..++.++.+|++++.     +.++|+|||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            4578999999999999999999999999  9999998754332211     135788899998753     457999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~  265 (290)
                      |||....   ..+++.++++|+.++.+++++|++.+. +||++||.++|+.            +..+|+.+|...|.++ 
T Consensus        91 ~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------~~~~Y~~sK~~~e~~~-  154 (242)
T 2bka_A           91 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------SNFLYLQVKGEVEAKV-  154 (242)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHH-
T ss_pred             CCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------CcchHHHHHHHHHHHH-
Confidence            9996422   224577899999999999999998885 9999999999862            2358999988776654 


Q ss_pred             HHHHHhCCC-eeEEEeeeeecc
Q 022900          266 VFISQFRPS-RKACRFFILLYR  286 (290)
Q Consensus       266 ~~~~~~gl~-~~ilR~~~lr~~  286 (290)
                         +.++++ ++++||+.+...
T Consensus       155 ---~~~~~~~~~~vrpg~v~~~  173 (242)
T 2bka_A          155 ---EELKFDRYSVFRPGVLLCD  173 (242)
T ss_dssp             ---HTTCCSEEEEEECCEEECT
T ss_pred             ---HhcCCCCeEEEcCceecCC
Confidence               346885 999999998654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.83  E-value=7.3e-20  Score=154.60  Aligned_cols=145  Identities=14%  Similarity=0.182  Sum_probs=113.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~~  191 (290)
                      |+|+||||+|+||++++++|+++|++|++++|+.....+    . ...+++++.+|+.++.     +.++|+||||||..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----E-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----S-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc----c-cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence            789999999999999999999999999999986432211    1 1357889999998763     46799999999964


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                      ..    .++   .++|+.++.+++++|++.+. +||++||.++|+.....+.      +..+|+..|...|.++    ++
T Consensus        79 ~~----~~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~------~~~~y~~~K~~~e~~~----~~  141 (206)
T 1hdo_A           79 ND----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP------RLQAVTDDHIRMHKVL----RE  141 (206)
T ss_dssp             TC----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG------GGHHHHHHHHHHHHHH----HH
T ss_pred             CC----CCc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc------cchhHHHHHHHHHHHH----Hh
Confidence            33    122   14899999999999998885 9999999999975433221      3357888887776655    45


Q ss_pred             hCCCeeEEEeeee
Q 022900          271 FRPSRKACRFFIL  283 (290)
Q Consensus       271 ~gl~~~ilR~~~l  283 (290)
                      .+++++++|++.+
T Consensus       142 ~~i~~~~lrp~~~  154 (206)
T 1hdo_A          142 SGLKYVAVMPPHI  154 (206)
T ss_dssp             TCSEEEEECCSEE
T ss_pred             CCCCEEEEeCCcc
Confidence            7999999999997

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.83  E-value=3.3e-20  Score=163.84  Aligned_cols=159  Identities=16%  Similarity=0.086  Sum_probs=124.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+||||.+++++|+++|++|++++|+.....+...++  ..++.++.+|++++.            +.++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            56889999999999999999999999999999998644333333332  356889999998763            2379


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----V--GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~--~~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++.+    .  +.+||++||.+.+....          ...
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  153 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA----------LVA  153 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TBH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC----------CCh
Confidence            999999997543332    234577899999999999998753    2  24899999987653211          235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.++   |+++..++|+.+.
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  189 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVD  189 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCc
Confidence            79999999999999998765   8999999999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.83  E-value=5.8e-20  Score=163.09  Aligned_cols=165  Identities=13%  Similarity=0.125  Sum_probs=125.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+....++.++.+|++++.            +.
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999998854322222222212237899999998763            23


Q ss_pred             CCCEEEEcccCCCCC--C-CC---CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPV--H-YK---FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~--~-~~---~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|+||||||.....  . .+   +++++++++|+.|+.++++++.+.    + .+||++||.+.|....         .
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~  162 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------G  162 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---------T
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC---------C
Confidence            799999999975321  1 11   345678999999999999988653    3 3999999998875321         1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      ...+|+.+|...+.+++.+..+   +|++++++||+.+..
T Consensus       163 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  202 (278)
T 2bgk_A          163 VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVAS  202 (278)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecc
Confidence            2357999999999999888876   589999999998754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.83  E-value=9.4e-20  Score=161.36  Aligned_cols=155  Identities=15%  Similarity=0.129  Sum_probs=123.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+|+||||+||||.++++.|+++|++|++++|+.....        ..++.++.+|++++.            ++++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            56789999999999999999999999999999998643321        236889999998863            2379


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++    ++.+ .+||++||...+.....        .+..+
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------~~~~~  169 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG--------MPSAL  169 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT--------CCCHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC--------CccHH
Confidence            999999997644332    2345778999999999999987    3444 39999999877542211        13358


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.++.++   |+++.+++|+.+.
T Consensus       170 Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  204 (260)
T 3un1_A          170 ASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIK  204 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCC
Confidence            9999999999999999887   8899999998875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.83  E-value=2.3e-20  Score=167.66  Aligned_cols=169  Identities=13%  Similarity=0.002  Sum_probs=127.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+  ..++.++.+|+++..        +.++|+||
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--AGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--SSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--cCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            67899999999999999999999999999999998644333333222  457999999998763        23689999


Q ss_pred             EcccCCCCCC--CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCC-CCCCCC--CCCCCCChhhhhHHH
Q 022900          186 HLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-QHPQKE--TYWGNVNPIGTYFFS  259 (290)
Q Consensus       186 h~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~-~~~~~E--~~~~~~~py~~~k~~  259 (290)
                      ||||...+..  ..++++.++++|+.|+.++++++.+... +||++||.+.|.... .....+  ..+.+..+|+.+|.+
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  171 (291)
T 3rd5_A           92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLA  171 (291)
T ss_dssp             ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHH
T ss_pred             ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHH
Confidence            9999764332  3466788999999999999999988764 999999988764321 111111  222233569999999


Q ss_pred             HHHHHHHHHHHh---C--CCeeEEEeeeee
Q 022900          260 FSLIFLVFISQF---R--PSRKACRFFILL  284 (290)
Q Consensus       260 ~e~~~~~~~~~~---g--l~~~ilR~~~lr  284 (290)
                      .+.+++.++.++   |  +.+..+.|+.+.
T Consensus       172 ~~~~~~~la~e~~~~g~~i~v~~v~PG~v~  201 (291)
T 3rd5_A          172 NLLFTSELQRRLTAAGSPLRALAAHPGYSH  201 (291)
T ss_dssp             HHHHHHHHHHHHHHTTCCCEEEEECCSGGG
T ss_pred             HHHHHHHHHHHHhhCCCCEEEEEeeCCCCc
Confidence            888888888765   4  777788887653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=1.9e-20  Score=165.29  Aligned_cols=148  Identities=19%  Similarity=0.137  Sum_probs=117.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~Ag  189 (290)
                      |+|+||||+||||++++++|+ +|++|++++|+....          .+   +.+|+.++.     +.  ++|+||||||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            479999999999999999999 589999999864211          11   778988763     23  4999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      .........+++..+++|+.++.+++++|++.+.+||++||.++|+.... ++.|+.+ .+.++|+.+|...|.+++.  
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~--  143 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ--  143 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC--
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC--
Confidence            75433334578889999999999999999988789999999999976543 6666653 4557899999888777655  


Q ss_pred             HHhCCCeeEEEeeeeec
Q 022900          269 SQFRPSRKACRFFILLY  285 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~  285 (290)
                          ++++++|++++.+
T Consensus       144 ----~~~~~iR~~~v~G  156 (273)
T 2ggs_A          144 ----DDSLIIRTSGIFR  156 (273)
T ss_dssp             ----TTCEEEEECCCBS
T ss_pred             ----CCeEEEecccccc
Confidence                6789999998863

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.83  E-value=5.3e-20  Score=160.30  Aligned_cols=158  Identities=16%  Similarity=0.119  Sum_probs=121.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++|+|+||||+||||++++++|+++|++|++++|+.....+...+   ...++++.+|++++.        +.++|+||
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---CPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            5778999999999999999999999999999999864222222111   135677799998763        23589999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||||.......    .+++++++++|+.|+.++++++.+.    +  .+||++||...|....          ...+|+.
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~  151 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------NLITYSS  151 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHHH
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC----------CcchhHH
Confidence            99997543322    2345678999999999999987543    3  4899999998875321          2358999


Q ss_pred             hHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|...+.+++.+..+   .+++++++||+.+.
T Consensus       152 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~  183 (244)
T 1cyd_A          152 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVL  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            999999999998877   58899999998875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.83  E-value=8.8e-20  Score=160.84  Aligned_cols=159  Identities=18%  Similarity=0.143  Sum_probs=120.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++  ..++.++.+|++++.            +.++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999765544433332  356889999998763            2479


Q ss_pred             CEEEEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHHc----------C-CeEEEEcCCccccCCCCCCC
Q 022900          182 DQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----------G-ARFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       182 D~vih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~-~riV~vSS~~vyg~~~~~~~  242 (290)
                      |+||||||......        ..+++++++++|+.|++++++++.+.          + .+||++||.+.+....    
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~----  158 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI----  158 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC----
Confidence            99999999764322        12446778999999999999998642          2 3899999987653211    


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                            ...+|+.+|.+.+.+.+.++.+   +|+++..++|+.+.
T Consensus       159 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  197 (257)
T 3tpc_A          159 ------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFD  197 (257)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBS
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCC
Confidence                  2357999999999998888877   68999999998874

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.83  E-value=4.9e-20  Score=165.43  Aligned_cols=157  Identities=18%  Similarity=0.197  Sum_probs=113.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC-
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH-  195 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~-  195 (290)
                      |+|+|||||||||++|+++|+++|++|++++|+....             ++...++....+.++|.|||+|+...... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------------~~~~~~~~~~~l~~~d~vihla~~~i~~~~   67 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------------RITWDELAASGLPSCDAAVNLAGENILNPL   67 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------EEEHHHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------------eeecchhhHhhccCCCEEEEeccCcccchh
Confidence            6899999999999999999999999999999853211             11112233445678999999998532221 


Q ss_pred             C---CCChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcCCccccCCCCCCCCCCCCCC-CChhhhhHHHHHHHHHHHH
Q 022900          196 Y---KFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGN-VNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       196 ~---~~~~~~~~~~Nv~gt~~ll~a~~~~~~---riV~vSS~~vyg~~~~~~~~E~~~~~-~~py~~~k~~~e~~~~~~~  268 (290)
                      .   ......+++.|+.+|.+++++++..+.   ++|++||+++||.....+..|+.+.. .+.++..+...|.  ..+.
T Consensus        68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~--~~~~  145 (298)
T 4b4o_A           68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEA--AARL  145 (298)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHH--HHCC
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHH--HHHh
Confidence            1   122356789999999999999988763   58999999999998888888886422 2233333332232  2233


Q ss_pred             HHhCCCeeEEEeeeeecccC
Q 022900          269 SQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~~  288 (290)
                      ...+++++++|++++.+.+|
T Consensus       146 ~~~~~~~~~~r~~~v~g~~~  165 (298)
T 4b4o_A          146 PGDSTRQVVVRSGVVLGRGG  165 (298)
T ss_dssp             SSSSSEEEEEEECEEECTTS
T ss_pred             hccCCceeeeeeeeEEcCCC
Confidence            45689999999999987764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.83  E-value=4.8e-20  Score=157.07  Aligned_cols=145  Identities=16%  Similarity=0.114  Sum_probs=118.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-cC--CCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-LE--VDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~--vD~vih~Ag  189 (290)
                      .+|+|+||||+|+||++++++|+++|+  +|++++|+...         ...+++++.+|+.+... .+  +|+||||||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~   74 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGSIDTAFCCLG   74 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhhhcEEEECee
Confidence            457999999999999999999999998  99999986533         12467888889877532 12  899999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ....  ...++++.+++|+.++.+++++|++.+. +||++||.++|+.            +..+|+..|...|.+++.  
T Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~y~~sK~~~e~~~~~--  138 (215)
T 2a35_A           75 TTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------SSIFYNRVKGELEQALQE--  138 (215)
T ss_dssp             CCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHHTT--
T ss_pred             eccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------CccHHHHHHHHHHHHHHH--
Confidence            6421  2456788999999999999999999885 8999999999863            346899999887776554  


Q ss_pred             HHhCCC-eeEEEeeeeecc
Q 022900          269 SQFRPS-RKACRFFILLYR  286 (290)
Q Consensus       269 ~~~gl~-~~ilR~~~lr~~  286 (290)
                        .+++ ++++||+.+...
T Consensus       139 --~~~~~~~~vrp~~v~g~  155 (215)
T 2a35_A          139 --QGWPQLTIARPSLLFGP  155 (215)
T ss_dssp             --SCCSEEEEEECCSEEST
T ss_pred             --cCCCeEEEEeCceeeCC
Confidence              5999 999999998754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.83  E-value=1.2e-19  Score=163.36  Aligned_cols=163  Identities=12%  Similarity=0.051  Sum_probs=127.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      ..+++|+|+||||+|+||.+++++|+++|++|++++|+.....+......  ...++.++.+|++++.            
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999986543333222222  2457899999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +.++|+||||||......     ..+++++++++|+.|++++++++.+..   .+||++||...+....          .
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  192 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----------T  192 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT----------T
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC----------C
Confidence            247999999999754322     234567799999999999999998653   3899999988764221          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       193 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  230 (291)
T 3ijr_A          193 LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIW  230 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCc
Confidence            2579999999999999988875   8999999998774

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.83  E-value=3.9e-20  Score=162.92  Aligned_cols=169  Identities=14%  Similarity=-0.036  Sum_probs=125.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++.  ...++.++.+|++++.            +
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4678899999999999999999999999999999996544433332221  1357899999998763            2


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      .++|+||||||......    ..++++.++++|+.|+.++++++.+.    +  .+||++||.+.+......   .....
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---~~~~~  167 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS---LNGSL  167 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE---TTEEC
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc---ccccc
Confidence            35999999999754332    12345678999999999999987542    2  489999998765322110   11112


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +..+|+.+|.+.+.+++.+..++   |++++++||+.+.
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  206 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVN  206 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence            34689999999999999888764   8999999998875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.83  E-value=7.1e-20  Score=161.88  Aligned_cols=161  Identities=11%  Similarity=0.005  Sum_probs=123.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+...++..  ..++.++.+|++++.            +.
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999864322222222111  357889999998763            23


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||.......    .++++.++++|+.|+.++++++.    +.+ .+||++||.+.|....          ..
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  154 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW----------YE  154 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC----------Cc
Confidence            79999999997543322    23456789999999999999874    334 4999999998875321          23


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  191 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLIL  191 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            57999999999999888876   58999999999875

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.83  E-value=5.9e-20  Score=160.88  Aligned_cols=161  Identities=16%  Similarity=0.097  Sum_probs=124.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.+
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            577899999999999999999999999999999986432222222221 2357889999998763            137


Q ss_pred             CCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|+||||||.......+   ++++.++++|+.|+.++++++.    +.+ .+||++||.+.|...          .+..+
T Consensus        89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  158 (255)
T 1fmc_A           89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------INMTS  158 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------TTCHH
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------CCCcc
Confidence            99999999976443222   3456789999999999999875    334 499999998877522          13358


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..++   +++++++||+.+.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~  193 (255)
T 1fmc_A          159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAIL  193 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCc
Confidence            9999999999999888765   8899999998875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.82  E-value=6.2e-20  Score=163.96  Aligned_cols=163  Identities=18%  Similarity=0.129  Sum_probs=123.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC----CCCeEEEEccccccc----------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPL----------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~----------  177 (290)
                      ..+++|+|+||||+||||.++++.|+++|++|++++|+.....+...++..    ..++.++.+|++++.          
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999864433333322221    127889999998763          


Q ss_pred             --ccCCCEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                        +.++|+||||||..... .    ..+++++++++|+.|++++++++.+    .+ .+||++||.+.+....       
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  159 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR-------  159 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC-------
Confidence              24799999999963221 1    2234577899999999999998754    33 3899999988764221       


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ...+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       160 ---~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  198 (281)
T 3svt_A          160 ---WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIR  198 (281)
T ss_dssp             ---TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             ---CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence               23589999999999999998775   5888999998775

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.82  E-value=1e-19  Score=160.63  Aligned_cols=161  Identities=12%  Similarity=0.012  Sum_probs=123.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c-c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L-L  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~-~  179 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            + .
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999986433222222221 2357889999998763            2 5


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||......    ..++++.++++|+.|+.++++++.    +.+ .+||++||.+.+...          ...
T Consensus        87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  156 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV----------PYE  156 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----------TTC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------CCc
Confidence            7999999999754322    123456789999999999999874    344 499999998765321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|...+.+.+.+..++   |+++++++|+.+.
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  193 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA  193 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCC
Confidence            579999999999999988765   8899999998764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.82  E-value=1e-19  Score=161.17  Aligned_cols=161  Identities=18%  Similarity=0.112  Sum_probs=125.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++.  ...++.++.+|++++.            +
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999986543333333222  2257999999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccc--cCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVY--GDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vy--g~~~~~~~~E~~~  247 (290)
                      .++|+||||||........    +++++++++|+.|++++++++.+.    + .+||++||.+.+  +.+          
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  156 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP----------  156 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC----------
Confidence            4799999999976433322    345678999999999999987543    4 499999997642  211          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|.+.+.+.+.++.+   +|+++..++|+.+.
T Consensus       157 -~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  195 (262)
T 3pk0_A          157 -GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIM  195 (262)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             -CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCc
Confidence             2358999999999999999887   58999999998774

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.82  E-value=1.7e-19  Score=162.61  Aligned_cols=161  Identities=18%  Similarity=0.085  Sum_probs=126.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+|+||||+|+||.++++.|+++|++|++++|+.....+...++..  ..++.++.+|++++.            +
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999976544443333322  257899999998863            3


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc--ccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV--YGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v--yg~~~~~~~~E~~~  247 (290)
                      .++|+||||||.......    .+++++++++|+.|++++++++.    +.+ .+||++||.+.  ++.+          
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~----------  187 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYP----------  187 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCT----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCC----------
Confidence            479999999997644332    23457789999999999999873    444 49999999764  3321          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|.+.+.+.+.++.+   +|+.+..++|+.+.
T Consensus       188 -~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  226 (293)
T 3rih_A          188 -GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNIL  226 (293)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCc
Confidence             2358999999999999988876   48999999998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.82  E-value=1.7e-19  Score=157.02  Aligned_cols=165  Identities=10%  Similarity=-0.066  Sum_probs=123.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc-
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL-  179 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~-  179 (290)
                      ++|+|+||||+|+||.+++++|+++|  ++|++++|+.....+ +.+. ...++.++.+|++++.            +. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999  999999986543322 2222 3457999999998763            12 


Q ss_pred             -CCCEEEEcccCCC-CCC----CCCChHHHHHHHHHHHHHHHHHHHH----c------------CCeEEEEcCCccccCC
Q 022900          180 -EVDQIYHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V------------GARFLLTSTSEVYGDP  237 (290)
Q Consensus       180 -~vD~vih~Ag~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~------------~~riV~vSS~~vyg~~  237 (290)
                       ++|+||||||... ...    ..++++.++++|+.|+.++++++.+    .            ..+||++||...+...
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             7999999999765 222    1233567899999999999988643    2            3599999998765322


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..   .+.+..+..+|+.+|.+.+.+++.+..++   |+++.+++|+.+.
T Consensus       160 ~~---~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  206 (250)
T 1yo6_A          160 NT---SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ  206 (250)
T ss_dssp             CC---STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred             cc---cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCcee
Confidence            11   11111234579999999999999988875   8999999998774

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.82  E-value=8.2e-20  Score=161.37  Aligned_cols=163  Identities=12%  Similarity=0.016  Sum_probs=117.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c-
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L-  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~-  178 (290)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|+.++.            + 
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999986432222222211 2346889999998762            1 


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||......    ..+++++++++|+.|+.++++++.    +.+ .+||++||.+.+...          ..
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~  160 (266)
T 1xq1_A           91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA----------SV  160 (266)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC----------CC
Confidence            57999999999753322    123456789999999999999883    444 599999998776421          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                      ..+|+.+|...+.+++.+..++   |++++++||+.+..
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  199 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIAT  199 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCcc
Confidence            3589999999999999888775   89999999988753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.82  E-value=1.8e-19  Score=158.15  Aligned_cols=159  Identities=16%  Similarity=0.083  Sum_probs=122.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+. +...+.+..  ...++.++.+|++++.            +.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN--LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999865 222222211  2357889999998763            347


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||......    ..+++++++++|+.|+.++++++    ++.+ .+||++||.+.+...          ....
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  152 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------EAYT  152 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------SSCH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC----------CCch
Confidence            999999999754332    12345678999999999998884    4444 499999998876421          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  188 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVR  188 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCc
Confidence            79999999999998888764   8999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.82  E-value=1.6e-19  Score=158.67  Aligned_cols=164  Identities=15%  Similarity=0.010  Sum_probs=123.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+||||.+++++|+++|++|++++|+.....+....+. ...++.++.+|++++.            +.+
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578899999999999999999999999999999986432222222211 2357899999998763            237


Q ss_pred             CCEEEEcccCCC-CCCC-C---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPAS-PVHY-K---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~-~~~~-~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||... .... +   +++++++++|+.|+.++++++.+    .+ .+||++||.+.+.....        .+.
T Consensus        91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------~~~  162 (260)
T 3awd_A           91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP--------QQQ  162 (260)
T ss_dssp             CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------SCC
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC--------CCc
Confidence            999999999754 2221 1   23467899999999999998754    33 49999999876532111        123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      .+|+.+|.+.+.+++.+..+   +|++++++||+.+..
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t  200 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIET  200 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeecc
Confidence            57999999999999998887   689999999998753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.82  E-value=1.2e-19  Score=160.06  Aligned_cols=162  Identities=14%  Similarity=0.075  Sum_probs=125.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999986433333222221 2467999999998863            24


Q ss_pred             CCCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|+||||||.......+   ++++.++++|+.|++++++++.    +.+ .+||++||.+.+...          ....
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  158 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN----------VRMA  158 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC----------TTCH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC----------CCch
Confidence            799999999976543322   3456789999999999999874    344 399999998765321          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  194 (256)
T 3gaf_A          159 SYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIK  194 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEcccc
Confidence            89999999999999988774   7888899988764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.82  E-value=8.9e-20  Score=159.89  Aligned_cols=160  Identities=16%  Similarity=0.052  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+||||.+++++|+++|++|+++++......+.+.+.+  ...++.++.+|++++.            +.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999998875422222222111  2457889999998763            24


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCCccc-cCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVY-GDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~-riV~vSS~~vy-g~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||.......    .+++++++++|+.|+.++++++    ++.+. +||++||.+.+ +.+           .
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~  150 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP-----------G  150 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----------C
Confidence            79999999997643332    2345678999999999999998    34443 99999997654 321           2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.++.+   +|+++..++|+.+.
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  188 (246)
T 3osu_A          151 QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIV  188 (246)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCc
Confidence            358999999999999988874   58889999998775

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.82  E-value=1.1e-19  Score=159.49  Aligned_cols=160  Identities=15%  Similarity=0.072  Sum_probs=113.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ...++|+|+||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999999999999986443333322222 2457899999998863            2


Q ss_pred             cCCCEEEEcccCCCCCC-------CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      .++|+||||||......       ..+++++++++|+.|+.++++++.    +.+ .+||++||.+.|.           
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  153 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-----------  153 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-----------
Confidence            37999999999742111       223456789999999888887753    333 4899999988772           


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                        ...+|+.+|.+.+.+++.+..++   |+++..++|+.+.
T Consensus       154 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  192 (253)
T 3qiv_A          154 --YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPID  192 (253)
T ss_dssp             --------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCc
Confidence              22469999999999999999886   6888888888764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.82  E-value=2.5e-19  Score=158.16  Aligned_cols=165  Identities=13%  Similarity=-0.009  Sum_probs=124.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCC---CeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccccc---------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARG---DSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL---------  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~---------  178 (290)
                      ...++|+|+||||+|+||.+++++|+++|   ++|++++|+...... +.++. ...++.++.+|++++..         
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            44778999999999999999999999999   999999997654332 22221 13578999999987631         


Q ss_pred             ---c--CCCEEEEcccCCC-CCC----CCCChHHHHHHHHHHHHHHHHHHHHc----------------CCeEEEEcCCc
Q 022900          179 ---L--EVDQIYHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----------------GARFLLTSTSE  232 (290)
Q Consensus       179 ---~--~vD~vih~Ag~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----------------~~riV~vSS~~  232 (290)
                         .  ++|+||||||... ...    ..++++.++++|+.|+.++++++.+.                +.+||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence               2  6999999999754 111    22345678999999999999987542                35899999988


Q ss_pred             cccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          233 VYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       233 vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+....       ...+..+|+.+|.+.+.+++.+..+   +++++++++|+.+.
T Consensus       176 ~~~~~~-------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  223 (267)
T 1sny_A          176 GSIQGN-------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK  223 (267)
T ss_dssp             GCSTTC-------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred             ccccCC-------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCccee
Confidence            764321       0113357999999999999888876   58999999998874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.82  E-value=4.7e-20  Score=164.69  Aligned_cols=172  Identities=14%  Similarity=0.003  Sum_probs=126.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc--------hhhhh----cc-cCCCCeEEEEccccccc--
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--------KENVM----HH-FGNPNFELIRHDVVEPL--  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~--------~~~~~----~~-~~~~~v~~~~~D~~~~~--  177 (290)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+....        .+...    .. ....++.++.+|++++.  
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            36789999999999999999999999999999999862211        11111    11 12467999999998763  


Q ss_pred             ----------ccCCCEEEEcccCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCC
Q 022900          178 ----------LLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~  242 (290)
                                +.++|+||||||.....  ...+++++++++|+.|++++++++.+..   .+||++||.+.+......+.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence                      23799999999976433  2234567899999999999999987643   48999999876543222222


Q ss_pred             CCCCC-CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          243 KETYW-GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       243 ~E~~~-~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .|... ....+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  212 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVN  212 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBS
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence            23221 122469999999999999988876   8999999998874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.82  E-value=1.1e-19  Score=161.85  Aligned_cols=161  Identities=11%  Similarity=-0.023  Sum_probs=120.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---c-CCCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---F-GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+....+   . ...++.++.+|++++.            
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999998643322222221   1 2346889999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCcc-ccCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEV-YGDPLQHPQKE  244 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~v-yg~~~~~~~~E  244 (290)
                      +.++|+||||||......        ..++++.++++|+.|+.++++++.+.    +.+||++||.+. +...       
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  156 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT-------  156 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC-------
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCC-------
Confidence            237999999999754322        22345678999999999999987653    469999999876 5321       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                         ....+|+.+|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       157 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  196 (278)
T 1spx_A          157 ---PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA  196 (278)
T ss_dssp             ---TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence               12247999999999988888765   58999999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.81  E-value=2.7e-19  Score=158.11  Aligned_cols=159  Identities=14%  Similarity=0.010  Sum_probs=121.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....+ . .++.++.+|++++.            +.++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-E-NGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-T-TCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-h-cCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998643222222222 1 26788999998763            2379


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||.......    .++++.++++|+.|+.++++++.+    .+  .+||++||...+...          ....
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  157 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------PLLA  157 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------TTCH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC----------CCch
Confidence            999999997543221    234577899999999999998753    33  599999998765321          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.+..++   |+++++++|+.+.
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  193 (263)
T 3ak4_A          158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVK  193 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEeccccc
Confidence            89999999999998888764   8999999998774

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.81  E-value=1.7e-19  Score=158.98  Aligned_cols=159  Identities=14%  Similarity=0.105  Sum_probs=120.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++  ..++.++.+|++++.            +.++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998643222222222  346888999998763            2379


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||......    ..++++.++++|+.|+.++++++    ++.+ .+||++||.+.+...          ....+
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  150 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------ALTSS  150 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTCHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------CCchh
Confidence            99999999754322    22346778999999999766654    4444 499999998766321          12358


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  185 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTY  185 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCc
Confidence            9999999999888888764   7899999998774

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.81  E-value=1.6e-19  Score=161.67  Aligned_cols=161  Identities=11%  Similarity=-0.017  Sum_probs=122.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc--CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+.+ .++.  ...++.++.+|++++.            +
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            56789999999999999999999999999999998432222222 2221  2457899999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||.......    .+++++++++|+.|+.++++++.    +.+ .+||++||.+.+....          .
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  172 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP----------F  172 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC----------C
Confidence            479999999997644332    23456789999999999999873    344 4899999987653211          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  210 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVL  210 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCc
Confidence            2589999999999999888774   7889999998764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.81  E-value=1.3e-19  Score=157.60  Aligned_cols=154  Identities=12%  Similarity=0.060  Sum_probs=113.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      .++|+|+||||+||||++++++|+++  |++|++++|+.    +.....  ..++.++.+|+++..     +.++|+|||
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~----~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   75 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA----QGKEKI--GGEADVFIGDITDADSINPAFQGIDALVI   75 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH----HHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC----Cchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence            35789999999999999999999999  89999999853    222222  346778899998753     467999999


Q ss_pred             cccCCCCCC-------------CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          187 LACPASPVH-------------YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       187 ~Ag~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |||......             ...++..++++|+.++.+++++|++.+. +||++||.+++..        ..  +..+
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~--~~~~  145 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DH--PLNK  145 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TC--GGGG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CC--cccc
Confidence            999653211             1122345789999999999999998875 9999999887531        11  2233


Q ss_pred             -----hhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          253 -----IGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       253 -----y~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                           |..+|...|.++    +..+++++++||+.+....
T Consensus       146 ~~~~~y~~sK~~~e~~~----~~~~i~~~~vrpg~v~~~~  181 (253)
T 1xq6_A          146 LGNGNILVWKRKAEQYL----ADSGTPYTIIRAGGLLDKE  181 (253)
T ss_dssp             GGGCCHHHHHHHHHHHH----HTSSSCEEEEEECEEECSC
T ss_pred             ccchhHHHHHHHHHHHH----HhCCCceEEEecceeecCC
Confidence                 444666655544    4579999999999886543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.81  E-value=1.7e-19  Score=161.30  Aligned_cols=163  Identities=13%  Similarity=-0.033  Sum_probs=122.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+.++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999999999999986443333333322 2457999999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH------cC-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR------VG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~------~~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      .++|+||||||........    +++++++++|+.|++++++++.+      .+ .+||++||.+.+...          
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~----------  169 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV----------  169 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC----------
Confidence            4799999999976443322    33567899999999999998755      33 389999998765321          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  209 (279)
T 3sju_A          170 MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVE  209 (279)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBC
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCccc
Confidence            12357999999999999988877   57889999998764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.81  E-value=3.3e-19  Score=157.11  Aligned_cols=160  Identities=18%  Similarity=0.149  Sum_probs=124.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+.....+...+.  ..++.++.+|++++.            +.+
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            367899999999999999999999999999999999765444433333  357899999998763            237


Q ss_pred             CCEEEEcccCCCCCC----------CCCChHHHHHHHHHHHHHHHHHHHHc----------C-CeEEEEcCCccccCCCC
Q 022900          181 VDQIYHLACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKRV----------G-ARFLLTSTSEVYGDPLQ  239 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----------~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~-~riV~vSS~~vyg~~~~  239 (290)
                      +|+||||||......          ..++++.++++|+.++.++++++.+.          + .+||++||.+.+...  
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--  164 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--  164 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC--
Confidence            999999999754322          22345778999999999999998653          3 389999998876421  


Q ss_pred             CCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          240 HPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       240 ~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                              ....+|+.+|.+.+.+++.+..+   .++++++++|+.+.
T Consensus       165 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  204 (265)
T 2o23_A          165 --------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG  204 (265)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEecccc
Confidence                    12357999999988888888776   48899999998764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.81  E-value=4.4e-19  Score=155.88  Aligned_cols=157  Identities=13%  Similarity=0.034  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCCCC-chhhhhcccCCCCeEEEEcccccc-c------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEP-L------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~-~~~~~~~~~~~~~v~~~~~D~~~~-~------------~  178 (290)
                      +++|+|+||||+||||.+++++|+++|++ |++++|+... ..+.+.......++.++.+|++++ .            +
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            56789999999999999999999999996 9999986421 112222222245788999999976 2            2


Q ss_pred             cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--------~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .++|+||||||..    ..+++++++++|+.|+.++++++.+.        +.+||++||.+.|....          ..
T Consensus        83 g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  148 (254)
T 1sby_A           83 KTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH----------QV  148 (254)
T ss_dssp             SCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------TS
T ss_pred             CCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC----------Cc
Confidence            3799999999963    34678899999999999999998642        23799999988764211          23


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       149 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~  185 (254)
T 1sby_A          149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR  185 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCcc
Confidence            57999999999988888765   68999999998775

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.81  E-value=3.4e-19  Score=157.25  Aligned_cols=161  Identities=11%  Similarity=-0.001  Sum_probs=122.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999986543333333222 2357899999998763            247


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~-----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.......    .++++.++++|+.|++++++++.     +.+ .+||++||...+....          ..
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  153 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP----------GV  153 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT----------TC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC----------Cc
Confidence            9999999996543322    23457789999999999999873     332 4999999987653211          23


Q ss_pred             ChhhhhHHHHHHHHHHHHH----HhCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFIS----QFRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~----~~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.++.    .+|+++..++|+.+.
T Consensus       154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~  191 (257)
T 3imf_A          154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIE  191 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCc
Confidence            5799999998888877774    348999999999775

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.81  E-value=1.2e-19  Score=159.75  Aligned_cols=161  Identities=16%  Similarity=0.053  Sum_probs=121.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--------CCCeEEEEccccccc--------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--------NPNFELIRHDVVEPL--------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~v~~~~~D~~~~~--------  177 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+.....+....+..        ..++.++.+|++++.        
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999864332222222211        146889999998763        


Q ss_pred             ----ccCC-CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEcCCccc-cCCCCCC
Q 022900          178 ----LLEV-DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVY-GDPLQHP  241 (290)
Q Consensus       178 ----~~~v-D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~riV~vSS~~vy-g~~~~~~  241 (290)
                          +.++ |+||||||......    ..++++.++++|+.|+.++++++.+.    +  .+||++||.+.+ +.+    
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  160 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV----  160 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT----
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC----
Confidence                2346 99999999754322    22346778999999999999987543    3  489999998644 321    


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          242 QKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       242 ~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                             ...+|+.+|.+.+.+++.+..+   +|++++++||+.+..
T Consensus       161 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  200 (264)
T 2pd6_A          161 -------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIAT  200 (264)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             -------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccc
Confidence                   2357999999999999888876   689999999997753

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.81  E-value=3.4e-19  Score=158.54  Aligned_cols=154  Identities=16%  Similarity=0.089  Sum_probs=120.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ...++|+|+||||+|+||.+++++|+++|++|++++|+....         ...+..+.+|++++.            +.
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------VNVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            557899999999999999999999999999999999864322         125677889998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||........    +++++++++|+.|++++++++.+    .+ .+||++||.+.|....          ..
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  150 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK----------NA  150 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT----------TC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC----------CC
Confidence            799999999975433322    23566899999999999998643    34 4999999988774221          23


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh--CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF--RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.++  ++.+..++|+.+.
T Consensus       151 ~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~  186 (269)
T 3vtz_A          151 AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIM  186 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCc
Confidence            589999999999999999887  7778888888764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.81  E-value=2.9e-19  Score=159.10  Aligned_cols=162  Identities=14%  Similarity=0.061  Sum_probs=124.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c-
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L-  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~-  178 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|++++.            + 
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999986432222222221 2457889999998763            2 


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||.......    .++++.++++|+.|+.++++++.    +.+ .+||++||.+.|....          .
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~  167 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP----------S  167 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT----------T
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC----------C
Confidence            579999999997543322    23456789999999999999874    334 4999999998775321          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  205 (273)
T 1ae1_A          168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVIL  205 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence            3589999999999998888765   8999999998764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.81  E-value=1.6e-19  Score=160.55  Aligned_cols=162  Identities=15%  Similarity=0.023  Sum_probs=122.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC-CCCCchhhhhccc--CCCCeEEEEcccccc----c---------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN-FFTGRKENVMHHF--GNPNFELIRHDVVEP----L---------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~v~~~~~D~~~~----~---------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++| +.....+...++.  ...++.++.+|++++    .         
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            56789999999999999999999999999999998 4322222222211  135788999999887    3         


Q ss_pred             ---ccCCCEEEEcccCCCCCCCC---------------CChHHHHHHHHHHHHHHHHHHHHc---C-------CeEEEEc
Q 022900          178 ---LLEVDQIYHLACPASPVHYK---------------FNPVKTIKTNVVGTLNMLGLAKRV---G-------ARFLLTS  229 (290)
Q Consensus       178 ---~~~vD~vih~Ag~~~~~~~~---------------~~~~~~~~~Nv~gt~~ll~a~~~~---~-------~riV~vS  229 (290)
                         +.++|+||||||........               ++++.++++|+.|+.++++++.+.   +       .+||++|
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is  168 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  168 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence               13699999999975433221               345678999999999999998763   2       4899999


Q ss_pred             CCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          230 TSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       230 S~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                      |.+.+...          ....+|+.+|.+.+.+.+.+..++   |+.+++++|+.+.-
T Consensus       169 S~~~~~~~----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t  217 (276)
T 1mxh_A          169 DAMTDLPL----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL  217 (276)
T ss_dssp             CGGGGSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred             chhhcCCC----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence            98876421          123579999999999998888765   89999999988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.81  E-value=2.4e-19  Score=161.15  Aligned_cols=163  Identities=13%  Similarity=0.017  Sum_probs=124.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~------------  177 (290)
                      ..+++|+|+||||+||||.+++++|+++|++|++++|+.....+....+..  ..++.++.+|+++..            
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999864322222222111  357899999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH-----cC-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR-----VG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~-----~~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +.++|+||||||......    ..++++.++++|+.|+.++++++.+     .+ .+||++||.+.+...          
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  171 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS----------  171 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------
Confidence            236899999999653322    2234577899999999999888743     23 489999998765321          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.+..+   +|++++++||+.+.
T Consensus       172 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~  211 (302)
T 1w6u_A          172 GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIK  211 (302)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCC
Confidence            13358999999999999998887   68999999999885

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.81  E-value=2.1e-19  Score=157.01  Aligned_cols=160  Identities=16%  Similarity=0.026  Sum_probs=121.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc-c-CCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-F-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +|+++||||+|+||.+++++|+++|++|++++|+.....+....+ . ...++.++.+|++++.            +.++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999998643222222221 1 1346899999998763            2379


Q ss_pred             CEEEEcccCCCCCC-------CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       182 D~vih~Ag~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      |+||||||......       ..++++.++++|+.|+.++++++.    +.+ .+||++||.+.+...          ..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~  151 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF----------PG  151 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TT
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------CC
Confidence            99999999754322       123457789999999998887764    334 499999998776421          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                      ..+|+.+|.+.+.+++.+..++   |++++++||+.+..
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  190 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIET  190 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcc
Confidence            3589999999999999988776   89999999998753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.81  E-value=3.9e-19  Score=158.90  Aligned_cols=164  Identities=14%  Similarity=-0.004  Sum_probs=124.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------  177 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+.....+.+ ..+. ...++.++.+|++++.            
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999999998643222221 1111 2457889999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV--G-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +.++|+||||||......    ..++++.++++|+.|+.++++++.+.  + .+||++||.+.+....         ...
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~  175 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV---------PKH  175 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC---------SSC
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC---------CCC
Confidence            247999999999754332    22346778999999999999998775  3 4999999986542110         123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.+   +|+++.+++|+.+.
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  212 (283)
T 1g0o_A          176 AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIK  212 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence            57999999999999888865   48999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.81  E-value=3.1e-19  Score=155.71  Aligned_cols=160  Identities=13%  Similarity=0.067  Sum_probs=112.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEe-CCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++ |+.....+....+. ...++.++.+|++++.            +.
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999994 43322222111111 2457899999998763            23


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCC-ccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTS-EVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~-~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||......    ..+++++++++|+.|+.++++++.+    .+ .+||++||. +.|+.+           .
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~  151 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA-----------G  151 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-----------C
Confidence            7999999999753222    3345778999999999999888753    34 499999997 456532           2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..++   ++++++++|+.+.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  189 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIK  189 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEe
Confidence            3589999999999999988765   7888899998764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.81  E-value=3.2e-19  Score=163.06  Aligned_cols=162  Identities=15%  Similarity=0.061  Sum_probs=122.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC-Cchhhhhccc-----CCCCeEEEEccccccc----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT-GRKENVMHHF-----GNPNFELIRHDVVEPL----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~-----~~~~v~~~~~D~~~~~----------  177 (290)
                      +++|+|+||||+||||.++++.|+++|++|++.+|+.. +..+.+....     ...++.++.+|++++.          
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999998743 3333222211     2457999999998863          


Q ss_pred             --ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                        ++++|+||||||.......    .+++++++++|+.|+.++++++    ++.+ .+||++||.+.++....       
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~-------  155 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP-------  155 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS-------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC-------
Confidence              2479999999997533222    2345678999999999999998    4444 48999999877632111       


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        ...+|+.+|.+.+.+++.+..+   +|+++++++|+.++
T Consensus       156 --~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~  194 (324)
T 3u9l_A          156 --YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFT  194 (324)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-
T ss_pred             --cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccc
Confidence              1357999999999999998877   58999999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.81  E-value=1.8e-19  Score=159.07  Aligned_cols=161  Identities=12%  Similarity=-0.035  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC-chhhhhcccC--CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVMHHFG--NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~--~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+... ..+....+..  ..++.++.+|++++.            +
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999986433 2222221111  356888999998763            2


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||......    ..++++.++++|+.|+.++++++.+    .+ .+||++||.+.+...          ..
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  151 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----------AN  151 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC----------CC
Confidence            47999999999754322    2234577899999999999998743    34 499999998775321          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..++   |++++.++|+.+.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  189 (260)
T 1x1t_A          152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVR  189 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCcc
Confidence            3589999999999999888765   7889999998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.81  E-value=2.3e-19  Score=160.39  Aligned_cols=160  Identities=15%  Similarity=0.028  Sum_probs=123.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+....+  ..++.++.+|++++.            +.+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999998643333333332  457889999998873            247


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    .+++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ....
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~~~~  173 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV----------GGTG  173 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------TTBH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------CCch
Confidence            9999999997643332    234567899999999999998753    33 389999998765321          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  209 (277)
T 3gvc_A          174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVD  209 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcc
Confidence            8999999999998888876   58899999998774

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.81  E-value=4.1e-19  Score=158.40  Aligned_cols=162  Identities=15%  Similarity=0.044  Sum_probs=124.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-----------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-----------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-----------~~  179 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|.. ...+...++. ...++.++.+|+++..           +.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            346789999999999999999999999999999999642 2222222222 2457899999998763           24


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||.......    .+++++++++|+.|++++++++.    +.+ .+||++||.+.+....          ..
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~----------~~  175 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR----------NV  175 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS----------SC
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC----------CC
Confidence            79999999997654332    23457789999999999999873    344 4899999987763211          23


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  212 (273)
T 3uf0_A          176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVV  212 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence            57999999999999998877   58899999998774

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.81  E-value=5.9e-19  Score=156.48  Aligned_cols=151  Identities=15%  Similarity=0.075  Sum_probs=120.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+...          ..++.++.+|++++.            +.++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999986432          246788999998763            2379


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||......    ..+++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ....+
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  145 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT----------KNASA  145 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC----------TTBHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC----------CCchh
Confidence            99999999754332    2234677899999999999998754    23 499999998776421          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHhC--CCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..+++  +.+++++|+.+.
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~  179 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYAPLLRCNAVCPATID  179 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCc
Confidence            99999999999999988776  778888888764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.81  E-value=2.7e-19  Score=157.87  Aligned_cols=161  Identities=15%  Similarity=0.026  Sum_probs=122.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|+.++.            +.+
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999986432222222221 2356888999998763            237


Q ss_pred             CCEEEEcccCCCC-CC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.... ..    ..+++++++++|+.|+.++++++.    +.+ .+||++||.+.|...          ...
T Consensus        92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  161 (260)
T 2zat_A           92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF----------PNL  161 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------TTB
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC----------CCc
Confidence            9999999996431 11    123457789999999999999864    344 499999999887421          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++   |+++++++|+.+.
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  198 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIK  198 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECccc
Confidence            579999999999998888765   8899999998764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.81  E-value=3.2e-19  Score=159.24  Aligned_cols=163  Identities=14%  Similarity=0.064  Sum_probs=124.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc--------hhhhhc----c-cCCCCeEEEEccccccc--
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--------KENVMH----H-FGNPNFELIRHDVVEPL--  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~--------~~~~~~----~-~~~~~v~~~~~D~~~~~--  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+....        .+.+..    . ....++.++.+|++++.  
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            36789999999999999999999999999999999863211        111111    1 12457999999998863  


Q ss_pred             ----------ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCC
Q 022900          178 ----------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPL  238 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~  238 (290)
                                +.++|+||||||.......    .+++++++++|+.|++++++++.    +.+ .+||++||.+.+....
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF  166 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence                      2479999999997643332    23457789999999999999863    334 4999999987763211


Q ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          239 QHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       239 ~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                                ...+|+.+|.+.+.+.+.++.+   +|+++..++|+.+.-
T Consensus       167 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t  206 (281)
T 3s55_A          167 ----------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIET  206 (281)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence                      2357999999999999999886   589999999998753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.81  E-value=1.2e-19  Score=161.61  Aligned_cols=166  Identities=17%  Similarity=0.041  Sum_probs=124.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC--------Cchhhhhcc---c--CCCCeEEEEccccccc--
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT--------GRKENVMHH---F--GNPNFELIRHDVVEPL--  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~---~--~~~~v~~~~~D~~~~~--  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+..        ...+.+...   .  ...++.++.+|++++.  
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            367899999999999999999999999999999998621        112222111   1  2457999999998763  


Q ss_pred             ----------ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCC
Q 022900          178 ----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHP  241 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~  241 (290)
                                +.++|+||||||........+++++++++|+.|++++++++.+    .+  .+||++||.+.+.....  
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  167 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS--  167 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc--
Confidence                      2479999999998654444556788999999999999998643    32  48999999876532100  


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          242 QKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       242 ~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         .. ....+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       168 ---~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  209 (278)
T 3sx2_A          168 ---AD-PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVE  209 (278)
T ss_dssp             ---SS-HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred             ---CC-CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCcc
Confidence               00 012469999999999999888765   6899999998875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.81  E-value=2.7e-19  Score=159.72  Aligned_cols=162  Identities=12%  Similarity=0.055  Sum_probs=122.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++....++.++.+|++++.            +.+
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            36789999999999999999999999999999999864332222222222237888999998763            247


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-----CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-----ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-----~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +|+||||||......    ..++++.++++|+.|+.++++++.    +.+     .+||++||.+.+....         
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~---------  176 (276)
T 2b4q_A          106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG---------  176 (276)
T ss_dssp             CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC---------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC---------
Confidence            999999999754332    223467799999999999988864    222     4899999987764211         


Q ss_pred             CCCC-hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          248 GNVN-PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~-py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ... +|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       177 -~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~  216 (276)
T 2b4q_A          177 -EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFP  216 (276)
T ss_dssp             -CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             -CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence             113 79999999999998888764   8899999998764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.81  E-value=1.5e-19  Score=159.90  Aligned_cols=162  Identities=16%  Similarity=0.021  Sum_probs=123.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+|+||||+||||.+++++|+++|++|++++|......+.+ .++. ...++.++.+|++++.            +
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            367899999999999999999999999999999998322211111 1111 2457889999998763            1


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccc-cCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVY-GDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vy-g~~~~~~~~E~~~~~~  250 (290)
                      .++|+||||||......    ..++++.++++|+.|+.++++++.+.   +.+||++||.+.| ...          ...
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~  167 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI----------PNH  167 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC----------CSC
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC----------CCC
Confidence            37999999999754322    12335678999999999999998764   3599999998876 321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++   ++.+++++|+.+.
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~  204 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK  204 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence            579999999999999988775   8999999998764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.81  E-value=6.2e-19  Score=154.41  Aligned_cols=161  Identities=12%  Similarity=-0.006  Sum_probs=121.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCe-EEEEccccccc-----------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-ELIRHDVVEPL-----------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~-----------~~~v  181 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++  ..++ .++.+|++++.           +.++
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            57789999999999999999999999999999998643222222222  2355 88999998763           2479


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||........    +++++++++|+.|+.++++++.    +.+ .+||++||.+.+.....        .+..+
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~~~  158 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP--------QFASS  158 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------SCBHH
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC--------CcchH
Confidence            9999999975443322    2346789999999888888763    344 49999999887643211        12358


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..++   |++++++||+.+.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~  193 (254)
T 2wsb_A          159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVA  193 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccC
Confidence            9999999999999888775   8999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.81  E-value=5.1e-19  Score=158.02  Aligned_cols=164  Identities=16%  Similarity=0.034  Sum_probs=125.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999997544443333322 2457889999998773            24


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||.......    .+++++++++|+.|++++++++.+    .+  .+||++||.+.+.....        ..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------~~  180 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------QQ  180 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS--------SC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC--------CC
Confidence            79999999997654332    234566889999999999998743    22  48999999876532110        12


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.+   +|+.+..++|+.+.
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  218 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR  218 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            357999999999999998877   58889999998774

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.81  E-value=4.3e-19  Score=157.22  Aligned_cols=161  Identities=9%  Similarity=0.027  Sum_probs=123.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999986433333222221 2457999999998873            247


Q ss_pred             CCEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||..... .    ..+++++++++|+.|+.++++++.    +.+.+||++||...+....          ...
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  158 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA----------KYG  158 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT----------TCH
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC----------ccH
Confidence            99999999874221 1    123467789999999999999864    3345999999987653211          224


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  194 (264)
T 3ucx_A          159 AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIW  194 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence            7999999999999888876   58999999998773

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.81  E-value=2.7e-19  Score=159.90  Aligned_cols=161  Identities=14%  Similarity=0.001  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+.....+...+.  ..++.++.+|++++.            +.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3467899999999999999999999999999999998643333222222  357889999998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||........    +++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ...
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  170 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI----------ADR  170 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC----------TTB
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC----------CCC
Confidence            799999999976443322    34567899999999999998743    33 399999998776321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       171 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  207 (277)
T 4dqx_A          171 TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTID  207 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCc
Confidence            589999999999999888775   7889999998764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.81  E-value=2.8e-19  Score=158.15  Aligned_cols=160  Identities=14%  Similarity=0.080  Sum_probs=121.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+...++  ..++.++.+|++++.            +.++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998643222222222  124888999998763            2379


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++    ++.+ .+||++||.+.|....          ...+
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  152 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------ACHG  152 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC----------Cchh
Confidence            999999997543322    2345678999999998887765    3444 4999999988764211          2257


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      |+.+|.+.+.+.+.+..+   +|+++++++|+.+.-
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  188 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKT  188 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCC
Confidence            999999999999888876   589999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.81  E-value=4.9e-19  Score=154.97  Aligned_cols=161  Identities=13%  Similarity=-0.004  Sum_probs=119.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQ  183 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~  183 (290)
                      ...++|+|+||||+|+||.++++.|+++|++|++++|+.....+.....  ..++.++.+|+.+..        ..++|+
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL--KDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--ccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            4468899999999999999999999999999999998543322222222  247888999998763        246999


Q ss_pred             EEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       184 vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||||......    ..++++.++++|+.|+.++++++.+    .+ .+||++||.+.+....          ...+|+
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  157 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP----------GQANYC  157 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS----------CSHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC----------CCchhH
Confidence            999999764322    3456788999999999999988743    33 4999999987663211          235799


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+++.+..+   .|+.+.+++|+.+.
T Consensus       158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  190 (249)
T 3f9i_A          158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIK  190 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccc
Confidence            9999999989888876   47888899998764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.81  E-value=3.3e-19  Score=155.34  Aligned_cols=158  Identities=18%  Similarity=0.141  Sum_probs=120.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++|+|+||||+||||.+++++|+++|++|++++|+.....+...+.   ..++++.+|++++.        +.++|+||
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---PGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            56789999999999999999999999999999998532222221111   24667789998763        23689999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      ||||.......    .++++.++++|+.++.++++++.+    .+  .+||++||.+.+...          ....+|+.
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~  151 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV----------TNHSVYCS  151 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------TTBHHHHH
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC----------CCCchHHH
Confidence            99997543221    234567899999999999998754    23  489999998776421          12358999


Q ss_pred             hHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|.+.+.+++.+..+   .++++++++|+.+.
T Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~  183 (244)
T 3d3w_A          152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVM  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEecccc
Confidence            999999999998876   47899999998874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.81  E-value=1.8e-19  Score=158.51  Aligned_cols=159  Identities=15%  Similarity=0.050  Sum_probs=121.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+...++  ..++.++.+|++++.            +.++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57889999999999999999999999999999998643222222222  357889999998763            2468


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++.+    .+.+||++||.+.+...          ....+|
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y  151 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI----------EQYAGY  151 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC----------TTBHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCC----------CCCccH
Confidence            999999997543322    234567899999999988887543    33589999998876421          122479


Q ss_pred             hhhHHHHHHHHHHHHHHh-----CCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQF-----RPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~lr  284 (290)
                      +.+|.+.+.+++.+..++     |+++++++|+.+.
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~  187 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIY  187 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCcc
Confidence            999999998888887663     8999999999874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.81  E-value=1.6e-19  Score=159.42  Aligned_cols=159  Identities=14%  Similarity=0.097  Sum_probs=125.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.  ..++.++.+|++++.            +.++
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999998643322222222  357899999998763            2479


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |++|||||......    ..+++++++++|+.|+.++++++.+..   .+||++||.+.+....          ...+|+
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  153 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP----------GMSVYS  153 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT----------TBHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------CchHHH
Confidence            99999999764333    223467789999999999999987642   3899999987654211          235799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+.+.++.++   |+++..++|+.+.
T Consensus       154 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  186 (255)
T 4eso_A          154 ASKAALVSFASVLAAELLPRGIRVNSVSPGFID  186 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEecCccc
Confidence            99999999999988875   8999999998775

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.80  E-value=3.6e-19  Score=157.42  Aligned_cols=161  Identities=11%  Similarity=-0.045  Sum_probs=122.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.+...+....+. ...++.++.+|++++.            +.+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999986543333222221 2457899999998763            246


Q ss_pred             CCEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||..... .    ..++++.++++|+.|+.++++++..    .+ .+||++||.+.+...          ...
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  176 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV----------ADG  176 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC----------TTC
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC----------CCC
Confidence            99999999973221 1    2234567899999999999998643    33 499999998765321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.+   .|+++..++|+.+.
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~  213 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVR  213 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCc
Confidence            57999999999998888876   58999999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.80  E-value=2.1e-19  Score=157.85  Aligned_cols=159  Identities=19%  Similarity=0.176  Sum_probs=123.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.+...+...+.  ..++.++.+|++++.            +.++
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            67899999999999999999999999999999998644333333332  457889999998763            2479


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHH----HHHcC--CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGL----AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a----~~~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||.......    .+++++++++|+.|+++++++    +++.+  .+||++||...+....          ...
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  151 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP----------NMA  151 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT----------TCH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC----------Cch
Confidence            999999997643332    234577899999999999998    44444  3999999987653211          235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.+   +|+.+..++|+.+.
T Consensus       152 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  187 (247)
T 3rwb_A          152 AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIE  187 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCc
Confidence            8999999999999888877   58899999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.80  E-value=3.5e-19  Score=158.16  Aligned_cols=163  Identities=15%  Similarity=0.041  Sum_probs=122.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc--cCCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~------------  177 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+.....+...++  ....++.++.+|++++.            
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999998643322222211  01356888999998763            


Q ss_pred             ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-ccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg~~~~~~~~E~~~  247 (290)
                      +.++|+||||||.......    .++++.++++|+.|+.++++++.+    .+ .+||++||.++ +..          .
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~  166 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----------M  166 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----------S
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC----------C
Confidence            2479999999997543322    123567899999999999998743    33 49999999863 210          0


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.+..+   +|+++++++|+.+.
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  206 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR  206 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence            12357999999999988888876   48999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.80  E-value=1.1e-18  Score=153.16  Aligned_cols=152  Identities=16%  Similarity=0.073  Sum_probs=119.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+...     .    ...+.++.+|++++.            +.++
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E----QYPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999986431     1    112778889998763            2479


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||......    ..+++++++++|+.|+.++++++    ++.+ .+||++||.+.+...          ....+
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~  145 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR----------IGMSA  145 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------TTCHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC----------CCCch
Confidence            99999999754322    22346778999999999999987    3333 599999998776321          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  180 (250)
T 2fwm_X          146 YGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD  180 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCCEEEEEECCccc
Confidence            9999999999998888764   8999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.80  E-value=2.1e-19  Score=159.51  Aligned_cols=162  Identities=12%  Similarity=0.095  Sum_probs=124.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+|+||||+|+||.++++.|+++|++|++++|+.+...+...++.  ...++.++.+|++++.            +
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999986433333222221  2457999999998874            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      .++|+||||||.......    .++++.++++|+.|+.++++++.+    .+  .+||++||.+.+...          .
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  166 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL----------P  166 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC----------C
Confidence            479999999997654332    233567899999999999998743    23  399999998776321          1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+.+.++.++   |+++..++|+.+.
T Consensus       167 ~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~  205 (266)
T 4egf_A          167 DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVL  205 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence            23579999999999998888764   8889999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.80  E-value=3.9e-19  Score=159.32  Aligned_cols=163  Identities=17%  Similarity=0.053  Sum_probs=122.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|++++.            +++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999986543333333332 2457899999998863            247


Q ss_pred             CCEEEEcccCCCC-CC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.... ..    ..+++++++++|+.|++++++++    ++.+ .+||++||.+.+.....        ...
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------~~~  177 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT--------PGA  177 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS--------TTC
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC--------CCc
Confidence            9999999997532 11    12345678999999999999987    4444 49999999865421100        123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  214 (283)
T 3v8b_A          178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIE  214 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCc
Confidence            579999999999999998874   6788889888764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.80  E-value=3.1e-19  Score=158.15  Aligned_cols=162  Identities=15%  Similarity=0.073  Sum_probs=121.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.+...+...++.   ...++.++.+|++++.            
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999986433222222211   1457889999998763            


Q ss_pred             ccCCCEEEEcccCCCC-CC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +.++|+||||||.... ..    ..+++++++++|+.|+.++++++    ++.+ .+||++||.+.+...          
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  159 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------  159 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC----------
Confidence            2369999999997543 21    12346778999999999887765    3444 599999998765311          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+.+.++.+   +|+++++++|+.+.
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  199 (267)
T 1iy8_A          160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIW  199 (267)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCc
Confidence            12357999999998888888876   48999999998764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.80  E-value=3.2e-19  Score=156.94  Aligned_cols=161  Identities=14%  Similarity=-0.008  Sum_probs=120.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC-CCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN-FFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++| +.....+....+. ...++.++.+|++++.            +.
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999998 3222121111111 2356889999998763            23


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||......    ..+++++++++|+.|+.++++++.+    .+  .+||++||...+...          .+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~  154 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------PL  154 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------TT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC----------CC
Confidence            7999999999754322    1234567899999999999888643    33  499999998665311          13


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..++   +++++++||+.+.
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  192 (261)
T 1gee_A          155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN  192 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcC
Confidence            3589999999988888888765   8999999999875

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=4.3e-19  Score=155.43  Aligned_cols=158  Identities=14%  Similarity=-0.004  Sum_probs=121.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+.. +   ..++.++.+|++++.        +.++|+||
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---ccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            56789999999999999999999999999999998532222111 1   137889999998763        35799999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhh
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY  256 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~  256 (290)
                      ||||.......    .++++.++++|+.|+.++++++.+    .+ .+||++||.+.+....         ....+|+.+
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~Y~~s  150 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---------VNRCVYSTT  150 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---------TTBHHHHHH
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC---------CCCccHHHH
Confidence            99997543322    234567899999999999998753    34 4999999987653211         022579999


Q ss_pred             HHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          257 FFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       257 k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |.+.+.+++.+..++   |+++++++|+.+.
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  181 (246)
T 2ag5_A          151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVD  181 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCEE
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCcCc
Confidence            999999999888764   8999999999875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.80  E-value=6.9e-19  Score=157.10  Aligned_cols=162  Identities=14%  Similarity=0.040  Sum_probs=126.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccccc-----------cC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL-----------LE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~-----------~~  180 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++..           .+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999997665554443332 34678999999987631           37


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    .++++.++++|+.|++++++++.    +.+ .+||++||.+.+...          ....
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~~~~  179 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK----------SVVT  179 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTBH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC----------CCch
Confidence            9999999997544332    23456789999999999999873    334 499999998766411          1224


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       180 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  215 (275)
T 4imr_A          180 AYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVD  215 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEEecccc
Confidence            69999999999999888875   7888899988764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.80  E-value=3.5e-19  Score=159.02  Aligned_cols=161  Identities=16%  Similarity=0.062  Sum_probs=122.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC---------Cchhhhhc----cc-CCCCeEEEEccccccc--
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT---------GRKENVMH----HF-GNPNFELIRHDVVEPL--  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~----~~-~~~~v~~~~~D~~~~~--  177 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+..         +..+.+.+    +. ...++.++.+|++++.  
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            67899999999999999999999999999999998421         12222211    11 2457899999998763  


Q ss_pred             ----------ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCC
Q 022900          178 ----------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDP  237 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~  237 (290)
                                +.++|+||||||.......    .+++++++++|+.|++++++++.    +.+  .+||++||.+.+...
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT  172 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence                      2479999999997654332    23456789999999999999874    333  489999998765321


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .          ...+|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       173 ~----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  212 (280)
T 3pgx_A          173 P----------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVE  212 (280)
T ss_dssp             T----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             C----------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence            1          2257999999999999988876   68999999998875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.80  E-value=4.2e-19  Score=158.84  Aligned_cols=162  Identities=17%  Similarity=0.061  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC------------Cchhhhhcc----c-CCCCeEEEEccccc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT------------GRKENVMHH----F-GNPNFELIRHDVVE  175 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~------------~~~~~~~~~----~-~~~~v~~~~~D~~~  175 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+..            +..+.+.+.    . ...++.++.+|+++
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            467899999999999999999999999999999998621            112222211    1 24579999999987


Q ss_pred             cc------------ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCc
Q 022900          176 PL------------LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSE  232 (290)
Q Consensus       176 ~~------------~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~  232 (290)
                      +.            +.++|+||||||......     ..+++++++++|+.|++++++++.+    .+  .+||++||.+
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            63            247999999999754432     2234677999999999999998743    22  3899999987


Q ss_pred             cccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          233 VYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       233 vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+....          ...+|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+.
T Consensus       168 ~~~~~~----------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~  212 (286)
T 3uve_A          168 GLKAYP----------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVK  212 (286)
T ss_dssp             GTSCCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred             hccCCC----------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence            653211          2257999999999999988876   57889999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.80  E-value=3.7e-19  Score=160.28  Aligned_cols=162  Identities=14%  Similarity=0.022  Sum_probs=125.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC-Cchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT-GRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|... ...+.+....  ...++.++.+|++++.            
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999987522 1112222111  2457899999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +.++|+||||||......     ..+++++++++|+.|++++++++.+..   .+||++||.+.|....          .
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~  195 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP----------H  195 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT----------T
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC----------C
Confidence            247999999999753221     223467799999999999999987653   3899999998775221          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.++   |+++..++|+.+.
T Consensus       196 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  233 (294)
T 3r3s_A          196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIW  233 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCc
Confidence            3579999999999999988875   8999999999875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=4.1e-19  Score=159.85  Aligned_cols=162  Identities=14%  Similarity=0.073  Sum_probs=122.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc------CCCCeEEEEccccccc---------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF------GNPNFELIRHDVVEPL---------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~---------  177 (290)
                      .+++|+|+||||+||||.+++++|+++|++|++++|+.....+...++.      ...++.++.+|++++.         
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999986433222222211      2457899999998763         


Q ss_pred             ---ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH-----cCCeEEEEcCCccccCCCCCCCCCC
Q 022900          178 ---LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR-----VGARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 ---~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~-----~~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                         +.++|+||||||.......    .++++.++++|+.|+.++++++.+     .+.+||++||.+.++.+        
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  166 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP--------  166 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT--------
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCC--------
Confidence               2369999999996432221    233567899999999999999765     23489999998733311        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                         ....|+.+|.+.+.+.+.+.+++   |++++++||+.+..
T Consensus       167 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  206 (303)
T 1yxm_A          167 ---LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYS  206 (303)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCC
T ss_pred             ---cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCccc
Confidence               22479999998888888888775   89999999998854

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.80  E-value=7e-19  Score=155.59  Aligned_cols=162  Identities=15%  Similarity=0.052  Sum_probs=124.4

Q ss_pred             CCCCCEEEEEcCCc-hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          113 KRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG-~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      .+++|+|+||||+| +||.+++++|+++|++|++++|+.....+...++.  ...++.++.+|++++.            
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            46789999999997 79999999999999999999986544333333322  2357999999998763            


Q ss_pred             ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc-----C-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV-----G-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~-----~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +.++|+||||||.......    .++++.++++|+.|+.++++++.+.     + .+||++||.+.+...          
T Consensus        99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  168 (266)
T 3o38_A           99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ----------  168 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----------
T ss_pred             hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----------
Confidence            2479999999997544332    2345678999999999999987542     3 389999998765311          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.++.+   +|+.+..++|+.+.
T Consensus       169 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  208 (266)
T 3o38_A          169 HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR  208 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCccc
Confidence            12357999999999999988876   58889999998764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.80  E-value=3.4e-19  Score=157.55  Aligned_cols=160  Identities=14%  Similarity=0.030  Sum_probs=121.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++|+++||||+|+||.+++++|+++|++|+++ +|+.....+....+. ...++.++.+|++++.            +.+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 654322222222221 2457999999998773            247


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    .++++.++++|+.|++++++++.    +.+ .+||++||.+.+...          ....
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  152 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL----------ENYT  152 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC----------TTCH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC----------CCcH
Confidence            8999999996543322    23456789999999999999874    333 399999998765321          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       153 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  188 (258)
T 3oid_A          153 TVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAID  188 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            89999999999999998875   7888899998774

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=1.2e-18  Score=153.60  Aligned_cols=156  Identities=19%  Similarity=0.149  Sum_probs=119.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+... .+...++ .  + .++.+|++++.            +.++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-G--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-T--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-h--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999987544 3322222 2  4 78899998763            2479


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||........    +++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ....+
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~  148 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------QENAA  148 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------TTBHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------CCChh
Confidence            9999999976433322    23567899999999999998753    34 499999998754211          12257


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..++   |+++.+++|+.+.
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  183 (256)
T 2d1y_A          149 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA  183 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCcc
Confidence            9999999999998888764   7888999998764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.80  E-value=3.2e-19  Score=157.54  Aligned_cols=163  Identities=15%  Similarity=0.166  Sum_probs=122.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC--CCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+|+++||||+|+||.+++++|+++|++|++++|+.....+.+.+...  ..++.++.+|++++.            +.
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999998764433333332221  357999999998763            23


Q ss_pred             CCCEEEEcccCCC--CCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|+||||||...  ...    ..+++++++++|+.|+.++++++    ++.+ .+||++||.+.++...        +.
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------~~  156 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG--------WI  156 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC--------CT
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC--------CC
Confidence            7999999999421  111    12345678999999999999987    4445 4999999986653221        11


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.++.+   +|+++..++|+.+.
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDII  195 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCcc
Confidence            3358999999999999888876   58999999998875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.80  E-value=2.7e-19  Score=160.22  Aligned_cols=162  Identities=14%  Similarity=0.033  Sum_probs=124.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.+
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999986443333333322 2457899999998763            247


Q ss_pred             CCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||......     ..+++++++++|+.|++++++++.+    .+ .+||++||...+...         ....
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~  156 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG---------FAGV  156 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC---------CTTC
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC---------CCCc
Confidence            999999999753211     2234677899999999999998643    33 399999998766211         1123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  193 (280)
T 3tox_A          157 APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTD  193 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCC
Confidence            579999999999999988775   8899999998775

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.80  E-value=7.7e-19  Score=156.07  Aligned_cols=164  Identities=16%  Similarity=0.021  Sum_probs=124.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|++++++.....+.+...+  ...++.++.+|++++.            
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999998875433222222211  2467899999998863            


Q ss_pred             ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +.++|+||||||......    ..+++++++++|+.|++++++++.+..   .+||++||.......         ....
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~  164 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS---------VPKH  164 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC---------CTTC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC---------CCCC
Confidence            247999999999764333    223467789999999999999987653   389999997632100         0123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  201 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTV  201 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCcc
Confidence            57999999999999988877   48999999998764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.80  E-value=4.4e-19  Score=157.59  Aligned_cols=157  Identities=14%  Similarity=0.042  Sum_probs=120.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ..++|+++||||+|+||.++++.|+++|++|++++|+.    +.+... ...++.++.+|++++.            +++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKAL-NLPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH----HHHHTT-CCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHh-hcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            35678999999999999999999999999999999753    222222 2347889999998863            247


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||........    +++++++++|+.|++++++++.    +.+ .+||++||.+.+...          ....
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~~  157 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF----------PDHA  157 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------TTCH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC----------CCCc
Confidence            99999999976433322    3356789999999999888764    344 599999998766321          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.+   +|+++..++|+.+.
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (266)
T 3p19_A          158 AYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVK  193 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccc
Confidence            7999999999988888876   48999999998775

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.80  E-value=4.9e-19  Score=159.73  Aligned_cols=163  Identities=15%  Similarity=0.005  Sum_probs=124.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC--------Cchhhhhc----cc-CCCCeEEEEccccccc-
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT--------GRKENVMH----HF-GNPNFELIRHDVVEPL-  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~----~~-~~~~v~~~~~D~~~~~-  177 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+..        +..+.+..    +. ...++.++.+|++++. 
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            3467899999999999999999999999999999998632        11222211    11 2467999999998763 


Q ss_pred             -----------ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCcccc
Q 022900          178 -----------LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYG  235 (290)
Q Consensus       178 -----------~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg  235 (290)
                                 +.++|+||||||......     ..++++.++++|+.|++++++++..    .+  .+||++||.+.+.
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence                       247999999999764432     2234577999999999999998643    22  3899999987653


Q ss_pred             CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          236 DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       236 ~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...          ...+|+.+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       184 ~~~----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  225 (299)
T 3t7c_A          184 GAE----------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVA  225 (299)
T ss_dssp             CCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred             CCC----------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcc
Confidence            211          23579999999999999888775   8899999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.80  E-value=8.7e-19  Score=154.28  Aligned_cols=159  Identities=13%  Similarity=-0.034  Sum_probs=121.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+..  .+...++. ...++.++.+|++++.            +.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999998654  22222221 1346888999998763            237


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||......    ..+++++++++|+.|++++++++    ++.+ .+||++||.+.+....          ...
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  149 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST----------GKA  149 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------TBH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC----------Cch
Confidence            999999999754322    12345678999999988887775    4555 4999999987764211          225


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  185 (255)
T 2q2v_A          150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVL  185 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCc
Confidence            79999999999999888774   7888999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=4.2e-19  Score=158.47  Aligned_cols=162  Identities=12%  Similarity=-0.002  Sum_probs=123.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CC---CeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NP---NFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~---~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....+.. ..   ++.++.+|++++.            
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999864333222222211 22   7899999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      +.++|+||||||......        ..+++++++++|+.|+.++++++.+    .+.+||++||.+.+....       
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  156 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ-------  156 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC-------
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC-------
Confidence            236999999999754322        1234577899999999999998754    236999999987764220       


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        ....+|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       157 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  196 (280)
T 1xkq_A          157 --PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE  196 (280)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred             --CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCc
Confidence              12357999999999888888764   58999999999875

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.80  E-value=5.6e-19  Score=156.09  Aligned_cols=161  Identities=12%  Similarity=0.024  Sum_probs=123.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            ++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999986544433333332 3467999999998873            45


Q ss_pred             CCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCCccc-cCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVY-GDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~-riV~vSS~~vy-g~~~~~~~~E~~~~  248 (290)
                      ++|++|||||......     ..+++++++++|+.|++++++++.    +.+. +||++||.+.+ +.+           
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~-----------  152 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF-----------  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS-----------
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC-----------
Confidence            7999999999653322     224577899999999999998864    3443 99999997643 211           


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+...+.+.++.++   |+.+..+-|+.+.
T Consensus       153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~  191 (254)
T 4fn4_A          153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVK  191 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCC
Confidence            12479999999888888888764   7788888887653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.80  E-value=5.8e-19  Score=156.45  Aligned_cols=162  Identities=11%  Similarity=0.018  Sum_probs=124.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEccccccc------------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~------------  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.+...+...++   ....++.++.+|++++.            
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999998644333322222   23346999999998863            


Q ss_pred             ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      +.++|+||||||.......    .+++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          .
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  154 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE----------P  154 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC----------T
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC----------C
Confidence            2479999999997543332    234567899999999999999754    22 389999998765321          1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  193 (265)
T 3lf2_A          155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVE  193 (265)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence            22589999999999998888775   7889999998764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.80  E-value=4.9e-19  Score=158.00  Aligned_cols=161  Identities=14%  Similarity=0.025  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.+
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999986433222222221 1356889999998763            246


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~------~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +|+||||||.......    .+++++++++|+.|+.++++++.+.      + .+||++||.+.+...          ..
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~  169 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----------VH  169 (277)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC----------TT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC----------CC
Confidence            9999999997543322    2345678999999999999997654      3 489999998654211          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  207 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVE  207 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCc
Confidence            3579999999999998888764   7888899998764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.80  E-value=2.6e-19  Score=157.27  Aligned_cols=159  Identities=13%  Similarity=0.015  Sum_probs=121.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+.....  ..++..+.+|++++.            +.++
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL--GDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999998643333222222  235788999998863            2479


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||......    ..+++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ....+
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~  154 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN----------AGQAN  154 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------TTCHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------CCChH
Confidence            99999999764433    2234677899999999999998753    33 499999997654211          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.++   |+++..++|+.+.
T Consensus       155 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  189 (248)
T 3op4_A          155 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIE  189 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCC
Confidence            9999999999898888764   7888999988764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=2.4e-19  Score=158.97  Aligned_cols=158  Identities=18%  Similarity=0.137  Sum_probs=121.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++ . .++.++.+|++++.            +.++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-E-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-C-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-c-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998643322222222 2 56889999998763            2468


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++.+.   +.+||++||.+.|+.+           ....|+
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~Y~  150 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-----------GLAHYA  150 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-----------HHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC-----------CcHHHH
Confidence            999999997543222    1235678999999999999998764   3499999998877311           124799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       151 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  183 (263)
T 2a4k_A          151 AGKLGVVGLARTLALELARKGVRVNVLLPGLIQ  183 (263)
T ss_dssp             HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCc
Confidence            99998888888888764   8999999998774

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.80  E-value=6.5e-19  Score=154.53  Aligned_cols=161  Identities=14%  Similarity=0.024  Sum_probs=121.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986432222222221 2357889999998763            247


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|+||||||........    ++++.++++|+.|+.++++++.+    .+.+||++||.+.+...          .....
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  154 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNV----------RNAAV  154 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCC----------TTCHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCC----------CCCcH
Confidence            99999999975433222    23567899999999999998753    23699999998765321          12357


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  189 (247)
T 2jah_A          155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTD  189 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCC
Confidence            999999988888888765   48999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.80  E-value=6.4e-19  Score=155.31  Aligned_cols=161  Identities=13%  Similarity=0.012  Sum_probs=120.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|+.....+...+.  ..++.++.+|++++.            +.
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--GDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4467899999999999999999999999999999998643333322222  357899999998763            23


Q ss_pred             CCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHc---------CCeEEEEcCCccccCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---------GARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      ++|+||||||......     ..+++++++++|+.|+.++++++.+.         +.+||++||...+...        
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  154 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR--------  154 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC--------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC--------
Confidence            7999999999754222     22345678999999999999887432         2269999998765311        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        ....+|+.+|.+.+.+++.+..+   +++.+..++|+.+.
T Consensus       155 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  194 (261)
T 3n74_A          155 --PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGE  194 (261)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence              12247999999999999988877   47888888887654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.80  E-value=6.5e-19  Score=154.00  Aligned_cols=161  Identities=12%  Similarity=0.075  Sum_probs=120.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+....++.++.+|++++.            +.++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5678999999999999999999999999999999864322222222222257899999998763            2369


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||........    +++++++++|+.|+.++++++.    +.+  .+||++||.+.|....          ...
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~  153 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP----------SLG  153 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT----------TCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC----------CCc
Confidence            9999999975432222    2356789999999998877754    334  4899999988764221          235


Q ss_pred             hhhhhHHHHHHHHHHHHH-----HhCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFIS-----QFRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~-----~~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.+..     ..+++++++||+.+.
T Consensus       154 ~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~  191 (251)
T 1zk4_A          154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK  191 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC
T ss_pred             cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCc
Confidence            899999999888888775     357889999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.80  E-value=4.8e-19  Score=157.34  Aligned_cols=161  Identities=11%  Similarity=-0.014  Sum_probs=121.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999986433333222221 2457889999998763            247


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    .++++.++++|+.|++++++++.+    .+ .+||++||.+.+...          ....
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------~~~~  151 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV----------PTAA  151 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------TTCH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC----------CCCh
Confidence            9999999997643332    234677899999999999888643    34 499999998765321          1225


Q ss_pred             hhhhhHHHHHHHHHHHHHHh-CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF-RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~-gl~~~ilR~~~lr  284 (290)
                      .|+.+|.+.+.+.+.++.++ |+.+..+.|+.+.
T Consensus       152 ~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~  185 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQESTNIRVTCVNPGVVE  185 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCc
Confidence            79999999999999888875 7777888887654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=8.1e-19  Score=153.77  Aligned_cols=156  Identities=13%  Similarity=0.096  Sum_probs=118.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+.....    .+.++.+|++++.            +.++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999998532222222111    2788899998763            2369


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++.+.    + .+||++||.+.++..           ...+
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~  147 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-----------GQAN  147 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-----------TCHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC-----------Cchh
Confidence            999999997543222    2345678999999999999987542    3 389999998855432           1247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|...+.+.+.+..++   |+++++++|+.+.
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  182 (245)
T 1uls_A          148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIE  182 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCc
Confidence            9999999888888887654   8899999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.80  E-value=2.3e-19  Score=159.76  Aligned_cols=163  Identities=10%  Similarity=-0.060  Sum_probs=123.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+.....+....+. ...++..+.+|++++.            +
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999999986433332222221 2356888999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||.......    .+++++++++|+.|++++++++.+    .+ .+||++||.+.+....          .
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  173 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP----------G  173 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----------C
Confidence            479999999997644332    234677899999999999998753    33 4899999987652111          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.+   .|+.+..++|+.+.
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  211 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFID  211 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence            257999999999999888877   47888999998764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.80  E-value=3e-19  Score=155.76  Aligned_cols=158  Identities=14%  Similarity=0.037  Sum_probs=118.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      .+|+++||||+|+||.+++++|+++|++|++++|+.....+..... + .++.++.+|++++.            +.++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-G-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-G-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            4689999999999999999999999999999998644333322222 2 36899999998763            24699


Q ss_pred             EEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       183 ~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      +||||||......    ..+++++++++|+.|+.++++++.+.    +.+||++||.+.+....          ...+|+
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~  149 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA----------NESLYC  149 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS----------SHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC----------CCcHHH
Confidence            9999999754322    22346778999999999999987542    23899999976542111          124799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  182 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIR  182 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCcc
Confidence            99999999999998864   6788888888664

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.80  E-value=8.8e-19  Score=154.50  Aligned_cols=159  Identities=17%  Similarity=0.095  Sum_probs=121.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC--chhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG--RKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +|+++||||+|+||.+++++|+++|++|++++|+...  ..+....+. ...++.++.+|++++.            +.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999986433  222222221 1357889999998763            237


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||......    ..+++++++++|+.|+.++++++.+    .+  .+||++||.+.+...          ...
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  151 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF----------PIL  151 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC----------TTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC----------CCc
Confidence            999999999754322    2234667899999999999998754    23  599999998765321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|...+.+.+.+..++   |+.+.+++|+.+.
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  188 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVG  188 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccC
Confidence            579999999999888888764   8999999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.80  E-value=5.9e-19  Score=157.30  Aligned_cols=162  Identities=18%  Similarity=0.091  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC---------Cchhhhhcc-----cCCCCeEEEEccccccc-
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT---------GRKENVMHH-----FGNPNFELIRHDVVEPL-  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~-----~~~~~v~~~~~D~~~~~-  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|...         +..+.+...     ....++.++.+|++++. 
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            367899999999999999999999999999999998421         122222111     13467899999998763 


Q ss_pred             -----------ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccC
Q 022900          178 -----------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGD  236 (290)
Q Consensus       178 -----------~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~  236 (290)
                                 +.++|+||||||.......    .+++++++++|+.|++++++++.    +.+  .+||++||.+.+..
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence                       2469999999998654332    23467789999999999999854    333  48999999876532


Q ss_pred             CCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          237 PLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       237 ~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..          ...+|+.+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       168 ~~----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  208 (277)
T 3tsc_A          168 QP----------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVN  208 (277)
T ss_dssp             CS----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred             CC----------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCc
Confidence            11          22579999999999999888775   7889999998774

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.80  E-value=6.4e-20  Score=160.16  Aligned_cols=155  Identities=12%  Similarity=-0.020  Sum_probs=116.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----c----cCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L----LEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~----~~vD~vih  186 (290)
                      ||+|+||||+||||++++++|+++|++|++++|+......            .+.+|+.+..     +    .++|+|||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            4689999999999999999999999999999986432211            0456765542     2    37999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCC-CCC-------C--------
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHP-QKE-------T--------  245 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~-~~E-------~--------  245 (290)
                      |||....   ..+++.++++|+.|+.++++++.+.    + .+||++||.++|+.....+ ..|       +        
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (255)
T 2dkn_A           69 CAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ  145 (255)
T ss_dssp             CCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccc
Confidence            9996432   4568899999999999999987653    3 5999999999986442111 111       0        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      ...+..+|+.+|.+.+.+++.+.++   +|++++++||+.+..
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~  188 (255)
T 2dkn_A          146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVET  188 (255)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCS
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccc
Confidence            0123357999999999988888776   699999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.80  E-value=1.2e-18  Score=155.08  Aligned_cols=163  Identities=15%  Similarity=0.098  Sum_probs=123.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++++.....+.+...+  ...++.++.+|++++.            +
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999775432222222211  2457899999998763            2


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +++|+||||||......    ..+++++++++|+.|+.++++++.+.   +.+||++||....-.+         .....
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~---------~~~~~  178 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP---------WPGIS  178 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC---------STTCH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC---------CCCch
Confidence            47999999999764333    22346778999999999999998764   3499999996432110         11235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.++   |+.+..++|+.+.
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  214 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTD  214 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCc
Confidence            79999999999999888775   8999999998775

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.80  E-value=6e-19  Score=156.90  Aligned_cols=162  Identities=12%  Similarity=-0.009  Sum_probs=123.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|......+.+...+  ...++.++.+|++++.            +
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999884332222222211  2457899999998863            2


Q ss_pred             cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||......    ..+++++++++|+.|++++++++.    +.+ .+||++||.+.+....          .
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  174 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP----------G  174 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT----------T
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC----------C
Confidence            47999999999764433    223467789999999999999864    333 4999999987542111          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.++.+   +|+++..++|+.+.
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  212 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIA  212 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBT
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCc
Confidence            357999999999988888876   48999999998775

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.80  E-value=5.7e-19  Score=153.03  Aligned_cols=157  Identities=12%  Similarity=-0.070  Sum_probs=115.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      .+|+|+||||+|+||.+++++|+++|++|++++|+.....+...++   .++.++.+|++++.            +.++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---EGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---hhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4578999999999999999999999999999998543222222111   26888999998763            24799


Q ss_pred             EEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       183 ~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +||||||......    ..++++.++++|+.|+.++++++    ++.+ .+||++||.+.|...          ....+|
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y  150 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF----------KGGAAY  150 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC----------TTCHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC----------CCCchh
Confidence            9999999754322    12345678999999998777665    4444 499999998776421          123589


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +.+|.+.+.+++.+..+   .|++++++||+.+.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  184 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVD  184 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence            99999988888888765   48899999998764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.79  E-value=3.5e-19  Score=162.36  Aligned_cols=161  Identities=16%  Similarity=0.040  Sum_probs=121.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+||||.+++++|+++|++|++++|+.....+....+.   ...++.++.+|++++.            +
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            567899999999999999999999999999999986543333222221   1237999999998863            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEcCCccccCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLLTSTSEVYGDPLQHPQK  243 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~-----------~~riV~vSS~~vyg~~~~~~~~  243 (290)
                      .++|+||||||.......    .++++.++++|+.|+.++++++.+.           +.+||++||.+.+....     
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~-----  160 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG-----  160 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS-----
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC-----
Confidence            468999999997543332    2345678999999999999987432           34899999987764221     


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                           ...+|+.+|.+.+.+.+.++.+   .|++++++.|+.+.
T Consensus       161 -----~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~  199 (319)
T 3ioy_A          161 -----SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVK  199 (319)
T ss_dssp             -----SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEc
Confidence                 1247999999888888777655   48999999998764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.79  E-value=8.5e-19  Score=154.42  Aligned_cols=161  Identities=7%  Similarity=-0.025  Sum_probs=120.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccccc-----------cCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL-----------LEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~-----------~~v  181 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++..           .++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            578899999999999999999999999999999997554444333322 24578999999987731           378


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++.    +.+ .+||++||.+.+...          ....+
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  154 (252)
T 3h7a_A           85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG----------SGFAA  154 (252)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC----------TTCHH
T ss_pred             eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC----------CCCcc
Confidence            999999997654332    23457789999999999999863    344 499999998754211          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCe-eEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSR-KACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~-~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.++   |+.+ .++.|+.+.
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~  190 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVD  190 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccC
Confidence            9999999999998888764   6777 677777653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.79  E-value=1.3e-18  Score=154.13  Aligned_cols=159  Identities=13%  Similarity=0.060  Sum_probs=120.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+++|+|+||||+|+||.++++.|+++|++|++++|+.....+.+..    ..+.++.+|++++.            +.
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ----AGAVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH----HTCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----cCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            335678999999999999999999999999999999975433333322    23788999998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|+||||||.......+   ++++.++++|+.|+.++++++.+    .+ .+||++||.+.+....          ...
T Consensus        99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~  168 (260)
T 3gem_A           99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS----------KHI  168 (260)
T ss_dssp             CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS----------SCH
T ss_pred             CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC----------CcH
Confidence            799999999975443322   23456899999999999998753    33 4999999987653211          235


Q ss_pred             hhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.+++  +.+..++|+.+.
T Consensus       169 ~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~  203 (260)
T 3gem_A          169 AYCATKAGLESLTLSFAARFAPLVKVNGIAPALLM  203 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccc
Confidence            899999999999999998874  777888887664

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.79  E-value=4.1e-19  Score=158.19  Aligned_cols=160  Identities=14%  Similarity=0.011  Sum_probs=122.8

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+  |+||.++++.|+++|++|++++|+.. ..+.+.++.. ..++.++.+|++++.            +
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999999754 2222222211 124788999998763            2


Q ss_pred             cCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      .++|+||||||....    ..    ..++++.++++|+.|+.++++++.+.   +.+||++||.+.+...          
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------  152 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------  152 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC----------
Confidence            478999999997543    11    22345778999999999999999775   3489999997654211          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+.+.+..++   |+.++.++|+.+.
T Consensus       153 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  192 (275)
T 2pd4_A          153 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIR  192 (275)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence            123579999999999998888775   8999999999875

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=2.7e-19  Score=159.13  Aligned_cols=163  Identities=9%  Similarity=-0.035  Sum_probs=121.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..+++|+|+||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            34678999999999999999999999999999999986432222222211 2357899999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||........    ++++.++++|+.|+.++++++.    +.+ .+||++||.+.|...          ..
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~  176 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV----------PF  176 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH----------HH
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC----------CC
Confidence            3799999999975433221    2356789999999999888764    344 499999998776421          01


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh------CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF------RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~------gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..++      |+++++++|+.+.
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~  217 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN  217 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCccc
Confidence            2479999999999998888765      7899999998764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.79  E-value=6.3e-19  Score=154.10  Aligned_cols=161  Identities=10%  Similarity=-0.054  Sum_probs=122.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....+. ...++.++.+|++++.            +.+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986433332222221 2457999999998763            236


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||......    ..++++.++++|+.|+.++++++.+    .+ .+||++||...+....          ...
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  152 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP----------GQT  152 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC----------CcH
Confidence            999999999764432    2234567899999999999998643    33 3999999987653211          235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.+   .|+++..++|+.+.
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  188 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIA  188 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEe
Confidence            7999999999999888876   47888999998764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.79  E-value=2.8e-19  Score=158.03  Aligned_cols=161  Identities=11%  Similarity=0.005  Sum_probs=122.8

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+  |+||.++++.|+++|++|++++|+.. ..+.+.++.. ...+.++.+|++++.            +
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999998642 2222222211 124788999998763            2


Q ss_pred             cCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      .++|+||||||....    ..    ..++++.++++|+.|+.++++++.+.   +.+||++||.+.+...          
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------  154 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV----------  154 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC----------
Confidence            379999999997542    11    22346778999999999999999765   2489999997665311          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                      ....+|+.+|.+.+.+++.++.++   |+++++++|+.+.-
T Consensus       155 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  195 (261)
T 2wyu_A          155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT  195 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcC
Confidence            122579999999999999888775   89999999998753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.79  E-value=5.5e-19  Score=157.56  Aligned_cols=159  Identities=14%  Similarity=0.063  Sum_probs=120.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++  ..++.++.+|++++.            ++++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--GDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--TSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998643333333222  257889999998763            2479


Q ss_pred             CEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       182 D~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~---~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      |+||||||...+. .    ..+++++++++|+.|++++++++.+    .+   .+||++||.+.+...          ..
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~  173 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR----------PY  173 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC----------TT
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC----------CC
Confidence            9999999975432 1    2234577899999999999988643    32   389999998765321          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.++.+   .|+.+..++|+.+.
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  211 (272)
T 4dyv_A          174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNAD  211 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECccc
Confidence            357999999999999888876   47888889888764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.79  E-value=3.8e-19  Score=158.43  Aligned_cols=162  Identities=14%  Similarity=0.090  Sum_probs=124.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++. ...++.++.+|++++.            +.
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            3678999999999999999999999999999999886443333333222 2457899999998763            24


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||......    ..+++++++++|+.|++++++++.+    .+ .+||++||.+.+...          ...
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~----------~~~  172 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR----------ATV  172 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------TTC
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC----------CCc
Confidence            7999999999764333    2234677899999999999887643    34 399999997654211          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.+   +|+.+..++|+.+.
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  209 (271)
T 4ibo_A          173 APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYML  209 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEe
Confidence            58999999999999988876   57889999998764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.79  E-value=4.7e-19  Score=158.12  Aligned_cols=163  Identities=9%  Similarity=0.002  Sum_probs=125.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|+.....+...++.  ...++.++.+|++++.            
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999986443333332221  2457999999998873            


Q ss_pred             ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V-GARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      +.++|+||||||......    ..+++++++++|+.|++++++++.+    . +.+||++||.+.+....          
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  172 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA----------  172 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT----------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----------
Confidence            247999999999654322    2234677899999999999998743    2 24999999987653111          


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.++.++   |+++..++|+.+.
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  211 (277)
T 4fc7_A          173 LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPIS  211 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEe
Confidence            22579999999999998888775   7899999998775

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.79  E-value=9.8e-19  Score=153.87  Aligned_cols=162  Identities=14%  Similarity=0.046  Sum_probs=119.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccc--cccc----------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDV--VEPL----------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~--~~~~----------  177 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+.....+...++.  ...++.++.+|+  +++.          
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999986433333222221  234678889999  5552          


Q ss_pred             --ccCCCEEEEcccCCCCC-C-CC---CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASPV-H-YK---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~~-~-~~---~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                        +.++|+||||||..... . .+   +++++++++|+.|++++++++.    +.+ .+||++||...+...        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  159 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR--------  159 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--------
Confidence              24799999999974321 1 12   2356789999999999999874    344 499999998765311        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQFR--PSRKACRFFIL  283 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~l  283 (290)
                        ....+|+.+|.+.+.+.+.++.+++  +.+..+.|+.+
T Consensus       160 --~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v  197 (252)
T 3f1l_A          160 --ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGT  197 (252)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSB
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcc
Confidence              1235799999999999999998875  55556666544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.79  E-value=6.3e-20  Score=169.63  Aligned_cols=134  Identities=25%  Similarity=0.299  Sum_probs=112.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~  195 (290)
                      |+|+||||+||||++|+++|+++|+ +|++++|.  ...                 +..+..+.++|+|||+||...+  
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--~d~-----------------~~l~~~~~~~d~Vih~a~~~~~--   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--TKE-----------------EELESALLKADFIVHLAGVNRP--   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--CCH-----------------HHHHHHHHHCSEEEECCCSBCT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--CCH-----------------HHHHHHhccCCEEEECCcCCCC--
Confidence            5899999999999999999999999 99999873  111                 1223334469999999996543  


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhCC
Q 022900          196 YKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRP  273 (290)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~gl  273 (290)
                        .++...+++|+.++.+++++|++.+  ++||++||.++|+              .++|+.+|...|.+++.+.+++++
T Consensus        60 --~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK~~~E~~~~~~~~~~g~  123 (369)
T 3st7_A           60 --EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESKLQGEQLLREYAEEYGN  123 (369)
T ss_dssp             --TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHHHHHHHHHHHHHHHhCC
Confidence              3556677899999999999999988  3899999999997              479999999999999999999999


Q ss_pred             CeeEEEeeeeeccc
Q 022900          274 SRKACRFFILLYRN  287 (290)
Q Consensus       274 ~~~ilR~~~lr~~~  287 (290)
                      +++++|++++.+..
T Consensus       124 ~~~i~R~~~v~G~~  137 (369)
T 3st7_A          124 TVYIYRWPNLFGKW  137 (369)
T ss_dssp             CEEEEEECEEECTT
T ss_pred             CEEEEECCceeCCC
Confidence            99999999987653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=7.8e-19  Score=158.41  Aligned_cols=162  Identities=12%  Similarity=0.003  Sum_probs=122.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCC---CeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNP---NFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~---~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...   ++.++.+|++++.            
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999999986433222222221 122   6889999998763            


Q ss_pred             ccCCCEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +.++|+||||||......      ..+++++++++|+.|+.++++++.+    .+.+||++||.+.+....         
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~---------  174 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH---------  174 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC---------
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCC---------
Confidence            247999999999754322      1234567899999999999998754    335999999987764220         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .....|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~  214 (297)
T 1xhl_A          175 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA  214 (297)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence            12357999999998888888764   58999999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.79  E-value=5.5e-19  Score=158.03  Aligned_cols=161  Identities=12%  Similarity=-0.009  Sum_probs=116.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh-hhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-VMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|......+. ..++. ...++.++.+|++++.            +.
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999998643222222 12221 2467999999998874            23


Q ss_pred             CCCEEEEcccCCC--CCC----CCCChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCCccccCCCCCCCCCC
Q 022900          180 EVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       180 ~vD~vih~Ag~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--------~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      ++|+||||||...  ...    ..+++++++++|+.|+.++++++.+.        +.+||++||.+.+...        
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--------  178 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS--------  178 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--------
Confidence            7999999999732  111    22346778999999999999986432        2389999998765211        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        ....+|+.+|.+.+.+.+.++.+   +|+.+..++|+.+.
T Consensus       179 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  218 (280)
T 4da9_A          179 --PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIR  218 (280)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCc
Confidence              12257999999999999988877   57888899988764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.79  E-value=4.9e-19  Score=156.28  Aligned_cols=161  Identities=11%  Similarity=0.031  Sum_probs=121.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccccc-----c------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPLL-----L------  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~-----~------  179 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+...++.   ...++.++.+|++++..     .      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            567899999999999999999999999999999986432222222221   12378899999987631     1      


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||......    ..+++++++++|+.|+.++++++.    +.+ .+||++||...|...          ...
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  154 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW----------QDL  154 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTB
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC----------CCC
Confidence            3999999999754322    123467789999999988888764    344 499999998876421          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  191 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLIL  191 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcc
Confidence            579999999999888888765   8999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.79  E-value=7.2e-19  Score=153.22  Aligned_cols=160  Identities=8%  Similarity=-0.038  Sum_probs=121.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc----------
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL----------  177 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~----------  177 (290)
                      +|+|+||||+|+||.+++++|+++|+       +|++++|+.....+...++. ...++.++.+|++++.          
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999       99999985432222222221 2356889999998763          


Q ss_pred             --ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                        +.++|+||||||......    ..++++.++++|+.|+.++++++.+    .+ .+||++||.+.|...         
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  152 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------  152 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC---------
Confidence              236999999999754322    2234677899999999999998743    34 499999998877421         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                       ....+|+.+|.+.+.+++.+..+   +|++++++||+.+..
T Consensus       153 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  193 (244)
T 2bd0_A          153 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYT  193 (244)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCS
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccc
Confidence             12358999999999888877764   588999999998753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.79  E-value=1.2e-18  Score=153.23  Aligned_cols=163  Identities=15%  Similarity=0.031  Sum_probs=120.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhccc-CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHF-GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------  177 (290)
                      ...++|+|+||||+|+||.+++++|+++|++|+++++.. ....+...... ...++.++.+|+++..            
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            446789999999999999999999999999999988443 33332222221 2457899999998763            


Q ss_pred             ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      +.++|+||||||........    +++++++++|+.|+.++++++.    +.+ .+||++||.+.+...          .
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  158 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------F  158 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC----------S
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC----------C
Confidence            24799999999976443322    3456789999999999988763    344 389999998765321          1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.+..+   .|+.+..++|+.+.
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  197 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIG  197 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECccc
Confidence            2358999999999999888876   47888888888764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.79  E-value=6.2e-19  Score=159.32  Aligned_cols=161  Identities=14%  Similarity=0.059  Sum_probs=123.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++. ...++.++.+|+++..            +.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999986543333322222 2457899999998863            237


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.......    .+++++++++|+.|+.++++++.    +.+  .+||++||.+.+...          ...
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  178 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN----------AGL  178 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC----------TTB
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------CCc
Confidence            9999999997643322    23456789999999999999864    333  489999998765321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++   |+.+..++|+.+.
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  215 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVE  215 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccc
Confidence            579999999999888888765   7888888887664

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.79  E-value=4.4e-19  Score=154.64  Aligned_cols=160  Identities=13%  Similarity=0.041  Sum_probs=120.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+....+.  ...++.++.+|++++.            +.
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999985432222111111  1357889999998763            23


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEV-YGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||......    ...++++++++|+.|+.++++++    ++.+ .+||++||.+. ++.+           .
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~  153 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV-----------G  153 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC-----------C
Confidence            7999999999754322    12345678999999998888765    3444 49999999754 4422           2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+.+++   ++++++++|+.+.
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~  191 (248)
T 2pnf_A          154 QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIE  191 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceec
Confidence            3579999999999888888764   7889999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.79  E-value=1.4e-18  Score=151.46  Aligned_cols=154  Identities=12%  Similarity=0.023  Sum_probs=118.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----------ccCCCEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------~~~vD~v  184 (290)
                      +|+++||||+|+||.+++++|+++|++|++++|+...   ...++    .+.++.+|++++.           +.++|+|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----GAVPLPTDLEKDDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----TCEEEECCTTTSCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----CcEEEecCCchHHHHHHHHHHHHHcCCCCEE
Confidence            5799999999999999999999999999999986432   11112    2778889998732           2469999


Q ss_pred             EEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          185 YHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       185 ih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      |||||.......    .+++++++++|+.|+.++++++.    +.+ .+||++||.+.|....        .....+|+.
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------~~~~~~Y~~  146 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------PVPIPAYTT  146 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------TSCCHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--------CCCCccHHH
Confidence            999997543222    23467789999999999999874    334 4999999988775321        013358999


Q ss_pred             hHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  178 (239)
T 2ekp_A          147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVE  178 (239)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCcc
Confidence            9999999998888775   8999999998774

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.79  E-value=6.5e-19  Score=156.50  Aligned_cols=162  Identities=15%  Similarity=0.043  Sum_probs=120.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++|+|+||||+|+||.+++++|+++|++|+++++......+.+...+  ...++.++.+|++++.            +.
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999887443222222221111  2457899999998763            24


Q ss_pred             CCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEcCCccccCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--------~~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      ++|+||||||......     ..+++++++++|+.|+.++++++.+.        +.+||++||.+.+....        
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  175 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--------  175 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------
Confidence            7999999999754312     22345778999999999999987543        23899999987643211        


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ....+|+.+|.+.+.+++.+..++   |+++..++|+.+.
T Consensus       176 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  215 (272)
T 4e3z_A          176 -TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIE  215 (272)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCc
Confidence             012469999999999999888876   8999999998775

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.79  E-value=1.1e-18  Score=151.36  Aligned_cols=160  Identities=13%  Similarity=-0.035  Sum_probs=119.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc--cCCCCeEEEEccccccc------------ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++  ....++.++.+|++++.            +.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999998644333322222  12467999999998763            237


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|+||||||.......    .++++.++++|+.|+.++++++.+    .+.++|++||...+....          ...+
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------~~~~  150 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP----------YGGG  150 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT----------TCHH
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC----------Ccch
Confidence            9999999997654332    234567899999999999999754    345788877765432111          1247


Q ss_pred             hhhhHHHHHHHHHHHHHH-hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ-FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~-~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..+ .++.+..++|+.+.
T Consensus       151 Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~  183 (235)
T 3l77_A          151 YVSTKWAARALVRTFQIENPDVRFFELRPGAVD  183 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccc
Confidence            999999998888887544 48999999998774

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.79  E-value=9.1e-19  Score=154.23  Aligned_cols=158  Identities=17%  Similarity=0.082  Sum_probs=119.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      +|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999986432222222221 2356889999998763            23799


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccc-cCCCCCCCCCCCCCCCC
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVY-GDPLQHPQKETYWGNVN  251 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vy-g~~~~~~~~E~~~~~~~  251 (290)
                      +||||||.......    .+++++++++|+.|+.++++++.+    .+  .+||++||.+.+ +.+           ...
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~  150 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP-----------ELA  150 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------TBH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC-----------Cch
Confidence            99999997543221    234567899999999999888643    33  499999998654 321           124


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       151 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  186 (256)
T 1geg_A          151 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVK  186 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCc
Confidence            7999999999888888875   48999999998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.79  E-value=8.2e-19  Score=153.65  Aligned_cols=163  Identities=10%  Similarity=-0.015  Sum_probs=122.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC-CCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF-FTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+|+||||+||||.+++++|+++|++|++++|+ .....+...++. ...++.++.+|++++.            +.
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999999997 433332222221 2357899999998763            13


Q ss_pred             CCCEEEEcccC-CCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC------CeEEEEcCCccccCCCCCCCCC
Q 022900          180 EVDQIYHLACP-ASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG------ARFLLTSTSEVYGDPLQHPQKE  244 (290)
Q Consensus       180 ~vD~vih~Ag~-~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~------~riV~vSS~~vyg~~~~~~~~E  244 (290)
                      ++|+||||||. ......    .++++.++++|+.|+.++++++.+    .+      .+||++||...+...       
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  157 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-------  157 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-------
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-------
Confidence            79999999996 322211    123567899999999999987632    22      589999998766411       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                        ..+..+|+.+|.+.+.+++.+..++   |++++++||+.+..
T Consensus       158 --~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t  199 (258)
T 3afn_B          158 --GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDT  199 (258)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccc
Confidence              0133589999999999999888765   89999999998753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.79  E-value=1e-18  Score=153.59  Aligned_cols=156  Identities=15%  Similarity=0.036  Sum_probs=119.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~v  184 (290)
                      |+++||||+|+||.++++.|+++|++|++++|+.....+...++  ..++.++.+|++++.            +.++|+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            57999999999999999999999999999998643222222222  246889999998763            2469999


Q ss_pred             EEcccCCC-CCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |||||... ...    ..++++.++++|+.|+.++++++.    +.+ .+||++||.+.+...          ....+|+
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~Y~  148 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY----------AGGNVYG  148 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------TTCHHHH
T ss_pred             EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC----------CCCchHH
Confidence            99999752 111    223467789999999999999875    333 599999998765321          1235899


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|...+.+.+.++.++   |+.+..++|+.+.
T Consensus       149 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  181 (248)
T 3asu_A          149 ATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVG  181 (248)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeccccc
Confidence            99999999999888764   8999999998876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.79  E-value=1.1e-18  Score=156.04  Aligned_cols=161  Identities=11%  Similarity=-0.040  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+  |+||.++++.|+++|++|++++|+.. ..+.+.++.. ...+.++.+|++++.            +
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999998652 2222222211 123678899998763            2


Q ss_pred             cCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      .++|+||||||....    ..    ..++++.++++|+.|+.++++++.+.    +.+||++||.+.+...         
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------  168 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---------  168 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC---------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC---------
Confidence            479999999997542    11    22345678999999999999998654    2499999997765311         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeeec
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILLY  285 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr~  285 (290)
                       ....+|+.+|.+.+.+++.+..++   |+.+++++|+.+.-
T Consensus       169 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  209 (285)
T 2p91_A          169 -PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKT  209 (285)
T ss_dssp             -TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccC
Confidence             123579999999999998888764   89999999998753

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.79  E-value=6.5e-19  Score=155.92  Aligned_cols=160  Identities=15%  Similarity=-0.017  Sum_probs=122.3

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+  |+||.++++.|+++|++|++++|+. ...+.+.++.. .....++.+|++++.            +
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            467899999999  9999999999999999999999875 33333322211 123478889998763            2


Q ss_pred             cCCCEEEEcccCCCC----C-----CCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASP----V-----HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~----~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      .++|+||||||....    .     ...++++.++++|+.|+.++++++.+..   .+||++||.+.+...         
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------  156 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---------  156 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC---------
Confidence            368999999997542    1     2223467789999999999999997753   489999997765311         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ....+|+.+|.+.+.+++.+..++   |+++++++|+.+.
T Consensus       157 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  196 (265)
T 1qsg_A          157 -PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR  196 (265)
T ss_dssp             -TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCC
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCc
Confidence             123579999999999999988775   8899999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.79  E-value=1.2e-18  Score=156.26  Aligned_cols=163  Identities=12%  Similarity=-0.005  Sum_probs=121.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCchhhhhcc--cCCCCeEEEEccccc----cc-------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHH--FGNPNFELIRHDVVE----PL-------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~--~~~~~v~~~~~D~~~----~~-------  177 (290)
                      ..+++|+++||||+|+||.++++.|+++|++|++++|+. ....+....+  ....++.++.+|+++    +.       
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            446789999999999999999999999999999999865 3222222222  124578999999998    42       


Q ss_pred             -----ccCCCEEEEcccCCCCCCC-----C---------CChHHHHHHHHHHHHHHHHHHHHc-----------CCeEEE
Q 022900          178 -----LLEVDQIYHLACPASPVHY-----K---------FNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLL  227 (290)
Q Consensus       178 -----~~~vD~vih~Ag~~~~~~~-----~---------~~~~~~~~~Nv~gt~~ll~a~~~~-----------~~riV~  227 (290)
                           +.++|+||||||.......     .         ++++.++++|+.|++++++++.+.           +.+||+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence                 2479999999997543322     1         234568999999999999987542           238999


Q ss_pred             EcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          228 TSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       228 vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +||.+.+...          ....+|+.+|.+.+.+.+.++.++   |+.+.+++|+.+.
T Consensus       179 isS~~~~~~~----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  228 (288)
T 2x9g_A          179 LCDAMVDQPC----------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSL  228 (288)
T ss_dssp             ECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCS
T ss_pred             EecccccCCC----------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEecccc
Confidence            9998776421          123579999999988888888764   8899999998764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.79  E-value=3.3e-19  Score=157.26  Aligned_cols=171  Identities=16%  Similarity=0.030  Sum_probs=124.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++|+|+||||+||||.++++.|++ +|++|++++|+.....+....+. ...++.++.+|+++..            +.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999 99999999986433222222221 1357889999998763            23


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccC-CC----------CCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGD-PL----------QHP  241 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~-~~----------~~~  241 (290)
                      ++|+||||||........    .+++.++++|+.|+.++++++.+..   .+||++||...|.. ..          ..+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  161 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  161 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence            799999999975433222    3456789999999999999998763   38999999876521 11          011


Q ss_pred             CCCCC--------------------CCCCChhhhhHHHHHHHHHHHHHH-------hCCCeeEEEeeeee
Q 022900          242 QKETY--------------------WGNVNPIGTYFFSFSLIFLVFISQ-------FRPSRKACRFFILL  284 (290)
Q Consensus       242 ~~E~~--------------------~~~~~py~~~k~~~e~~~~~~~~~-------~gl~~~ilR~~~lr  284 (290)
                      +.|+.                    ..+..+|+.+|.+.+.+++.+..+       .++.++.++|+.+.
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~  231 (276)
T 1wma_A          162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  231 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc
Confidence            11111                    113378999999998888888766       48999999998775

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.79  E-value=7.4e-19  Score=157.93  Aligned_cols=161  Identities=9%  Similarity=-0.003  Sum_probs=123.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~----------  177 (290)
                      +++|+++||||+|+||.+++++|+++|+   +|++++|+.+...+....+.   ...++.++.+|++++.          
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999998   99999986433333222221   2457899999998773          


Q ss_pred             --ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                        ++++|+||||||......     ..+++++++++|+.|++++++++.    +.+ .+||++||.+.+...        
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~--------  182 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY--------  182 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC--------
Confidence              246999999999754221     223467789999999999999873    333 599999998765311        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        ....+|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+.
T Consensus       183 --~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  222 (287)
T 3rku_A          183 --PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVE  222 (287)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEE
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCc
Confidence              12357999999999999999887   58899999998774

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.79  E-value=1.3e-18  Score=156.92  Aligned_cols=162  Identities=13%  Similarity=-0.027  Sum_probs=123.3

Q ss_pred             CCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-----------
Q 022900          112 LKRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-----------  177 (290)
                      ..+++|+++||||+|  +||.++++.|+++|++|++++|+.. ..+.+.... ....+.++.+|++++.           
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET-FKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            446789999999997  9999999999999999999998642 222222221 1234688999998873           


Q ss_pred             -ccCCCEEEEcccCCCC----C----CCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASP----V----HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~----~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                       +.++|+||||||....    .    ...++++.++++|+.|+.++++++.+..   .+||++||.+.+...        
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~--------  176 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV--------  176 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC--------
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC--------
Confidence             2479999999997642    1    1223467789999999999999987643   389999998765321        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                        ....+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       177 --~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~  216 (296)
T 3k31_A          177 --PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVR  216 (296)
T ss_dssp             --TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCC
T ss_pred             --CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCc
Confidence              123589999999999998888765   7889999998765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.78  E-value=1.1e-18  Score=155.70  Aligned_cols=160  Identities=11%  Similarity=-0.060  Sum_probs=119.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ++ |+++||||+|+||.+++++|+++|++|++++|+.....+...++....++.++.+|++++.            +.++
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            44 8999999999999999999999999999999864332222222212247889999998763            2468


Q ss_pred             CEEEEcccCCCC-CC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-C-eEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       182 D~vih~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~-riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      |+||||||.... ..    ..++++.++++|+.|+.++++++.    +.+ . +||++||.+.+...          ...
T Consensus        99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~----------~~~  168 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY----------PGS  168 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC----------TTC
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC----------CCC
Confidence            999999997532 11    123467789999999999888764    333 5 99999998765321          122


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~  205 (272)
T 2nwq_A          169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCE  205 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC
T ss_pred             chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCc
Confidence            57999999999999888865   47899999998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=1.3e-18  Score=154.82  Aligned_cols=157  Identities=17%  Similarity=0.154  Sum_probs=120.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+...++   .++.++.+|++++.            +.++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57889999999999999999999999999999998543222222211   24788999998763            2379


Q ss_pred             CEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||..... .    ..+++++++++|+.|+.++++++.+    .+.+||++||... ++.+           ...
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~  152 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----------QAV  152 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------TCH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----------CCc
Confidence            9999999975321 1    1233577899999999999998753    3469999999754 4422           125


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|...+.+.+.+..+   +|+++.+++|+.+.
T Consensus       153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~  188 (270)
T 1yde_A          153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIW  188 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccc
Confidence            7999999999988888865   58999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.78  E-value=3e-18  Score=150.17  Aligned_cols=155  Identities=14%  Similarity=0.126  Sum_probs=121.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      ++||+++||||+++||+++++.|+++|++|++++|+.+...+     ....++..+.+|++++.        ++++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-----PRHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-----CCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-----hhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            589999999999999999999999999999999986543322     13457889999998873        56799999


Q ss_pred             EcccCCCCCC--CCCChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccc-cCCCCCCCCCCCCCCCChhhhhHH
Q 022900          186 HLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVY-GDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       186 h~Ag~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vy-g~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      ||||...+..  ..++|++++++|+.|++.+++++.    +.+.+||++||.+.. |.+           ...+|+.+|.
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~-----------~~~~Y~asKa  152 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA-----------DRPAYSASKG  152 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS-----------SCHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC-----------CCHHHHHHHH
Confidence            9999764432  224578899999999999998864    334599999998653 211           1247999999


Q ss_pred             HHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          259 SFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       259 ~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ....+.+.++.++   |+++..+-|+.+.
T Consensus       153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~  181 (242)
T 4b79_A          153 AIVQLTRSLACEYAAERIRVNAIAPGWID  181 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCCCC
Confidence            9988888888764   7778888877653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.78  E-value=9.3e-19  Score=154.78  Aligned_cols=162  Identities=20%  Similarity=0.094  Sum_probs=123.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++++|+++||||+++||.++++.|+++|++|++.+|+.+...+...++. ...++..+.+|++++.            ++
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4789999999999999999999999999999999986544444333332 3467899999998873            45


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----H-cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----R-VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~-~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||.......    .+++++++++|+.|++++++++.    + .+ .+||++||.+.+....          .
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~----------~  155 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP----------T  155 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT----------T
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC----------C
Confidence            79999999997654443    24567899999999999988753    2 23 3999999987542111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+...+.+.++.+   +|+.+..+-|+.+.
T Consensus       156 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~  193 (255)
T 4g81_D          156 VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYIL  193 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            247999999988888888866   47778888777653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=1.2e-18  Score=155.26  Aligned_cols=163  Identities=12%  Similarity=0.011  Sum_probs=118.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+.....+....+.   ...++.++.+|++++.            +
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999986432222221111   1246888999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHH----HHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTL----NMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~----~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      .++|+||||||.......    ..+++.++++|+.|+.    +++..+++.+   .+||++||.+.++..   +.     
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---~~-----  181 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---PL-----  181 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---SC-----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---CC-----
Confidence            379999999997543332    2345678999999954    4555566665   599999998876421   10     


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH-----hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ-----FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~-----~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.+..+     .++++++++|+.+.
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~  223 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVE  223 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCccc
Confidence            12247999999988888877765     36889999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.78  E-value=8.4e-19  Score=155.00  Aligned_cols=162  Identities=13%  Similarity=-0.064  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-----------
Q 022900          112 LKRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-----------  177 (290)
                      ...++|+|+||||+  |+||.+++++|+++|++|++++|+. +..+.+.+.. ...++.++.+|++++.           
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            45788999999999  9999999999999999999999863 2233333221 2245888999998763           


Q ss_pred             -ccCCCEEEEcccCCCC----C-----CCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASP----V-----HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKE  244 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~----~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E  244 (290)
                       +.++|+||||||....    .     ...+++..++++|+.|+.++++++.+..   .+||++||.+.+...       
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------  161 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-------  161 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC-------
Confidence             2479999999997643    1     1223456789999999999999997653   389999998765321       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ....+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       162 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  201 (271)
T 3ek2_A          162 ---PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIK  201 (271)
T ss_dssp             ---TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-
T ss_pred             ---CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence               123589999999999988888764   8999999998774

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.78  E-value=1.2e-18  Score=155.95  Aligned_cols=161  Identities=11%  Similarity=-0.038  Sum_probs=121.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+.....+....+. ...++.++.+|++++.            +.+
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999998875332222222221 1357889999998763            246


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    .++++.++++|+.|+.++++++.    +.+ .+||++||.+.+....          ...
T Consensus       122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~  191 (285)
T 2c07_A          122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV----------GQA  191 (285)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------CCc
Confidence            9999999997543222    23456789999999999888875    344 4999999986543111          235


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.+..++   |+++++++|+.+.
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  227 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFIS  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEe
Confidence            79999999999898888764   8999999998774

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.78  E-value=1.8e-18  Score=153.73  Aligned_cols=160  Identities=11%  Similarity=0.009  Sum_probs=117.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.....+.....  ..++.++.+|++++.            +.+
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--GKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999998643333322222  357899999998873            247


Q ss_pred             CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|+||||||.......    .+++++++++|+.|+.++++++.    +.+ .+||++||.+.+...          ....
T Consensus       102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~~~~  171 (266)
T 3grp_A          102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN----------PGQT  171 (266)
T ss_dssp             CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------CHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC----------CCch
Confidence            9999999997643332    23467789999999888888763    344 499999997654211          1225


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.++   |+++..++|+.+.
T Consensus       172 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~  207 (266)
T 3grp_A          172 NYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIK  207 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCC
Confidence            79999999998888888764   7888999998764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.78  E-value=9.7e-19  Score=154.65  Aligned_cols=161  Identities=16%  Similarity=0.096  Sum_probs=120.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.            +.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999986432222222221 1346889999998763            247


Q ss_pred             CCEEEEcccCC-CCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPA-SPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~-~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||.. ....    ..+++++++++|+.|+.++++++.+    .+ .+||++||.+.+....          ..
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  154 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------NM  154 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------TB
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC----------CC
Confidence            99999999975 2222    2234577899999999999998754    23 4999999987653211          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  191 (262)
T 1zem_A          155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMG  191 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcC
Confidence            47999999988888888765   48899999998663

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.78  E-value=1.2e-18  Score=154.53  Aligned_cols=162  Identities=13%  Similarity=0.078  Sum_probs=122.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc--------ccCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL--------LLEV  181 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~--------~~~v  181 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+...++.   ....+..+.+|++++.        +.++
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            3678999999999999999999999999999999986443333322221   2456888999998763        3579


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||...+....    +++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ....+
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  156 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS----------QEMAH  156 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC----------TTCHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC----------CcchH
Confidence            9999999976543322    34566899999999998887643    44 399999998776321          12358


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  191 (267)
T 3t4x_A          157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTL  191 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeec
Confidence            9999999999999998875   5677778877653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.78  E-value=3.2e-18  Score=150.90  Aligned_cols=153  Identities=14%  Similarity=0.079  Sum_probs=117.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ..+++|+|+||||+|+||++++++|+++|++|++++|+.+..          ..+.++.+|++++.            +.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------EGFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999999854322          12778899998763            24


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||......    ..+++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          ...
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~  156 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS----------AGQ  156 (253)
T ss_dssp             SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH----------HHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC----------CCc
Confidence            6899999999754322    3456788999999999999997643    34 499999998654211          012


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.+..++   |+++++++|+.+.
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (253)
T 2nm0_A          157 ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVD  193 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence            479999999998888888764   6788899988664

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.78  E-value=9.4e-19  Score=152.21  Aligned_cols=151  Identities=17%  Similarity=0.087  Sum_probs=117.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------c--cC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L--LE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~--~~  180 (290)
                      ++|+|+||||+|+||.+++++|+++|++|++++|+.....         ....++.+|++++.            +  .+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999999999999999998653321         13566778987652            1  47


Q ss_pred             CCEEEEcccCCCCCCC-----CCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVHY-----KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|+||||||.......     .++++.++++|+.|+.++++++.+..   .+||++||.+.+...          ....+
T Consensus        73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  142 (236)
T 1ooe_A           73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT----------PSMIG  142 (236)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------TTBHH
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC----------CCcHH
Confidence            9999999997543322     23456789999999999999987642   489999998776311          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHhC-----CCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQFR-----PSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~g-----l~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.+..+++     +++++++|+.+.
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~  179 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD  179 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCccc
Confidence            99999999999999987654     889999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.78  E-value=1e-18  Score=156.37  Aligned_cols=161  Identities=15%  Similarity=0.027  Sum_probs=118.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++.  ....+.++.+|++++.            +.
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999986433332222221  2234689999998773            24


Q ss_pred             CCCEEEEcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHH----HcC---CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAK----RVG---ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~---~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      ++|+||||||..... .    ..+++++++++|+.|++++++++.    +.+   .+||++||.+.+...          
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------  180 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR----------  180 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC----------
Confidence            799999999975332 1    223466799999999999988864    332   489999998764211          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.++.+   +|+.+..+.|+.+.
T Consensus       181 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  220 (281)
T 4dry_A          181 PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAA  220 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBC
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCc
Confidence            12357999999999988888876   57888888888664

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.78  E-value=1.2e-18  Score=152.57  Aligned_cols=160  Identities=17%  Similarity=0.037  Sum_probs=119.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC-CCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN-FFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++| +.....+...++. ...++.++.+|++++.            +.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999988 3222222111111 2357889999998763            23


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~  249 (290)
                      ++|+||||||......    ..+++++++++|+.|+.++++++.    +.+ .+||++||.+.+ +.+           .
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~  150 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP-----------G  150 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC-----------C
Confidence            7999999999754322    123456789999999888888764    344 499999998654 321           2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  188 (246)
T 2uvd_A          151 QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIA  188 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEecccc
Confidence            257999999988888887765   48999999998774

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.78  E-value=2.6e-18  Score=152.77  Aligned_cols=135  Identities=16%  Similarity=0.260  Sum_probs=108.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag  189 (290)
                      |+|+||||+||||++++++|+++  |++|++++|+.....+ +.    ..+++++.+|+.++.     +.++|+|||||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LA----DQGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-Hh----hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            47999999999999999999999  9999999986533322 11    246788999998763     567999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ..    .  +  .  ++|+.++.+++++|++.+. +||++||.++|..             ..+|+.+|...|.+++   
T Consensus        76 ~~----~--~--~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-------------~~~y~~~K~~~E~~~~---  129 (287)
T 2jl1_A           76 PH----Y--D--N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-------------IIPLAHVHLATEYAIR---  129 (287)
T ss_dssp             CC----S--C--H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-------------CSTHHHHHHHHHHHHH---
T ss_pred             CC----c--C--c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-------------CCchHHHHHHHHHHHH---
Confidence            52    1  1  1  5799999999999999886 9999999988731             1379999988877664   


Q ss_pred             HHhCCCeeEEEeeee
Q 022900          269 SQFRPSRKACRFFIL  283 (290)
Q Consensus       269 ~~~gl~~~ilR~~~l  283 (290)
                       .++++++++|++.+
T Consensus       130 -~~~~~~~ilrp~~~  143 (287)
T 2jl1_A          130 -TTNIPYTFLRNALY  143 (287)
T ss_dssp             -HTTCCEEEEEECCB
T ss_pred             -HcCCCeEEEECCEe
Confidence             47999999999764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.8e-18  Score=153.75  Aligned_cols=161  Identities=19%  Similarity=0.075  Sum_probs=121.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++|+++||||+|+||.+++++|+++|++|+++++......+.+....  ...++.++.+|++++.            +.
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999998654333322222221  2457899999998763            24


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ++|+||||||........    +++++++++|+.|++++++++.+..   .+||++||...+....          ...+
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  174 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP----------SYGI  174 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT----------TCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC----------CchH
Confidence            799999999976433322    2356789999999999999987642   3899999987653211          2247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  209 (267)
T 3u5t_A          175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTA  209 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCc
Confidence            9999999999999999875   7888899888764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.78  E-value=1.5e-18  Score=157.97  Aligned_cols=161  Identities=12%  Similarity=0.063  Sum_probs=122.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC--------chhhhhcc-----cCCCCeEEEEccccccc---
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG--------RKENVMHH-----FGNPNFELIRHDVVEPL---  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~-----~~~~~v~~~~~D~~~~~---  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|....        ..+.+...     ....++.++.+|++++.   
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            678999999999999999999999999999999875211        12222211     12457899999998763   


Q ss_pred             ---------ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCC
Q 022900          178 ---------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPL  238 (290)
Q Consensus       178 ---------~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~  238 (290)
                               +.++|+||||||.......    .++++.++++|+.|++++++++.+    .+  .+||++||.+.+....
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~  203 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP  203 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence                     2479999999997644332    234677899999999999998743    33  3899999987653211


Q ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          239 QHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       239 ~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                                ...+|+.+|.+.+.+.+.++.++   |+.+..++|+.+.
T Consensus       204 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  242 (317)
T 3oec_A          204 ----------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVN  242 (317)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccc
Confidence                      22579999999999999988874   8999999998774

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.78  E-value=1.5e-18  Score=152.72  Aligned_cols=161  Identities=11%  Similarity=0.007  Sum_probs=119.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~------------  177 (290)
                      .++|+++||||+|+||.++++.|+++|++|++++|+.....+...++.    ...++.++.+|++++.            
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            578899999999999999999999999999999986433333222221    2267889999998763            


Q ss_pred             ccCCCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +.++|+||||||.......+   +++++++++|+.|+.++++++.    +.+ .+||++||.+.+...          .+
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~  154 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF----------AD  154 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------CC
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC----------CC
Confidence            24799999999975443332   3356789999999999999874    334 499999997654210          12


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.++.++   |+.+..++|+.+.
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  192 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVN  192 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            3589999999999898888775   7888899988764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.78  E-value=2e-18  Score=155.06  Aligned_cols=172  Identities=17%  Similarity=0.067  Sum_probs=121.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEcccccc-c------------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEP-L------------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~-~------------  177 (290)
                      ..++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++.  ...++.++.+|++++ .            
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999987544433333332  235799999999986 2            


Q ss_pred             ccCCCEEEEcccCCCCC----------------------------------CCCCChHHHHHHHHHHHHHHHHHHHH---
Q 022900          178 LLEVDQIYHLACPASPV----------------------------------HYKFNPVKTIKTNVVGTLNMLGLAKR---  220 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~----------------------------------~~~~~~~~~~~~Nv~gt~~ll~a~~~---  220 (290)
                      +.++|+||||||.....                                  ...+++++++++|+.|+.++++++..   
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            24799999999975321                                  01223466799999999999998753   


Q ss_pred             -cC-CeEEEEcCCccccCC-CC-------------------------------CCCCCCCC-CCCChhhhhHHHHHHHHH
Q 022900          221 -VG-ARFLLTSTSEVYGDP-LQ-------------------------------HPQKETYW-GNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       221 -~~-~riV~vSS~~vyg~~-~~-------------------------------~~~~E~~~-~~~~py~~~k~~~e~~~~  265 (290)
                       .+ .+||++||.+.+... ..                               ....+..| .....|+.+|.+.+.+++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence             23 499999998654211 00                               01111111 123579999999999999


Q ss_pred             HHHHHh-CCCeeEEEeeeee
Q 022900          266 VFISQF-RPSRKACRFFILL  284 (290)
Q Consensus       266 ~~~~~~-gl~~~ilR~~~lr  284 (290)
                      .++.++ ++.+..+.|+.+.
T Consensus       249 ~la~e~~~i~v~~v~PG~v~  268 (311)
T 3o26_A          249 VLANKIPKFQVNCVCPGLVK  268 (311)
T ss_dssp             HHHHHCTTSEEEEECCCSBC
T ss_pred             HHHhhcCCceEEEecCCcee
Confidence            999886 6777777777654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.78  E-value=1e-18  Score=152.08  Aligned_cols=158  Identities=13%  Similarity=-0.027  Sum_probs=117.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +|+|+||||+|+||.+++++|+++|++|+++ +|+.....+....+. ...++.++.+|++++.            +.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999995 664322221111111 1346888999998763            2379


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||......    ..+++++++++|+.|+.++++++.+    .+ .+||++||.+. ++.+           ...
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~  149 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----------GQA  149 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC-----------CCc
Confidence            99999999754322    2234567899999999999998754    34 49999999865 4421           235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.+..+   .|++++++||+.+.
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  185 (244)
T 1edo_A          150 NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIA  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccc
Confidence            7999999998888888876   48899999998774

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.78  E-value=1.7e-18  Score=153.77  Aligned_cols=163  Identities=9%  Similarity=-0.034  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      ...++|+|+||||+|+||.+++++|+++|++|++++|+.....+.+....  ...++.++.+|++++.            
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999985433333322222  2457999999998763            


Q ss_pred             ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ..++|+||||||.......    .+++++++++|+.|+.++++++.+    .+ .+||++||.+.+...          .
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  174 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN----------M  174 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC----------C
Confidence            2479999999997654332    234577899999999999888743    34 499999998764211          1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.+..+   .++.+..+.|+.+.
T Consensus       175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  213 (271)
T 4iin_A          175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIE  213 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCccc
Confidence            2358999999999999988877   47888888887764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.77  E-value=1.8e-18  Score=153.92  Aligned_cols=164  Identities=14%  Similarity=0.038  Sum_probs=117.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++++.            +.
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999987544332221111 1357889999998763            23


Q ss_pred             CCCEEEEcccCCCC-CCC-----CCChHHHHHHHHHHHHH----HHHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASP-VHY-----KFNPVKTIKTNVVGTLN----MLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~-~~~-----~~~~~~~~~~Nv~gt~~----ll~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      ++|+||||||.... ...     .+++++++++|+.|+.+    +++.+++.+ .+||++||.+.+...        ...
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------~~~  182 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN--------IPQ  182 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------C
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC--------CCC
Confidence            59999999997543 222     12356689999999654    455555555 599999998765320        011


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHhCC--CeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQFRP--SRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~gl--~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.+..+++-  .+.+++|+.+.
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~  220 (279)
T 3ctm_A          183 LQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYID  220 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBS
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCc
Confidence            2357999999999999999887522  77788887653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.77  E-value=1.8e-18  Score=153.68  Aligned_cols=151  Identities=17%  Similarity=0.047  Sum_probs=116.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+          ...+.+|+++..            +.++
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~----------~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA----------DLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC----------SEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh----------hhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999999999999999999886433221          122367886653            3479


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||.......    .+++++++++|+.|+.++++++    ++.+ .+||++||.+.+...          ....+
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~  165 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG----------PGHAL  165 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC----------TTBHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC----------CCChH
Confidence            999999998654332    2345678999999999999997    3444 499999998765311          12357


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  200 (266)
T 3uxy_A          166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVN  200 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCc
Confidence            9999999999999988775   8899999998764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.77  E-value=1.3e-18  Score=154.33  Aligned_cols=162  Identities=15%  Similarity=0.061  Sum_probs=121.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh-hccc-CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV-MHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..++|+++||||+|+||.+++++|+++|++|+++++......+.. .... ...++.++.+|+++..            +
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467889999999999999999999999999999985432222221 1111 2457999999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||.......    .++++.++++|+.|+.++++++..    .+ .+||++||.+.+....          .
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~  171 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF----------G  171 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------T
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC----------C
Confidence            479999999997644332    234567899999999999998743    33 4999999986652111          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.+..++   |+.+..+.|+.+.
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  209 (269)
T 3gk3_A          172 QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLA  209 (269)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence            2579999999999888888764   7888899988764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.77  E-value=9e-18  Score=148.76  Aligned_cols=161  Identities=12%  Similarity=0.058  Sum_probs=124.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..+++|+++||||+++||+++++.|+++|++|++++|+.+.. +.+..+. ...++.++.+|++++.            +
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG-AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH-HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH-HHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999976543 2222221 3467899999998773            4


Q ss_pred             cCCCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccc-cCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVY-GDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vy-g~~~~~~~~E~~~~~~  250 (290)
                      +++|++|||||.......+   +++++++++|+.|++++++++.    +.+.+||++||.+.+ +.+           ..
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~-----------~~  150 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG-----------NT  150 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS-----------SC
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC-----------Cc
Confidence            5799999999975433333   3467789999999999998864    334599999998754 322           12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+...+.+.++.+   +|+.+..+-|+.+.
T Consensus       151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~  187 (258)
T 4gkb_A          151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVM  187 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence            47999999998888888865   48888888888653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.77  E-value=4.1e-18  Score=149.95  Aligned_cols=155  Identities=14%  Similarity=0.162  Sum_probs=116.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      +|+|+||||+++||+++++.|+++|++|++++|+.+...+...   ...++..+.+|++++.            ++++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999985332222221   3457889999998873            457999


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      +|||||.......    .+++++++++|+.|++++.+++.    +.+.+||++||...+....          ...+|+.
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~----------~~~~Y~a  148 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP----------DSEAYAS  148 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT----------TCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC----------CCHHHHH
Confidence            9999997644332    23567899999999999988864    3445999999986542111          1247999


Q ss_pred             hHHHHHHHHHHHHHHh--CCCeeEEEeeee
Q 022900          256 YFFSFSLIFLVFISQF--RPSRKACRFFIL  283 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~--gl~~~ilR~~~l  283 (290)
                      +|.+...+.+.++.++  ++.+..+-|+.+
T Consensus       149 sKaal~~ltk~lA~ela~~IrVN~I~PG~i  178 (247)
T 3ged_A          149 AKGGIVALTHALAMSLGPDVLVNCIAPGWI  178 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEecCcC
Confidence            9999988888888876  455555555543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.77  E-value=1.5e-18  Score=152.80  Aligned_cols=157  Identities=17%  Similarity=0.103  Sum_probs=119.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +|+++||||+|+||.+++++|+++|  +.|++++|+.....+.....  ..++.++.+|++++.            +.++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            5799999999999999999999985  68888887543322222221  357899999998773            2479


Q ss_pred             CEEEEcccCCCC-CC----CCCChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |+||||||...+ ..    ..++++.++++|+.|+.++++++    ++.+.+||++||.+.+...          ....+
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~----------~~~~~  149 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF----------SSWGA  149 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSS----------CCSHH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCC----------CCcch
Confidence            999999997533 11    22345678999999999999987    4445699999998765321          12358


Q ss_pred             hhhhHHHHHHHHHHHHHHh-CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF-RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~-gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.++ ++.+..+.|+.+.
T Consensus       150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~  182 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVD  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCccc
Confidence            9999999999999998875 8888899988764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.77  E-value=1.2e-18  Score=151.63  Aligned_cols=158  Identities=11%  Similarity=0.034  Sum_probs=116.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhccc-CCCCeEE-EEccccccc------------ccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFEL-IRHDVVEPL------------LLE  180 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~v~~-~~~D~~~~~------------~~~  180 (290)
                      +|+|+||||+|+||.+++++|+++|++|+++ +|+.....+....+. ...++.. +.+|+++..            +.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 664322222111111 1345666 889998763            247


Q ss_pred             CCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~  250 (290)
                      +|+||||||......    ..++++.++++|+.|+.++++++    ++.+ .+||++||.+. ++.+           ..
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~  149 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP-----------GQ  149 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------SB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------CC
Confidence            999999999754322    22345678999999977777665    3445 49999999864 4421           22


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+.+++   |++++++||+.+.
T Consensus       150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  186 (245)
T 2ph3_A          150 ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIE  186 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeec
Confidence            579999999999888888775   8999999998874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.77  E-value=1.8e-18  Score=154.41  Aligned_cols=159  Identities=14%  Similarity=0.028  Sum_probs=123.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+...+...++  ..++..+.+|++++.            +++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--GGGAVGIQADSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999998654444433333  357888999998773            457


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +|++|||||........    ++|++++++|+.|++++++++.+..   .+||++||.+.+-...          ...+|
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~----------~~~~Y  173 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP----------AFSVY  173 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT----------TCHHH
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC----------CchHH
Confidence            99999999975443332    3567899999999999999987643   3899999976542111          12479


Q ss_pred             hhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      +.+|.+...+.+.++.++   |+.+..+-|+.+
T Consensus       174 ~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i  206 (273)
T 4fgs_A          174 AASKAALRSFARNWILDLKDRGIRINTLSPGPT  206 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence            999999999898888775   566777777655

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.77  E-value=1.9e-18  Score=153.09  Aligned_cols=160  Identities=14%  Similarity=0.016  Sum_probs=120.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC-Cchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT-GRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++|+|+||||+|+||.+++++|+++|++|+++++... ...+....+. ...++.++.+|++++.            +.
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999999987664322 2222222221 3467999999998763            23


Q ss_pred             CCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~-----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~  248 (290)
                      ++|+||||||......    ..++++.++++|+.|+.++++++.     +.+ .+||++||.+.+ +..           
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  172 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR-----------  172 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT-----------
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC-----------
Confidence            7999999999765433    223467789999999999999873     333 499999997654 321           


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+++.++.++   |+++..++|+.+.
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  211 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLID  211 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeec
Confidence            23579999999888888888765   7888899998764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.77  E-value=5.2e-18  Score=149.03  Aligned_cols=155  Identities=12%  Similarity=0.081  Sum_probs=116.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cccCCCEEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIY  185 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~vD~vi  185 (290)
                      ...++|+|+||||+|+||.+++++|+++|++|++++|+.    +...+.   .++.++ +|+.+.      .+.++|+||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~~~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv   86 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE----ELLKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILV   86 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH----HHHHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEE
Confidence            457899999999999999999999999999999999853    222222   256667 888211      123799999


Q ss_pred             EcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhh
Q 022900          186 HLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY  256 (290)
Q Consensus       186 h~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~  256 (290)
                      ||||.......    .++++.++++|+.|+.++++++    ++.+ .+||++||.+.|...          ....+|+.+
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~~s  156 (249)
T 1o5i_A           87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI----------ENLYTSNSA  156 (249)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTBHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC----------CCCchHHHH
Confidence            99997543322    2345678999999998887664    4445 499999999887521          122579999


Q ss_pred             HHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          257 FFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       257 k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |.+.+.+.+.+..+   +|+++++++|+.+.
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  187 (249)
T 1o5i_A          157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTE  187 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCc
Confidence            99988888888775   58999999998775

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.77  E-value=8e-19  Score=154.66  Aligned_cols=158  Identities=18%  Similarity=0.163  Sum_probs=116.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----------ccC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLE  180 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------~~~  180 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|..   .+.....  ..++.++.+|++++.           +.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG---EDVVADL--GDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC---HHHHHHT--CTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch---HHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            346789999999999999999999999999999999832   2222222  457899999998763           247


Q ss_pred             CCEEEEcccCCCCC--------CCCCChHHHHHHHHHHHHHHHHHHHHc------------C-CeEEEEcCCccccCCCC
Q 022900          181 VDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKRV------------G-ARFLLTSTSEVYGDPLQ  239 (290)
Q Consensus       181 vD~vih~Ag~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~a~~~~------------~-~riV~vSS~~vyg~~~~  239 (290)
                      +|+||||||.....        ...+++++++++|+.|+.++++++.+.            + .+||++||.+.+.... 
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  158 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI-  158 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH-
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC-
Confidence            99999999974321        233456789999999999999987642            2 3899999987653110 


Q ss_pred             CCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          240 HPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       240 ~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                               ...+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       159 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~  197 (257)
T 3tl3_A          159 ---------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFD  197 (257)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCcc
Confidence                     12479999999988888888764   7888899988764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.77  E-value=5.4e-18  Score=148.67  Aligned_cols=150  Identities=17%  Similarity=0.081  Sum_probs=114.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.....+          +..+.+|++++.            +.++
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG----------LFGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----------SEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH----------hcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999986433221          113778987763            2468


Q ss_pred             CEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccc-cCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVY-GDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~~~  251 (290)
                      |+||||||......    ..+++++++++|+.|+.++++++.+    .+ .+||++||.+.+ +.+           ...
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~  151 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-----------NQA  151 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC-----------CCh
Confidence            99999999754322    2234677899999999999998753    44 499999998654 321           235


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.+..+   +|+.+++++|+.+.
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  187 (247)
T 1uzm_A          152 NYAASKAGVIGMARSIARELSKANVTANVVAPGYID  187 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCc
Confidence            7999999998888888876   48899999998764

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=2.8e-18  Score=148.86  Aligned_cols=148  Identities=17%  Similarity=0.106  Sum_probs=117.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----c------cCCCEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L------LEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~------~~vD~v  184 (290)
                      +|+|+||||+|+||.+++++|+++|++|++++|+.. .          .++.++.+|++++.     +      .++|+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            579999999999999999999999999999998643 1          23578889998763     1      278999


Q ss_pred             EEcccCCCCCCCC----C----ChHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEcCCccccCCCCCCCCCC
Q 022900          185 YHLACPASPVHYK----F----NPVKTIKTNVVGTLNMLGLAKRV----G-------ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       185 ih~Ag~~~~~~~~----~----~~~~~~~~Nv~gt~~ll~a~~~~----~-------~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      |||||........    .    ++++++++|+.++.++++++.+.    +       .+||++||.+.|....       
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  143 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  143 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-------
Confidence            9999975433222    1    56778999999999999988642    1       1899999998875321       


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ...+|+.+|.+.+.+++.+..++   |++++++||+.+.
T Consensus       144 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  182 (242)
T 1uay_A          144 ---GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFD  182 (242)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCS
T ss_pred             ---CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCc
Confidence               23589999999999888888764   8999999998874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.77  E-value=3.3e-18  Score=148.19  Aligned_cols=157  Identities=11%  Similarity=-0.020  Sum_probs=118.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc---------cCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL---------LEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---------~~vD~vih  186 (290)
                      ||+|+||||+|+||.+++++|+++|++|++++|+.....+....+  ..++.++.+|++++..         ...|+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            468999999999999999999999999999998643333322222  3578889999987632         22499999


Q ss_pred             cccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHH
Q 022900          187 LACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       187 ~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      |||.......    .+++++++++|+.|+.++++++.+.    +.+||++||...+...          ....+|+.+|.
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~asKa  148 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK----------AQESTYCAVKW  148 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC----------TTCHHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC----------CCCchhHHHHH
Confidence            9997543332    2345678999999999999987543    2389999998776321          12358999999


Q ss_pred             HHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          259 SFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       259 ~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~  177 (230)
T 3guy_A          149 AVKGLIESVRLELKGKPMKIIAVYPGGMA  177 (230)
T ss_dssp             HHHHHHHHHHHHTTTSSCEEEEEEECCC-
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEECCccc
Confidence            9999999998875   7888888887664

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.77  E-value=2.7e-18  Score=150.00  Aligned_cols=162  Identities=19%  Similarity=0.140  Sum_probs=117.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccc--cccc-----------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDV--VEPL-----------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~--~~~~-----------  177 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+...++.  ...++.++..|+  ++..           
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999986433333222221  234566777666  5542           


Q ss_pred             -ccCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                       +.++|+||||||...+..     ..+++++++++|+.|+.++++++.    +.+ .+||++||...+...         
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  161 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR---------  161 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC---------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC---------
Confidence             247999999999753222     223467789999999999999984    333 389999997655321         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF----RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~ilR~~~lr  284 (290)
                       ....+|+.+|.+.+.+++.++.++    ++.+..+.|+.+.
T Consensus       162 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~  202 (247)
T 3i1j_A          162 -ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATR  202 (247)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCS
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Confidence             123579999999999999988775    5666677776653

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.77  E-value=2.6e-18  Score=157.24  Aligned_cols=161  Identities=9%  Similarity=-0.062  Sum_probs=121.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEe-CCCCCchhhhhcc--cCCCCeEEEEccccccc-------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHH--FGNPNFELIRHDVVEPL-------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~-------------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++ |+.....+....+  ....++.++.+|++++.             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5678999999999999999999999999999999 7543222222222  12357899999998765             


Q ss_pred             ----c------------cCCCEEEEcccCCCCCCC------------------CCChHHHHHHHHHHHHHHHHHHH----
Q 022900          178 ----L------------LEVDQIYHLACPASPVHY------------------KFNPVKTIKTNVVGTLNMLGLAK----  219 (290)
Q Consensus       178 ----~------------~~vD~vih~Ag~~~~~~~------------------~~~~~~~~~~Nv~gt~~ll~a~~----  219 (290)
                          .            .++|+||||||.......                  .++++.++++|+.|++++++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                1            369999999997543222                  22345689999999999999875    


Q ss_pred             HcC-------CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          220 RVG-------ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       220 ~~~-------~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+       .+||++||...+...          ....+|+.+|.+.+.+.+.++.++   |+.++.++|+.+.
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  268 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV  268 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred             hcCCcCCCCCcEEEEECchhhccCC----------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence            333       489999998765321          123579999999999998888765   8899999998764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.77  E-value=6.3e-18  Score=151.19  Aligned_cols=162  Identities=15%  Similarity=0.144  Sum_probs=120.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc--cCCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~------------~  178 (290)
                      ..++|+|+||||+|+||.+++++|+++|++|++++|+.....+...++  .+..++.++.+|++++.            +
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            367899999999999999999999999999999998643322222111  12346889999998763            2


Q ss_pred             cCCCEEEEc-ccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHL-ACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~-Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .++|+|||| ||.......+   ++++.++++|+.|+.++++++.+    .+.+||++||.+.+...          ...
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  174 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY----------PMV  174 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC----------TTC
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC----------CCc
Confidence            479999999 5654322222   23466899999999999998754    34599999998765321          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF-----RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+..++     ++.+++++|+.+.
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~  213 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID  213 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC
Confidence            579999999988888887665     7888899988764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.77  E-value=2e-18  Score=150.69  Aligned_cols=152  Identities=17%  Similarity=0.064  Sum_probs=117.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------c--c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L--L  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~--~  179 (290)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+.....         ....++.+|++++.            +  .
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999998643321         13466788987652            2  4


Q ss_pred             CCCEEEEcccCCCCCCC-C----CChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY-K----FNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~-~----~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|+||||||....... .    +++++++++|+.|+.++++++.+.   +.+||++||.+.+...          ....
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  145 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT----------PGMI  145 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------TTBH
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC----------CCch
Confidence            79999999997543322 1    335678999999999999998764   2489999998776421          1225


Q ss_pred             hhhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF-----RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.+..++     |++++.++|+.+.
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~  183 (241)
T 1dhr_A          146 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLD  183 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCccc
Confidence            79999999999999888764     5888999998764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.77  E-value=8.5e-18  Score=150.60  Aligned_cols=161  Identities=14%  Similarity=0.055  Sum_probs=122.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-------hhhccc-CCCCeEEEEccccccc------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-------NVMHHF-GNPNFELIRHDVVEPL------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~-~~~~v~~~~~D~~~~~------  177 (290)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|+.....+       ....+. ...++.++.+|++++.      
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            44678999999999999999999999999999999997653221       111111 2457899999998763      


Q ss_pred             ------ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCC
Q 022900          178 ------LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       178 ------~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~  242 (290)
                            +.++|+||||||........    +++++++++|+.|++++++++.+.    + .+||++||...+...     
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  159 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-----  159 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-----
Confidence                  24799999999976443322    235678999999999999998653    3 489999997654211     


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                          +....+|+.+|.+.+.+++.++.+   +|+.+..+.|+
T Consensus       160 ----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG  197 (285)
T 3sc4_A          160 ----WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPR  197 (285)
T ss_dssp             ----GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECS
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCC
Confidence                012257999999999999988876   58889999887

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.77  E-value=5.7e-18  Score=149.60  Aligned_cols=161  Identities=13%  Similarity=-0.010  Sum_probs=120.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+|+||.+++++|+++|++|+++++..... .+....+. ...++.++.+|++++.            ++
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999985543222 22222222 2457889999998763            24


Q ss_pred             CCCEEEEcccCCCCCC-C----CCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccc-cCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-Y----KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVY-GDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vy-g~~~~~~~~E~~~~~~  250 (290)
                      ++|+||||||...... .    .+++++++++|+.|+.++++++.+..   .+||++||.+.+ ...          ...
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~  155 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG----------PGA  155 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS----------TTC
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC----------CCc
Confidence            7999999999652222 1    22356789999999999999997753   389999998776 211          123


Q ss_pred             ChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.++.+++  +.+..+.|+.+.
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~  191 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMIS  191 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCc
Confidence            5799999999999999998875  666677776553

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.77  E-value=4e-19  Score=150.75  Aligned_cols=152  Identities=13%  Similarity=0.094  Sum_probs=117.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc---CCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL---EVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~---~vD~vih~A  188 (290)
                      |+|+||||+|+||++++++|+++  +|++++|+.....+..... .  . +++.+|++++.     +.   ++|+|||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-~--~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-G--A-RALPADLADELEAKALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-T--C-EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-c--C-cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence            57999999999999999999998  9999988532222221111 2  1 78889998763     22   799999999


Q ss_pred             cCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q 022900          189 CPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLI  263 (290)
Q Consensus       189 g~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~  263 (290)
                      |......    ..+++++++++|+.|+.++++++++.+ .+||++||.+.|...          .+..+|+.+|...+.+
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV----------PGFAAYAAAKGALEAY  144 (207)
T ss_dssp             CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS----------TTBHHHHHHHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------CCcchHHHHHHHHHHH
Confidence            9754322    234567899999999999999996555 499999999887421          1335899999999999


Q ss_pred             HHHHHHH---hCCCeeEEEeeeee
Q 022900          264 FLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       264 ~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ++.+..+   +|++++++||+.+.
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~  168 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVA  168 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBC
T ss_pred             HHHHHHHHhhhCCEEEEEecCccc
Confidence            9988877   59999999998875

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.77  E-value=8.5e-18  Score=147.68  Aligned_cols=160  Identities=13%  Similarity=0.073  Sum_probs=121.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccccc-------cCCCEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL-------LEVDQI  184 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~-------~~vD~v  184 (290)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+..  ++....+. ...++..+.+|++++..       .++|++
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            478999999999999999999999999999999998643  22222221 34678999999988742       469999


Q ss_pred             EEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |||||.......    .++|++++++|+.|++++++++.    +.+  .+||++||.+.+-...          ...+|+
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~----------~~~~Y~  153 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI----------RVPSYT  153 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS----------SCHHHH
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC----------CChHHH
Confidence            999997654432    34578899999999999998753    333  3999999976542111          124799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|.....+.+.++.++   |+.+..+-|+.+.
T Consensus       154 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~  186 (247)
T 4hp8_A          154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIE  186 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCC
Confidence            99999988888888764   7777777777653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=4.8e-18  Score=150.37  Aligned_cols=157  Identities=16%  Similarity=0.045  Sum_probs=117.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....+.   ...++.++.+|++++.            +
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            567899999999999999999999999999999986432222122221   1346889999998763            2


Q ss_pred             cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHH----HHc----CCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----KRV----GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~----~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      .++|+||||||...    ..++++++++|+.|+.++++++    ++.    +.+||++||.+.+....          ..
T Consensus        85 g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  150 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------QQ  150 (267)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------TC
T ss_pred             CCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC----------CC
Confidence            46899999999642    4678899999999887776654    333    24899999988764211          22


Q ss_pred             ChhhhhHHHHHHHHHHHH-----HHhCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFI-----SQFRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~-----~~~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+++.+.     ...|+++++++|+.+.
T Consensus       151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~  189 (267)
T 2gdz_A          151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN  189 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCc
Confidence            479999999888887642     2358899999998764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.77  E-value=2.8e-18  Score=154.50  Aligned_cols=161  Identities=13%  Similarity=-0.024  Sum_probs=122.1

Q ss_pred             CCCCCEEEEEcCCch--HHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------
Q 022900          113 KRKGLRIVVTGGAGF--VGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------  177 (290)
                      .+++|+++||||+|+  ||.++++.|+++|++|++++|+.. ..+.+.+.. ...++.++.+|++++.            
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH-HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            367899999999976  999999999999999999998621 112222221 1246889999998773            


Q ss_pred             ccCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      +.++|+||||||....    ..    ..++++.++++|+.|+.++++++.+..   .+||++||.+.+...         
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------  177 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM---------  177 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC---------
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC---------
Confidence            2479999999997541    11    223467789999999999999987643   389999998765321         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ....+|+.+|.+.+.+.+.++.++   |+.+..++|+.+.
T Consensus       178 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  217 (293)
T 3grk_A          178 -PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIK  217 (293)
T ss_dssp             -TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCc
Confidence             123589999999999998888764   7889999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.77  E-value=4.2e-18  Score=149.74  Aligned_cols=152  Identities=15%  Similarity=0.084  Sum_probs=114.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ....+|+|+||||+|+||.+++++|+++|++|++++|+.....+           ..+.+|+++..            +.
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----------HSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----------EEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----------cceEEEeCCHHHHHHHHHHHHHHcC
Confidence            44567899999999999999999999999999999986533221           23556666542            34


Q ss_pred             CCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|+||||||......     ..+++++++++|+.|+.++++++.+..   .+||++||.+.+...          ....
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  156 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT----------SGMI  156 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------TTBH
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC----------CCCc
Confidence            6899999999754322     123456789999999999999987643   389999998765311          1235


Q ss_pred             hhhhhHHHHHHHHHHHHHH-----hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ-----FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~-----~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.+     +++.+.+++|+.+.
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~  194 (251)
T 3orf_A          157 AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLD  194 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCc
Confidence            7999999999999998877     47888899888764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.76  E-value=4.6e-18  Score=152.79  Aligned_cols=161  Identities=9%  Similarity=-0.062  Sum_probs=120.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEe-CCCCCchhhhhcc--cCCCCeEEEEccccccc-------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHH--FGNPNFELIRHDVVEPL-------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~-------------  177 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++ |+.....+...++  ....++.++.+|++++.             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            5678999999999999999999999999999999 7543222222222  12457899999998765             


Q ss_pred             ----c------------cCCCEEEEcccCCCCCCC------------------CCChHHHHHHHHHHHHHHHHHHH----
Q 022900          178 ----L------------LEVDQIYHLACPASPVHY------------------KFNPVKTIKTNVVGTLNMLGLAK----  219 (290)
Q Consensus       178 ----~------------~~vD~vih~Ag~~~~~~~------------------~~~~~~~~~~Nv~gt~~ll~a~~----  219 (290)
                          .            .++|+||||||.......                  .++++.++++|+.|+.++++++.    
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                1            369999999997543222                  22345689999999999999875    


Q ss_pred             HcC-------CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          220 RVG-------ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       220 ~~~-------~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+       .+||++||...+...          ....+|+.+|...+.+.+.+..++   |+.+..++|+.+.
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~~~----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  231 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV  231 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             hcCCCCCCCCcEEEEEechhhcCCC----------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCcc
Confidence            333       489999998765321          123579999999988888888764   7889999988763

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.76  E-value=1.1e-18  Score=147.66  Aligned_cols=142  Identities=16%  Similarity=0.099  Sum_probs=111.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vih~A  188 (290)
                      |+|+||||+|+||++++++|+ +|++|++++|+..                .+.+|++++.        +.++|+|||||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~a   66 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVSAT   66 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEECC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEECC
Confidence            479999999999999999999 9999999998532                3567887653        23589999999


Q ss_pred             cCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHH
Q 022900          189 CPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFS  261 (290)
Q Consensus       189 g~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e  261 (290)
                      |........    +++.+.+++|+.++.++++++.+.   +.+||++||.+.+...          .+..+|+.+|...+
T Consensus        67 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           67 GSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI----------VQGASAAMANGAVT  136 (202)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC----------TTCHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC----------CccHHHHHHHHHHH
Confidence            965433222    234567899999999999999876   4589999998765321          12358999999999


Q ss_pred             HHHHHHHHHh--CCCeeEEEeeeeec
Q 022900          262 LIFLVFISQF--RPSRKACRFFILLY  285 (290)
Q Consensus       262 ~~~~~~~~~~--gl~~~ilR~~~lr~  285 (290)
                      .+++.+..++  +++++++||+.+..
T Consensus       137 ~~~~~~~~e~~~gi~v~~v~pg~v~~  162 (202)
T 3d7l_A          137 AFAKSAAIEMPRGIRINTVSPNVLEE  162 (202)
T ss_dssp             HHHHHHTTSCSTTCEEEEEEECCBGG
T ss_pred             HHHHHHHHHccCCeEEEEEecCccCC
Confidence            9998888764  89999999998754

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.76  E-value=7.8e-18  Score=150.55  Aligned_cols=159  Identities=16%  Similarity=0.062  Sum_probs=119.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.....+....  ...++.++.+|++++.            +.++
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA--HGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--TBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999864332222222  2457899999998763            3479


Q ss_pred             CEEEEcccCCCCCCC-----C----CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY-----K----FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       182 D~vih~Ag~~~~~~~-----~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      |+||||||.......     .    ++++.++++|+.|+.++++++.+    .+.+||++||...+...          .
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  150 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN----------G  150 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS----------S
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC----------C
Confidence            999999997532211     1    12567899999999999998753    33599999998765311          1


Q ss_pred             CCChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+.+.++.+++  +.+..+.|+.+.
T Consensus       151 ~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~  188 (281)
T 3zv4_A          151 GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMN  188 (281)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCc
Confidence            224799999999999999998765  666677776553

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.76  E-value=3.9e-18  Score=149.13  Aligned_cols=156  Identities=15%  Similarity=0.038  Sum_probs=107.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----------ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------~~~vD  182 (290)
                      +++|+++||||+||||.+++++|++ |+.|++++|+...    ........++.++.+|++++.           +.++|
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEH----LAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHH----HHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHH----HHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            5678999999999999999999987 9999999875322    222222356889999997652           23699


Q ss_pred             EEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          183 QIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      +||||||........    ++++.++++|+.|+.++++++.    +.+.+||++||.+.+....          ...+|+
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  147 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP----------GNTIYA  147 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------------CHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC----------CchHHH
Confidence            999999976443322    2356789999999999988864    3346999999988764221          235899


Q ss_pred             hhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+++.++.+   .|+.+..++|+.+.
T Consensus       148 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  180 (245)
T 3e9n_A          148 ASKHALRGLADAFRKEEANNGIRVSTVSPGPTN  180 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCcc
Confidence            9999999999998876   57999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.76  E-value=8.1e-18  Score=148.73  Aligned_cols=161  Identities=12%  Similarity=-0.005  Sum_probs=122.3

Q ss_pred             CCCCCEEEEEcCCch--HHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEccccccc----------
Q 022900          113 KRKGLRIVVTGGAGF--VGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL----------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~----------  177 (290)
                      .+++|+++||||+|+  ||.+++++|+++|++|++++|+. ...+.+.+.   ....++.++.+|++++.          
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-RLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            367899999999976  99999999999999999999863 222222222   23347999999998773          


Q ss_pred             --ccCCCEEEEcccCCCC----CC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCC
Q 022900          178 --LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKE  244 (290)
Q Consensus       178 --~~~vD~vih~Ag~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E  244 (290)
                        +.++|+||||||....    ..    ..+++..++++|+.|+.++++++.+..   .+||++||.+.+...       
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------  155 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM-------  155 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-------
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC-------
Confidence              2479999999997542    11    122356689999999999999987653   389999998765321       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ....+|+.+|.+.+.+++.++.++   |+.+..++|+.+.
T Consensus       156 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (266)
T 3oig_A          156 ---PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIR  195 (266)
T ss_dssp             ---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence               123579999999999888888764   7888999998764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.76  E-value=2.3e-18  Score=147.96  Aligned_cols=146  Identities=11%  Similarity=0.080  Sum_probs=107.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-----ccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLI-ARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      +|+|+||||+|+||++++++|+ ++|++|++++|+...   ...... ...++.++.+|++++.     +.++|+|||||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a   81 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKT---RIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGA   81 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHH---HSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccc---cchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence            4679999999999999999999 899999999985320   222211 3467999999998763     46899999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCC-hhhhhHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN-PIGTYFFSFSLIFLV  266 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~-py~~~k~~~e~~~~~  266 (290)
                      |..               |+. +.+++++|++.+. +||++||.++|+...... .+....... +|...|...|..+  
T Consensus        82 g~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~-~~~~~~~~~~~y~~~K~~~e~~~--  142 (221)
T 3r6d_A           82 MES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL-EKWTFDNLPISYVQGERQARNVL--  142 (221)
T ss_dssp             CCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH-HHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred             CCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccc-ccccccccccHHHHHHHHHHHHH--
Confidence            852               444 8999999999885 999999999987432210 000001122 6888887666654  


Q ss_pred             HHHHhCCCeeEEEeeeeec
Q 022900          267 FISQFRPSRKACRFFILLY  285 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~  285 (290)
                        +..+++++++||+.+.-
T Consensus       143 --~~~~i~~~~vrpg~v~~  159 (221)
T 3r6d_A          143 --RESNLNYTILRLTWLYN  159 (221)
T ss_dssp             --HHSCSEEEEEEECEEEC
T ss_pred             --HhCCCCEEEEechhhcC
Confidence              35799999999998854

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.76  E-value=3.5e-18  Score=151.29  Aligned_cols=162  Identities=10%  Similarity=-0.070  Sum_probs=119.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc---hhhhhccc-CCCCeEEEEccccccc-----------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR---KENVMHHF-GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~v~~~~~D~~~~~-----------  177 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|.....   .+...++. ...++.++.+|++++.           
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK   87 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998743211   11111111 2457899999998763           


Q ss_pred             -ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                       +.++|+||||||.......    .++++.++++|+.|+.++++++.+..   .+||++||.+.+....          .
T Consensus        88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------~  157 (262)
T 3ksu_A           88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG----------F  157 (262)
T ss_dssp             HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC----------C
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC----------C
Confidence             2479999999997654332    23456789999999999999998752   4899999987654211          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  195 (262)
T 3ksu_A          158 YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMD  195 (262)
T ss_dssp             CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence            2479999999999999999875   7888899988764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.76  E-value=8e-18  Score=146.30  Aligned_cols=148  Identities=11%  Similarity=0.071  Sum_probs=100.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      ..+|+|+||||+|+||++++++|+++| ++|++++|+.....    .. ...+++++.+|++++.     +.++|+||||
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~   95 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH----KP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYAN   95 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC----SS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc----cc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence            457899999999999999999999999 89999998643222    11 2357899999998763     5689999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~  266 (290)
                      ||..       +.       ...+.+++++|++.+. +||++||.++|+........+.......++..+..+     +.
T Consensus        96 a~~~-------~~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  156 (236)
T 3qvo_A           96 LTGE-------DL-------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRA-----AD  156 (236)
T ss_dssp             CCST-------TH-------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHH-----HH
T ss_pred             CCCC-------ch-------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHH-----HH
Confidence            9841       11       1346689999999885 999999999998654432222221233344444432     23


Q ss_pred             HHHHhCCCeeEEEeeeeec
Q 022900          267 FISQFRPSRKACRFFILLY  285 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~  285 (290)
                      +.+..+++++++||+.+..
T Consensus       157 ~l~~~gi~~~~vrPg~i~~  175 (236)
T 3qvo_A          157 AIEASGLEYTILRPAWLTD  175 (236)
T ss_dssp             HHHTSCSEEEEEEECEEEC
T ss_pred             HHHHCCCCEEEEeCCcccC
Confidence            3456799999999998753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.76  E-value=1.7e-17  Score=148.13  Aligned_cols=159  Identities=11%  Similarity=-0.036  Sum_probs=121.5

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGF--VGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+|+  ||.+++++|+++|++|++++|+.  ..+.+.++. ...++.++.+|++++.            +
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            56899999999954  99999999999999999999865  223332221 2245889999998763            2


Q ss_pred             cCCCEEEEcccCCCCC---------CCCCChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCccccCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPV---------HYKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      .++|+||||||.....         ...+++..++++|+.++.++++++...    +.+||++||.+.+...        
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------  173 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM--------  173 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC--------
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC--------
Confidence            4699999999976432         222345678999999999999997642    3599999998765321        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        .....|+.+|.+.+.+++.++.+   .|+.+..++|+.+.
T Consensus       174 --~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~  213 (280)
T 3nrc_A          174 --PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIK  213 (280)
T ss_dssp             --TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCC
T ss_pred             --CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeecccc
Confidence              12357999999999988888876   58999999998775

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.75  E-value=7.2e-18  Score=150.15  Aligned_cols=161  Identities=13%  Similarity=0.058  Sum_probs=120.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh---h----hccc-CCCCeEEEEccccccc-------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---V----MHHF-GNPNFELIRHDVVEPL-------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~---~----~~~~-~~~~v~~~~~D~~~~~-------  177 (290)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+.   +    .... ...++.++.+|++++.       
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999976432211   1    1111 2457899999998773       


Q ss_pred             -----ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCC
Q 022900          178 -----LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQK  243 (290)
Q Consensus       178 -----~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~  243 (290)
                           +.++|+||||||........    +++++++++|+.|++++++++.+    .+ .+||++||.+.+....     
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  157 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-----  157 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-----
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----
Confidence                 24799999999976443322    34567899999999999998754    33 4999999986553100     


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFF  281 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~  281 (290)
                         +....+|+.+|.+.+.+.+.++.++   |+.+..+.|+
T Consensus       158 ---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  195 (274)
T 3e03_A          158 ---WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPR  195 (274)
T ss_dssp             ---HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECC
Confidence               0122469999999999888888764   7888899887

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.75  E-value=4.6e-18  Score=150.84  Aligned_cols=159  Identities=11%  Similarity=0.002  Sum_probs=120.7

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||  +|+||.++++.|+++|++|++++|+.....+.+.+.. ..++.++.+|++++.            +.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999  9999999999999999999999986432212222222 246788999998763            23


Q ss_pred             ---CCCEEEEcccCCCC-----CC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCC
Q 022900          180 ---EVDQIYHLACPASP-----VH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKE  244 (290)
Q Consensus       180 ---~vD~vih~Ag~~~~-----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E  244 (290)
                         ++|+||||||....     ..    ..+++++++++|+.|+.++++++.+..   .+||++||.+.++.+       
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~-------  156 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP-------  156 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT-------
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC-------
Confidence               79999999997541     11    123456789999999999999997642   389999997654321       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                          ...+|+.+|.+.+.+.+.+..++   |+.+..++|+.+.
T Consensus       157 ----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  195 (269)
T 2h7i_A          157 ----AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIR  195 (269)
T ss_dssp             ----TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence                12579999999988888888764   8999999998764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.75  E-value=3.1e-18  Score=150.29  Aligned_cols=154  Identities=10%  Similarity=-0.064  Sum_probs=111.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------c-cCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------L-LEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~-~~vD~vih  186 (290)
                      ||+|+||||+|+||.+++++|+++|++|++++|+......           . +.+|+++..        + .++|+|||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            4689999999999999999999999999999986432211           0 446765542        2 56899999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCC----------------
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKET----------------  245 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~----------------  245 (290)
                      |||....   ...++.++++|+.|+.++++++.    +.+ .+||++||.+.|......+..+.                
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (257)
T 1fjh_A           69 CAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             CCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             CCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhc
Confidence            9996431   24588999999999999999875    333 49999999988732211111000                


Q ss_pred             -C-CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          246 -Y-WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       246 -~-~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       . .....+|+.+|.+.+.+++.+..+   +|+.+++++|+.+.
T Consensus       146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  189 (257)
T 1fjh_A          146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATE  189 (257)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCC
Confidence             0 012246899999888888888765   58999999998764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.75  E-value=7.8e-18  Score=147.18  Aligned_cols=152  Identities=14%  Similarity=0.078  Sum_probs=118.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc----------ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----------LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~----------~~~vD  182 (290)
                      .++|+++||||+|+||.++++.|++ .|+.|++++|+....         ...+.++.+|++++.          ..++|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id   72 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFD   72 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence            3578999999999999999999999 789999998754311         235688999998763          13699


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~  255 (290)
                      +||||||.......    .+++++++++|+.|+.++++++.+..   .+||++||...+....          ...+|+.
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y~a  142 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP----------NSFAYTL  142 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT----------TBHHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC----------CCchhHH
Confidence            99999997643332    23456789999999999999987653   3899999987763211          2247999


Q ss_pred             hHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          256 YFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|.+.+.+.+.++.+   +|+.+..++|+.+.
T Consensus       143 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  174 (244)
T 4e4y_A          143 SKGAIAQMTKSLALDLAKYQIRVNTVCPGTVD  174 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEESCBC
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEecCccC
Confidence            999999999888874   58999999998774

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.75  E-value=4.2e-18  Score=155.21  Aligned_cols=159  Identities=15%  Similarity=0.047  Sum_probs=120.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC----------CCchhhhhccc-CCCCeEEEEccccccc----
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF----------TGRKENVMHHF-GNPNFELIRHDVVEPL----  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~----------~~~~~~~~~~~-~~~~v~~~~~D~~~~~----  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.          ....+...++. ...++.++.+|++++.    
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            36789999999999999999999999999999998861          11112122221 2457889999998763    


Q ss_pred             --------ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEcCCccc
Q 022900          178 --------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLLTSTSEVY  234 (290)
Q Consensus       178 --------~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~-----------~~riV~vSS~~vy  234 (290)
                              +.++|+||||||.......    .+++++++++|+.|++++++++...           +.+||++||.+.+
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence                    2479999999997654332    2346778999999999999987432           1389999998765


Q ss_pred             cCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          235 GDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       235 g~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                      ...          ....+|+.+|.+.+.+++.++.+   +|+.+..+.|+
T Consensus       184 ~~~----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  223 (322)
T 3qlj_A          184 QGS----------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS  223 (322)
T ss_dssp             HCB----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cCC----------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC
Confidence            211          12257999999999999998887   57888899887

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.75  E-value=1.5e-17  Score=148.26  Aligned_cols=161  Identities=17%  Similarity=0.079  Sum_probs=121.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----------ccC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLE  180 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------~~~  180 (290)
                      ...++|+++||||+|+||.+++++|+++|++|++++|+.+...+...++  ..++.++.+|++++.           +.+
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--GNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3467899999999999999999999999999999998644333333332  457999999998763           236


Q ss_pred             CCEEEEc-ccCCCCCCC------C---CChHHHHHHHHHHHHHHHHHHHH----------cC-CeEEEEcCCccccCCCC
Q 022900          181 VDQIYHL-ACPASPVHY------K---FNPVKTIKTNVVGTLNMLGLAKR----------VG-ARFLLTSTSEVYGDPLQ  239 (290)
Q Consensus       181 vD~vih~-Ag~~~~~~~------~---~~~~~~~~~Nv~gt~~ll~a~~~----------~~-~riV~vSS~~vyg~~~~  239 (290)
                      +|++||| ||.......      .   +++++++++|+.|+.++++++..          .+ .+||++||.+.+...  
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  181 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ--  181 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC--
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC--
Confidence            8999999 554322211      1   22577899999999999998752          12 389999998776321  


Q ss_pred             CCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          240 HPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       240 ~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                              ....+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       182 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  221 (281)
T 3ppi_A          182 --------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMK  221 (281)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             --------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCC
Confidence                    123589999999998888888775   7888888888764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.75  E-value=1.3e-17  Score=147.44  Aligned_cols=165  Identities=13%  Similarity=0.035  Sum_probs=122.9

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc--CCCCeEEEEccccccc---------
Q 022900          112 LKRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF--GNPNFELIRHDVVEPL---------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~--~~~~v~~~~~D~~~~~---------  177 (290)
                      ..+++|+|+||||+  |+||.+++++|+++|++|++++|+.... .+.+.++.  ...++.++.+|++++.         
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            34678999999999  9999999999999999999998875544 33333322  2467899999998763         


Q ss_pred             ---ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 ---LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 ---~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                         +.++|+||||||.......    .++++.++++|+.|+.++++++    ++.+ .+||++||.+.+.....      
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  169 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP------  169 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC------
Confidence               2479999999997654332    2345678999999999999987    3334 49999999765422100      


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                        ....+|+.+|.+.+.+++.+..+++  +.+..+.|+.+.
T Consensus       170 --~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~  208 (267)
T 3gdg_A          170 --QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYID  208 (267)
T ss_dssp             --SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEE
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccc
Confidence              1235799999999999999998875  455566666553

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.75  E-value=1e-17  Score=147.73  Aligned_cols=160  Identities=12%  Similarity=-0.026  Sum_probs=119.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-------------~~  179 (290)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+...++. ...++.++.+|++++.             +.
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999986432222222211 1346889999998762             45


Q ss_pred             CCCEEEEcccC--C-------CCC--CCCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCC
Q 022900          180 EVDQIYHLACP--A-------SPV--HYKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQK  243 (290)
Q Consensus       180 ~vD~vih~Ag~--~-------~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~  243 (290)
                      ++|+||||||.  .       .+.  ...++++.++++|+.+++++++++.    +.+ .+||++||.+.+...      
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  156 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM------  156 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC------
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC------
Confidence            68999999952  1       111  1223467789999999998888764    334 499999998776421      


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                           +..+|+.+|.+.+.+.+.++.+   +|+++++++|+.+.
T Consensus       157 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (260)
T 2qq5_A          157 -----FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQ  195 (260)
T ss_dssp             -----SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSC
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccc
Confidence                 2257999999999998888865   48999999998774

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.74  E-value=9.4e-18  Score=147.86  Aligned_cols=160  Identities=10%  Similarity=-0.084  Sum_probs=118.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH---CCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~----------  177 (290)
                      +++|+++||||+|+||.+++++|++   +|++|++++|+.....+...++.   ...++.++.+|++++.          
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999   89999999986433332222221   1457889999998763          


Q ss_pred             ----ccCCC--EEEEcccCCCC--C-----CCCCChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEcCCccccCC
Q 022900          178 ----LLEVD--QIYHLACPASP--V-----HYKFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSEVYGDP  237 (290)
Q Consensus       178 ----~~~vD--~vih~Ag~~~~--~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~------~-~riV~vSS~~vyg~~  237 (290)
                          ++++|  +||||||....  .     ...++++.++++|+.|+.++++++.+.      + .+||++||.+.+...
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence                12578  99999997532  1     122346778999999999999998653      2 379999998776321


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhC-CCeeEEEeeee
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFR-PSRKACRFFIL  283 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~g-l~~~ilR~~~l  283 (290)
                                ....+|+.+|.+.+.+.+.+..+++ +.+..+.|+.+
T Consensus       164 ----------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v  200 (259)
T 1oaa_A          164 ----------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPL  200 (259)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSB
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCc
Confidence                      1235799999999999999998864 55555555544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.74  E-value=1e-17  Score=153.14  Aligned_cols=159  Identities=19%  Similarity=0.089  Sum_probs=118.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh---hhcc----cCCCCeEEEEcccccccc----------
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHH----FGNPNFELIRHDVVEPLL----------  178 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~----~~~~~v~~~~~D~~~~~~----------  178 (290)
                      +|+|+||||+|+||.+++++|+++|++|++++|........   +...    ....++.++.+|++++..          
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            57899999999999999999999999998887754332221   1111    013578999999987631          


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      .++|+||||||.......    .+++++++++|+.|+.++++++    ++.+ .+||++||.+.+....          .
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~----------~  151 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP----------F  151 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT----------T
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC----------C
Confidence            359999999997533221    2345678999999999999986    3344 4999999987653211          2


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.+..+   +|+.+++++|+.++
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~  189 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH  189 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence            247999999999999888875   68999999998764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.74  E-value=4.7e-17  Score=150.03  Aligned_cols=162  Identities=12%  Similarity=0.031  Sum_probs=122.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-------hhhccc-CCCCeEEEEccccccc------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-------NVMHHF-GNPNFELIRHDVVEPL------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~-~~~~v~~~~~D~~~~~------  177 (290)
                      ..+++|+|+||||+|+||.+++++|+++|++|++++|+.....+       ....+. ...++.++.+|++++.      
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            44788999999999999999999999999999999997654221       111111 2457889999998773      


Q ss_pred             ------ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCC
Q 022900          178 ------LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQ  242 (290)
Q Consensus       178 ------~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~  242 (290)
                            +.++|+||||||........    ++++.++++|+.|++++++++..    .+ .+||++||...+...     
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~-----  195 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV-----  195 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-----
Confidence                  24799999999976443322    33567899999999999999843    33 499999998765321     


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHHh--CCCeeEEEee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQF--RPSRKACRFF  281 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~~--gl~~~ilR~~  281 (290)
                         .......|+.+|.+.+.+++.++.++  ++.+..+.|+
T Consensus       196 ---~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG  233 (346)
T 3kvo_A          196 ---WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPK  233 (346)
T ss_dssp             ---GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECS
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence               01123579999999999999998876  6777777776

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.74  E-value=7.7e-18  Score=145.29  Aligned_cols=142  Identities=15%  Similarity=0.041  Sum_probs=111.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      .++|+++||||+|+||.+++++|+++|++|++++|+..                   +|++++.        +.++|++|
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence            46789999999999999999999999999999987532                   5665542        35799999


Q ss_pred             EcccCCCCC-C----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhH
Q 022900          186 HLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYF  257 (290)
Q Consensus       186 h~Ag~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k  257 (290)
                      ||||..... .    ..+++++++++|+.|+.++++++.+..   .+||++||.+.+...          ....+|+.+|
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~~~~~Y~asK  134 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV----------ANTYVKAAIN  134 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC----------TTCHHHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC----------CCchHHHHHH
Confidence            999975222 1    123456789999999999999997653   389999998776421          1235899999


Q ss_pred             HHHHHHHHHHHHHhC-CCeeEEEeeeee
Q 022900          258 FSFSLIFLVFISQFR-PSRKACRFFILL  284 (290)
Q Consensus       258 ~~~e~~~~~~~~~~g-l~~~ilR~~~lr  284 (290)
                      .+.+.+.+.++.+++ +.+..+.|+.+.
T Consensus       135 ~a~~~~~~~la~e~~~i~vn~v~PG~v~  162 (223)
T 3uce_A          135 AAIEATTKVLAKELAPIRVNAISPGLTK  162 (223)
T ss_dssp             HHHHHHHHHHHHHHTTSEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence            999999999998876 778888887764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.74  E-value=1.2e-17  Score=146.48  Aligned_cols=161  Identities=13%  Similarity=0.012  Sum_probs=121.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC-chhhhhccc-CCCCeEEEEcccccccc-------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVMHHF-GNPNFELIRHDVVEPLL-------------  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~v~~~~~D~~~~~~-------------  178 (290)
                      +++|+++||||+|+||.+++++|+++|++|+++++.... ..+...++. ...++.++.+|+.+...             
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999987543322 222222221 34578889999987631             


Q ss_pred             -----cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCccccCCCCCCCCCCC
Q 022900          179 -----LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       179 -----~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~---~~riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                           .++|+||||||........    +++++++++|+.|+.++++++.+.   +.+||++||.+.+....        
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--------  156 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--------  156 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT--------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC--------
Confidence                 1399999999975433322    234668999999999999998765   24899999987653211        


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                        ...+|+.+|.+.+.+.+.+..++   |+.+..+.|+.+.
T Consensus       157 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (255)
T 3icc_A          157 --DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVK  195 (255)
T ss_dssp             --TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             --CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeec
Confidence              22579999999999998888764   8999999998774

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.73  E-value=1.2e-17  Score=146.09  Aligned_cols=156  Identities=13%  Similarity=0.014  Sum_probs=111.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-e--CCCCCchhhhhcccCCCCeEEEEcccccc-------cccCCCEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-D--NFFTGRKENVMHHFGNPNFELIRHDVVEP-------LLLEVDQIY  185 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-------~~~~vD~vi  185 (290)
                      +|+++||||+|+||.++++.|+++|++|+++ +  |+.....+...++   ...++.+.+-.+.       .+.++|+||
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~g~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---PGTIALAEQKPERLVDATLQHGEAIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---TTEEECCCCCGGGHHHHHGGGSSCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---CCCcccCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999999999999999999999999999 5  7543222222222   1233332222222       235799999


Q ss_pred             EcccCCCC---CCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          186 HLACPASP---VHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       186 h~Ag~~~~---~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      ||||....   ...    .++++.++++|+.|+.++++++.    +.+ .+||++||.+.+....          ...+|
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y  147 (244)
T 1zmo_A           78 SNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA----------YNPLY  147 (244)
T ss_dssp             ECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------TCTTH
T ss_pred             ECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC----------CchHH
Confidence            99997544   222    23456789999999999999874    344 4899999987764211          23579


Q ss_pred             hhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+|.+.+.+.+.+..++   |+.++.++|+.+.
T Consensus       148 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  181 (244)
T 1zmo_A          148 GPARAATVALVESAAKTLSRDGILLYAIGPNFFN  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            999999999888888764   8889999998764

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.73  E-value=7.1e-17  Score=143.22  Aligned_cols=153  Identities=13%  Similarity=0.055  Sum_probs=115.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||.++++.|+++|++|++++|+....         ..+...+.+|++++.            +++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------LPEELFVEADLTTKEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------SCTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999853211         122336788998763            457


Q ss_pred             CCEEEEcccCCCCC--C----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPV--H----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWG  248 (290)
Q Consensus       181 vD~vih~Ag~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~  248 (290)
                      +|++|||||.....  .    ..+++++++++|+.|++++++++.    +.+ .+||++||.+.+ +.+.          
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~----------  148 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPE----------  148 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCC----------
Confidence            99999999964322  1    224567899999999999988864    344 389999997643 2111          


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....|+.+|.+...+.+.++.+   +|+.+..+-|+.+.
T Consensus       149 ~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~  187 (261)
T 4h15_A          149 STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIE  187 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcC
Confidence            1246899999988888888876   47888888887653

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.73  E-value=2e-17  Score=145.59  Aligned_cols=157  Identities=11%  Similarity=0.032  Sum_probs=112.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEcccccc-------cccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEP-------LLLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~-------~~~~vD~vih~  187 (290)
                      ||+++||||+|+||.++++.|+++|++|++++|+.....+.. .+. ...++..++.+-.+.       .+.++|+||||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            468999999999999999999999999999998654332221 111 122333332221111       23579999999


Q ss_pred             ccCC-CCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhH
Q 022900          188 ACPA-SPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYF  257 (290)
Q Consensus       188 Ag~~-~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k  257 (290)
                      ||.. ....    ..+++++++++|+.|+.++++++.    +.+ .+||++||...+...          ....+|+.+|
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~~sK  149 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----------KELSTYTSAR  149 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------TTCHHHHHHH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC----------CCchHHHHHH
Confidence            9975 2222    123457789999999999999874    333 599999998765321          1235799999


Q ss_pred             HHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          258 FSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       258 ~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+.+.+.+.+..++   |+.+++++|+.+
T Consensus       150 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v  178 (254)
T 1zmt_A          150 AGACTLANALSKELGEYNIPVFAIGPNYL  178 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence            99999888888764   899999999988

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.73  E-value=3.7e-17  Score=146.54  Aligned_cols=146  Identities=14%  Similarity=0.073  Sum_probs=110.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag  189 (290)
                      +|+|+||||+|+||++++++|+++| ++|++++|+.......  .+ ....++++.+|+.++.     +.++|+|||||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~--~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK--EL-RLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHH--HH-HHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHH--HH-HHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            5789999999999999999999998 9999999975432111  11 1246888999998763     567999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ....        ...+.|+.++.+++++|++.+. +||++|+.++|+....        .+..+|...|...|.+++   
T Consensus        82 ~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~--------~~~~~y~~sK~~~e~~~~---  142 (299)
T 2wm3_A           82 YWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG--------RLAAAHFDGKGEVEEYFR---  142 (299)
T ss_dssp             HHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT--------SCCCHHHHHHHHHHHHHH---
T ss_pred             CCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC--------cccCchhhHHHHHHHHHH---
Confidence            4211        0135788999999999999885 9999888888863221        134678888887776554   


Q ss_pred             HHhCCCeeEEEeeeee
Q 022900          269 SQFRPSRKACRFFILL  284 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr  284 (290)
                       ..|++++++|++.+.
T Consensus       143 -~~gi~~~ilrp~~~~  157 (299)
T 2wm3_A          143 -DIGVPMTSVRLPCYF  157 (299)
T ss_dssp             -HHTCCEEEEECCEEG
T ss_pred             -HCCCCEEEEeecHHh
Confidence             469999999998764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.72  E-value=3.8e-17  Score=145.03  Aligned_cols=132  Identities=12%  Similarity=0.112  Sum_probs=101.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACP  190 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~  190 (290)
                      +|+||||+||||++++++|+++  |++|++++|+.....+ +.    ..+++++.+|+.++.     +.++|+||||||.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LA----AQGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hh----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            4899999999999999999999  9999999986543322 11    236788999998753     5679999999985


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      .        +    +.|+.++.+++++|++.+. +||++||.++|.             ...+|+.+|...|.+++    
T Consensus        76 ~--------~----~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~----  126 (286)
T 2zcu_A           76 E--------V----GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLA----  126 (286)
T ss_dssp             ------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHH----
T ss_pred             C--------c----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHH----
Confidence            2        1    2588999999999998885 999999998872             12479999988877664    


Q ss_pred             HhCCCeeEEEeeee
Q 022900          270 QFRPSRKACRFFIL  283 (290)
Q Consensus       270 ~~gl~~~ilR~~~l  283 (290)
                      +.+++++++|++.+
T Consensus       127 ~~~~~~~ilrp~~~  140 (286)
T 2zcu_A          127 DSGIVYTLLRNGWY  140 (286)
T ss_dssp             HHCSEEEEEEECCB
T ss_pred             HcCCCeEEEeChHH
Confidence            36999999999653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.71  E-value=1.5e-16  Score=140.49  Aligned_cols=161  Identities=15%  Similarity=0.013  Sum_probs=120.1

Q ss_pred             CCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc--cCCCCeEEEEccccccc-----------
Q 022900          113 KRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~-----------  177 (290)
                      ++++|+++||||+|  +||.++++.|+++|++|++++|+....++....+  ....++.++.+|++++.           
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999876  9999999999999999999999754433322222  24457899999998763           


Q ss_pred             -ccCCCEEEEcccCCCCCCC-----C---CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccc-cCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHY-----K---FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVY-GDPLQHPQKE  244 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~-----~---~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vy-g~~~~~~~~E  244 (290)
                       ++++|++|||||.......     +   +++..++++|+.++..+.+++....   .+||++||.+.. +.+       
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~-------  155 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ-------  155 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT-------
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc-------
Confidence             4579999999997532221     1   2245578999999999998876543   389999997643 211       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                          ...+|+.+|.+...+.+.++.+   +|+.+..+-|+.+.
T Consensus       156 ----~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~  194 (256)
T 4fs3_A          156 ----NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIR  194 (256)
T ss_dssp             ----TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             ----cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCC
Confidence                1247999999988888888876   47888888887654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.71  E-value=1.6e-16  Score=141.57  Aligned_cols=137  Identities=15%  Similarity=0.176  Sum_probs=102.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~  190 (290)
                      |+|+||||+||||+++++.|.++ |++|++++|+......    . ...+++++.+|+.++.     +.++|+|||||+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----D-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----G-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----h-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            47999999999999999999998 9999999986432221    1 2357899999998763     5689999999986


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      ...          ...|+.++.+++++|++.+. +||++||.   +...           ..||...++.  ..++.+.+
T Consensus        76 ~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~---~~~~-----------~~~~~~~~~~--~~~e~~~~  129 (289)
T 3e48_A           76 IHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYY---ADQH-----------NNPFHMSPYF--GYASRLLS  129 (289)
T ss_dssp             CCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEES---CCST-----------TCCSTTHHHH--HHHHHHHH
T ss_pred             Ccc----------chhhHHHHHHHHHHHHHcCCCEEEEEccc---CCCC-----------CCCCccchhH--HHHHHHHH
Confidence            422          13589999999999999985 99999993   3211           1233333322  13445556


Q ss_pred             HhCCCeeEEEeeeee
Q 022900          270 QFRPSRKACRFFILL  284 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr  284 (290)
                      +.|++++++|++.+.
T Consensus       130 ~~g~~~~ilrp~~~~  144 (289)
T 3e48_A          130 TSGIDYTYVRMAMYM  144 (289)
T ss_dssp             HHCCEEEEEEECEES
T ss_pred             HcCCCEEEEeccccc
Confidence            779999999999764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.70  E-value=1.1e-16  Score=145.94  Aligned_cols=158  Identities=13%  Similarity=0.043  Sum_probs=113.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-----CCchhh----hhcccCCCCeEEEEccccccc------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-----TGRKEN----VMHHFGNPNFELIRHDVVEPL------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-----~~~~~~----~~~~~~~~~v~~~~~D~~~~~------  177 (290)
                      .+++|+++||||+|+||.++++.|+++|++|+++++..     .+..+.    ..++..... . ..+|+.+..      
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~-~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-K-AVANYDSVEAGEKLV   83 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-E-EEEECCCGGGHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-e-EEEeCCCHHHHHHHH
Confidence            36789999999999999999999999999999987632     111111    111111111 1 234665442      


Q ss_pred             ------ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCc-cccCCCCCC
Q 022900          178 ------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSE-VYGDPLQHP  241 (290)
Q Consensus       178 ------~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~-vyg~~~~~~  241 (290)
                            +.++|+||||||......    ..++++.++++|+.|++++++++.    +.+ .+||++||.+ .|+..    
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~----  159 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----  159 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC----
Confidence                  347999999999764432    223467789999999999999873    344 4999999974 46532    


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          242 QKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       242 ~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                             ...+|+.+|.+.+.+.+.+..+   +|+.+..++|+.+
T Consensus       160 -------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          160 -------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence                   2357999999999988888876   4889999999865

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.69  E-value=7.5e-17  Score=147.66  Aligned_cols=145  Identities=12%  Similarity=0.092  Sum_probs=105.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhc--ccCCCCeEEEEccccccc-----cc--CCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL-----LL--EVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~v~~~~~D~~~~~-----~~--~vD~v  184 (290)
                      +.+|+|+|||||||||++|++.|+++|++|++++|+.....+....  .+...+++++.+|+.+..     +.  ++|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            3457899999999999999999999999999999975333332221  112467899999998763     45  89999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFS  261 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e  261 (290)
                      ||+||.               .|+.++.+++++|++.+ . +||+ |   +||..    .+|.. ..+..+|+..|+..|
T Consensus        88 i~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~~~~~p~~~y~~sK~~~e  144 (346)
T 3i6i_A           88 VSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRADPVEPGLNMYREKRRVR  144 (346)
T ss_dssp             EECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTCCCCTTHHHHHHHHHHHH
T ss_pred             EECCch---------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCccCcCCCcchHHHHHHHHH
Confidence            999985               38889999999999988 6 6664 3   46532    23332 234457777777665


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeec
Q 022900          262 LIFLVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      .++    ++.|++++++|++++-.
T Consensus       145 ~~l----~~~g~~~tivrpg~~~g  164 (346)
T 3i6i_A          145 QLV----EESGIPFTYICCNSIAS  164 (346)
T ss_dssp             HHH----HHTTCCBEEEECCEESS
T ss_pred             HHH----HHcCCCEEEEEeccccc
Confidence            544    44799999999876643

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.68  E-value=3e-16  Score=149.66  Aligned_cols=160  Identities=14%  Similarity=-0.001  Sum_probs=120.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ...++|+++||||+|+||.++++.|+++|++|++++|+.  ..+.+........+.++.+|++++.            +.
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~--~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG--AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG--GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999999998742  2222222222234678999998763            23


Q ss_pred             C-CCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccc-cCCCCCCCCCCCCC
Q 022900          180 E-VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVY-GDPLQHPQKETYWG  248 (290)
Q Consensus       180 ~-vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vy-g~~~~~~~~E~~~~  248 (290)
                      + +|+||||||+......    .++++.++++|+.|+.++.+++...    + .+||++||.+.+ |..           
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------  355 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------  355 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------
Confidence            4 9999999998654332    2345678999999999999998765    3 389999998654 422           


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....|+.+|...+.+++.+..+   .|+.++.+.|+.+.
T Consensus       356 g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~  394 (454)
T 3u0b_A          356 GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIE  394 (454)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCccc
Confidence            1247999999888888887765   48999999988764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.68  E-value=5.2e-16  Score=143.11  Aligned_cols=139  Identities=17%  Similarity=0.164  Sum_probs=106.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcc-ccccc-----ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD-VVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~-----~~~vD~vih~Ag  189 (290)
                      +|+|+||||+||||++++++|+++|++|++++|+......  ..+....+++++.+| +.++.     +.++|+||||++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            5789999999999999999999999999999986543211  111123468899999 87653     567999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCc--cccCCCCCCCCCCCCCCCChhhhhHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE--VYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~--vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~  265 (290)
                      ...     .      +.|..+ .+++++|++.+ + +||++||.+  .|+.           .+..+|..+|...|.+++
T Consensus        83 ~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~~~E~~~~  139 (352)
T 1xgk_A           83 SQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKFTVENYVR  139 (352)
T ss_dssp             STT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHHHHHHHHH
T ss_pred             CCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHHHHHHHHH
Confidence            421     1      247777 99999999988 5 999999985  4432           133678899988777665


Q ss_pred             HHHHHhCCCeeEEEeeee
Q 022900          266 VFISQFRPSRKACRFFIL  283 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~l  283 (290)
                      .    .+++++++|++..
T Consensus       140 ~----~gi~~~ivrpg~~  153 (352)
T 1xgk_A          140 Q----LGLPSTFVYAGIY  153 (352)
T ss_dssp             T----SSSCEEEEEECEE
T ss_pred             H----cCCCEEEEeccee
Confidence            4    5999999998753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.65  E-value=5.7e-16  Score=139.26  Aligned_cols=146  Identities=16%  Similarity=0.173  Sum_probs=102.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhc--ccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMH--HFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~--~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      +|+|+||||||+||++++++|+++|++|++++|+.... .+....  .+...+++++.+|+.++.     +.++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            56899999999999999999999999999999975332 221111  112357889999998753     5689999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCCCCCCCCCC-CChhhhhHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGN-VNPIGTYFFSFSLIF  264 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~~~E~~~~~-~~py~~~k~~~e~~~  264 (290)
                      |+.....           .|+.++.+++++|++.+ + +||+    ++||.....+  +....+ ...| ..|...|.++
T Consensus        84 a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~----S~~g~~~~~~--~~~~~p~~~~y-~sK~~~e~~~  145 (313)
T 1qyd_A           84 LAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP----SEFGMDPDIM--EHALQPGSITF-IDKRKVRRAI  145 (313)
T ss_dssp             CCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC----SCCSSCTTSC--CCCCSSTTHHH-HHHHHHHHHH
T ss_pred             Cccccch-----------hhHHHHHHHHHHHHhcCCCceEEe----cCCcCCcccc--ccCCCCCcchH-HHHHHHHHHH
Confidence            9964321           26788999999999998 6 7874    3566432221  111122 2345 6666555543


Q ss_pred             HHHHHHhCCCeeEEEeeee
Q 022900          265 LVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~l  283 (290)
                          ++.+++++++|++.+
T Consensus       146 ----~~~g~~~~ilrp~~~  160 (313)
T 1qyd_A          146 ----EAASIPYTYVSSNMF  160 (313)
T ss_dssp             ----HHTTCCBCEEECCEE
T ss_pred             ----HhcCCCeEEEEecee
Confidence                467999999998765

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.64  E-value=2.6e-16  Score=143.80  Aligned_cols=168  Identities=13%  Similarity=0.016  Sum_probs=115.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCC-C-chhhhhcccCC-CCe--EEEEcccccccccCCCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFT-G-RKENVMHHFGN-PNF--ELIRHDVVEPLLLEVDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~-~-~~~~~~~~~~~-~~v--~~~~~D~~~~~~~~vD~  183 (290)
                      .++|+||||+||||++++..|+++|+       +|+++|+... . ......++... ..+  ++...+-..+.+.++|+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~   83 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCE
Confidence            36899999999999999999999986       8999987421 0 01111111110 011  22222223345678999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcCCc-cccCCCCCCCCCC-CCCCCChhhhhHH
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTSTSE-VYGDPLQHPQKET-YWGNVNPIGTYFF  258 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS~~-vyg~~~~~~~~E~-~~~~~~py~~~k~  258 (290)
                      |||+||.....  ..++.+.+++|+.++.+++++|++.+ .  +++++|+.. +....   ...+. ...+.++|+.+|.
T Consensus        84 Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~---~~~~~~~~~p~~~yg~tkl  158 (327)
T 1y7t_A           84 ALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALI---AYKNAPGLNPRNFTAMTRL  158 (327)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH---HHHTCTTSCGGGEEECCHH
T ss_pred             EEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHH---HHHHcCCCChhheeccchH
Confidence            99999975422  45678899999999999999999874 3  777777643 11100   00111 1235578999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      ..|++...+.+.+|++.+++|++++.+..|
T Consensus       159 ~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          159 DHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             HHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            999999999999999999999998776543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.63  E-value=3.6e-15  Score=133.90  Aligned_cols=162  Identities=12%  Similarity=-0.028  Sum_probs=110.6

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCC----------CCchhhhhcccCCC---CeEEEEcc------
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFF----------TGRKENVMHHFGNP---NFELIRHD------  172 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~---~v~~~~~D------  172 (290)
                      +++|+++||||+  |+||.++++.|+++|++|++++|+.          ....+.+.++....   .......|      
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence            578999999999  9999999999999999999997531          00111111111100   02222222      


Q ss_pred             --c----cc--------c------------cccCCCEEEEcccCCC--CCC----CCCChHHHHHHHHHHHHHHHHHHHH
Q 022900          173 --V----VE--------P------------LLLEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAKR  220 (290)
Q Consensus       173 --~----~~--------~------------~~~~vD~vih~Ag~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~  220 (290)
                        +    ++        +            .+.++|+||||||...  ...    ..+++++++++|+.|++++++++.+
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  165 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence              2    11        1            1246999999999642  111    2234677899999999999999976


Q ss_pred             cC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH----hCCCeeEEEeeeee
Q 022900          221 VG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ----FRPSRKACRFFILL  284 (290)
Q Consensus       221 ~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~----~gl~~~ilR~~~lr  284 (290)
                      ..   .+||++||.+.+....         ....+|+.+|.+.+.+.+.++.+    +|+.+..++|+.+.
T Consensus       166 ~m~~~g~iv~isS~~~~~~~~---------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~  227 (297)
T 1d7o_A          166 IMNPGGASISLTYIASERIIP---------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             GEEEEEEEEEEECGGGTSCCT---------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HhccCceEEEEeccccccCCC---------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccc
Confidence            42   4899999986543111         01137999999998888887754    58999999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.63  E-value=1.8e-15  Score=145.39  Aligned_cols=159  Identities=18%  Similarity=0.158  Sum_probs=118.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCCCCc---hhhhhccc-CCCCeEEEEcccccccc----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGR---KENVMHHF-GNPNFELIRHDVVEPLL----------  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~---~~~~~~~~-~~~~v~~~~~D~~~~~~----------  178 (290)
                      ..+++|+||||+|+||.++++.|+++|++ |++++|+....   .+...++. ...++.++.+|++++..          
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            46789999999999999999999999995 99999864321   11112121 24578999999987631          


Q ss_pred             -cCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCc-cccCCCCCCCCCCCCCCCC
Q 022900          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       179 -~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~-vyg~~~~~~~~E~~~~~~~  251 (290)
                       ..+|+||||||......    ..++...++++|+.|+.++++++.+.+. +||++||.+ ++|...           ..
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g-----------~~  372 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG-----------LG  372 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-----------CT
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC-----------CH
Confidence             24799999999754332    1223566889999999999999988764 999999975 455432           14


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      .|+..|...+.+.+.+.. .|+++++++++.+.
T Consensus       373 ~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~  404 (486)
T 2fr1_A          373 GYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWA  404 (486)
T ss_dssp             TTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeC
Confidence            688888888777766554 59999999998764

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.63  E-value=2.2e-15  Score=145.58  Aligned_cols=158  Identities=15%  Similarity=0.123  Sum_probs=119.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc---hhhhhccc-CCCCeEEEEcccccccc-------cCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR---KENVMHHF-GNPNFELIRHDVVEPLL-------LEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~---~~~~~~~~-~~~~v~~~~~D~~~~~~-------~~v  181 (290)
                      ..+++|+||||+|+||.++++.|+++|+ +|++++|+....   .+...++. ...++.++.+|+++...       .++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            4578999999999999999999999999 688888864221   22222222 23578999999988742       359


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEcCCc-cccCCCCCCCCCCCCCCCChhh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV-G-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~-~-~riV~vSS~~-vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |+||||||........    ++.+.++++|+.|+.++.+++... + .+||++||.+ +||...           ...|+
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g-----------~~~Ya  405 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG-----------QGAYA  405 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT-----------BHHHH
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC-----------CHHHH
Confidence            9999999976443221    234668899999999999998765 4 4899999974 566432           24799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      ..|...+.+++.+. ..|+++++++++.+
T Consensus       406 aaKa~ld~la~~~~-~~gi~v~sv~pG~~  433 (511)
T 2z5l_A          406 AANAALDALAERRR-AAGLPATSVAWGLW  433 (511)
T ss_dssp             HHHHHHHHHHHHHH-TTTCCCEEEEECCB
T ss_pred             HHHHHHHHHHHHHH-HcCCcEEEEECCcc
Confidence            99998888887664 56999999999876

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.62  E-value=1.2e-15  Score=150.63  Aligned_cols=162  Identities=15%  Similarity=0.020  Sum_probs=107.5

Q ss_pred             CCCCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC---------CCCCchhhhhccc-CCCCeEEEEcccccc
Q 022900          107 KIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN---------FFTGRKENVMHHF-GNPNFELIRHDVVEP  176 (290)
Q Consensus       107 ~~p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~-~~~~v~~~~~D~~~~  176 (290)
                      +.++...+++|+++||||+|+||.++++.|+++|++|++++|         +.....+...++. ....+.   +|+.+.
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~D~~d~   86 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV---ADYNSV   86 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEE---ECCCCG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEE---EEeCCH
Confidence            344446688999999999999999999999999999999987         2222222222221 122222   455443


Q ss_pred             ------------cccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCcc-c
Q 022900          177 ------------LLLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEV-Y  234 (290)
Q Consensus       177 ------------~~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~v-y  234 (290)
                                  .+.++|+||||||.......    .++++.++++|+.|++++++++    ++.+ .+||++||.+. +
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~  166 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY  166 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence                        23469999999998644332    2346778999999999999987    3444 39999999764 4


Q ss_pred             cCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeee
Q 022900          235 GDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFI  282 (290)
Q Consensus       235 g~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~  282 (290)
                      +..           ....|+.+|.+.+.+++.++.++   |+.+..+.|+.
T Consensus       167 ~~~-----------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~  206 (613)
T 3oml_A          167 GNF-----------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTA  206 (613)
T ss_dssp             CCT-----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-
T ss_pred             CCC-----------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCC
Confidence            432           22479999999998888888764   78888888865

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.59  E-value=4.6e-15  Score=132.93  Aligned_cols=141  Identities=14%  Similarity=0.132  Sum_probs=97.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCc-h-hhhhc--ccCCCCeEEEEccccccc-----ccCCCEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGR-K-ENVMH--HFGNPNFELIRHDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~-~-~~~~~--~~~~~~v~~~~~D~~~~~-----~~~vD~vi  185 (290)
                      +|+|+||||+|+||++++++|+++|++|++++|+. ... . +....  .+....++++.+|+.++.     +.++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999974 111 1 11111  112346889999998763     46799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCCCCCCC-CCC-CChhhhhHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETY-WGN-VNPIGTYFFSFS  261 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~~~E~~-~~~-~~py~~~k~~~e  261 (290)
                      |||+...               +.++.+++++|++.+ + +||+    ++||...    +|.. ..+ ..+| .+|...|
T Consensus        82 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~----S~~g~~~----~~~~~~~p~~~~y-~sK~~~e  137 (307)
T 2gas_A           82 CAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP----SEFGLDV----DRHDAVEPVRQVF-EEKASIR  137 (307)
T ss_dssp             ECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC----SCCSSCT----TSCCCCTTHHHHH-HHHHHHH
T ss_pred             ECCcccc---------------cccHHHHHHHHHhcCCceEEee----cccccCc----ccccCCCcchhHH-HHHHHHH
Confidence            9998532               456789999999987 5 7773    2466322    1211 111 1245 5565544


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeee
Q 022900          262 LIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      .    +.+..+++++++|++.+.
T Consensus       138 ~----~~~~~~i~~~~lrp~~~~  156 (307)
T 2gas_A          138 R----VIEAEGVPYTYLCCHAFT  156 (307)
T ss_dssp             H----HHHHHTCCBEEEECCEET
T ss_pred             H----HHHHcCCCeEEEEcceee
Confidence            4    445679999999997653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.59  E-value=1.3e-14  Score=139.68  Aligned_cols=157  Identities=13%  Similarity=0.095  Sum_probs=117.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCC---chhhhhccc-CCCCeEEEEcccccccc-----------c
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG---RKENVMHHF-GNPNFELIRHDVVEPLL-----------L  179 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~---~~~~~~~~~-~~~~v~~~~~D~~~~~~-----------~  179 (290)
                      +++++||||+|+||.++++.|+++|+ +|++++|+...   ..+...++. ...++.++.+|++++..           .
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            48999999999999999999999999 78888885321   122222221 24579999999987631           2


Q ss_pred             CCCEEEEcccCC-CCCCC-C---CChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCc-cccCCCCCCCCCCCCCCCCh
Q 022900          180 EVDQIYHLACPA-SPVHY-K---FNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       180 ~vD~vih~Ag~~-~~~~~-~---~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~-vyg~~~~~~~~E~~~~~~~p  252 (290)
                      ++|+||||||+. ..... +   ++++.++++|+.|+.++.+++.+.+. +||++||.+ ++|...           ...
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g-----------~~~  387 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG-----------QPG  387 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT-----------CHH
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC-----------cHH
Confidence            589999999975 22221 2   23467899999999999999988774 899999975 455321           246


Q ss_pred             hhhhHHHHHHHHHHHHHHhCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      |+..|...+.+.+.+. ..|++++.+.++...
T Consensus       388 YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~  418 (496)
T 3mje_A          388 YAAANAYLDALAEHRR-SLGLTASSVAWGTWG  418 (496)
T ss_dssp             HHHHHHHHHHHHHHHH-HTTCCCEEEEECEES
T ss_pred             HHHHHHHHHHHHHHHH-hcCCeEEEEECCccc
Confidence            9999988888777655 469999999998653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.58  E-value=8.1e-15  Score=132.92  Aligned_cols=162  Identities=11%  Similarity=-0.031  Sum_probs=110.2

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCCC----------CchhhhhcccCCC---CeEEEEc-------
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFT----------GRKENVMHHFGNP---NFELIRH-------  171 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~---~v~~~~~-------  171 (290)
                      +++|+++||||  +|+||.++++.|+++|++|++++|+..          ...+...++....   .+.++.+       
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            57899999999  899999999999999999999986320          0001111111111   0223332       


Q ss_pred             -----cccc--------c------------cccCCCEEEEcccCCC--CCC----CCCChHHHHHHHHHHHHHHHHHHHH
Q 022900          172 -----DVVE--------P------------LLLEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAKR  220 (290)
Q Consensus       172 -----D~~~--------~------------~~~~vD~vih~Ag~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~  220 (290)
                           |+++        +            .++++|+||||||...  ...    ..++++.++++|+.|++++++++.+
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                 2332        1            1246999999999642  111    1234567899999999999999876


Q ss_pred             cC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH----hCCCeeEEEeeeee
Q 022900          221 VG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ----FRPSRKACRFFILL  284 (290)
Q Consensus       221 ~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~----~gl~~~ilR~~~lr  284 (290)
                      ..   .+||++||.+.+....         ....+|+.+|.+.+.+.+.++.+    +|+.+..+.|+.+.
T Consensus       167 ~m~~~g~Iv~isS~~~~~~~~---------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  228 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERVVP---------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK  228 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSCCT---------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred             HHhcCCEEEEEecccccccCC---------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence            42   4899999987543111         11137999999988888877754    58999999998764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.58  E-value=6.2e-15  Score=132.12  Aligned_cols=140  Identities=15%  Similarity=0.215  Sum_probs=97.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc--hhhhh--cccCCCCeEEEEccccccc-----ccCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--KENVM--HHFGNPNFELIRHDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~--~~~~~~~v~~~~~D~~~~~-----~~~vD~vih  186 (290)
                      +|+|+||||+|+||+++++.|+++|++|++++|+....  .+...  ..+...+++++.+|+.++.     +.++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            57899999999999999999999999999999975432  22111  1112457899999998763     457999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCCCCCCC-CCC-CChhhhhHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETY-WGN-VNPIGTYFFSFSL  262 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~~~E~~-~~~-~~py~~~k~~~e~  262 (290)
                      +|+..               ++.++.+++++|++.+ . +||+ |   +||...    .|.. ..+ ..+| ..|...|.
T Consensus        84 ~a~~~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~sK~~~e~  139 (308)
T 1qyc_A           84 TVGSL---------------QIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEPAKSVF-EVKAKVRR  139 (308)
T ss_dssp             CCCGG---------------GSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHH-HHHHHHHH
T ss_pred             CCcch---------------hhhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCcchhHH-HHHHHHHH
Confidence            99852               1456789999999987 5 7763 3   365322    1211 111 1235 55554444


Q ss_pred             HHHHHHHHhCCCeeEEEeeee
Q 022900          263 IFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~l  283 (290)
                          +.++.+++++++|++.+
T Consensus       140 ----~~~~~~~~~~~~r~~~~  156 (308)
T 1qyc_A          140 ----AIEAEGIPYTYVSSNCF  156 (308)
T ss_dssp             ----HHHHHTCCBEEEECCEE
T ss_pred             ----HHHhcCCCeEEEEecee
Confidence                44557999999999765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.57  E-value=7.3e-15  Score=133.36  Aligned_cols=162  Identities=12%  Similarity=-0.042  Sum_probs=98.2

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCeEEEEeCCC-----------CCchh-----------hhhcccCCC----C
Q 022900          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFF-----------TGRKE-----------NVMHHFGNP----N  165 (290)
Q Consensus       114 ~~~k~VlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~-----------~~~~~-----------~~~~~~~~~----~  165 (290)
                      +++|+++||||  +|+||.++++.|+++|++|++++|+.           ....+           ...++....    .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            56889999999  89999999999999999999998631           00000           000000000    0


Q ss_pred             eEEEEcc------------ccc--------c------------cccCCCEEEEcccCCC--CCC----CCCChHHHHHHH
Q 022900          166 FELIRHD------------VVE--------P------------LLLEVDQIYHLACPAS--PVH----YKFNPVKTIKTN  207 (290)
Q Consensus       166 v~~~~~D------------~~~--------~------------~~~~vD~vih~Ag~~~--~~~----~~~~~~~~~~~N  207 (290)
                      ..++..|            +++        +            .+.++|+||||||...  ...    ..++++.++++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            2333333            222        1            1246999999999642  111    123456789999


Q ss_pred             HHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH----hCCCeeEEEe
Q 022900          208 VVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ----FRPSRKACRF  280 (290)
Q Consensus       208 v~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~----~gl~~~ilR~  280 (290)
                      +.|++++++++.+..   .+||++||.+.+....         ....+|+.+|.+.+.+.+.++.+    +|+.+..+.|
T Consensus       167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~---------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP---------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhcCceEEEEeccccccccC---------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            999999999987652   4899999986542110         01136999999888888777654    5899999999


Q ss_pred             eeee
Q 022900          281 FILL  284 (290)
Q Consensus       281 ~~lr  284 (290)
                      +.+.
T Consensus       238 G~v~  241 (319)
T 2ptg_A          238 GPLK  241 (319)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            8764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.57  E-value=9.9e-15  Score=141.49  Aligned_cols=158  Identities=11%  Similarity=0.080  Sum_probs=113.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEE-eCCCC-------------Cchhhhhccc-CCCCeEEEEccccccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVV-DNFFT-------------GRKENVMHHF-GNPNFELIRHDVVEPL  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~-~r~~~-------------~~~~~~~~~~-~~~~v~~~~~D~~~~~  177 (290)
                      .++++++||||+|+||.++++.|+++|++ |+++ +|+..             ...+...++. ...++.++.+|+++..
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            46789999999999999999999999997 5556 77632             1222222221 2457999999998763


Q ss_pred             -----------ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC-----C-eEEEEcCCcc-cc
Q 022900          178 -----------LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG-----A-RFLLTSTSEV-YG  235 (290)
Q Consensus       178 -----------~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~-----~-riV~vSS~~v-yg  235 (290)
                                 +.++|+||||||+.......    ++++.++++|+.|+.++.+++....     . +||++||.+. +|
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence                       24589999999976443322    2356689999999999999987654     3 8999999764 44


Q ss_pred             CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          236 DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       236 ~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      ...           ...|+..|...+.+.+.+. ..|++++.+.++.+
T Consensus       409 ~~g-----------~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~  444 (525)
T 3qp9_A          409 GAG-----------QGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW  444 (525)
T ss_dssp             CTT-----------CHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB
T ss_pred             CCC-----------CHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc
Confidence            221           1468888887766655443 34888888888766

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.57  E-value=3.6e-14  Score=129.55  Aligned_cols=160  Identities=7%  Similarity=-0.078  Sum_probs=111.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCC---------CCchhhhhccc----CCCCeEEEEcccccc--c
Q 022900          115 KGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFF---------TGRKENVMHHF----GNPNFELIRHDVVEP--L  177 (290)
Q Consensus       115 ~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~----~~~~v~~~~~D~~~~--~  177 (290)
                      ++|+++||||++  +||.+++++|+++|++|++.++..         ...........    ....+.++.+|+.+.  .
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            367999999875  999999999999999999776532         11111111111    123477888888655  2


Q ss_pred             ------------------------------ccCCCEEEEcccCCC--CCC----CCCChHHHHHHHHHHHHHHHHHHHHc
Q 022900          178 ------------------------------LLEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV  221 (290)
Q Consensus       178 ------------------------------~~~vD~vih~Ag~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~  221 (290)
                                                    +.++|++|||||+..  ...    ..++++.++++|+.|++++++++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                                          135999999999642  111    12345778999999999999998765


Q ss_pred             C---CeEEEEcCCccccCCCCCCCCCCCCCCCC-hhhhhHHHHHHHHHHHHHH----hCCCeeEEEeeeee
Q 022900          222 G---ARFLLTSTSEVYGDPLQHPQKETYWGNVN-PIGTYFFSFSLIFLVFISQ----FRPSRKACRFFILL  284 (290)
Q Consensus       222 ~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~-py~~~k~~~e~~~~~~~~~----~gl~~~ilR~~~lr  284 (290)
                      .   .+||++||.+.+....          ... .|+.+|.+...+.+.++.+    +|+.+..+.|+.+.
T Consensus       161 m~~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~  221 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVP----------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             HhhCCeEEEEeCccccCCCC----------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence            3   3899999976542111          112 7999999988877777654    58899999888764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.56  E-value=4e-15  Score=134.40  Aligned_cols=141  Identities=14%  Similarity=0.158  Sum_probs=97.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC-CCc-hhhhhc--ccCCCCeEEEEccccccc-----ccCCCEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGR-KENVMH--HFGNPNFELIRHDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~-~~~~~~--~~~~~~v~~~~~D~~~~~-----~~~vD~vi  185 (290)
                      ++|+|+||||+|+||++++++|+++|++|++++|+. ... .+....  .+...+++++.+|+.+..     +.++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            357899999999999999999999999999999974 211 111111  112356889999998763     56799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCCCCCCCC-CC-CChhhhhHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYW-GN-VNPIGTYFFSFS  261 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~~~E~~~-~~-~~py~~~k~~~e  261 (290)
                      |||+...               +.++.+++++|++.+ + +||+    ++||...    +|... .+ ..+| .+|...|
T Consensus        83 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~----S~~g~~~----~~~~~~~p~~~~y-~sK~~~e  138 (321)
T 3c1o_A           83 SALPFPM---------------ISSQIHIINAIKAAGNIKRFLP----SDFGCEE----DRIKPLPPFESVL-EKKRIIR  138 (321)
T ss_dssp             ECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC----SCCSSCG----GGCCCCHHHHHHH-HHHHHHH
T ss_pred             ECCCccc---------------hhhHHHHHHHHHHhCCccEEec----cccccCc----cccccCCCcchHH-HHHHHHH
Confidence            9998521               566889999999988 5 7772    3465321    22211 11 1235 5565555


Q ss_pred             HHHHHHHHHhCCCeeEEEeeee
Q 022900          262 LIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      .+    .+..+++++++|++.+
T Consensus       139 ~~----~~~~~~~~~~lrp~~~  156 (321)
T 3c1o_A          139 RA----IEAAALPYTYVSANCF  156 (321)
T ss_dssp             HH----HHHHTCCBEEEECCEE
T ss_pred             HH----HHHcCCCeEEEEecee
Confidence            44    4457999999998765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.55  E-value=2.8e-14  Score=128.83  Aligned_cols=137  Identities=16%  Similarity=0.201  Sum_probs=96.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag~  190 (290)
                      +++|+||||+|+||++++++|+++|++|++++|+.....+.+... ....++++.+|+.++.     +.++|+|||||+.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEF-QSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHH-HHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHh-hcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            358999999999999999999999999999999754222222111 2246889999998753     5689999999985


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcCCccccCCCCCCCCCCCCCCCC----hhhhhHHHHHHHH
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVN----PIGTYFFSFSLIF  264 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~-riV~vSS~~vyg~~~~~~~~E~~~~~~~----py~~~k~~~e~~~  264 (290)
                      .               ++.++.+++++|++.+ + +||+ |   +||...    .|..  +..    +| ..|...|   
T Consensus        90 ~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~--~~~p~~~~y-~sK~~~e---  140 (318)
T 2r6j_A           90 P---------------QILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRIN--ALPPFEALI-ERKRMIR---  140 (318)
T ss_dssp             G---------------GSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCC--CCHHHHHHH-HHHHHHH---
T ss_pred             h---------------hhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----cccc--CCCCcchhH-HHHHHHH---
Confidence            2               1456789999999987 5 7764 3   466322    1211  222    34 5555444   


Q ss_pred             HHHHHHhCCCeeEEEeeee
Q 022900          265 LVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~l  283 (290)
                       .+.++.+++++++|++.+
T Consensus       141 -~~~~~~~~~~~~lr~~~~  158 (318)
T 2r6j_A          141 -RAIEEANIPYTYVSANCF  158 (318)
T ss_dssp             -HHHHHTTCCBEEEECCEE
T ss_pred             -HHHHhcCCCeEEEEccee
Confidence             444567999999999654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.52  E-value=7.3e-14  Score=137.55  Aligned_cols=156  Identities=15%  Similarity=0.069  Sum_probs=114.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccc-ccc---------cccCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDV-VEP---------LLLEV  181 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~-~~~---------~~~~v  181 (290)
                      .+++|+++||||+++||.++++.|+++|++|++.++.  ...+...++. ...++..+.+|+ .+.         .++++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999998863  2222222221 234577778888 332         24579


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                      |++|||||+......    .++++.++++|+.|++++++++.    +.+ .+||++||.+- ++...           ..
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~-----------~~  465 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG-----------QA  465 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT-----------BH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC-----------Ch
Confidence            999999997643332    23467799999999999998864    333 39999999754 44221           14


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                      .|+.+|.+...+.+.++.+   +|+.+..+-|+
T Consensus       466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG  498 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH  498 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence            7999999988888888765   47888888776

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.48  E-value=1.9e-13  Score=134.56  Aligned_cols=157  Identities=15%  Similarity=0.039  Sum_probs=107.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC---------Cchhhhhccc-CCCCeEEEEccccc--------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT---------GRKENVMHHF-GNPNFELIRHDVVE--------  175 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~-~~~~v~~~~~D~~~--------  175 (290)
                      +++|+++||||+++||+++++.|+++|++|++.+|...         ...+...++. ...++.....|+.+        
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999987531         1111122221 12223222223321        


Q ss_pred             -ccccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCcc-ccCCCCCCCCC
Q 022900          176 -PLLLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEV-YGDPLQHPQKE  244 (290)
Q Consensus       176 -~~~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~v-yg~~~~~~~~E  244 (290)
                       +.++++|++|||||+......    .++++.++++|+.|++++++++.    +.+ .+||++||.+. ++...      
T Consensus        86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~------  159 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG------  159 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC------
Confidence             124579999999997543322    23467799999999999998863    333 49999999754 44321      


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFF  281 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~  281 (290)
                           ...|+.+|.+...+.+.++.+   +|+.+..+-|+
T Consensus       160 -----~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          160 -----QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                 136999999988888888765   47777777775

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.45  E-value=1.4e-12  Score=121.45  Aligned_cols=161  Identities=12%  Similarity=-0.013  Sum_probs=114.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeCCCCCchh-----------hhhcc--cCCCCeEEEEccccccc--
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKE-----------NVMHH--FGNPNFELIRHDVVEPL--  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~-----------~~~~~--~~~~~v~~~~~D~~~~~--  177 (290)
                      ..+|+++||||+++||.++++.|++ +|++|+++++......+           .....  ....++..+.+|++++.  
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            5689999999999999999999999 99999999886543321           11111  13457888999998763  


Q ss_pred             ----------ccCCCEEEEcccCCC---------------CC-----------------------CCCCChHHHHHHHHH
Q 022900          178 ----------LLEVDQIYHLACPAS---------------PV-----------------------HYKFNPVKTIKTNVV  209 (290)
Q Consensus       178 ----------~~~vD~vih~Ag~~~---------------~~-----------------------~~~~~~~~~~~~Nv~  209 (290)
                                ++++|++|||||...               +.                       ...++++.++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence                      457999999999631               11                       122345678899988


Q ss_pred             HHH-HHHHHHHHc-----CCeEEEEcCCccc-cCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh----CCCeeEE
Q 022900          210 GTL-NMLGLAKRV-----GARFLLTSTSEVY-GDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF----RPSRKAC  278 (290)
Q Consensus       210 gt~-~ll~a~~~~-----~~riV~vSS~~vy-g~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~----gl~~~il  278 (290)
                      +.. .+++++...     +.+||++||++.. +.+..         ....|+.+|.+.+.+.+.++.++    |+.+..+
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~---------~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaV  275 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY---------WNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVS  275 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT---------TTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc---------cchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEE
Confidence            887 666665432     2489999997543 21110         11479999999988888888764    6677777


Q ss_pred             Eeeee
Q 022900          279 RFFIL  283 (290)
Q Consensus       279 R~~~l  283 (290)
                      -|+.+
T Consensus       276 aPG~i  280 (405)
T 3zu3_A          276 VLKAV  280 (405)
T ss_dssp             ECCCC
T ss_pred             EeCCC
Confidence            77654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.43  E-value=6.4e-13  Score=142.43  Aligned_cols=160  Identities=13%  Similarity=0.084  Sum_probs=114.6

Q ss_pred             CCCCCEEEEEcCCch-HHHHHHHHHHHCCCeEEEEe-CCCCCchhhhhcc---cC--CCCeEEEEccccccc--------
Q 022900          113 KRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHH---FG--NPNFELIRHDVVEPL--------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~---~~--~~~v~~~~~D~~~~~--------  177 (290)
                      .+++|+++||||+|+ ||.++++.|+++|++|++++ |+.....+....+   ..  ..++.++.+|+++..        
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            467899999999998 99999999999999999985 4332222211111   11  357889999998762        


Q ss_pred             ---------cc-CCCEEEEcccCCCCC-CC------CCChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEcCCcc
Q 022900          178 ---------LL-EVDQIYHLACPASPV-HY------KFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSEV  233 (290)
Q Consensus       178 ---------~~-~vD~vih~Ag~~~~~-~~------~~~~~~~~~~Nv~gt~~ll~a~~~~------~-~riV~vSS~~v  233 (290)
                               ++ ++|+||||||+.... ..      .++++.++++|+.|+++++++++..      + .+||++||...
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                     23 699999999976443 21      1235778999999999999987422      1 38999999754


Q ss_pred             ccCCCCCCCCCCCCCCCChhhhhHHHHHHH-HHHHHHHhC--CCeeEEEeeeee
Q 022900          234 YGDPLQHPQKETYWGNVNPIGTYFFSFSLI-FLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       234 yg~~~~~~~~E~~~~~~~py~~~k~~~e~~-~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      +..            ....|+.+|.+.+.+ .+.+.+.++  +.++.+.|+.++
T Consensus       832 ~~g------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~  873 (1887)
T 2uv8_A          832 TFG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR  873 (1887)
T ss_dssp             CSS------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEE
T ss_pred             ccC------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence            321            124799999988887 555555444  677778887776

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.42  E-value=1.5e-12  Score=122.09  Aligned_cols=162  Identities=12%  Similarity=-0.000  Sum_probs=113.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeCCCCCchhh-----------h-hcc-cCCCCeEEEEcccccc---
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKEN-----------V-MHH-FGNPNFELIRHDVVEP---  176 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~-----------~-~~~-~~~~~v~~~~~D~~~~---  176 (290)
                      ..+|+++||||+++||.++++.|++ +|++|++++|+.....+.           . ..+ ....++..+.+|++++   
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3578999999999999999999999 999999999875443221           1 111 1245788899999876   


Q ss_pred             ---------cc-cCCCEEEEcccCC-------------C--CC-----------------------CCCCChHHHHHHHH
Q 022900          177 ---------LL-LEVDQIYHLACPA-------------S--PV-----------------------HYKFNPVKTIKTNV  208 (290)
Q Consensus       177 ---------~~-~~vD~vih~Ag~~-------------~--~~-----------------------~~~~~~~~~~~~Nv  208 (290)
                               .+ +++|++|||||..             .  +.                       ...++++.++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence                     35 6799999999862             1  11                       11223456778887


Q ss_pred             HHHH-HHHHHHHHcC-----CeEEEEcCCccc-cCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEE
Q 022900          209 VGTL-NMLGLAKRVG-----ARFLLTSTSEVY-GDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKAC  278 (290)
Q Consensus       209 ~gt~-~ll~a~~~~~-----~riV~vSS~~vy-g~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~il  278 (290)
                      .+.. .+++++...+     .+||++||++.. +.+..         ....|+.+|.+.+.+.+.++.++   |+.+..+
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~---------~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV  289 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIY---------WHGALGKAKVDLDRTAQRLNARLAKHGGGANVA  289 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHH---------TSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCc---------cchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence            7775 6777765432     389999997542 11000         01368999998888888887664   7888888


Q ss_pred             Eeeeee
Q 022900          279 RFFILL  284 (290)
Q Consensus       279 R~~~lr  284 (290)
                      -|+.+.
T Consensus       290 aPG~i~  295 (422)
T 3s8m_A          290 VLKSVV  295 (422)
T ss_dssp             EECCCC
T ss_pred             EcCCCc
Confidence            887653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.38  E-value=5.5e-13  Score=139.29  Aligned_cols=160  Identities=13%  Similarity=0.089  Sum_probs=110.2

Q ss_pred             CCCCCEEEEEcCCch-HHHHHHHHHHHCCCeEEEEe-CCCCCchhhhhccc---C--CCCeEEEEccccccc--------
Q 022900          113 KRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHHF---G--NPNFELIRHDVVEPL--------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~---~--~~~v~~~~~D~~~~~--------  177 (290)
                      .+++|+++||||+|+ ||.++++.|+++|++|++++ |+.....+...++.   .  ..++.++.+|+++..        
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            467899999999998 99999999999999999984 54433332222221   1  346889999998762        


Q ss_pred             ---------cc-CCCEEEEcccCCCCC-CCC------CChHHHHHHHHHHHHHHHHHHH--Hc----C-CeEEEEcCCcc
Q 022900          178 ---------LL-EVDQIYHLACPASPV-HYK------FNPVKTIKTNVVGTLNMLGLAK--RV----G-ARFLLTSTSEV  233 (290)
Q Consensus       178 ---------~~-~vD~vih~Ag~~~~~-~~~------~~~~~~~~~Nv~gt~~ll~a~~--~~----~-~riV~vSS~~v  233 (290)
                               +. ++|+||||||+.... ...      ++++.++++|+.|+.+++++++  ..    + .+||++||.+.
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG  632 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  632 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence                     23 699999999976443 222      2346789999999999999873  22    1 37999999754


Q ss_pred             ccCCCCCCCCCCCCCCCChhhhhHHHHHHH-HHHHHHHhC--CCeeEEEeeeee
Q 022900          234 YGDPLQHPQKETYWGNVNPIGTYFFSFSLI-FLVFISQFR--PSRKACRFFILL  284 (290)
Q Consensus       234 yg~~~~~~~~E~~~~~~~py~~~k~~~e~~-~~~~~~~~g--l~~~ilR~~~lr  284 (290)
                      +..            ....|+.+|.+.+.+ .+.+++.++  +.++.+.|+.++
T Consensus       633 ~~G------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~  674 (1688)
T 2pff_A          633 TFG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR  674 (1688)
T ss_dssp             TSS------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCC
T ss_pred             ccC------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCc
Confidence            311            124799999988776 343444333  444555555554

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.37  E-value=1.2e-12  Score=132.73  Aligned_cols=158  Identities=17%  Similarity=0.113  Sum_probs=115.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCC-eEEEEeCCC---CCchhhhhccc-CCCCeEEEEcccccccc---------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLI-ARGD-SVIVVDNFF---TGRKENVMHHF-GNPNFELIRHDVVEPLL---------  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~-~~G~-~V~~~~r~~---~~~~~~~~~~~-~~~~v~~~~~D~~~~~~---------  178 (290)
                      ..+++++||||+|+||.++++.|+ ++|+ +|++++|+.   +...+.+.++. ...++.++.+|++++..         
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            467899999999999999999999 7898 588899873   22223333322 34579999999987631         


Q ss_pred             --cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          179 --LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       179 --~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                        .++|+||||||.......    .++++.++++|+.|+.++.+++.... +||++||.+. .|....           .
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~g~-----------~  675 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSGGQ-----------G  675 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCSSC-----------H
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCCCC-----------H
Confidence              158999999997644332    23467789999999999999984333 8999999864 453211           4


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      .|+..|...+.+.+.+. ..|++++.+-++.+.
T Consensus       676 ~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~  707 (795)
T 3slk_A          676 NYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWA  707 (795)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCS
T ss_pred             HHHHHHHHHHHHHHHHH-HcCCeEEEEECCeEC
Confidence            68888865566555554 459999999887654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.37  E-value=4.4e-12  Score=135.81  Aligned_cols=160  Identities=15%  Similarity=0.107  Sum_probs=112.4

Q ss_pred             CCCCCEEEEEcCCch-HHHHHHHHHHHCCCeEEEEeCC-CCCchhhhhc---ccC--CCCeEEEEccccccc--------
Q 022900          113 KRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVDNF-FTGRKENVMH---HFG--NPNFELIRHDVVEPL--------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~-IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~---~~~--~~~v~~~~~D~~~~~--------  177 (290)
                      .+++|+++||||+|+ ||.++++.|+++|++|+++++. .....+...+   .+.  ..++.++.+|+++..        
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            467899999999999 9999999999999999998643 2222111111   111  357889999998762        


Q ss_pred             -------cc-CCCEEEEcccCCCCC-CC-C-----CChHHHHHHHHHHHHHHHHHHH--Hc----C-CeEEEEcCCcccc
Q 022900          178 -------LL-EVDQIYHLACPASPV-HY-K-----FNPVKTIKTNVVGTLNMLGLAK--RV----G-ARFLLTSTSEVYG  235 (290)
Q Consensus       178 -------~~-~vD~vih~Ag~~~~~-~~-~-----~~~~~~~~~Nv~gt~~ll~a~~--~~----~-~riV~vSS~~vyg  235 (290)
                             ++ ++|+||||||+.... .. +     ++++.++++|+.|+++++++++  ..    + .+||++||.+.+-
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                   33 699999999976443 22 1     2356789999999999988742  22    2 3899999975431


Q ss_pred             CCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH-hC--CCeeEEEeeeee
Q 022900          236 DPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ-FR--PSRKACRFFILL  284 (290)
Q Consensus       236 ~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~-~g--l~~~ilR~~~lr  284 (290)
                      .            ....|+.+|.+.+.++..+..+ ++  +.++.+.|+.++
T Consensus       809 g------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~  848 (1878)
T 2uv9_A          809 G------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR  848 (1878)
T ss_dssp             S------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred             C------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence            1            1247999999888877766544 22  666677777665

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.36  E-value=1.4e-11  Score=115.89  Aligned_cols=162  Identities=9%  Similarity=-0.123  Sum_probs=111.5

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCeEEEEeCCCCCch-----------hhhhccc--CCCCeEEEEccccccc-
Q 022900          114 RKGLRIVVTGGAGFVGSH--LVDRLIARGDSVIVVDNFFTGRK-----------ENVMHHF--GNPNFELIRHDVVEPL-  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~--la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~--~~~~v~~~~~D~~~~~-  177 (290)
                      ..+|+++||||+++||.+  +++.|+++|++|++++|+.....           +.+....  ...++..+.+|++++. 
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            568999999999999999  99999999999999998654321           2222111  3457889999998763 


Q ss_pred             -----------ccCCCEEEEcccCC-------------C--CC-----------------------CCCCChHHHHHHHH
Q 022900          178 -----------LLEVDQIYHLACPA-------------S--PV-----------------------HYKFNPVKTIKTNV  208 (290)
Q Consensus       178 -----------~~~vD~vih~Ag~~-------------~--~~-----------------------~~~~~~~~~~~~Nv  208 (290)
                                 ++++|++|||||..             .  +.                       ...++++.++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence                       35699999999963             1  11                       01223455777777


Q ss_pred             HHHH-HHHHHHHHcC-----CeEEEEcCCccc-cCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH----hCCCeeE
Q 022900          209 VGTL-NMLGLAKRVG-----ARFLLTSTSEVY-GDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ----FRPSRKA  277 (290)
Q Consensus       209 ~gt~-~ll~a~~~~~-----~riV~vSS~~vy-g~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~----~gl~~~i  277 (290)
                      .+.. .+++++...+     .+||++||.+.. +.+..         -...|+.+|.+.+.+.+.++.+    +|+.+..
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~---------~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~  288 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY---------REGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV  288 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT---------TTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc---------ccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence            7666 6666665433     379999997532 11100         1147899999988877777754    5778888


Q ss_pred             EEeeeee
Q 022900          278 CRFFILL  284 (290)
Q Consensus       278 lR~~~lr  284 (290)
                      +-|+.+.
T Consensus       289 V~PG~v~  295 (418)
T 4eue_A          289 SVNKALV  295 (418)
T ss_dssp             EECCCCC
T ss_pred             EECCcCc
Confidence            8776553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.19  E-value=7.3e-11  Score=131.60  Aligned_cols=158  Identities=16%  Similarity=0.070  Sum_probs=110.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCCCCch---hhhhccc-CCCCeEEEEccccccc-----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRK---ENVMHHF-GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~---~~~~~~~-~~~~v~~~~~D~~~~~-----------  177 (290)
                      ..+|+++||||+|+||.++++.|+++|++ |++++|+.....   +.+.++. ...++.++.+|++++.           
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            36789999999999999999999999997 777888654432   1222221 2457888999998763           


Q ss_pred             ccCCCEEEEcccCCCCCC----CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCcc-ccCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEV-YGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~v-yg~~~~~~~~E~~~~~  249 (290)
                      +..+|+||||||......    ..++++.++++|+.|+.++.+++....   .+||++||.+. .|...           
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g----------- 2030 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG----------- 2030 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT-----------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC-----------
Confidence            346999999999753322    234567789999999999988876542   38999999764 34221           


Q ss_pred             CChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQFRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~l  283 (290)
                      ...|+..|.....+++....+ |++...+.++..
T Consensus      2031 ~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2031 QANYGFANSAMERICEKRRHD-GLPGLAVQWGAI 2063 (2512)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCB
T ss_pred             cHHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCc
Confidence            136999999888877765554 998887777654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.04  E-value=1.4e-09  Score=121.98  Aligned_cols=160  Identities=12%  Similarity=0.018  Sum_probs=105.6

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHCCCeEEEEeCCCCC-----chhhhhccc-CCCCeEEEEcccccc----------
Q 022900          114 RKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVDNFFTG-----RKENVMHHF-GNPNFELIRHDVVEP----------  176 (290)
Q Consensus       114 ~~~k~VlVTGasG~-IG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~~-~~~~v~~~~~D~~~~----------  176 (290)
                      +++|+++||||+++ ||.++++.|+++|++|++++|+...     ..+...++. ...++..+.+|++++          
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            78999999999999 9999999999999999999987544     122222221 234688899999765          


Q ss_pred             ------cccCCCEEEEcccCC----CC-----CCCCCChH----HHHHHHHHHHHHHHHHHHH----cCC----eEEEEc
Q 022900          177 ------LLLEVDQIYHLACPA----SP-----VHYKFNPV----KTIKTNVVGTLNMLGLAKR----VGA----RFLLTS  229 (290)
Q Consensus       177 ------~~~~vD~vih~Ag~~----~~-----~~~~~~~~----~~~~~Nv~gt~~ll~a~~~----~~~----riV~vS  229 (290)
                            .++++|++|||||..    ..     .....+++    ..+++|+.+++.+++++..    .+.    .++...
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                  234699999999971    10     01222333    3489999999998887643    221    233322


Q ss_pred             CCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH--hC--CCeeEEEeeeee
Q 022900          230 TSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ--FR--PSRKACRFFILL  284 (290)
Q Consensus       230 S~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~--~g--l~~~ilR~~~lr  284 (290)
                      |. ..+..          .....|+.+|.+...+.+.++.+  ++  +.++.+-|+.++
T Consensus      2294 ss-~~g~~----------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~ 2341 (3089)
T 3zen_D         2294 SP-NRGMF----------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTK 2341 (3089)
T ss_dssp             CS-STTSC----------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEE
T ss_pred             Cc-ccccC----------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccC
Confidence            21 11110          01236999999999999999988  54  334444454444

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.95  E-value=6e-09  Score=95.05  Aligned_cols=159  Identities=10%  Similarity=-0.004  Sum_probs=101.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCC----CCCchhhhhcccC---CCCeEEEEcccccccccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNF----FTGRKENVMHHFG---NPNFELIRHDVVEPLLLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~v  181 (290)
                      .++|+||||+||||.+++..|+.+|.       +|.++|++    ..+......++..   ....++...+-..+.+.++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA   84 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence            46899999999999999999999885       78888874    1111111111111   1111222222234567899


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcCCc-c--ccCCCCCCCCCCCCCCCChhhh
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTSTSE-V--YGDPLQHPQKETYWGNVNPIGT  255 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~--riV~vSS~~-v--yg~~~~~~~~E~~~~~~~py~~  255 (290)
                      |+|||+||..  .....+..+.+..|+.++.++++++.+.+ .  +||++|.-. +  |-....   .+.+ .+.+.++.
T Consensus        85 D~Vi~~ag~~--~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~---~~~~-p~~~v~g~  158 (329)
T 1b8p_A           85 DVALLVGARP--RGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKS---APSL-PAKNFTAM  158 (329)
T ss_dssp             SEEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHT---CTTS-CGGGEEEC
T ss_pred             CEEEEeCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHH---cCCC-CHHHEEEe
Confidence            9999999963  33345667889999999999999998873 3  788887621 1  110000   0011 12235777


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEe
Q 022900          256 YFFSFSLIFLVFISQFRPSRKACRF  280 (290)
Q Consensus       256 ~k~~~e~~~~~~~~~~gl~~~ilR~  280 (290)
                      +.....++...+++..|++..-++.
T Consensus       159 t~Ld~~r~~~~la~~lgv~~~~v~~  183 (329)
T 1b8p_A          159 LRLDHNRALSQIAAKTGKPVSSIEK  183 (329)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEES
T ss_pred             ecHHHHHHHHHHHHHhCcCHHHceE
Confidence            7666677777788888887665553

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.89  E-value=6.4e-09  Score=94.76  Aligned_cols=113  Identities=12%  Similarity=0.030  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccC---CCCeEEEEc-ccccccccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFG---NPNFELIRH-DVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~---~~~v~~~~~-D~~~~~~~~vD~vih~A  188 (290)
                      ++++|+||||+|++|..++..|+++|  ++|+++|++..  .....++..   ..++..+.. +-..+.+.++|+|||+|
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~a   84 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA   84 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcC
Confidence            34689999999999999999999998  78999987543  212111111   112332222 11234578999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS  231 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~  231 (290)
                      |...  ....+..+++..|+.++.++++++.+.+. .+|+++|-
T Consensus        85 g~~~--~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           85 GVPR--KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCC--CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CcCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            9532  22334457789999999999999998875 67777763

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.89  E-value=7.5e-09  Score=93.74  Aligned_cols=164  Identities=10%  Similarity=0.055  Sum_probs=102.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeC--CCCCchh---hhhccc--CCCCeEEEEcc-cccccccCCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDN--FFTGRKE---NVMHHF--GNPNFELIRHD-VVEPLLLEVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r--~~~~~~~---~~~~~~--~~~~v~~~~~D-~~~~~~~~vD~vih  186 (290)
                      ++|+||||+|++|.+++..|+.+|.  ++.++|+  +..+...   .+.+..  ...++++...| -..+.+.++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            4799999999999999999999885  5777876  3211111   111111  11244555433 34667889999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCCCCCChhhh-hHHHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGT-YFFSFSLIFL  265 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~-~k~~~e~~~~  265 (290)
                      +||..  .....+..++++.|+.++.++++++++.+..+|+++|--+.-.. ..-..+..+.+...++. +.....++..
T Consensus        81 ~Ag~~--~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~~~t-~~~~k~~~~p~~rviG~gt~LD~~r~~~  157 (313)
T 1hye_A           81 TSGVP--RKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVMT-YKALVDSKFERNQVFGLGTHLDSLRFKV  157 (313)
T ss_dssp             CCSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHHHHH-HHHHHHHCCCTTSEEECTTHHHHHHHHH
T ss_pred             CCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHHHHH-HHHHHhhCcChhcEEEeCccHHHHHHHH
Confidence            99963  23344567789999999999999998876546666664221000 00001111123355776 6665666667


Q ss_pred             HHHHHhCCCeeEEEeeee
Q 022900          266 VFISQFRPSRKACRFFIL  283 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~l  283 (290)
                      .+++..|++..-++..++
T Consensus       158 ~la~~lgv~~~~v~~~v~  175 (313)
T 1hye_A          158 AIAKFFGVHIDEVRTRII  175 (313)
T ss_dssp             HHHHHHTCCGGGEECCEE
T ss_pred             HHHHHhCcCHHHeEEEEe
Confidence            777777876655554333

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.88  E-value=6.7e-09  Score=79.23  Aligned_cols=92  Identities=21%  Similarity=0.134  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~A  188 (290)
                      .+++|+|+|+ |++|.++++.|.++| ++|++++|+..    ...... ...+.++..|+.+.     .+.++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~----~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLA----ALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHH----HHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHH----HHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4578999999 999999999999999 89999988532    222221 34567788888764     346899999998


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS  230 (290)
                      +..                  ....++++|.+.+++++.+++
T Consensus        78 ~~~------------------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           78 PFF------------------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             CGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred             Cch------------------hhHHHHHHHHHhCCCEEEecC
Confidence            631                  135778889998886655544

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.87  E-value=1e-08  Score=92.41  Aligned_cols=111  Identities=15%  Similarity=0.049  Sum_probs=78.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeC--CCCCchh---hhhccc-CCCCeEEEEcccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDN--FFTGRKE---NVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r--~~~~~~~---~~~~~~-~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ++|+||||+|++|.+++..|+.+|.  ++.++|+  ...+.+.   .+.+.. ....+.+...|  .+.+.++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~--~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC--HHHhCCCCEEEEcC
Confidence            4799999999999999999999876  6777876  3211111   111111 12344444433  66788999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS  231 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~  231 (290)
                      |..  ........+.+..|+.++.++++++.+.+. .+|+++|-
T Consensus        79 g~~--~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           79 GIP--RQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             CCC--CCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            953  223345567899999999999999999875 67777664

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.63  E-value=1.3e-08  Score=90.89  Aligned_cols=77  Identities=14%  Similarity=0.176  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~A  188 (290)
                      .++|+++||||+|++|++++..|+++|++|++++|+.++..+.........++.++.+|++++     .+.++|+|||||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            567899999999999999999999999999999986433222222211112345566777653     345799999999


Q ss_pred             cC
Q 022900          189 CP  190 (290)
Q Consensus       189 g~  190 (290)
                      +.
T Consensus       197 g~  198 (287)
T 1lu9_A          197 AI  198 (287)
T ss_dssp             CT
T ss_pred             Cc
Confidence            85

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.55  E-value=2.1e-07  Score=80.41  Aligned_cols=71  Identities=18%  Similarity=0.343  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc--
Q 022900          115 KGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--  176 (290)
Q Consensus       115 ~~k~VlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~--  176 (290)
                      .||+|+||||                ||++|.++++.|+++|++|+++.|.......      ....+++++.+-.++  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------~~~~~~~~~v~s~~em~   75 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------PHPNLSIREITNTKDLL   75 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------CCTTEEEEECCSHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------CCCCeEEEEHhHHHHHH
Confidence            4789999999                9999999999999999999999986422110      123566666554332  


Q ss_pred             -----cccCCCEEEEcccCC
Q 022900          177 -----LLLEVDQIYHLACPA  191 (290)
Q Consensus       177 -----~~~~vD~vih~Ag~~  191 (290)
                           .+.++|++|||||+.
T Consensus        76 ~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           76 IEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHhcCCCCEEEEcCccc
Confidence                 346799999999975

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.51  E-value=4e-07  Score=78.48  Aligned_cols=70  Identities=20%  Similarity=0.198  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc--
Q 022900          114 RKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE--  175 (290)
Q Consensus       114 ~~~k~VlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~--  175 (290)
                      +.+|+|+||||                ||+||.++++.|+++|++|+++++.....      .  ...++.++..-.+  
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~------~--~~g~~~~dv~~~~~~   77 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------T--PPFVKRVDVMTALEM   77 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------C--CTTEEEEECCSHHHH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc------c--CCCCeEEccCcHHHH
Confidence            67899999999                69999999999999999999998753111      0  1134443332211  


Q ss_pred             -----ccccCCCEEEEcccCC
Q 022900          176 -----PLLLEVDQIYHLACPA  191 (290)
Q Consensus       176 -----~~~~~vD~vih~Ag~~  191 (290)
                           ..+.++|++|||||+.
T Consensus        78 ~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           78 EAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHHhcCCCCEEEECCccc
Confidence                 1345799999999975

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.45  E-value=1.1e-06  Score=79.54  Aligned_cols=110  Identities=12%  Similarity=0.022  Sum_probs=76.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhccc---CCCCeEEEEc-ccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHF---GNPNFELIRH-DVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~-D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.|+||+|++|..++..|+.+|  .+|.++|++.  .+....++.   ...++....+ +-.++.+.++|+||++||.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~   78 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence            479999999999999999999988  6899999864  222222221   1112333322 2234467899999999996


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ..  ....+..+.+..|+..+..+++.+.+.+.  +++++|-
T Consensus        79 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           79 PR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            32  22344456789999999999999888763  6776543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.39  E-value=5.6e-07  Score=82.12  Aligned_cols=112  Identities=15%  Similarity=0.133  Sum_probs=74.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--e-----EEEEeCCCC--Cchhhhhccc--CCCCe-EEEEcccccccccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--S-----VIVVDNFFT--GRKENVMHHF--GNPNF-ELIRHDVVEPLLLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~-----V~~~~r~~~--~~~~~~~~~~--~~~~v-~~~~~D~~~~~~~~vD~v  184 (290)
                      ++|.||||+|+||.+++..|+..|.  +     ++++|+...  ..+-...++.  ..+-. .+...+-..+.+.++|+|
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDvV   83 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA   83 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCEE
Confidence            5899999999999999999998875  4     888886421  1111111111  11111 122222234567899999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcC
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTST  230 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---riV~vSS  230 (290)
                      |++||..  .....+..+.++.|+..+.++++++++.+.   +++.+|.
T Consensus        84 vitAg~p--rkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           84 ILVGSMP--RRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EECCSCC--CCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEeCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999853  233445667889999999999999998873   4666654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.31  E-value=1.3e-06  Score=80.86  Aligned_cols=78  Identities=14%  Similarity=-0.002  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCCeEEEEeCCCCCchhh-----------hhccc--CCCCeEEEEcccccc---
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLI-ARGDSVIVVDNFFTGRKEN-----------VMHHF--GNPNFELIRHDVVEP---  176 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~-~~G~~V~~~~r~~~~~~~~-----------~~~~~--~~~~v~~~~~D~~~~---  176 (290)
                      ..+|++||||||++||.+.+..|+ +.|+.|+++.+..+.....           ..+..  ...+...+.+|+.++   
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457899999999999999999998 6799999998765433221           11111  346788999999776   


Q ss_pred             ---------cccCCCEEEEcccCC
Q 022900          177 ---------LLLEVDQIYHLACPA  191 (290)
Q Consensus       177 ---------~~~~vD~vih~Ag~~  191 (290)
                               .++++|+|||++|..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence                     346799999999964

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.30  E-value=3.7e-06  Score=65.87  Aligned_cols=99  Identities=18%  Similarity=0.144  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~  187 (290)
                      .++++|+|+|+ |.+|..+++.|.+.|++|++++++.    +..... .......+.+|..+..      ..++|+||++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~----~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE----EKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH----HHHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence            35678999997 9999999999999999999998742    222221 1123456677776542      4579999998


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccc
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY  234 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vy  234 (290)
                      ++.        +    .+.|.    .+...+++.+. +++..++...|
T Consensus        78 ~~~--------~----~~~~~----~~~~~~~~~~~~~ii~~~~~~~~  109 (144)
T 2hmt_A           78 IGA--------N----IQAST----LTTLLLKELDIPNIWVKAQNYYH  109 (144)
T ss_dssp             CCS--------C----HHHHH----HHHHHHHHTTCSEEEEECCSHHH
T ss_pred             CCC--------c----hHHHH----HHHHHHHHcCCCeEEEEeCCHHH
Confidence            863        1    12333    24556666665 77776665544

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.28  E-value=8e-07  Score=84.32  Aligned_cols=103  Identities=17%  Similarity=0.135  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC-CCCeEEEEcccccc-----cccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~v~~~~~D~~~~-----~~~~vD~vih~A  188 (290)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+..+    ...... -..+..+.+|+.+.     .+.++|+||||+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~----a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLES----AKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHH----HHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHH----HHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            467899998 8999999999999999999999885322    222211 12467788888754     245799999999


Q ss_pred             cCCCCCCCCCChHHHHHH--H-------HHHHHHHHHHHHHcCCeE
Q 022900          189 CPASPVHYKFNPVKTIKT--N-------VVGTLNMLGLAKRVGARF  225 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~--N-------v~gt~~ll~a~~~~~~ri  225 (290)
                      +......   -....++.  |       ...+.+++++|++.|.++
T Consensus        77 ~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~  119 (450)
T 1ff9_A           77 PYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV  119 (450)
T ss_dssp             C--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEE
T ss_pred             ccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeE
Confidence            8532110   01111221  1       135678889999888653

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.17  E-value=1.8e-06  Score=80.78  Aligned_cols=95  Identities=16%  Similarity=0.245  Sum_probs=66.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc-----ccC--CCE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----LLE--VDQ  183 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~-----~~~--vD~  183 (290)
                      |++|+|+|| |+||+++++.|++.|.   .|++.+|+..+..+......  ...++..+..|+.+..     +.+  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            468999998 9999999999999983   89999986443333222221  1236888899987652     233  899


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vS  229 (290)
                      |||||++..                  ...++++|.+.+++++-++
T Consensus        80 Vin~ag~~~------------------~~~v~~a~l~~g~~vvD~a  107 (405)
T 4ina_A           80 VLNIALPYQ------------------DLTIMEACLRTGVPYLDTA  107 (405)
T ss_dssp             EEECSCGGG------------------HHHHHHHHHHHTCCEEESS
T ss_pred             EEECCCccc------------------ChHHHHHHHHhCCCEEEec
Confidence            999997410                  1366788888888766543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.09  E-value=8.3e-06  Score=74.60  Aligned_cols=113  Identities=15%  Similarity=0.201  Sum_probs=74.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhh---hhcc-cCCCCeEEEEcccccccccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKEN---VMHH-FGNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~---~~~~-~~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      +.+++|.|+|++|++|..++..++.+|  .+|+++|++....+..   +.+. ....++.+ ..| ..+.+.++|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t~d-~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-TSD-IKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-ESC-HHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-cCC-HHHHhCCCCEEEEc
Confidence            567899999999999999999999998  4899998743221111   1111 11123332 122 23457889999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--e-EEEEcC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--R-FLLTST  230 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--r-iV~vSS  230 (290)
                      ||..  .....+-.+.++.|+.....+.+.+.+.+.  . ++.+|.
T Consensus        84 aG~p--~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           84 GGAP--RKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             cCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9953  333445677899999999999999988763  3 455543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.09  E-value=1.5e-05  Score=62.73  Aligned_cols=69  Identities=23%  Similarity=0.274  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~A  188 (290)
                      ++++|+|+|+ |.+|.++++.|.++|++|++++++.    +.+.... ...+.++.+|.+++.      ..++|+||.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~----~~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK----EKIELLE-DEGFDAVIADPTDESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH----HHHHHHH-HTTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH----HHHHHHH-HCCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence            4578999996 9999999999999999999999743    2222221 134678889998764      34689999876


Q ss_pred             c
Q 022900          189 C  189 (290)
Q Consensus       189 g  189 (290)
                      +
T Consensus        79 ~   79 (141)
T 3llv_A           79 S   79 (141)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.06  E-value=3.2e-05  Score=60.16  Aligned_cols=69  Identities=19%  Similarity=0.258  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      +|+|+|+|+ |.+|..+++.|.+.|++|++++++..    ..........+.++.+|..+..      ..++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKD----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            468999986 99999999999999999999987432    2221111124556677765432      457999999864

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.02  E-value=3.7e-05  Score=69.83  Aligned_cols=111  Identities=16%  Similarity=0.134  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhh---hhccc--CCCCeEEEEcccccccccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHHF--GNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~---~~~~~--~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++|++....+..   +.+..  ....+.+...|  .+.+.+.|+||.+
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--~~a~~~aDvVvi~   80 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--YEDCKDADIVCIC   80 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--HHHhCCCCEEEEe
Confidence            4578999995 9999999999999886  899998753222211   11111  11234444433  3567889999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ||..  .....+-.+.++.|+.....+.+.+.+.+.  .++.+|-
T Consensus        81 ag~p--~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           81 AGAN--QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             CSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             cccC--CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9853  333445677899999999999999988764  5555553

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.88  E-value=0.00018  Score=65.06  Aligned_cols=111  Identities=14%  Similarity=0.071  Sum_probs=77.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccC-----CCCeEEE-EcccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-----NPNFELI-RHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~-~~D~~~~~~~~vD~vih  186 (290)
                      +++++|.|+| +|.+|..++..|+..|. +|+++|++....+....++..     .....+. ..|  .+.+.+.|+||.
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d--~~a~~~aDvVIi   79 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND--YKDLENSDVVIV   79 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--GGGGTTCSEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC--HHHHCCCCEEEE
Confidence            3457899999 59999999999999987 999999865433222222211     1123333 234  367889999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      +||..  .....+-.+++..|+.-...+.+.+.+.+.  .++.+|
T Consensus        80 ~ag~p--~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           80 TAGVP--RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             CCSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCCcC--CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99853  333446677889999999999999887764  555554

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.86  E-value=0.00013  Score=65.86  Aligned_cols=111  Identities=14%  Similarity=0.062  Sum_probs=76.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-C--CeEEEEeCCCCCchhhhhcccCC-CCeEEEE--cccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-G--DSVIVVDNFFTGRKENVMHHFGN-PNFELIR--HDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G--~~V~~~~r~~~~~~~~~~~~~~~-~~v~~~~--~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.|+||+|.+|..++..|..+ +  .+++++|... ..+-...++... ....+..  .+-..+.+.++|+||-.||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence            47999999999999999999875 4  4789998754 222222222221 2233322  22334578899999999995


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      .  .....+-.+.++.|+.-...+.+.+.+.+.  .++.+|-
T Consensus        80 ~--rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           80 A--RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             S--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            3  333456788899999999999999888763  5666653

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.86  E-value=2e-05  Score=69.59  Aligned_cols=74  Identities=19%  Similarity=0.235  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-cCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-LEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~vD~vih~Ag~~  191 (290)
                      .++++++|+|+ |++|++++..|++.|++|++++|+.++..+..........++.  .|. +... .++|+||||++..
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~--~~~-~~~~~~~~DivVn~t~~~  191 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSM-DELEGHEFDLIINATSSG  191 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCS-GGGTTCCCSEEEECCSCG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeE--ecH-HHhccCCCCEEEECCCCC
Confidence            46789999997 7899999999999999999998754332222222111112332  232 1111 5799999999854

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.83  E-value=9.6e-05  Score=66.98  Aligned_cols=112  Identities=11%  Similarity=0.047  Sum_probs=74.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhh---hhccc--CCCCeEEE-EcccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN---VMHHF--GNPNFELI-RHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~---~~~~~--~~~~v~~~-~~D~~~~~~~~vD~vih  186 (290)
                      +++++|.|+|+ |.+|..++..|+..|. +|+++|++....+..   +.+..  ......+. ..|.  +.+.+.|+||.
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~--~a~~~aDiVIi   81 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY--AAIEGADVVIV   81 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG--GGGTTCSEEEE
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH--HHHCCCCEEEE
Confidence            45679999997 9999999999999998 999999865433211   11111  11122232 2453  67889999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      +||..  .....+-.+.+..|+.-...+.+.+.+.+.  .++.+|-
T Consensus        82 aag~p--~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           82 TAGVP--RKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             CCSCC--CC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ccCcC--CCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            99853  223334556788999999999999887764  5666554

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.83  E-value=4.8e-05  Score=69.01  Aligned_cols=112  Identities=14%  Similarity=0.177  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhh---hhcccC-CCCeEEEEcccccccccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHHFG-NPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~---~~~~~~-~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      ..+++|.|+|+ |.+|..++..|+..|.  +++++|++....+..   +.+... ...+.+...|  .+.+.+.|+||.+
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--~~a~~~aDiVvi~   83 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--YSDAKDADLVVIT   83 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--HHHhcCCCEEEEC
Confidence            35679999995 9999999999999887  899998743222211   111111 1234444433  4568899999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ||..  .....+-.+.++.|+.-...+.+.+.+.+.  .++.+|-
T Consensus        84 ag~~--~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           84 AGAP--QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             CCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             CCCC--CCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            9953  222334556788999999999999888764  5555543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.81  E-value=0.00047  Score=55.12  Aligned_cols=71  Identities=23%  Similarity=0.192  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~  187 (290)
                      ..+++|+|+|+ |.+|..+++.|.+.|++|++++++....    ........+.++.+|..+..      ..++|+||.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~----~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF----HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG----GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH----HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            45679999995 9999999999999999999998753322    22211234556667764431      4568999988


Q ss_pred             cc
Q 022900          188 AC  189 (290)
Q Consensus       188 Ag  189 (290)
                      .+
T Consensus        92 ~~   93 (155)
T 2g1u_A           92 TN   93 (155)
T ss_dssp             SS
T ss_pred             eC
Confidence            75

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.78  E-value=0.00029  Score=63.62  Aligned_cols=108  Identities=17%  Similarity=0.145  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC----CCeEEEEcccccccccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN----PNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .++|.|+|+ |++|..++..|+..|.  +|+++|.+..+.+....++...    ..+.+...|  .+.+.+.|+||.+++
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~--~~a~~~aDvVii~~g   83 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD--YSDVKDCDVIVVTAG   83 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C--GGGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC--HHHhCCCCEEEEcCC
Confidence            468999997 9999999999999987  8999998754433222222111    234444323  556889999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT  228 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~v  228 (290)
                      ..  .....+-.+.+..|+.....+++.+.+.+.  .++.+
T Consensus        84 ~p--~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           84 AN--RKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             C--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             CC--CCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            53  222334566788999999999999887653  44443

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.77  E-value=0.00019  Score=64.19  Aligned_cols=109  Identities=16%  Similarity=0.083  Sum_probs=76.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchh---hhhccc--CCCCeEEE-EcccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHF--GNPNFELI-RHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~---~~~~~~--~~~~v~~~-~~D~~~~~~~~vD~vih~A  188 (290)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++|++....+.   .+.+..  ......+. ..|  .+.+.+.|+||.+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--~~a~~~aDiVViaa   77 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--YSLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC--GGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC--HHHhCCCCEEEECC
Confidence            57999998 9999999999999988  89999985432211   111111  11223333 234  67788999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      |..  .....+-.+.++.|+.-...+.+.+.+.+.  .++.+|.
T Consensus        78 g~~--~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           78 GLA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CCC--CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            853  333445677899999999999999988764  5666654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.75  E-value=0.00021  Score=65.24  Aligned_cols=114  Identities=12%  Similarity=0.017  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCCc--h---hhhhcccCCCCeEEEEcccccccccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGR--K---ENVMHHFGNPNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~--~---~~~~~~~~~~~v~~~~~D~~~~~~~~vD  182 (290)
                      +.-+|.|+||+|.||+.++..|+....       ++.++|......  +   -.+.+............+-..+.+.+.|
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~ad  102 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVA  102 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCC
Confidence            345899999999999999998887532       677777632111  1   1122221112233333333456788999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcC
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTST  230 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS  230 (290)
                      +||-.||.  +.....+-.+.++.|..-...+.+.+.+..   ++++.+|.
T Consensus       103 vVvi~aG~--prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A          103 IAIMCGAF--PRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             EEEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEECCCC--CCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            99999995  344456778899999999999999987753   35666664

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.75  E-value=0.00011  Score=67.39  Aligned_cols=91  Identities=13%  Similarity=0.089  Sum_probs=63.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      +.+.|+|+|.|| |++|+.+++.|.+ .++|.+.+++.    +.+...  ...+..+..|+.+..     +.++|+||++
T Consensus        13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~----~~~~~~--~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           13 EGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNN----ENLEKV--KEFATPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCH----HHHHHH--TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCH----HHHHHH--hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            345578999998 9999999998865 57999988743    222222  234566778887653     4679999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vS  229 (290)
                      +++.              .    ...++++|.+.|+++|=+|
T Consensus        85 ~p~~--------------~----~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           85 LPGF--------------L----GFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CCGG--------------G----HHHHHHHHHHHTCEEEECC
T ss_pred             cCCc--------------c----cchHHHHHHhcCcceEeee
Confidence            8631              0    1357889999998877665

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.75  E-value=8.2e-06  Score=68.05  Aligned_cols=35  Identities=20%  Similarity=0.249  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+++|+||||+|+||..+++.+...|++|++++++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~   72 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS   72 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            56899999999999999999999999999999875

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.74  E-value=0.00025  Score=63.78  Aligned_cols=109  Identities=16%  Similarity=0.171  Sum_probs=70.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccC-----CCCeEEEE-cccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-----NPNFELIR-HDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~~-~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|++..+.+....++..     .....+.. .|.  +.+.++|+||.++|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~a~g   79 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--ADTANSDVIVVTSG   79 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--GGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--HHHCCCCEEEEcCC
Confidence            58999998 9999999999999997 888888764333222222211     11222322 454  56889999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                      ...  .....-.+....|+.....+.+.+.+.+. .++++.|
T Consensus        80 ~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           80 APR--KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            532  22223345677888888899998887764 4554444

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.71  E-value=0.00018  Score=64.89  Aligned_cols=111  Identities=16%  Similarity=0.079  Sum_probs=76.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC--CCchhhhhccc-------CCCCeEEEEcccccccccCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF--TGRKENVMHHF-------GNPNFELIRHDVVEPLLLEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~--~~~~~~~~~~~-------~~~~v~~~~~D~~~~~~~~vD~  183 (290)
                      .+.++|.|+|+ |.+|..++..|+..|. +|+++|++.  ...+....++.       ...++.. ..|  .+.+.++|+
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d--~~a~~~aDv   81 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD--YADTADSDV   81 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC--GGGGTTCSE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC--HHHhCCCCE
Confidence            34578999996 9999999999999999 999998752  11111111111       1122222 123  356789999


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ||-+||..  .....+-.+.++.|+.-...+.+.+.+.+.  .++.+|.
T Consensus        82 VIiaag~p--~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           82 VVITAGIA--RKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             EEECCSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEeCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            99999953  333445678899999999999999887764  5666654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.66  E-value=0.00011  Score=58.78  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=51.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      .++|+|+|+ |.+|..+++.|.+.|++|++++++.....+.+.... ...+.++.+|.+++.      +.+.|.||.+.+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            457999995 999999999999999999999874211111222211 235788899987663      457899997764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.66  E-value=3.2e-05  Score=73.63  Aligned_cols=73  Identities=22%  Similarity=0.300  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih  186 (290)
                      ..++++|+|+|+ |++|++++..|++. |++|++++|+.++..+....    ..+..+..|+.+.     .+.++|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~~~~~~~~D~~d~~~l~~~l~~~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----SGSKAISLDVTDDSALDKVLADNDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence            356789999997 99999999999998 78999998853322222111    2356667777543     3457999999


Q ss_pred             cccC
Q 022900          187 LACP  190 (290)
Q Consensus       187 ~Ag~  190 (290)
                      |++.
T Consensus        95 ~tp~   98 (467)
T 2axq_A           95 LIPY   98 (467)
T ss_dssp             CSCG
T ss_pred             CCch
Confidence            9985

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.65  E-value=0.00032  Score=63.57  Aligned_cols=110  Identities=15%  Similarity=0.152  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC----CCeEEEEcccccccccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN----PNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      +.++|.|+|| |.+|..++..|+..+.  ++.++|++..+.+....++...    ..+.+.. | ..+.+.+.|+||..+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~-~~~a~~~aDvVii~a   84 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A-EYSDAKDADLVVITA   84 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C-CGGGGGGCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEEcC
Confidence            4468999998 9999999999988775  8999987532222212211111    3444443 3 356688999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      |..  .....+-.+.+..|+.-...+.+.+.+.+.  .++.+|
T Consensus        85 g~~--~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           85 GAP--QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            853  223345567788999999999998887663  555553

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.65  E-value=0.00027  Score=64.17  Aligned_cols=112  Identities=14%  Similarity=0.090  Sum_probs=76.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhh---hhcccC-CCCeEEE-EcccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHHFG-NPNFELI-RHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~---~~~~~~-~~~v~~~-~~D~~~~~~~~vD~vih  186 (290)
                      ...++|.|+|+ |.+|..++..|+.+|.  +|+++|++....+..   +.+... .....++ ..|.  +.+.+.|+||.
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~--~~~~~aDiVvi   93 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY--SVTANSKLVII   93 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG--GGGTTEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH--HHhCCCCEEEE
Confidence            45679999996 9999999999999987  899998753222221   111110 1122223 3343  35889999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      +||..  .....+-.+.++.|+.-...+.+.+.+...  .++.+|-
T Consensus        94 ~aG~~--~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           94 TAGAR--QQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             CCSCC--CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ccCCC--CCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99953  333455677889999999999999887753  5555554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.59  E-value=0.00039  Score=63.12  Aligned_cols=105  Identities=12%  Similarity=0.035  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcc------c-CCCCeEEEEcccccccccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH------F-GNPNFELIRHDVVEPLLLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~------~-~~~~v~~~~~D~~~~~~~~vD~vi  185 (290)
                      .+.++|.|+|| |.+|..++..|+..|+ +|+++|++.+..+.....+      . ...++.. ..|+ ++.+.+.|+||
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~-~ea~~~aDiVi   83 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSY-EAALTGADCVI   83 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSH-HHHHTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCH-HHHhCCCCEEE
Confidence            34568999997 9999999999999998 9999998653332211111      1 1123332 1343 33678999999


Q ss_pred             EcccCCCCCCCCC-----ChHHHHHHHHHHHHHHHHHHHHcCC
Q 022900          186 HLACPASPVHYKF-----NPVKTIKTNVVGTLNMLGLAKRVGA  223 (290)
Q Consensus       186 h~Ag~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~a~~~~~~  223 (290)
                      -.+|...  ....     +-.+....|+.-...+.+.+.+...
T Consensus        84 ~a~g~p~--~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p  124 (331)
T 1pzg_A           84 VTAGLTK--VPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCP  124 (331)
T ss_dssp             ECCSCSS--CTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred             EccCCCC--CCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998532  2222     3455677888888888888877653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.58  E-value=3.3e-05  Score=68.66  Aligned_cols=74  Identities=14%  Similarity=0.077  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC---CC---CeEEEEcccccccccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG---NP---NFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~---~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      .++++++|||++ ++|++++..|++.| +|++++|+.++..+.......   ..   .+++.  |+ .+.+.++|+||||
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~--~~-~~~~~~~DilVn~  200 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS--GL-DVDLDGVDIIINA  200 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE--CT-TCCCTTCCEEEEC
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEe--eH-HHhhCCCCEEEEC
Confidence            567899999975 99999999999999 999998753322222111100   00   12222  22 4456789999999


Q ss_pred             ccCCC
Q 022900          188 ACPAS  192 (290)
Q Consensus       188 Ag~~~  192 (290)
                      ++...
T Consensus       201 ag~~~  205 (287)
T 1nvt_A          201 TPIGM  205 (287)
T ss_dssp             SCTTC
T ss_pred             CCCCC
Confidence            99643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.56  E-value=0.00052  Score=61.73  Aligned_cols=108  Identities=14%  Similarity=0.063  Sum_probs=75.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcccC----CCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++|.|+|| |.+|..++..|+..+  .++.++|++..+.+....++..    ...+.+...|  .+.+.+.|+||..+|.
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~--~~a~~~aD~Vii~ag~   77 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS--YGDLEGARAVVLAAGV   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTEEEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECC--HHHhCCCCEEEECCCC
Confidence            47999997 999999999999987  5899998753222221222211    1244444433  5678899999999985


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      .  .....+-.+.+..|+.-...+.+.+.+.+.  .++.+|
T Consensus        78 ~--~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           78 A--QRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             C--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             C--CCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            3  233345567788999999999999888763  566554

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.56  E-value=0.00059  Score=61.50  Aligned_cols=109  Identities=19%  Similarity=0.205  Sum_probs=73.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhh---ccc--CCCCeEEEEcccccccccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVM---HHF--GNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~---~~~--~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      +.++|.|+|| |.+|..++..|+.+|  .+|.++|++..+.+....   +..  ....+.+.. | ..+.+.+.|+||..
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~-~~~a~~~aDvVvi~   81 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G-EYSDCHDADLVVIC   81 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C-CGGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C-CHHHhCCCCEEEEC
Confidence            4568999998 999999999999888  489999875322211111   111  113344443 3 25568899999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT  228 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~v  228 (290)
                      +|..  .....+-.+.+..|+.-...+.+.+.+.+.  .++.+
T Consensus        82 ag~~--~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           82 AGAA--QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             CCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            9853  333445567788999999999998887764  44443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.55  E-value=0.00036  Score=62.32  Aligned_cols=109  Identities=17%  Similarity=0.079  Sum_probs=74.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc-----CCCCeEEEE-cccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF-----GNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~-~D~~~~~~~~vD~vih~A  188 (290)
                      |+|.|+| +|+||+.++..|+.++.  ++.++|.+....+-...++.     -.....+.. .|.  +.+.+.|+||-.|
T Consensus         1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~--~~~~~aDvVvitA   77 (294)
T 2x0j_A            1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY--SLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG--GGGTTCSEEEECC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH--HHhCCCCEEEEec
Confidence            5799999 49999999999988764  78888875322221111111     112222322 232  4678999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      |..  .....+-.+.++.|..-...+.+.+.+.+.  .++.+|-
T Consensus        78 G~p--rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           78 GLA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CCC--CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCC--CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            953  444567788999999999999999988774  4555554

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.55  E-value=2.8e-05  Score=70.24  Aligned_cols=70  Identities=16%  Similarity=0.088  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-cc---------ccCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-PL---------LLEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~---------~~~vD~  183 (290)
                      ..+++|+||||+|+||..+++.+...|++|++++++..+. +.+.+. +. . ..+  |..+ +.         -.++|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-~~~~~~-g~-~-~~~--d~~~~~~~~~~~~~~~~~~~d~  217 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQI-GF-D-AAF--NYKTVNSLEEALKKASPDGYDC  217 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT-TC-S-EEE--ETTSCSCHHHHHHHHCTTCEEE
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhc-CC-c-EEE--ecCCHHHHHHHHHHHhCCCCeE
Confidence            3578999999999999999999999999999998753222 222222 21 1 112  3322 11         136999


Q ss_pred             EEEccc
Q 022900          184 IYHLAC  189 (290)
Q Consensus       184 vih~Ag  189 (290)
                      +|+|+|
T Consensus       218 vi~~~g  223 (333)
T 1v3u_A          218 YFDNVG  223 (333)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.55  E-value=0.00052  Score=61.88  Aligned_cols=110  Identities=10%  Similarity=0.012  Sum_probs=73.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++|++....+....++.     ......+...| ..+.+.+.|+||-+||
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~-~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN-DYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES-SSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC-CHHHhCCCCEEEECCC
Confidence            57999996 9999999999999886  89999986533222111111     11233333222 2567889999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ..  .....+-.+.++.|+.-...+.+.+.+.+.  .++.+|-
T Consensus        79 ~~--~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           79 LP--RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             C---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             CC--CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            53  222345567889999999999999988764  5665554

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.54  E-value=0.00012  Score=64.67  Aligned_cols=73  Identities=14%  Similarity=0.226  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc--cCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--~~vD~vih~Ag~~  191 (290)
                      .++++++|+|+ |++|++++..|++.|++|++++|+.++..+..........+.....+    .+  .++|+|||+++..
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~----~~~~~~~DivIn~t~~~  191 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD----SIPLQTYDLVINATSAG  191 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----GCCCSCCSEEEECCCC-
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHH----HhccCCCCEEEECCCCC
Confidence            46789999997 88999999999999999999988643322222221111123333221    22  4799999999853

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.49  E-value=0.0004  Score=62.74  Aligned_cols=109  Identities=15%  Similarity=0.137  Sum_probs=69.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC----CCCeEEEEcccccccccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .++|.|+|| |.+|..++..|+..+.  ++.++|++..+.+....++..    ...+.+.. | ..+.+.+.|+||..+|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~-~~~a~~~aDvVii~ag   81 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G-EYSDCKDADLVVITAG   81 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C-CGGGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEECCC
Confidence            368999998 9999999999998876  899998753222211111111    13444443 3 3566889999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      ...  ....+-.+.+..|+.-...+.+.+.+.+.  .++.+|
T Consensus        82 ~~~--~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           82 APQ--KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            632  22233345678899999999998888763  555553

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.48  E-value=0.00023  Score=65.21  Aligned_cols=97  Identities=9%  Similarity=0.125  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-----C-eEEEEeCC-CCCc-hhhhhcccCC-CCeEEEEcccccccccCCCEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG-----D-SVIVVDNF-FTGR-KENVMHHFGN-PNFELIRHDVVEPLLLEVDQIY  185 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G-----~-~V~~~~r~-~~~~-~~~~~~~~~~-~~v~~~~~D~~~~~~~~vD~vi  185 (290)
                      ++++|.|.||+|.+|+.+++.|.+++     . +++.+.+. .... -......+.. .++.+.+.|  .+.+.++|+||
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~DvVf   85 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAVF   85 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCEEE
Confidence            45799999999999999999999987     4 67766432 1111 1111000111 233333333  23455899999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      .|.+...                  +..++..+ +.|+++|-+|+..
T Consensus        86 ~alg~~~------------------s~~~~~~~-~~G~~vIDlSa~~  113 (352)
T 2nqt_A           86 LALPHGH------------------SAVLAQQL-SPETLIIDCGADF  113 (352)
T ss_dssp             ECCTTSC------------------CHHHHHHS-CTTSEEEECSSTT
T ss_pred             ECCCCcc------------------hHHHHHHH-hCCCEEEEECCCc
Confidence            9987421                  33456667 7788999999874

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.47  E-value=0.0017  Score=58.21  Aligned_cols=108  Identities=14%  Similarity=0.120  Sum_probs=71.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCCCCCchhhhhcccC-----CCCeEEEE-cccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFG-----NPNFELIR-HDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~-----~~~v~~~~-~D~~~~~~~~vD~vih~A  188 (290)
                      |+|.|.|+ |.+|..++..|++.  |++|+++|++....+....++..     .....+.. .|. + .+.++|+||-++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~-~l~~aDvViiav   77 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY-A-DTANSDIVIITA   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG-G-GGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCH-H-HHCCCCEEEEeC
Confidence            47999997 99999999999985  78999999875433221111111     11222222 344 2 378899999998


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      +.  +........+.+..|+.-...+.+.+.+...  .++.++
T Consensus        78 ~~--p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           78 GL--PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             SC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             CC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            74  2222334567788899988899888877653  555553

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.44  E-value=5.2e-05  Score=73.15  Aligned_cols=73  Identities=15%  Similarity=0.132  Sum_probs=44.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc-ccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~vD~vih~Ag~~  191 (290)
                      .++++++|||| |++|++++..|++.|++|++++|+.++..+.... ++ .++  ... |+.+....++|+||||+|..
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~-~~-~~~--~~~~dl~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEA-IG-GKA--LSLTDLDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHH-TT-C-C--EETTTTTTC--CCSEEEEECSSTT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-cC-Cce--eeHHHhhhccccCceEEEECCCCC
Confidence            46789999998 7999999999999999999998864332222222 12 122  222 32111223589999999964

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.43  E-value=0.00068  Score=60.70  Aligned_cols=108  Identities=18%  Similarity=0.182  Sum_probs=65.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC----CCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN----PNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++|.|+|| |.+|..++..|+..|+  +|+++|++..+......+....    ....+...|  .+.+.++|+||.+++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~--~~a~~~aDvVIi~~~~   77 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG--HSELADAQVVILTAGA   77 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC--GGGGTTCSEEEECC--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC--HHHhCCCCEEEEcCCC
Confidence            47999997 9999999999999998  9999998632222111111110    123333223  3567899999999975


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      ..  ....+-.+.+..|+.....+.+.+.+...  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           78 NQ--KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CC--CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            32  22223345677888888888888877553  444443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.40  E-value=4.7e-05  Score=68.85  Aligned_cols=37  Identities=27%  Similarity=0.328  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+++|+|+||+|+||..++..+...|++|++++++.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~  184 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA  184 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            4578999999999999999999999999999998753

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.40  E-value=0.00076  Score=61.16  Aligned_cols=111  Identities=14%  Similarity=-0.006  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhh---hcccC-CCCeEEE-EcccccccccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHHFG-NPNFELI-RHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~---~~~~~-~~~v~~~-~~D~~~~~~~~vD~vih~  187 (290)
                      ..++|.|+|+ |.+|..++..|+.+|.  +|+++|++....+...   .+... .....+. ..|..  .+.++|+||-+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~--~~~daDiVIit   96 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS--VSAGSKLVVIT   96 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC--SCSSCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH--HhCCCCEEEEe
Confidence            4579999998 9999999999999986  8999987532222111   11111 1122222 34542  38899999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ||..  .....+-.+.+..|+.-...+.+.+.+.+.  .++.+|-
T Consensus        97 aG~p--~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           97 AGAR--QQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             CSCC--CCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCC--CCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            9963  223344556778899889999998887763  5666554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.39  E-value=7.9e-05  Score=68.64  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEE--cccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR--HDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~--~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|+|+ |.||..+++.+...|++|++++|+..+.. .+.+..+ ..+....  .+..++.+.++|+||+|++.
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~-~~~~~~g-~~~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ-YLDDVFG-GRVITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTT-TSEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHhcC-ceEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            56789999998 99999999999999999999998543222 1222112 2222211  11123345679999999985

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.38  E-value=5e-05  Score=69.30  Aligned_cols=35  Identities=29%  Similarity=0.218  Sum_probs=32.3

Q ss_pred             CC--CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          115 KG--LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       115 ~~--k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      .+  ++|+|+||+|+||..++..+...|+ +|++++++
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~  195 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT  195 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC
Confidence            46  8999999999999999999999999 99999875

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.38  E-value=0.002  Score=58.15  Aligned_cols=108  Identities=13%  Similarity=0.099  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-------CCCCeEEEEcccccccccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-------GNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-------~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      +++|.|+|| |.+|..++..|+..|. +|+++|++..+.+.....+.       ...++... .|.  +.+.++|+||.+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~--~al~~aD~Vi~a   79 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY--DDLAGADVVIVT   79 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH--HHhCCCCEEEEe
Confidence            468999997 9999999999999998 88889876433321111111       12233322 454  568899999999


Q ss_pred             ccCCCCCCCCCC-----hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          188 ACPASPVHYKFN-----PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       188 Ag~~~~~~~~~~-----~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      +|...  .....     -.+....|+.-...+.+.+.+...  .++++|
T Consensus        80 ~g~p~--k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           80 AGFTK--APGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             CSCSS--CTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCC--CCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            98532  22222     345567788777888877766543  444443

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.36  E-value=0.00041  Score=63.20  Aligned_cols=93  Identities=19%  Similarity=0.197  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEe-CCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~-r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +++|.|.||+|.+|+.+++.|.++++   +++.+. +......  + . +....+.+.+.|  ...+.++|+||.+.+..
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~--~-~-~~g~~i~~~~~~--~~~~~~~DvV~~a~g~~   79 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR--M-G-FAESSLRVGDVD--SFDFSSVGLAFFAAAAE   79 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE--E-E-ETTEEEECEEGG--GCCGGGCSEEEECSCHH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc--c-c-cCCcceEEecCC--HHHhcCCCEEEEcCCcH
Confidence            36899999999999999999997765   445553 2211111  1 0 122233333333  23356899999988621


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                        .+...+..+.+.|+++|.+|+..
T Consensus        80 ------------------~s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           80 ------------------VSRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ------------------HHHHHHHHHHHCCCEEEEeCCCC
Confidence                              13456677778888888888764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.36  E-value=0.00011  Score=66.68  Aligned_cols=70  Identities=21%  Similarity=0.222  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-c----cc-----cCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-P----LL-----LEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-~----~~-----~~vD~  183 (290)
                      ..+++|+|+||+|+||..++..+...|++|++++++..+. +...+. +. . ..+  |..+ +    .+     .++|+
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~-g~-~-~~~--d~~~~~~~~~~~~~~~~~~~D~  241 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSI-GG-E-VFI--DFTKEKDIVGAVLKATDGGAHG  241 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHT-TC-C-EEE--ETTTCSCHHHHHHHHHTSCEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHc-CC-c-eEE--ecCccHhHHHHHHHHhCCCCCE
Confidence            3578999999999999999999999999999999754332 222222 21 1 122  3321 1    11     16999


Q ss_pred             EEEccc
Q 022900          184 IYHLAC  189 (290)
Q Consensus       184 vih~Ag  189 (290)
                      ||+++|
T Consensus       242 vi~~~g  247 (347)
T 2hcy_A          242 VINVSV  247 (347)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999998

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.34  E-value=0.0003  Score=62.17  Aligned_cols=73  Identities=12%  Similarity=0.251  Sum_probs=43.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEE-eCCCCCc-hhhhhcccC--CCCeEEEEcccccccccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVV-DNFFTGR-KENVMHHFG--NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~-~r~~~~~-~~~~~~~~~--~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++++|.|+|++|.+|+.+++.+.+ .|++++++ ++..... ...+.+..+  ...+.. ..|+ ++.+.++|+||+++.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~-~~dl-~~~l~~~DvVIDft~   81 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QSSL-DAVKDDFDVFIDFTR   81 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ESCS-TTTTTSCSEEEECSC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee-cCCH-HHHhcCCCEEEEcCC
Confidence            346899999999999999999885 47787754 4432110 111111111  112221 2233 444557999998874

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.34  E-value=0.0022  Score=59.02  Aligned_cols=114  Identities=16%  Similarity=0.066  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--e---EEEEeCCCCCchhh----hhcccC-C-CC-eEEEEcccccccccCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--S---VIVVDNFFTGRKEN----VMHHFG-N-PN-FELIRHDVVEPLLLEVD  182 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~---V~~~~r~~~~~~~~----~~~~~~-~-~~-v~~~~~D~~~~~~~~vD  182 (290)
                      +..+|.|+||+|.||.+++-.|+..+.  +   +.+.+.......+.    ..++.. . +- -.+...+-..+.+.+.|
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daD  110 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  110 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCC
Confidence            456899999999999999999998764  2   66654433232111    122211 1 11 11111222345688999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-C--CeEEEEcC
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G--ARFLLTST  230 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~--~riV~vSS  230 (290)
                      +||-.||.  +.....+-.+.++.|+.-...+.+++.+. +  ..++.+|.
T Consensus       111 vVVitag~--prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          111 WALLIGAK--PRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             EEEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            99999985  33344567788999999999999988874 4  36666664

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.33  E-value=0.00018  Score=64.91  Aligned_cols=77  Identities=9%  Similarity=0.058  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC---CCchhhhhccc--CCCCeEEEEccc---ccccccCCCE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF---TGRKENVMHHF--GNPNFELIRHDV---VEPLLLEVDQ  183 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~---~~~~~~~~~~~--~~~~v~~~~~D~---~~~~~~~vD~  183 (290)
                      ..++++++|+|+ |++|++++..|++.|. +|++++|+.   ++..+...++.  ....+..+..+-   ..+.+.+.|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            357899999996 8999999999999998 899999862   22222211111  112344444332   1234568999


Q ss_pred             EEEcccC
Q 022900          184 IYHLACP  190 (290)
Q Consensus       184 vih~Ag~  190 (290)
                      |||+...
T Consensus       230 IINaTp~  236 (315)
T 3tnl_A          230 FTNATGV  236 (315)
T ss_dssp             EEECSST
T ss_pred             EEECccC
Confidence            9998753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=7e-05  Score=68.36  Aligned_cols=37  Identities=22%  Similarity=0.220  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+++|+|+||+|+||..++..+...|++|++++++.
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~  205 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE  205 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence            3578999999999999999999999999999998753

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.31  E-value=0.00046  Score=60.97  Aligned_cols=72  Identities=10%  Similarity=0.154  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .++++++|+|+ |++|++++..|.+.|. +|++++|+.++..+..... ....+.....+-.+.  .+.|+|||+..
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~-~~~~~~~~~~~~l~~--~~~DivInaTp  190 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL-DHSRLRISRYEALEG--QSFDIVVNATS  190 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH-CCTTEEEECSGGGTT--CCCSEEEECSS
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh-ccCCeeEeeHHHhcc--cCCCEEEECCC
Confidence            57899999996 8999999999999996 8999988643333322222 222355544332222  67999999865

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.31  E-value=5e-05  Score=68.36  Aligned_cols=36  Identities=19%  Similarity=0.124  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+||||+|+||..+++.+...|++|++++++
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~  174 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT  174 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            357899999999999999999999999999999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.30  E-value=6.6e-05  Score=68.53  Aligned_cols=37  Identities=16%  Similarity=0.188  Sum_probs=33.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+++|+|+||+|+||..++..+...|++|++++++.
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~  197 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ  197 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3578999999999999999999999999999998753

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.29  E-value=0.00096  Score=54.65  Aligned_cols=70  Identities=19%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----c--ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----L--LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~--~~~vD~vi  185 (290)
                      ..+++|+|+| .|.+|..+++.|.+. |++|++++++...    ..... ...+.++.+|.+++     .  ..++|+||
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~----~~~~~-~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEA----AQQHR-SEGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHH----HHHHH-HTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHH----HHHHH-HCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            4466899998 699999999999999 9999999875322    22111 12355666776543     2  45789999


Q ss_pred             Eccc
Q 022900          186 HLAC  189 (290)
Q Consensus       186 h~Ag  189 (290)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.26  E-value=0.00021  Score=63.93  Aligned_cols=76  Identities=17%  Similarity=0.119  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..+++|+|+|+ |++|+.++..|++.|. +|++++|..++..+.... +....-.++..+-..+.+.++|+||++.+..
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~-~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE-GDERRSAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH-SCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-hhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence            56789999996 8899999999999998 899998754332222221 1111002222222334566899999999854

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.26  E-value=0.00026  Score=62.91  Aligned_cols=76  Identities=17%  Similarity=0.105  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .++++++|+|+ |++|++++..|++.|. +|++++|+.++..+......   ....+.....|-.++.+.+.|+|||+..
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp  203 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP  203 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence            57889999996 8999999999999998 79999886433322222211   1223444433334445567999999875


Q ss_pred             C
Q 022900          190 P  190 (290)
Q Consensus       190 ~  190 (290)
                      .
T Consensus       204 ~  204 (283)
T 3jyo_A          204 M  204 (283)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.24  E-value=7.1e-05  Score=67.60  Aligned_cols=36  Identities=22%  Similarity=0.244  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+|+||+|+||..+++.+...|++|++++++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~  179 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST  179 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999999999999999999999999999875

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.24  E-value=0.00019  Score=60.33  Aligned_cols=70  Identities=19%  Similarity=0.189  Sum_probs=45.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      |+|.|+||+|.+|.++++.|++.|++|++++|+...........   ....++.  . +-.++.+.++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT--G-MKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE--E-EEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC--h-hhHHHHHhcCCEEEEeCC
Confidence            47999999999999999999999999999988532222111110   0001232  1 222334567999999864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.23  E-value=0.00046  Score=61.21  Aligned_cols=73  Identities=15%  Similarity=0.172  Sum_probs=49.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++++++|+|+ |++|++++..|.+.|. +|++++|+.++..+..........+.....+-.   ..+.|+|||+...
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l---~~~aDiIInaTp~  197 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQL---KQSYDVIINSTSA  197 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC---CSCEEEEEECSCC
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHh---cCCCCEEEEcCcC
Confidence            57889999996 8999999999999996 899998864333332222211123444443322   2678999998753

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.22  E-value=0.0005  Score=58.15  Aligned_cols=68  Identities=15%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      |+|+|+|+ |.+|.++++.|.++|++|++++++.    +.+........+.++.+|.+++.      ..++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~----~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR----ELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH----HHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH----HHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            47999995 9999999999999999999998743    22222211235678899988763      457899997654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.21  E-value=0.00013  Score=66.13  Aligned_cols=36  Identities=19%  Similarity=0.202  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+|+||+|+||..++..+...|++|++++++
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~  189 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS  189 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999999999999999999999999999874

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.17  E-value=0.004  Score=56.30  Aligned_cols=107  Identities=12%  Similarity=0.042  Sum_probs=69.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhh---hccc----CCCCeEEEEcccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENV---MHHF----GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---~~~~----~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|++.+......   .+..    ...++... .|.  +.+.++|+||-++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~--~al~~aD~VI~av   90 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY--EYLQNSDVVIITA   90 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG--GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH--HHHCCCCEEEEcC
Confidence            58999997 9999999999999998 9999998654333211   1111    12233332 454  5678999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      |...  .....-.+....|+.-...+.+.+.+...  .++++|
T Consensus        91 g~p~--k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           91 GVPR--KPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             SCCC--CTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCC--CCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8532  22222234566788777788777766543  444443

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.16  E-value=0.0031  Score=57.26  Aligned_cols=93  Identities=15%  Similarity=0.194  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC---CeEEEEeC-CCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG---DSVIVVDN-FFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G---~~V~~~~r-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +++|.|.||+|.+|+.+++.|.+++   .+++++.. ......  +.  +...++.+.+.|  ...+.++|+||-|.+..
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~--~~--~~~~~i~~~~~~--~~~~~~vDvVf~a~g~~   76 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT--YR--FNGKTVRVQNVE--EFDWSQVHIALFSAGGE   76 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE--EE--ETTEEEEEEEGG--GCCGGGCSEEEECSCHH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc--ee--ecCceeEEecCC--hHHhcCCCEEEECCCch
Confidence            4689999999999999999999984   35666642 111111  11  122334443333  23456899999987621


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                        .+......+.+.|+++|-.|+..
T Consensus        77 ------------------~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           77 ------------------LSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ------------------HHHHHHHHHHHcCCEEEEcCCcc
Confidence                              13455666777888888888863

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.15  E-value=0.00083  Score=58.38  Aligned_cols=101  Identities=14%  Similarity=0.090  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCC-----------------ch-hhh----hcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG-----------------RK-ENV----MHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-----------------~~-~~~----~~~~~~~~v~~~~  170 (290)
                      +++++|+|.| .|++|.++++.|++.|. +++++|+..-.                 .+ +.+    ..+....+++.+.
T Consensus        29 l~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            4567999999 68999999999999997 88888876311                 00 111    1111122455555


Q ss_pred             cccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          171 HDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       171 ~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      .++.++    .+.++|+||.+..         ++        ..-..+.++|++.++.+|..+...
T Consensus       108 ~~~~~~~~~~~~~~~DvVi~~~d---------~~--------~~~~~l~~~~~~~~~p~i~~~~~g  156 (249)
T 1jw9_B          108 ALLDDAELAALIAEHDLVLDCTD---------NV--------AVRNQLNAGCFAAKVPLVSGAAIR  156 (249)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS---------SH--------HHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred             ccCCHhHHHHHHhCCCEEEEeCC---------CH--------HHHHHHHHHHHHcCCCEEEeeecc
Confidence            555432    3567999998753         11        112345566777777777765543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.12  E-value=0.0012  Score=60.30  Aligned_cols=94  Identities=12%  Similarity=0.086  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcc---cCC-CCeEEEEcccccccccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH---FGN-PNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~-~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      +++|.|.||+|.+|+.+++.|.++.. +++.+.+.... ...+...   +.. ..+.+...|    .+.++|+||.+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~~~~~~g~~~~~~~~~~----~~~~vDvV~~a~g~   78 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFVHPNLRGRTNLKFVPPE----KLEPADILVLALPH   78 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGTCGGGTTTCCCBCBCGG----GCCCCSEEEECCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHhCchhcCcccccccchh----HhcCCCEEEEcCCc
Confidence            46899999999999999999998765 77776543211 1111111   111 222222222    24689999999873


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      .                  ....+...+.+.|+++|-.|+..
T Consensus        79 ~------------------~s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           79 G------------------VFAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             T------------------HHHHTHHHHHTTCSEEEECSSTT
T ss_pred             H------------------HHHHHHHHHHHCCCEEEEcCccc
Confidence            1                  13445666777888988888853

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.11  E-value=0.00021  Score=56.49  Aligned_cols=70  Identities=16%  Similarity=0.224  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      +++|+|.|+ |.+|..++..|.+.|++|++++|+..+..+..... +   +.....+-.++.+.++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-~---~~~~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-E---YEYVLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-T---CEEEECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-C---CceEeecCHHHHhcCCCEEEEeCCC
Confidence            689999995 99999999999999999888887543322222211 2   3333444444556789999998874

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.09  E-value=0.0024  Score=57.38  Aligned_cols=104  Identities=18%  Similarity=0.201  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc---C--CCCeEEEEcccccccccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF---G--NPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~---~--~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      +.++|.|+|+ |.+|..++..|+..|.  +|+++|++....+....++.   .  ...+.+...|  .+.+.++|+||.+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--~~al~~aDvViia   81 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD--YDDCRDADLVVIC   81 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC--GGGTTTCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCc--HHHhCCCCEEEEc
Confidence            3468999998 9999999999988774  89999986432221111111   1  1134444322  3568899999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA  223 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~  223 (290)
                      ++......  .+-.+.+..|..-...+.+.+.+...
T Consensus        82 ~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p  115 (316)
T 1ldn_A           82 AGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGF  115 (316)
T ss_dssp             CSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCC
Confidence            98643222  23345567888888888888777653

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.07  E-value=0.0061  Score=54.65  Aligned_cols=109  Identities=13%  Similarity=0.031  Sum_probs=69.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcc------c-CCCCeEEEEcccccccccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH------F-GNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~------~-~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      .++|.|.|+ |.+|..++..|++.|+ +|++++++.+.........      . ...++... .|.  +.+.++|+||-+
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~--~a~~~aDiVi~a   79 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DDY--ADISGSDVVIIT   79 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CCH--HHhCCCCEEEEe
Confidence            468999997 9999999999999998 9999998653332211111      0 11233322 344  467889999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      ++...  .....-.+.+..|......+++.+.+...  .++.+|.
T Consensus        80 vg~p~--~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           80 ASIPG--RPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             CCCSS--CCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCCCC--CCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            98532  22233344556677777777777765543  4555554

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.06  E-value=0.0045  Score=55.28  Aligned_cols=103  Identities=18%  Similarity=0.171  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchh-hh--hcccC-CCCeEEEEc-ccccccccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE-NV--MHHFG-NPNFELIRH-DVVEPLLLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~-~~--~~~~~-~~~v~~~~~-D~~~~~~~~vD~vih~  187 (290)
                      ++++|.|.|+ |.+|..++..|++.|+  +|++++++...... ..  .+... .....+... |  .+.+.++|+||-+
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~aD~Vii~   82 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD--PEICRDADMVVIT   82 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC--GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC--HHHhCCCCEEEEC
Confidence            3468999997 9999999999999998  99999985322210 11  11110 012232222 3  2456789999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG  222 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~  222 (290)
                      ++..  .....+..+.+..|+.....+++.+.+.+
T Consensus        83 v~~~--~~~g~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           83 AGPR--QKPGQSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             CCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8742  22234456677888888888888776654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.06  E-value=0.0026  Score=57.23  Aligned_cols=107  Identities=13%  Similarity=0.090  Sum_probs=68.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhc---ccC-CCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMH---HFG-NPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~---~~~-~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.|.|+ |.+|..++..|++.|+  +|++++++..........   ... .....+...|  .+.+.++|+||-+++.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d--~~~~~~aDvViiav~~   77 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAGV   77 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC--HHHhCCCCEEEEccCC
Confidence            47999997 9999999999999998  999999863222211111   000 0122232234  3457789999999874


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT  228 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~v  228 (290)
                      ..  .....-.+....|+.-...+++.+.+...  .+|.+
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           78 PQ--KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             CC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            32  12223456677888888888888776543  44444

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.05  E-value=0.0036  Score=56.10  Aligned_cols=108  Identities=12%  Similarity=0.100  Sum_probs=73.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-----CCCCeEEEE-cccccccccCCCEEEEcccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELIR-HDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~-~D~~~~~~~~vD~vih~Ag~  190 (290)
                      +|.|+|| |.+|..++..|+..|. +|+++|++..+.+....++.     ......+.. .|.  +.+.++|+||-.+|.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~~ag~   77 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY--EDMRGSDIVLVTAGI   77 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG--GGGTTCSEEEECCSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH--HHhCCCCEEEEeCCC
Confidence            4889997 9999999999998887 69999986433322222211     112333333 453  578899999999986


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      .  .....+-.+.+..|+.-...+++.+.+...  .++++|-
T Consensus        78 ~--~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           78 G--RKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             C--CCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             C--CCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            3  333345567788899999999998877653  5666543

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.99  E-value=0.0095  Score=53.23  Aligned_cols=108  Identities=19%  Similarity=0.187  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcc--cCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .+++|.|+|| |.+|..++..|+.+|.  +|+++|++.. ......++  ....++... .|.  +.+.++|+||-.+|.
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t-~d~--~~l~~aD~Vi~aag~   87 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEIS-KDL--SASAHSKVVIFTVNS   87 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEEE-SCG--GGGTTCSEEEECCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEe-CCH--HHHCCCCEEEEcCCC
Confidence            4578999995 9999999999999998  8999998653 22111111  223355553 564  568899999999987


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS  230 (290)
                      .   .....-.+.+..|+.-...+.+.+.+...  .++++|-
T Consensus        88 ~---~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           88 L---GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             C---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            3   22344566778888888888888876543  4555544

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.99  E-value=0.0018  Score=50.76  Aligned_cols=68  Identities=16%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      .++|+|.| .|.+|..+++.|.+.|++|++++++.    +.+.... ...+.++.+|.+++.      ..+.|.||-+.+
T Consensus         7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~----~~~~~~~-~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSR----TRVDELR-ERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCH----HHHHHHH-HTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCH----HHHHHHH-HcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            35799999 59999999999999999999999753    2222221 246778889988764      346899997654

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.96  E-value=0.0033  Score=56.17  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=64.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcc---c--CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHH---F--GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~---~--~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|.| +|.+|..++..|++.|  ++|++++++...........   .  ....+.+...|.  +.+.++|+||-+++
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~--~~~~~aDvViiav~   78 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW--AALADADVVISTLG   78 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG--GGGTTCSEEEECCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH--HHhCCCCEEEEecC
Confidence            6899999 8999999999999999  79999998643222211111   0  112344434454  56778999999887


Q ss_pred             CCCCCC--CCCChHHHHHHHHHHHHHHHHHHHHcC
Q 022900          190 PASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRVG  222 (290)
Q Consensus       190 ~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~~  222 (290)
                      ......  ...+-.+....|+.-...+++.+.+..
T Consensus        79 ~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~  113 (309)
T 1hyh_A           79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG  113 (309)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHTT
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            422100  111222356678777778888776654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.96  E-value=0.00026  Score=64.50  Aligned_cols=72  Identities=19%  Similarity=0.202  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---cccccc----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEPL----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~~----~~~vD~vih  186 (290)
                      ..+++|+|+||+|.||..++..+...|++|++++++..+. +.+.+. +. . .+++.   |..+..    -.++|++|+
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~l-Ga-~-~~~~~~~~~~~~~~~~~~~~g~Dvvid  241 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-EACERL-GA-K-RGINYRSEDFAAVIKAETGQGVDIILD  241 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHH-TC-S-EEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc-CC-C-EEEeCCchHHHHHHHHHhCCCceEEEE
Confidence            3578999999999999999999999999999998753222 222222 21 1 12221   111111    136999999


Q ss_pred             ccc
Q 022900          187 LAC  189 (290)
Q Consensus       187 ~Ag  189 (290)
                      |+|
T Consensus       242 ~~g  244 (353)
T 4dup_A          242 MIG  244 (353)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.95  E-value=0.00024  Score=64.10  Aligned_cols=72  Identities=24%  Similarity=0.234  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---ccccc---c--ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEP---L--LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~---~--~~~vD~vi  185 (290)
                      ..+++|+|+||+|.||...+..+...|++|++++++..+. +...+. + .. .+++.   |..+.   .  -.++|++|
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~-g-a~-~~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL-KIAKEY-G-AE-YLINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT-T-CS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc-C-Cc-EEEeCCCchHHHHHHHHhCCCCceEEE
Confidence            4578999999999999999999999999999998743222 222221 2 11 12222   11111   1  13599999


Q ss_pred             Eccc
Q 022900          186 HLAC  189 (290)
Q Consensus       186 h~Ag  189 (290)
                      +|+|
T Consensus       223 d~~g  226 (334)
T 3qwb_A          223 DSVG  226 (334)
T ss_dssp             ECCG
T ss_pred             ECCC
Confidence            9998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.94  E-value=0.00058  Score=61.50  Aligned_cols=76  Identities=9%  Similarity=-0.014  Sum_probs=49.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC---CCchhhhhcccC--CCCeEEEEcccc---cccccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF---TGRKENVMHHFG--NPNFELIRHDVV---EPLLLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~---~~~~~~~~~~~~--~~~v~~~~~D~~---~~~~~~vD~v  184 (290)
                      ..+++++|+|+ |++|++++..|.+.|. +|+++.|..   .+..+...+...  ...+..+..+-.   .+.+.+.|+|
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            57889999996 9999999999999998 899998862   222222221111  122334433221   2335679999


Q ss_pred             EEcccC
Q 022900          185 YHLACP  190 (290)
Q Consensus       185 ih~Ag~  190 (290)
                      ||+...
T Consensus       225 INaTp~  230 (312)
T 3t4e_A          225 TNGTKV  230 (312)
T ss_dssp             EECSST
T ss_pred             EECCcC
Confidence            998654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.93  E-value=0.00049  Score=62.39  Aligned_cols=72  Identities=24%  Similarity=0.244  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcc--cccc---cc--cCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD--VVEP---LL--LEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D--~~~~---~~--~~vD~vih  186 (290)
                      ..+++|+|+||+|.||...+..+...|++|++++++..+. +.+.+. +..  .+++.+  +.+.   ..  .++|++|+
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~-ga~--~v~~~~~~~~~~v~~~~~~~g~Dvvid  233 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSV-GAD--IVLPLEEGWAKAVREATGGAGVDMVVD  233 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH-TCS--EEEESSTTHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc-CCc--EEecCchhHHHHHHHHhCCCCceEEEE
Confidence            3578999999999999999999999999999998754332 222222 221  122222  2111   11  25999999


Q ss_pred             ccc
Q 022900          187 LAC  189 (290)
Q Consensus       187 ~Ag  189 (290)
                      |+|
T Consensus       234 ~~g  236 (342)
T 4eye_A          234 PIG  236 (342)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            998

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.93  E-value=0.0048  Score=56.66  Aligned_cols=92  Identities=15%  Similarity=0.185  Sum_probs=57.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC---eEEEEe-CCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD---SVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~-r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~  192 (290)
                      ++|.|.||||++|..|++.|.++++   ++..+. +......-.    +...+..+..  +....+.++|+||-|++.  
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~----~~~~~~~~~~--~~~~~~~~~Dvvf~a~~~--   74 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK----FKDQDITIEE--TTETAFEGVDIALFSAGS--   74 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE----ETTEEEEEEE--CCTTTTTTCSEEEECSCH--
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce----ecCCCceEee--CCHHHhcCCCEEEECCCh--
Confidence            5899999999999999999998765   334443 211111111    1222233333  333456789999998862  


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                      ..+......+.+.|+++|=.|+..
T Consensus        75 ----------------~~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           75 ----------------STSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ----------------HhHHHHHHHHHHCCCEEEEcCCcc
Confidence                            113345555667788888888864

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.92  E-value=0.00053  Score=62.89  Aligned_cols=74  Identities=23%  Similarity=0.317  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcc--cccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD--VVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D--~~~~~~~~vD~vih~Ag~  190 (290)
                      .++++|+|+|+ |.+|..++..+...|++|++++|+..+... +.+... ..+..+..+  -..+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHhhC-ceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            44589999998 999999999999999999999985432222 221111 122222211  122345689999999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.90  E-value=0.00047  Score=62.36  Aligned_cols=72  Identities=13%  Similarity=0.100  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---cccccc-----ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEPL-----LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~~-----~~~vD~vi  185 (290)
                      ..+++|+|+||+|.||...+..+...|++|++++++..+. +.+.+. +. . .+++.   |+.+..     -.++|++|
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~l-ga-~-~~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT-EELLRL-GA-A-YVIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHH-TC-S-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhC-CC-c-EEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            4578999999999999999988888899999999865433 223222 21 1 12221   221111     13699999


Q ss_pred             Eccc
Q 022900          186 HLAC  189 (290)
Q Consensus       186 h~Ag  189 (290)
                      +|+|
T Consensus       219 d~~g  222 (340)
T 3gms_A          219 DSIG  222 (340)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.89  E-value=0.00063  Score=60.23  Aligned_cols=69  Identities=17%  Similarity=0.126  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .++++++|+|+ |++|++++..|.+.|+ +|++++|+.++..+..    .  .+.....+-..+.+.+.|+|||+..
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la----~--~~~~~~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS----L--NINKINLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC----S--CCEEECHHHHHHTGGGCSEEEECCC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH----H--hcccccHhhHHHHhcCCCEEEECcc
Confidence            46789999995 8999999999999998 8999987543322211    1  2333333333344667999999865

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.84  E-value=0.00037  Score=63.24  Aligned_cols=73  Identities=23%  Similarity=0.266  Sum_probs=47.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---cc---ccccc--cCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DV---VEPLL--LEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~---~~~~~--~~vD~v  184 (290)
                      ..+++|+|+||+|.||..++..+... |++|++++++..+. +.+.+. +. . .+++.   |.   ..+..  .++|++
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~-~~~~~~-g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRA-GA-D-YVINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHH-TC-S-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHh-CC-C-EEecCCCccHHHHHHHHhcCCCceEE
Confidence            35789999999999999999999998 99999998753222 222222 21 1 11221   11   11111  479999


Q ss_pred             EEcccC
Q 022900          185 YHLACP  190 (290)
Q Consensus       185 ih~Ag~  190 (290)
                      |+|+|.
T Consensus       245 i~~~g~  250 (347)
T 1jvb_A          245 IDLNNS  250 (347)
T ss_dssp             EESCCC
T ss_pred             EECCCC
Confidence            999983

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.84  E-value=0.0017  Score=55.66  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=59.3

Q ss_pred             CCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       109 p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |.-...++++|+|.| .|-+|...++.|++.|++|++++...   .+.+..+....++.++..+..+..+.++|.||-+.
T Consensus        24 Pifl~L~gk~VLVVG-gG~va~~ka~~Ll~~GA~VtVvap~~---~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT   99 (223)
T 3dfz_A           24 TVMLDLKGRSVLVVG-GGTIATRRIKGFLQEGAAITVVAPTV---SAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVAT   99 (223)
T ss_dssp             EEEECCTTCCEEEEC-CSHHHHHHHHHHGGGCCCEEEECSSC---CHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECC
T ss_pred             ccEEEcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCC---CHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECC
Confidence            444568899999999 58999999999999999999998642   23333343456788888888888888999999543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.83  E-value=0.00033  Score=62.97  Aligned_cols=36  Identities=28%  Similarity=0.218  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+|+||+|.||...+..+...|++|++++++
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~  174 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSS  174 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999999999999999998899999999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.81  E-value=0.00066  Score=60.30  Aligned_cols=71  Identities=18%  Similarity=0.137  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccc---ccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---VEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~---~~~~~~~vD~vih~Ag  189 (290)
                      ..+++|+|+||+|.+|..++..+...|++|++++++..+... +.+. +. . .+++.+-   ..+.+.++|++|+ +|
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~-ga-~-~~~~~~~~~~~~~~~~~~d~vid-~g  197 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLAL-GA-E-EAATYAEVPERAKAWGGLDLVLE-VR  197 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHHT-TC-S-EEEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhc-CC-C-EEEECCcchhHHHHhcCceEEEE-CC
Confidence            357899999999999999999998999999999985433322 2222 21 1 1222111   1112267999999 87

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.77  E-value=0.00045  Score=62.55  Aligned_cols=36  Identities=19%  Similarity=0.154  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+|+||+|.||..++..+...|++|++++++
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~  200 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS  200 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899999999999999999999999999999875

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.75  E-value=0.0036  Score=55.07  Aligned_cols=65  Identities=17%  Similarity=0.095  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      +++++|+|+ |+.|++++..|.+.|.+|+++.|..++..+.. +. +   +.....+-    +.+.|+|||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~-~---~~~~~~~~----l~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL-G---CDCFMEPP----KSAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH-T---CEEESSCC----SSCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC-C---CeEecHHH----hccCCEEEEcccC
Confidence            789999995 99999999999999999999998765544433 22 2   33332221    2289999998654

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.74  E-value=0.0028  Score=57.49  Aligned_cols=95  Identities=20%  Similarity=0.145  Sum_probs=56.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHY  196 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~~  196 (290)
                      ++|.|.||+|.+|+.+++.|.++++.+..+............-.+....+.+...|..  .+ ++|+||-|.|..     
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~~~--~~-~~DvV~~a~g~~-----   72 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEG--PL-PVDLVLASAGGG-----   72 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECCSS--CC-CCSEEEECSHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCChh--hc-CCCEEEECCCcc-----
Confidence            3699999999999999999998776433221100001000000012234555555532  35 899999988721     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          197 KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                   -+........+.|+++|-.|+..
T Consensus        73 -------------~s~~~a~~~~~~G~~vId~s~~~   95 (331)
T 2yv3_A           73 -------------ISRAKALVWAEGGALVVDNSSAW   95 (331)
T ss_dssp             -------------HHHHHHHHHHHTTCEEEECSSSS
T ss_pred             -------------chHHHHHHHHHCCCEEEECCCcc
Confidence                         12344555567788888888863

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.72  E-value=0.0074  Score=55.09  Aligned_cols=96  Identities=13%  Similarity=0.100  Sum_probs=56.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCC----------CCeEEEEccccccccc-CCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGN----------PNFELIRHDVVEPLLL-EVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~----------~~v~~~~~D~~~~~~~-~vD~v  184 (290)
                      ++|.|.||+|.+|+.+++.|.+++ .+|+++.++.......+......          .++.+...|..+ ... ++|+|
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~DvV   87 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKH-EEFEDVDIV   87 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTS-GGGTTCCEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHH-HhcCCCCEE
Confidence            589999999999999999998875 47777754211111111111110          112222223322 224 89999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      |-+.+..                  ....+...+.+.|+++|-.|+.
T Consensus        88 ~~atp~~------------------~~~~~a~~~~~aG~~VId~s~~  116 (354)
T 1ys4_A           88 FSALPSD------------------LAKKFEPEFAKEGKLIFSNASA  116 (354)
T ss_dssp             EECCCHH------------------HHHHHHHHHHHTTCEEEECCST
T ss_pred             EECCCch------------------HHHHHHHHHHHCCCEEEECCch
Confidence            9887621                  1334556667788887777665

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.69  E-value=0.00059  Score=62.39  Aligned_cols=36  Identities=22%  Similarity=0.177  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+|+||+|.||..++..+...|++|++++++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~  197 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS  197 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC
Confidence            357899999999999999999999999999999874

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.68  E-value=0.012  Score=53.41  Aligned_cols=97  Identities=12%  Similarity=0.112  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCC--CCchhhhhcc---cCC-CCeEEEEc-ccccccc-cCCCEEEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFF--TGRKENVMHH---FGN-PNFELIRH-DVVEPLL-LEVDQIYH  186 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~--~~~~~~~~~~---~~~-~~v~~~~~-D~~~~~~-~~vD~vih  186 (290)
                      |++|.|.||+|++|..+++.|.+. ..++..+....  ......+.+.   +.. .+..+... |  .+.+ .++|+||-
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~--~~~~~~~~Dvvf~   81 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSD--ISEFSPGVDVVFL   81 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESS--GGGTCTTCSEEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCC--HHHHhcCCCEEEE
Confidence            578999999999999999999985 45777664322  0111111111   111 13333332 2  2234 68999998


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      |.+.                  .-+......+.+.|+++|-.|+..
T Consensus        82 a~p~------------------~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           82 ATAH------------------EVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             CSCH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             CCCh------------------HHHHHHHHHHHHCCCEEEEcCCcc
Confidence            8752                  113345556667888999999863

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.67  E-value=0.0011  Score=61.26  Aligned_cols=74  Identities=16%  Similarity=0.113  Sum_probs=49.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEE--cccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR--HDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~--~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|+|+ |.||..+++.+...|++|++++++..+.. .+....+ ..+....  .+-.++.+.++|+||++++.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~-~~~~~~g-~~~~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLR-QLDAEFC-GRIHTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTT-TSSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHHhcC-CeeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence            56789999997 99999999999999999999997532221 1222112 1222211  11123445679999998874

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.66  E-value=0.0059  Score=55.68  Aligned_cols=95  Identities=12%  Similarity=0.138  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEe--CCCCCchhhhhcccC----------CCCeEEEEcccccccccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD--NFFTGRKENVMHHFG----------NPNFELIRHDVVEPLLLEV  181 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~--r~~~~~~~~~~~~~~----------~~~v~~~~~D~~~~~~~~v  181 (290)
                      ++++|.|.||+|.+|+.+++.|.+... +++++.  +.....  .+.....          ..++.+.+.|.  +.+.++
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~v   78 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGK--KYKDAVKWIEQGDIPEEVQDLPIVSTNY--EDHKDV   78 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTS--BHHHHCCCCSSSSCCHHHHTCBEECSSG--GGGTTC
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCC--CHHHhcCcccccccccCCceeEEeeCCH--HHhcCC
Confidence            346899999999999999999987643 777774  211111  1111111          01223333232  334689


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      |+||-|.+.                  ..+..+...+.+.|+++|-.|+.
T Consensus        79 DvVf~atp~------------------~~s~~~a~~~~~aG~~VId~s~~  110 (350)
T 2ep5_A           79 DVVLSALPN------------------ELAESIELELVKNGKIVVSNASP  110 (350)
T ss_dssp             SEEEECCCH------------------HHHHHHHHHHHHTTCEEEECSST
T ss_pred             CEEEECCCh------------------HHHHHHHHHHHHCCCEEEECCcc
Confidence            999987752                  01445667778888887777765

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.64  E-value=0.0017  Score=59.48  Aligned_cols=72  Identities=25%  Similarity=0.282  Sum_probs=47.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---ccccc--cccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEP--LLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~--~~~~vD~vih~A  188 (290)
                      ..+.+|+|+||+|.||...+..+...|++|+++++  +.+.+.+.+. +. . .+++.   |+.+.  ...++|++|+++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~--~~~~~~~~~l-Ga-~-~v~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS--QDASELVRKL-GA-D-DVIDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC--GGGHHHHHHT-TC-S-EEEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC--hHHHHHHHHc-CC-C-EEEECCchHHHHHHhhcCCCCEEEECC
Confidence            45789999999999999999888889999998874  2233333222 21 1 12221   11111  124699999999


Q ss_pred             cC
Q 022900          189 CP  190 (290)
Q Consensus       189 g~  190 (290)
                      |.
T Consensus       257 g~  258 (375)
T 2vn8_A          257 GG  258 (375)
T ss_dssp             CT
T ss_pred             CC
Confidence            84

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.62  E-value=0.0012  Score=60.31  Aligned_cols=72  Identities=19%  Similarity=0.211  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcc---cccccccCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD---VVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D---~~~~~~~~vD~vih~Ag~  190 (290)
                      .+.+|+|+|+ |.||..++..+...|++|++++++..+........ +..  .+++.+   ...+...++|+||+++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-Ga~--~v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-GAD--SFLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-CCS--EEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-CCc--eEEeccCHHHHHHhhCCCCEEEECCCc
Confidence            6789999995 99999999999889999999987543322211122 211  122221   112223579999999984

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.61  E-value=0.0059  Score=56.37  Aligned_cols=108  Identities=14%  Similarity=0.142  Sum_probs=58.4

Q ss_pred             CCCCCCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEE--eCCCCCch-hhhhcccC-------CCCeEEEEccc
Q 022900          105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVV--DNFFTGRK-ENVMHHFG-------NPNFELIRHDV  173 (290)
Q Consensus       105 ~~~~p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~--~r~~~~~~-~~~~~~~~-------~~~v~~~~~D~  173 (290)
                      ++-+|....+++++|.|.||||++|..+++.|.++.. ++..+  ++.....+ ........       ..+..+...| 
T Consensus         8 ~~~~~~~~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~-   86 (381)
T 3hsk_A            8 SGLVPRGSHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECK-   86 (381)
T ss_dssp             ----------CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESS-
T ss_pred             cccccccccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCc-
Confidence            3344444445667899999999999999998887753 66544  23222221 11100000       0122233322 


Q ss_pred             ccc-cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          174 VEP-LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       174 ~~~-~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                       .. .+.++|+||-|.+.                  .-+..+...+.+.|+++|=.|+..
T Consensus        87 -~~~~~~~~Dvvf~alp~------------------~~s~~~~~~~~~~G~~VIDlSa~f  127 (381)
T 3hsk_A           87 -PEGNFLECDVVFSGLDA------------------DVAGDIEKSFVEAGLAVVSNAKNY  127 (381)
T ss_dssp             -SCTTGGGCSEEEECCCH------------------HHHHHHHHHHHHTTCEEEECCSTT
T ss_pred             -hhhhcccCCEEEECCCh------------------hHHHHHHHHHHhCCCEEEEcCCcc
Confidence             22 46789999988762                  013345555667788888888864

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.57  E-value=0.014  Score=53.21  Aligned_cols=102  Identities=18%  Similarity=0.190  Sum_probs=64.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~  169 (290)
                      .+++++|+|.| .|++|.++++.|+..|. +++++|+..-...                      +.+..+...-+++.+
T Consensus       115 ~L~~~~VlvvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            35678999999 58999999999999997 7888887531111                      011111123346666


Q ss_pred             Eccccccc----ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          170 RHDVVEPL----LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       170 ~~D~~~~~----~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      ..++.+..    +.++|+||.+..         ++..       .-..+-++|.+.++.+|..+..
T Consensus       194 ~~~i~~~~~~~~~~~~DlVvd~~D---------n~~~-------~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          194 ALNINDYTDLHKVPEADIWVVSAD---------HPFN-------LINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             ECCCCSGGGGGGSCCCSEEEECCC---------CSTT-------HHHHHHHHHHHTTCCEEEEEEE
T ss_pred             ecccCchhhhhHhccCCEEEEecC---------ChHH-------HHHHHHHHHHHhCCCEEEEEEe
Confidence            66554333    678999998653         1110       1123456788888877776543

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.56  E-value=0.0034  Score=55.33  Aligned_cols=36  Identities=19%  Similarity=0.481  Sum_probs=28.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEE-eCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~  149 (290)
                      +++++|.|.|++|.+|+.+++.+.+. +.+++++ ++.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~   42 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRT   42 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            35679999999999999999999876 5577764 554

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.54  E-value=0.0042  Score=56.90  Aligned_cols=95  Identities=15%  Similarity=0.210  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcc---cCCCC-eEEEEcccccccccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH---FGNPN-FELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~-v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++++|.|.||+|.+|+.+++.|.++.. +++++...... ...+...   +.... .++...+  ++.+.++|+||.|++
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCC
Confidence            446899999999999999999998865 77777543211 1111111   11110 0111112  334457999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      ...                  +......+ +.|+++|-.|+.
T Consensus        92 ~~~------------------s~~~a~~~-~aG~~VId~sa~  114 (359)
T 1xyg_A           92 HGT------------------TQEIIKEL-PTALKIVDLSAD  114 (359)
T ss_dssp             TTT------------------HHHHHHTS-CTTCEEEECSST
T ss_pred             chh------------------HHHHHHHH-hCCCEEEECCcc
Confidence            321                  23445556 677888888875

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.53  E-value=0.0043  Score=55.20  Aligned_cols=102  Identities=17%  Similarity=0.217  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCC----------------ch-----hhhhcccCCCCeEEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG----------------RK-----ENVMHHFGNPNFELI  169 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~----------------~~-----~~~~~~~~~~~v~~~  169 (290)
                      .++++++|+|.| .|++|.++++.|+..|. +++++|...-.                .+     +.+..+...-+++.+
T Consensus        32 ~kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            346678999999 79999999999999996 78888765310                00     111111123345566


Q ss_pred             Eccccc-c----cc-----------cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 022900          170 RHDVVE-P----LL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (290)
Q Consensus       170 ~~D~~~-~----~~-----------~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~  231 (290)
                      ..++.+ +    .+           .++|+||.+..                 |...-..+-++|.+.++.+|+.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-----------------n~~~R~~in~~c~~~~~Pli~~gv~  171 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-----------------NFEARMTINTACNELGQTWMESGVS  171 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-----------------SHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc-----------------chhhhhHHHHHHHHhCCCEEEeeee
Confidence            555543 1    11           47899997653                 2222334566788888878776543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.53  E-value=0.0062  Score=52.86  Aligned_cols=103  Identities=10%  Similarity=0.093  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc-----------------h-hh----hhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-----------------K-EN----VMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-----------------~-~~----~~~~~~~~~v~~~~  170 (290)
                      +.+++|+|.| .|++|.++++.|+..|. +++++|+..-..                 + +.    +.++...-+++.+.
T Consensus        26 l~~~~VlvvG-~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIG-LGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEEC-CSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEc-cCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            5568999999 57899999999999997 677876542110                 0 00    01111122355555


Q ss_pred             cccccc----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Q 022900          171 HDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (290)
Q Consensus       171 ~D~~~~----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vy  234 (290)
                      .++.++    .+.++|+||++..         +.        ..-..+-++|.+.++.+|..+....+
T Consensus       105 ~~~~~~~~~~~~~~~DvVi~~~d---------~~--------~~r~~l~~~~~~~~~p~i~~~~~g~~  155 (251)
T 1zud_1          105 QRLTGEALKDAVARADVVLDCTD---------NM--------ATRQEINAACVALNTPLITASAVGFG  155 (251)
T ss_dssp             SCCCHHHHHHHHHHCSEEEECCS---------SH--------HHHHHHHHHHHHTTCCEEEEEEEBTE
T ss_pred             ccCCHHHHHHHHhcCCEEEECCC---------CH--------HHHHHHHHHHHHhCCCEEEEeccccc
Confidence            444432    3456899998753         11        12234556677777777777665433

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.50  E-value=0.0034  Score=55.66  Aligned_cols=68  Identities=22%  Similarity=0.193  Sum_probs=47.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++++|+|+ |+.|++++..|.+.|. +|+++.|..++.    ..+..  ++..+..+-.++ + +.|+|||+...
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka----~~La~--~~~~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKT----SEIYG--EFKVISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHH----HHHCT--TSEEEEHHHHTT-C-CCSEEEECSST
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH----HHHHH--hcCcccHHHHHh-c-cCCEEEECCcc
Confidence            56889999995 8999999999999998 899998754322    22211  222333333333 4 89999998753

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.46  E-value=0.015  Score=52.87  Aligned_cols=104  Identities=13%  Similarity=0.221  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCc-----------------h-----hhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-----------------K-----ENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-----------------~-----~~~~~~~~~~~v~~~~  170 (290)
                      +.+.+|+|.| .|++|.++++.|+..|. +++++|...-..                 +     +.+.++...-+++.+.
T Consensus        34 L~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            4567999999 68999999999999998 788886431000                 0     0111111223455665


Q ss_pred             cccc---cccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          171 HDVV---EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       171 ~D~~---~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      .++.   ++.+.++|+||.+..                 |...-..+-++|.+.++.+|..++.+.+|
T Consensus       113 ~~~~~~~~~~~~~~dvVv~~~d-----------------~~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          113 EDIEKKPESFFTQFDAVCLTCC-----------------SRDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             SCGGGCCHHHHTTCSEEEEESC-----------------CHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             cccCcchHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            5553   334567999998642                 12223346667888888888887777665

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.45  E-value=0.0036  Score=53.26  Aligned_cols=66  Identities=6%  Similarity=-0.064  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      .++|+|+|+ |.+|..+++.|.++|+ |++++++.    +.+....  ..+.++.+|.+++.      +.++|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~----~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDEN----VRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGG----GHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCH----HHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            468999996 9999999999999999 99997642    2222222  45788999988763      457899997654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.44  E-value=0.0015  Score=59.59  Aligned_cols=70  Identities=13%  Similarity=0.108  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC---CCchhhhhcccCCCCeEEEEc-cccccc---ccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF---TGRKENVMHHFGNPNFELIRH-DVVEPL---LLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~v~~~~~-D~~~~~---~~~vD~vih~  187 (290)
                      ++++|+|+|| |.||..++..+...|++|++++++.   .+. +.+.+. +   ++.++. |+.+..   -.++|+||++
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~-g---a~~v~~~~~~~~~~~~~~~~d~vid~  253 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET-K---TNYYNSSNGYDKLKDSVGKFDVIIDA  253 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH-T---CEEEECTTCSHHHHHHHCCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh-C---CceechHHHHHHHHHhCCCCCEEEEC
Confidence            3889999999 9999999999888999999998754   221 222221 2   222211 221111   1469999999


Q ss_pred             ccC
Q 022900          188 ACP  190 (290)
Q Consensus       188 Ag~  190 (290)
                      +|.
T Consensus       254 ~g~  256 (366)
T 2cdc_A          254 TGA  256 (366)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.42  E-value=0.0015  Score=59.14  Aligned_cols=70  Identities=14%  Similarity=0.085  Sum_probs=46.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---cccccc---c--cCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEPL---L--LEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~~---~--~~vD~vih~  187 (290)
                      +++|+|+||+|.||...+..+...|++|++++++..+. +.+.+. +..  .+++.   |+.+..   .  .++|++|+|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~~-Ga~--~~~~~~~~~~~~~v~~~~~~~g~D~vid~  240 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-ALLKDI-GAA--HVLNEKAPDFEATLREVMKAEQPRIFLDA  240 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH-HHHHHH-TCS--EEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc-CCC--EEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence            47999999999999999988888899999998754332 222222 211  12222   111111   1  369999999


Q ss_pred             cc
Q 022900          188 AC  189 (290)
Q Consensus       188 Ag  189 (290)
                      +|
T Consensus       241 ~g  242 (349)
T 3pi7_A          241 VT  242 (349)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.37  E-value=0.033  Score=52.91  Aligned_cols=36  Identities=19%  Similarity=0.087  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CC-eEEEEeCCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFT  151 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~-G~-~V~~~~r~~~  151 (290)
                      +.|+|.|.| .|++|..++..|++. |+ +|++++++..
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            457899998 899999999999999 99 9999998765

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.33  E-value=0.0017  Score=58.84  Aligned_cols=35  Identities=31%  Similarity=0.337  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+.+|+|+||+|.||...+..+...|++|++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~  184 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR  184 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999999888899999999864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.33  E-value=0.0016  Score=58.39  Aligned_cols=71  Identities=20%  Similarity=0.254  Sum_probs=47.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccc---ccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---VEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~---~~~~~~~vD~vih~Ag  189 (290)
                      ..+.+|+|+||+|.+|...+..+...|++|+++++..  ..+.+.+. +..  .+++.+-   ..+...++|++|.+.|
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~--~~~~~~~l-Ga~--~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR--NHAFLKAL-GAE--QCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH--HHHHHHHH-TCS--EEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc--hHHHHHHc-CCC--EEEeCCCcchhhhhccCCCEEEECCC
Confidence            4578999999999999999999888999999887421  22222222 221  1222211   2233467999999987

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.31  E-value=0.0076  Score=53.55  Aligned_cols=72  Identities=15%  Similarity=0.156  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ...+++|.|.| .|.||+.+++.|...|.+|++.+|+..+.. ...+    ..++.+..+-.++.+.+.|+||.+...
T Consensus       154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~-~~~~----~g~~~~~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          154 TIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLA-RITE----MGLVPFHTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             CSTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHH----TTCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH----CCCeEEchhhHHHHhhCCCEEEECCCh
Confidence            46789999999 599999999999999999999998532211 1111    123333334345567789999988753

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.29  E-value=0.0032  Score=58.58  Aligned_cols=72  Identities=22%  Similarity=0.321  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|.|+ |.+|..+++.|...|. +|++++|...+..+..... +   .+.+..+-..+.+.++|+||.+.+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-g---~~~~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-G---GEAVRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-T---CEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-C---CceecHHhHHHHhcCCCEEEEccCC
Confidence            46889999996 9999999999999998 8999987532221221111 2   2222222223445689999998763

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.29  E-value=0.0036  Score=50.32  Aligned_cols=65  Identities=14%  Similarity=0.073  Sum_probs=44.1

Q ss_pred             CchHHHHHHHHHHHCCCeEEEEeCCCCCchh---hhhccc-CCCCeEEEEcccccc--c------------ccCCCEEEE
Q 022900          125 AGFVGSHLVDRLIARGDSVIVVDNFFTGRKE---NVMHHF-GNPNFELIRHDVVEP--L------------LLEVDQIYH  186 (290)
Q Consensus       125 sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~-~~~~v~~~~~D~~~~--~------------~~~vD~vih  186 (290)
                      +|.++.++++.|++.|++|++..|.......   ...... .+.++..+.+|+.++  .            +++ |++||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            3678899999999999999988775332211   111111 234577778888776  2            245 99999


Q ss_pred             cccC
Q 022900          187 LACP  190 (290)
Q Consensus       187 ~Ag~  190 (290)
                      |||.
T Consensus       104 nAgg  107 (157)
T 3gxh_A          104 CLAN  107 (157)
T ss_dssp             CSBS
T ss_pred             CCCC
Confidence            9984

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.29  E-value=0.0038  Score=52.75  Aligned_cols=66  Identities=17%  Similarity=0.185  Sum_probs=44.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .+++|.|.| +|.+|..+++.|.+.|++|++++|+.+.    ...... ..+...  |. ++.+.++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~----~~~~~~-~g~~~~--~~-~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKR----TARLFP-SAAQVT--FQ-EEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHH----HHHHSB-TTSEEE--EH-HHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHH-cCCcee--cH-HHHHhCCCEEEECCC
Confidence            456899999 8999999999999999999999875322    221111 133332  22 234567999998764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.24  E-value=0.0064  Score=57.78  Aligned_cols=36  Identities=31%  Similarity=0.217  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+.+|+|+|||++ .||..+++.|...|++|++++++
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~  297 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEID  297 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCC
Confidence            3678999999965 99999999999999999999875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.22  E-value=0.0019  Score=58.49  Aligned_cols=33  Identities=30%  Similarity=0.580  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV  146 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~  146 (290)
                      ..+.+|+|+||+|.||...+..+...|++|+++
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~  181 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT  181 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence            357899999999999999999999999999988

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.15  E-value=0.0042  Score=56.49  Aligned_cols=72  Identities=25%  Similarity=0.201  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc----ccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH----DVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~----D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+.+|+|+|+ |.+|...+..+...|++|++++++..+. +.+.+. +..  .++..    |..+....++|+||.++|
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~-~~~~~l-Ga~--~v~~~~~~~~~~~~~~~~~D~vid~~g  252 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKM-GAD--HYIATLEEGDWGEKYFDTFDLIVVCAS  252 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHH-TCS--EEEEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHc-CCC--EEEcCcCchHHHHHhhcCCCEEEECCC
Confidence            35789999999 9999999888888899999999764433 223222 211  12222    222222247999999998


Q ss_pred             C
Q 022900          190 P  190 (290)
Q Consensus       190 ~  190 (290)
                      .
T Consensus       253 ~  253 (360)
T 1piw_A          253 S  253 (360)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.15  E-value=0.047  Score=49.64  Aligned_cols=93  Identities=22%  Similarity=0.151  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEe-CCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~-r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +++|.|.||||++|..|++.|.++.+   ++..+. +......-.    +...+..+  .|...+.+.++|+||-|.+. 
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~----~~~~~~~~--~~~~~~~~~~~Dvvf~a~~~-   73 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA----FRGQEIEV--EDAETADPSGLDIALFSAGS-   73 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE----ETTEEEEE--EETTTSCCTTCSEEEECSCH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee----ecCCceEE--EeCCHHHhccCCEEEECCCh-
Confidence            35899999999999999999998754   455543 222111111    12222333  23334556789999998862 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                       .-+......+.+.|+++|=.|+..
T Consensus        74 -----------------~~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           74 -----------------AMSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             -----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             -----------------HHHHHHHHHHHhCCCEEEECCCcc
Confidence                             113344555667788888888853

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.13  E-value=0.018  Score=51.70  Aligned_cols=37  Identities=27%  Similarity=0.435  Sum_probs=31.5

Q ss_pred             CCCCE-EEEEcC-C-----------------chHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLR-IVVTGG-A-----------------GFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~-VlVTGa-s-----------------G~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..|++ |+||+| |                 |-.|.++++.++++|+.|+.+.+..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            45666 999875 6                 8899999999999999999998854

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.13  E-value=0.013  Score=51.70  Aligned_cols=37  Identities=24%  Similarity=0.373  Sum_probs=33.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ...+++++|.|+++.+|+.++..|+++|++|+++.+.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999999999999999999999999998753

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.12  E-value=0.02  Score=53.65  Aligned_cols=33  Identities=42%  Similarity=0.556  Sum_probs=29.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.|.| .|.+|..++..|++.|++|++++++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS   33 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4789998 89999999999999999999998753

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.11  E-value=0.01  Score=52.50  Aligned_cols=71  Identities=20%  Similarity=0.149  Sum_probs=50.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ...+++|.|.| .|.||..+++.|...|.+|++.+|+.... +....    ..++.+..+-.++.+.+.|+|+++..
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~-~~~~~----~g~~~~~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLL-ARIAE----MGMEPFHISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH----TTSEEEEGGGHHHHTTTCSEEEECCS
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHH----CCCeecChhhHHHHhcCCCEEEECCC
Confidence            36789999999 69999999999999999999998753221 11111    12334433334555778999998864

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.07  E-value=0.04  Score=47.66  Aligned_cols=32  Identities=25%  Similarity=0.342  Sum_probs=27.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN  148 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r  148 (290)
                      ++|.|.|++|.+|+.+++.+.+. |++++++..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d   33 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELD   33 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEc
Confidence            47999999999999999999876 889887654

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.05  E-value=0.0096  Score=52.47  Aligned_cols=80  Identities=21%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhhccc----------------------CCCC
Q 022900          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF----------------------GNPN  165 (290)
Q Consensus       109 p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~----------------------~~~~  165 (290)
                      |.....++|+|+|.| .|-+|...++.|++.|++|++++....... +.+....                      ...+
T Consensus         6 pl~~~l~~k~VLVVG-gG~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~   84 (274)
T 1kyq_A            6 QLAHQLKDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNE   84 (274)
T ss_dssp             EEEECCTTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCC
T ss_pred             eEEEEcCCCEEEEEC-CcHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCC
Confidence            334557899999999 688999999999999999999976432111 2222221                      2235


Q ss_pred             e-EEEEccccccccc------CCCEEEEccc
Q 022900          166 F-ELIRHDVVEPLLL------EVDQIYHLAC  189 (290)
Q Consensus       166 v-~~~~~D~~~~~~~------~vD~vih~Ag  189 (290)
                      + .++..+..+..+.      ++|.||-+.+
T Consensus        85 i~~~i~~~~~~~dL~~l~~~~~adlViaat~  115 (274)
T 1kyq_A           85 IYEYIRSDFKDEYLDLENENDAWYIIMTCIP  115 (274)
T ss_dssp             CSEEECSSCCGGGGCCSSTTCCEEEEEECCS
T ss_pred             eeEEEcCCCCHHHHhhcccCCCeEEEEEcCC
Confidence            5 7777777666666      7888885543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.03  E-value=0.0065  Score=54.37  Aligned_cols=70  Identities=21%  Similarity=0.169  Sum_probs=43.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCC-eEEEEcc--ccccc-ccCCCEEEEccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHD--VVEPL-LLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-v~~~~~D--~~~~~-~~~vD~vih~Ag  189 (290)
                      +|+|+||+|.+|...+..+...|++|++++++..+. +.+.+. +... ++..+.|  ..... -.++|++|+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-~~~~~l-Ga~~~i~~~~~~~~~~~~~~~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-DYLRVL-GAKEVLAREDVMAERIRPLDKQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-HHHHHT-TCSEEEECC---------CCSCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-CCcEEEecCCcHHHHHHHhcCCcccEEEECCc
Confidence            799999999999999998888999999998864333 223222 2111 1111111  11111 136899999987

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.99  E-value=0.0043  Score=56.42  Aligned_cols=72  Identities=24%  Similarity=0.231  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcc---cccccccCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD---VVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D---~~~~~~~~vD~vih~Ag~  190 (290)
                      .+.+|+|+|+ |.||...+..+...|++|++++++..+... ....++...  ++..+   ...+...++|++|.++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~-~~~~lGa~~--vi~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREE-ALQDLGADD--YVIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHH-HHTTSCCSC--EEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHHcCCce--eeccccHHHHHHhcCCCCEEEECCCC
Confidence            6789999995 999999988887789999999875433222 221122111  12211   112223479999999983

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.98  E-value=0.0038  Score=58.55  Aligned_cols=36  Identities=19%  Similarity=0.278  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+++|+|+||+|.||...+..+...|++|++++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~  254 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS  254 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            457899999999999999999998899999999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.96  E-value=0.0025  Score=57.55  Aligned_cols=71  Identities=21%  Similarity=0.136  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---ccccc---cccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEP---LLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~---~~~~vD~vih~  187 (290)
                      ..+++|+|+|| |.||..++..+...|++|++++++..+. +.+.+ ++. . .+++.   |+.+.   ...++|++|++
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~-lGa-~-~~~d~~~~~~~~~~~~~~~~~d~vid~  237 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKE-LGA-D-LVVNPLKEDAAKFMKEKVGGVHAAVVT  237 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHH-TTC-S-EEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-CCC-C-EEecCCCccHHHHHHHHhCCCCEEEEC
Confidence            35789999999 7799999999989999999998753222 22222 121 1 11211   11111   11479999999


Q ss_pred             cc
Q 022900          188 AC  189 (290)
Q Consensus       188 Ag  189 (290)
                      +|
T Consensus       238 ~g  239 (339)
T 1rjw_A          238 AV  239 (339)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.92  E-value=0.0071  Score=52.64  Aligned_cols=68  Identities=16%  Similarity=0.233  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .++ +++|.| +|++|++++..|.+.|. +|++++|+.+    ....+..  .+.....+-..+...+.|+|||+..
T Consensus       107 ~~~-~vliiG-aGg~a~ai~~~L~~~G~~~I~v~nR~~~----ka~~la~--~~~~~~~~~~~~~~~~aDiVInatp  175 (253)
T 3u62_A          107 VKE-PVVVVG-AGGAARAVIYALLQMGVKDIWVVNRTIE----RAKALDF--PVKIFSLDQLDEVVKKAKSLFNTTS  175 (253)
T ss_dssp             CCS-SEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESCHH----HHHTCCS--SCEEEEGGGHHHHHHTCSEEEECSS
T ss_pred             CCC-eEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHH----HHHHHHH--HcccCCHHHHHhhhcCCCEEEECCC
Confidence            356 899999 59999999999999998 8999987532    2222211  2222333333445668999999764

>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}

Probab=95.90  E-value=0.013  Score=60.65  Aligned_cols=106  Identities=11%  Similarity=0.157  Sum_probs=69.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~  170 (290)
                      +.+.+|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++.+.
T Consensus        25 L~~s~VlIvG-~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lNP~v~v~~~~  103 (1015)
T 3cmm_A           25 MQTSNVLILG-LKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVLD  103 (1015)
T ss_dssp             HTTCEEEEEC-CSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSCTTSCEEECC
T ss_pred             HhcCEEEEEC-CChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHCCCCeEEEec
Confidence            5678999999 68999999999999997 7888865411110                      0111111223566666


Q ss_pred             cccccccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          171 HDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       171 ~D~~~~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      .++..+.+.++|+||.+..                .|...-..+-++|.+.++.+|..++.+.+|.
T Consensus       104 ~~l~~~~l~~~DvVv~~~d----------------~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~  153 (1015)
T 3cmm_A          104 SLDDVTQLSQFQVVVATDT----------------VSLEDKVKINEFCHSSGIRFISSETRGLFGN  153 (1015)
T ss_dssp             CCCCSTTGGGCSEEEECTT----------------SCHHHHHHHHHHHHHHTCEEEEEEEETTEEE
T ss_pred             CCCCHHHHhcCCEEEEcCC----------------CCHHHHHHHHHHHHHcCCCEEEEEecccEEE
Confidence            6666666778999997532                0233334566778888888888887766553

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=95.89  E-value=0.02  Score=53.94  Aligned_cols=33  Identities=30%  Similarity=0.387  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.|.| .|.+|..++..|++.|++|++++++.
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~   35 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDR   35 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCH
Confidence            5899998 69999999999999999999999863

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.87  E-value=0.017  Score=53.82  Aligned_cols=68  Identities=15%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~Ag  189 (290)
                      +++|+|+| .|-+|..+++.|.++|+.|++++++.    +.+... ....+.++.+|.+++.      +.+.|+||-+..
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~----~~v~~~-~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDP----DHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCH----HHHHHH-HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCH----HHHHHH-HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            45799999 59999999999999999999998753    222222 1235667889998874      346899987653

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=95.85  E-value=0.018  Score=51.05  Aligned_cols=34  Identities=24%  Similarity=0.414  Sum_probs=27.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEE-eC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DN  148 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~-~r  148 (290)
                      .+.+|.|.|++|-+|+.+++.+.+. +.+++++ ++
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~   55 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVR   55 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            3468999999999999999999876 5676665 44

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.84  E-value=0.008  Score=56.88  Aligned_cols=67  Identities=18%  Similarity=0.400  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~  187 (290)
                      .|+|+|.| .|-+|.++++.|.++|++|++++++    ++.+..+....++..+.+|-+++.      ..++|++|-+
T Consensus         3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d----~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKD----GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESC----HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            47899999 6999999999999999999999864    333333322346788999998875      3468998854

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.84  E-value=0.017  Score=50.66  Aligned_cols=70  Identities=19%  Similarity=0.161  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+++|+|.| +|.+|++++..|.+.|++|++++|+.++..    .......+..  .+-..+.+.++|+||++...
T Consensus       127 ~~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~----~l~~~~g~~~--~~~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          127 VKEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAI----KLAQKFPLEV--VNSPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHH----HHTTTSCEEE--CSCGGGTGGGCSEEEECSST
T ss_pred             cCCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHH----HHHHHcCCee--ehhHHhhhcCCCEEEEeCCC
Confidence            4678999999 589999999999999999999887532222    1211112332  22223445679999998864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.83  E-value=0.017  Score=52.21  Aligned_cols=70  Identities=26%  Similarity=0.280  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+.+|+|+|+ |.||...+..+...|++|++++++..+. +.+.+ ++...+  + .|. +....++|++|.++|.
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~-lGa~~v--~-~~~-~~~~~~~D~vid~~g~  244 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALS-MGVKHF--Y-TDP-KQCKEELDFIISTIPT  244 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTH-HHHHH-TTCSEE--E-SSG-GGCCSCEEEEEECCCS
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHh-cCCCee--c-CCH-HHHhcCCCEEEECCCc
Confidence            35789999997 9999999888888999999998764333 23332 222222  1 222 1112279999999884

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.81  E-value=0.011  Score=51.96  Aligned_cols=65  Identities=15%  Similarity=0.284  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      +++|.|.|++|.+|..++..|.+.|++|++++|+...... +.. .+   +..  .| ..+.+.++|+||-+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~-~g---~~~--~~-~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR-LQG-MG---IPL--TD-GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH-HHH-TT---CCC--CC-SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHh-cC---CCc--CC-HHHHhcCCCEEEEcC
Confidence            4699999988999999999999999999999875322211 111 11   111  12 233456799999765

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.77  E-value=0.024  Score=50.14  Aligned_cols=37  Identities=30%  Similarity=0.472  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ...||+++|.|+++-+|+.++..|+.+|++|+++.+.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999999999999999999999999998653

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=95.75  E-value=0.015  Score=53.35  Aligned_cols=93  Identities=18%  Similarity=0.077  Sum_probs=52.3

Q ss_pred             CCEEEEEcCCchHHHHHHHH-HHHCCC---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDR-LIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~-L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      |++|.|.||+|.+|+.+++. |.++++   .++.+.......  .+. .+....+.+...+- ...+.++|+||-|.|. 
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~-~~~g~~i~~~~~~~-~~~~~~~DvVf~a~g~-   75 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAP-SFGGTTGTLQDAFD-LEALKALDIIVTCQGG-   75 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCC-GGGTCCCBCEETTC-HHHHHTCSEEEECSCH-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--Ccc-ccCCCceEEEecCC-hHHhcCCCEEEECCCc-
Confidence            36899999999999999995 444543   455554432111  111 11122333333321 1224689999998862 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS  230 (290)
                                       ..+......+.+.|++.++++-
T Consensus        76 -----------------~~s~~~a~~~~~~G~k~vVID~   97 (367)
T 1t4b_A           76 -----------------DYTNEIYPKLRESGWQGYWIDA   97 (367)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCCEEEEC
T ss_pred             -----------------hhHHHHHHHHHHCCCCEEEEcC
Confidence                             1234455666777864344443

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.74  E-value=0.0057  Score=54.79  Aligned_cols=68  Identities=24%  Similarity=0.286  Sum_probs=44.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc-cc----cccc-ccCCCEEEEccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH-DV----VEPL-LLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~-D~----~~~~-~~~vD~vih~Ag  189 (290)
                      +|+|+||+|.+|...+..+...|++|++++++..+. +.+.+. +...  +++. |.    .... -.++|++|+++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-~~~~~l-Ga~~--v~~~~~~~~~~~~~~~~~~~d~vid~~g  226 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA-DYLKQL-GASE--VISREDVYDGTLKALSKQQWQGAVDPVG  226 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-HHHHHH-TCSE--EEEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc-CCcE--EEECCCchHHHHHHhhcCCccEEEECCc
Confidence            799999999999999988888899999998864332 333322 2111  1221 11    1111 135899999987

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.74  E-value=0.0026  Score=57.59  Aligned_cols=34  Identities=29%  Similarity=0.393  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      .+.+|+|+|+ |.||..++..+...|+ +|++++++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~  201 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS  201 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            6789999999 9999999999888999 99999875

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=95.73  E-value=0.097  Score=49.15  Aligned_cols=42  Identities=24%  Similarity=0.289  Sum_probs=34.6

Q ss_pred             CCCCCCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       105 ~~~~p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++-.|.  ...+.+|.|.| .|++|..++..|++.|++|+++|.+
T Consensus        12 ~~~~p~--~~~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did   53 (444)
T 3vtf_A           12 SGLVPR--GSHMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVN   53 (444)
T ss_dssp             -CCCCT--TCCCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred             CCcCCC--CCCCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECC
Confidence            445553  23577999998 9999999999999999999999875

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.71  E-value=0.026  Score=49.90  Aligned_cols=56  Identities=23%  Similarity=0.314  Sum_probs=44.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ...+++++|.|+++-+|+.++..|+.+|++|+++.+...                    | ..+...+.|+||...|
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~--------------------~-L~~~~~~ADIVI~Avg  213 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT--------------------D-LKSHTTKADILIVAVG  213 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------S-HHHHHTTCSEEEECCC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch--------------------h-HHHhcccCCEEEECCC
Confidence            468999999999999999999999999999998865321                    1 1233456788888776

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=95.70  E-value=0.03  Score=52.80  Aligned_cols=73  Identities=15%  Similarity=0.101  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ...++|+|+|.| .|-+|...++.|++.|++|++++....   +.+.......++.++..+..+..+.++|.||-+-
T Consensus         8 ~~l~~~~vlVvG-gG~va~~k~~~L~~~ga~V~vi~~~~~---~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at   80 (457)
T 1pjq_A            8 CQLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI---PQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT   80 (457)
T ss_dssp             ECCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC---HHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred             EECCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEcCCCC---HHHHHHHhcCCEEEEECCCCccccCCccEEEEcC
Confidence            456789999999 678999999999999999999986422   2333333445688888777777777788877543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.70  E-value=0.021  Score=53.74  Aligned_cols=75  Identities=15%  Similarity=0.026  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccC-CCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE-VDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-vD~vih~Ag~  190 (290)
                      .++|+|.|.|. |..|.++++.|.++|++|++.|+........... +....+.+..+.-.+..+.+ +|.||...|+
T Consensus         7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~-L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi   82 (451)
T 3lk7_A            7 FENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQS-LLEEGIKVVCGSHPLELLDEDFCYMIKNPGI   82 (451)
T ss_dssp             TTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHH-HHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHH-HHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence            56889999996 8899999999999999999999754211111111 12234566655544444455 8999988875

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.65  E-value=0.014  Score=52.59  Aligned_cols=79  Identities=19%  Similarity=0.112  Sum_probs=51.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCC-eEEEE-c--ccccccccCCCEEEEc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIR-H--DVVEPLLLEVDQIYHL  187 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-v~~~~-~--D~~~~~~~~vD~vih~  187 (290)
                      ....+++++|.|++.-+|+.+++.|+..|++|++++|+..+..+.......... ...+. .  +-..+.+.+.|+||..
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsA  252 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG  252 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEEC
Confidence            357899999999888899999999999999999998753222221111111101 11111 1  2234456679999998


Q ss_pred             ccC
Q 022900          188 ACP  190 (290)
Q Consensus       188 Ag~  190 (290)
                      .|.
T Consensus       253 tg~  255 (320)
T 1edz_A          253 VPS  255 (320)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.65  E-value=0.072  Score=47.74  Aligned_cols=71  Identities=13%  Similarity=-0.056  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHH-HHHHHHHCCCeEEEEeCCCCCc-hhhhhcccCCCCeEEEEcccccccc-cCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSH-LVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLL-LEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~-la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~-~~vD~vih~Ag~  190 (290)
                      .+|+|.|.| -|++|.. +++.|.++|++|.+.|+..... .+.+.    ...+.+..+.-.+... .++|.||...|+
T Consensus         3 ~~~~i~~iG-iGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~----~~gi~v~~g~~~~~l~~~~~d~vV~Spgi   76 (326)
T 3eag_A            3 AMKHIHIIG-IGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLE----ALGIDVYEGFDAAQLDEFKADVYVIGNVA   76 (326)
T ss_dssp             CCCEEEEES-CCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHH----HTTCEEEESCCGGGGGSCCCSEEEECTTC
T ss_pred             CCcEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHH----hCCCEEECCCCHHHcCCCCCCEEEECCCc
Confidence            467999999 6788885 9999999999999999854321 11222    1245555543333333 479999998775

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.65  E-value=0.012  Score=53.85  Aligned_cols=71  Identities=13%  Similarity=0.123  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---cccccc----ccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEPL----LLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~~----~~~vD~vih  186 (290)
                      ..+.+|+|+||+|.+|...+..+...|++|+++.+  +.+.+.+.+. +..  .+++.   |+.+..    -.++|++|.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~--~~~~~~~~~l-Ga~--~vi~~~~~~~~~~v~~~t~g~~d~v~d  237 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCS--PHNFDLAKSR-GAE--EVFDYRAPNLAQTIRTYTKNNLRYALD  237 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC--GGGHHHHHHT-TCS--EEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC--HHHHHHHHHc-CCc--EEEECCCchHHHHHHHHccCCccEEEE
Confidence            45789999999999999999888889999998862  2333333322 211  12222   221111    135999999


Q ss_pred             ccc
Q 022900          187 LAC  189 (290)
Q Consensus       187 ~Ag  189 (290)
                      ++|
T Consensus       238 ~~g  240 (371)
T 3gqv_A          238 CIT  240 (371)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            988

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.65  E-value=0.025  Score=49.76  Aligned_cols=36  Identities=19%  Similarity=0.190  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..|++++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            688999999999999999999999999999998753

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.65  E-value=0.019  Score=52.09  Aligned_cols=35  Identities=34%  Similarity=0.472  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      .++++|+|.| .|++|.++++.|+..|. +++++|+.
T Consensus        32 L~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           32 IKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HhCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            5678999999 79999999999999997 68888764

>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*

Probab=95.62  E-value=0.04  Score=53.05  Aligned_cols=104  Identities=11%  Similarity=0.137  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~  170 (290)
                      +...+|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+.++...-+++.+.
T Consensus        30 L~~~~VlvvG-~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~~  108 (531)
T 1tt5_A           30 LESAHVCLIN-ATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE  108 (531)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEeC
Confidence            4457999999 68999999999999997 7888865421100                      0111111223455555


Q ss_pred             ccccc------ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          171 HDVVE------PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       171 ~D~~~------~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      .++.+      +.+.++|+||.+..         +.        ..-..+.++|.+.++.+|..++.+.+|
T Consensus       109 ~~~~~~~~~~~~~~~~~DvVi~~~d---------~~--------~~r~~ln~~c~~~~iplI~~~~~G~~G  162 (531)
T 1tt5_A          109 ESPENLLDNDPSFFCRFTVVVATQL---------PE--------STSLRLADVLWNSQIPLLICRTYGLVG  162 (531)
T ss_dssp             SCHHHHHHSCGGGGGGCSEEEEESC---------CH--------HHHHHHHHHHHHTTCCEEEEEEETTEE
T ss_pred             CCcchhhhhhHHHhcCCCEEEEeCC---------CH--------HHHHHHHHHHHHcCCCEEEEEecCCeE
Confidence            54432      34567999998742         22        223345577888888888888776555

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.61  E-value=0.0086  Score=54.77  Aligned_cols=71  Identities=23%  Similarity=0.240  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc---ccccccccCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH---DVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~---D~~~~~~~~vD~vih~Ag~  190 (290)
                      .+.+|+|+|+ |.+|...+..+...|++|++++++..+. +.+.+. +..  .++..   |..+....++|++|.++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~-~~a~~l-Ga~--~vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKAL-GAD--EVVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH-TCS--EEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc-CCc--EEeccccHHHHHHhhcCCCEEEECCCC
Confidence            5789999997 8899999888888999999998754332 222222 211  12221   2122222579999999884

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.56  E-value=0.023  Score=50.51  Aligned_cols=59  Identities=20%  Similarity=0.253  Sum_probs=46.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccc-ccccccCCCEEEEcccC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-VEPLLLEVDQIYHLACP  190 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~-~~~~~~~vD~vih~Ag~  190 (290)
                      ....|++++|.|+++-+|+.++..|+++|++|+++.+...                    |+ ..+...+.|+||...+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------------~l~l~~~~~~ADIVI~Avg~  220 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------------TEDMIDYLRTADIVIAAMGQ  220 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------------HHHHHHHHHTCSEEEECSCC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------------CchhhhhhccCCEEEECCCC
Confidence            3468999999999999999999999999999999976321                    11 01345678999988774

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.56  E-value=0.031  Score=49.63  Aligned_cols=68  Identities=16%  Similarity=0.152  Sum_probs=44.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+.+|+|+|| |.+|...+..+...|++|++++ + +.+.+.+.+. +   ++.+--| .+..-.++|++|.+.|
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~-~~~~~~~~~l-G---a~~v~~d-~~~v~~g~Dvv~d~~g  208 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-A-SLSQALAAKR-G---VRHLYRE-PSQVTQKYFAIFDAVN  208 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-S-SCCHHHHHHH-T---EEEEESS-GGGCCSCEEEEECC--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-C-hhhHHHHHHc-C---CCEEEcC-HHHhCCCccEEEECCC
Confidence            35789999999 9999998888877899999998 3 3333433332 2   2211124 3333346999999987

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.54  E-value=0.065  Score=52.56  Aligned_cols=104  Identities=17%  Similarity=0.269  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------------------hhhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~v~~~~  170 (290)
                      +.+.+|+|.| .|++|.++++.|+..|. +++++|...-...                      +.+..+...-+++.+.
T Consensus        15 L~~s~VlVVG-aGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVG-AGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            4457999999 69999999999999997 7888876421110                      0111111223466666


Q ss_pred             cccccc-----cccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccc
Q 022900          171 HDVVEP-----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (290)
Q Consensus       171 ~D~~~~-----~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg  235 (290)
                      .++.+.     .+.++|+||.+..                 |+..-..+-+.|.+.++.+|..++.+.+|
T Consensus        94 ~~i~~~~~~~~~~~~~DlVvda~D-----------------n~~aR~~ln~~c~~~~iPlI~~g~~G~~G  146 (640)
T 1y8q_B           94 DSIMNPDYNVEFFRQFILVMNALD-----------------NRAARNHVNRMCLAADVPLIESGTAGYLG  146 (640)
T ss_dssp             SCTTSTTSCHHHHTTCSEEEECCS-----------------CHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred             cccchhhhhHhhhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecccc
Confidence            666432     3467999998743                 22333445667777787787776655433

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.49  E-value=0.034  Score=46.54  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+++|.|.| .|.+|..++..|.+.|++|++++|+.
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            5678999999 89999999999999999999998753

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.44  E-value=0.03  Score=50.72  Aligned_cols=37  Identities=19%  Similarity=0.116  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+.+|+|+||+|.+|...+..+...|++|+++.+..
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            3578999999999999988887777899988887643

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.42  E-value=0.031  Score=48.56  Aligned_cols=69  Identities=17%  Similarity=0.071  Sum_probs=44.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCC---eEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN---FELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      |+|.|.|+ |.+|..++..|.+.|++|++++|+...... +........   ..+. .+. .+.+.++|+||-+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~~~~-~~~-~~~~~~~d~vi~~v~   72 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS-VNLVETDGSIFNESLT-AND-PDFLATSDLLLVTLK   72 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE-EEEECTTSCEEEEEEE-ESC-HHHHHTCSEEEECSC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceee-EEEEcCCCceeeeeee-ecC-ccccCCCCEEEEEec
Confidence            47999995 999999999999999999999986543322 111100111   1111 121 234567999997653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.40  E-value=0.0067  Score=57.08  Aligned_cols=36  Identities=25%  Similarity=0.345  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+||+|.||...+..+...|++|++++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~  262 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSS  262 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC
Confidence            457899999999999999998888899999998863

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.39  E-value=0.088  Score=47.01  Aligned_cols=68  Identities=13%  Similarity=0.102  Sum_probs=45.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-cccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-LLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~vD~vih~A  188 (290)
                      ..++|.|.| .|.+|..+++.|.+.|+  +|++.+|+........ +   ...++-...|. ++ .+.++|+||-+.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~---~G~~~~~~~~~-~~~~~~~aDvVilav  102 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-D---LGIIDEGTTSI-AKVEDFSPDFVMLSS  102 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-H---TTSCSEEESCT-TGGGGGCCSEEEECS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-H---CCCcchhcCCH-HHHhhccCCEEEEeC
Confidence            457999999 89999999999999999  9999987532222111 1   11111112232 33 567899999765

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.32  E-value=0.017  Score=51.45  Aligned_cols=39  Identities=18%  Similarity=0.279  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  152 (290)
                      ..++++|.|.| .|.+|..++..|++.|++|++.+|+...
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            35678999998 8999999999999999999999886433

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.32  E-value=0.0098  Score=53.98  Aligned_cols=36  Identities=19%  Similarity=0.009  Sum_probs=31.0

Q ss_pred             CC-CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          115 KG-LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       115 ~~-k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .+ .+|+|+||+|.+|...+..+...|++|+++++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR  202 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence            46 8999999999999988887777899999987644

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.31  E-value=0.013  Score=51.46  Aligned_cols=36  Identities=22%  Similarity=0.206  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      +.++|.|.| +|.+|..++..|++.|++|++.+++.+
T Consensus         3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~   38 (283)
T 4e12_A            3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTD   38 (283)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            346899998 699999999999999999999988643

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.27  E-value=0.029  Score=49.68  Aligned_cols=35  Identities=29%  Similarity=0.371  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      +++|.|.||.|.+|..++..|.+.|++|++++|+.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            46899999999999999999999999999998754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.27  E-value=0.0046  Score=55.79  Aligned_cols=34  Identities=26%  Similarity=0.416  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      .+.+|+|+|| |.+|..++..+...|+ +|++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~  198 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPN  198 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            5779999999 9999999988888999 89999864

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.24  E-value=0.042  Score=49.49  Aligned_cols=68  Identities=19%  Similarity=0.204  Sum_probs=49.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ....+|+|.|.| .|-||+.+++.|...|.+|++.+|+...... .        ......+-.++.+.+.|+|+.+.-
T Consensus       133 ~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~--------~~~~~~~~l~ell~~aDvV~l~lP  200 (324)
T 3evt_A          133 STLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADH-F--------HETVAFTATADALATANFIVNALP  200 (324)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-C--------SEEEEGGGCHHHHHHCSEEEECCC
T ss_pred             ccccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHh-H--------hhccccCCHHHHHhhCCEEEEcCC
Confidence            457899999999 8999999999999999999999986432211 1        111233444556677899887653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.23  E-value=0.039  Score=48.74  Aligned_cols=64  Identities=19%  Similarity=0.145  Sum_probs=44.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      .++|.|.| .|.+|..++..|++.|++|++.+|+..........     .+.  ..+-.++... +|+||-+.
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~--~~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-----GAT--LADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-----TCE--ECSSHHHHTT-SSEEEECC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-----CCE--EcCCHHHHHh-CCEEEEEC
Confidence            45899998 89999999999999999999999876544432221     121  1222233344 88888765

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.23  E-value=0.037  Score=50.93  Aligned_cols=38  Identities=21%  Similarity=0.245  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  152 (290)
                      ..+++|+|+| .|.+|..+++.+...|++|++++++..+
T Consensus       170 l~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~  207 (384)
T 1l7d_A          170 VPPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAAT  207 (384)
T ss_dssp             ECCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4678999999 5999999999999999999999886543

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.21  E-value=0.089  Score=49.48  Aligned_cols=36  Identities=28%  Similarity=0.347  Sum_probs=32.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  153 (290)
                      -++.|.| .|++|..++..|++.|++|++++++....
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            4789999 89999999999999999999999875443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.16  E-value=0.016  Score=51.66  Aligned_cols=69  Identities=25%  Similarity=0.231  Sum_probs=44.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc-ccc--cc-cccCCCEEEEccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVV--EP-LLLEVDQIYHLAC  189 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~-D~~--~~-~~~~vD~vih~Ag  189 (290)
                      ++ |+|+||+|.+|...+..+...|++|++++++..+ .+.+.+. +. . .+++. |..  .. .-.++|++|.++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~-~~~~~~l-Ga-~-~vi~~~~~~~~~~~~~~~~d~v~d~~g  220 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGREST-HGYLKSL-GA-N-RILSRDEFAESRPLEKQLWAGAIDTVG  220 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG-HHHHHHH-TC-S-EEEEGGGSSCCCSSCCCCEEEEEESSC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHhc-CC-C-EEEecCCHHHHHhhcCCCccEEEECCC
Confidence            35 9999999999999998888899999999875332 2222222 21 1 11221 111  11 1136899999886

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.10  E-value=0.032  Score=51.08  Aligned_cols=36  Identities=31%  Similarity=0.466  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+++|+|.|.| .|-+|..+++.|.+.|++|++.|++
T Consensus       170 ~L~GktV~V~G-~G~VG~~~A~~L~~~GakVvv~D~~  205 (364)
T 1leh_A          170 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN  205 (364)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCcCEEEEEC-chHHHHHHHHHHHHCCCEEEEEcCC
Confidence            37889999999 5999999999999999999988764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.10  E-value=0.02  Score=50.27  Aligned_cols=35  Identities=23%  Similarity=0.328  Sum_probs=31.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  152 (290)
                      |+|.|.| .|.+|..++..|++.|++|++.+|+...
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEK   36 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            5899998 7999999999999999999999886433

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.06  E-value=0.039  Score=49.76  Aligned_cols=35  Identities=26%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|+|+ |.+|...+..+...|++|++++++
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~  201 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARS  201 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCC
Confidence            35789999996 999999988888899999998864

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.05  E-value=0.016  Score=48.93  Aligned_cols=37  Identities=24%  Similarity=0.277  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEE-EeCCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFT  151 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~  151 (290)
                      +++++|.|.| +|.+|..++..|.+.|++|++ .+|+.+
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~   58 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPA   58 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence            3467899999 899999999999999999998 676543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	290
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-53
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-34
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-31
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-30
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-30
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	6e-29
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-27
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-27
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-26
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	5e-26
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-23
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-20
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-18
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	6e-17
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-16
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	6e-15
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-14
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	5e-14
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	2e-13
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-12
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-11
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-11
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-10
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-09
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-09
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	9e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	9e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	5e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	6e-06
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	3e-04
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	0.004
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 2e-53
 Identities = 102/141 (72%), Positives = 114/141 (80%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 63  YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 122

Query: 238 LQHPQKETYWGNVNPIGTYFF 258
             HPQ E YWG+VNPIG    
Sbjct: 123 EVHPQSEDYWGHVNPIGPRAC 143

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  125 bits (315), Expect = 2e-34
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 19/156 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMH--HFGNPNFELIRH 171
             ++TG  G  GS+L + L+ +G  V  +      F T R +++    H  NP F L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 172 DVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-- 222
           D+ +   L         D++Y+L   +       +P  T   + +GTL +L   + +G  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 223 --ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
              RF   STSE+YG   + PQKET      P   Y
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETT--PFYPRSPY 156

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  117 bits (295), Expect = 2e-31
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
           +I++TGGAGF+GS +V  +I    D+V+ +D   + G  E++     +  +     D+ +
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----- 223
              +         D + HLA  +        P   I+TN+VGT  +L +A++  +     
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 224 -----RFLLTSTSEVYGDPLQHPQKETYW 247
                RF   ST EVYGD     + E   
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSV 150

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  114 bits (286), Expect = 2e-30
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 12/180 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
           R++VTGG+G++GSH   +L+  G  VI++DN    ++  +  +   G  +   +  D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 227
             L+        +D + H A   +       P++    NV GTL ++   +      F+ 
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121

Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN 287
           +S++ VYGD  + P  E++     P   Y     L+    ++  + ++      +L Y N
Sbjct: 122 SSSATVYGDQPKIPYVESFPTG-TPQSPYGK-SKLMVEQILTDLQKAQPDWSIALLRYFN 179

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  114 bits (284), Expect = 4e-30
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEP 176
           ++++TGG GF+GS+L    +++G  +IV DN    G  +N+       NFE +  D+   
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA--KRVGARFLL 227
             +         D  +HLA   +      NP    + NV GTLN+L            + 
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGTYFF 258
           +ST++VYGD  Q+   ET            +
Sbjct: 122 SSTNKVYGDLEQYKYNETETRYTCVDKPNGY 152

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  110 bits (276), Expect = 6e-29
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 13/183 (7%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV------MHHFGNPN 165
           L  +    ++TG AGF+GS+L++ L+     V+ +DNF TG + N+      +      N
Sbjct: 12  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71

Query: 166 FELIRHDVVEPLLL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR 220
           F+ I+ D+            VD + H A   S      +P+ +  TN+ G LNML  A+ 
Sbjct: 72  FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131

Query: 221 VG-ARFLLTSTSEVYGDPLQHPQKETYWGN-VNPIGTYFFSFSLIFLVFISQFRPSRKAC 278
                F   ++S  YGD    P+ E   G  ++P     +   L   VF   +  S    
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGL 191

Query: 279 RFF 281
           R+F
Sbjct: 192 RYF 194

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  106 bits (266), Expect = 1e-27
 Identities = 29/142 (20%), Positives = 48/142 (33%), Gaps = 18/142 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           R+ + G  G VGS +  +L  RGD  +V+                     L+    V   
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR--------------DELNLLDSRAVHDF 49

Query: 178 LLE--VDQIYHLACPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEV 233
                +DQ+Y  A      V     P   I  N++   N++  A +    + L   +S +
Sbjct: 50  FASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI 109

Query: 234 YGDPLQHPQKETYWGNVNPIGT 255
           Y    + P  E+         T
Sbjct: 110 YPKLAKQPMAESELLQGTLEPT 131

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  106 bits (264), Expect = 3e-27
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG------DSVIVVDNF-FTGRKENVMHHFGNPNFELIR 170
           R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    + 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 171 HDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-AR 224
            D+ +  LL      VD I H A  +             +TNV GT  +L  A   G  R
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFS 259
            +  ST++VYG        E+    + P   Y  S
Sbjct: 122 VVHVSTNQVYGSIDSGSWTESSP--LEPNSPYAAS 154

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (260), Expect = 1e-26
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 12/181 (6%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEP 176
           ++VTGGAG++GSH V  LI  G   +V DN      ++V         +      D+ + 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLT 228
             LE       +D + H A   +       P++    N++GT+ +L L ++     F+ +
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 229 STSEVYGDPLQHPQKETYWGN--VNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYR 286
           S++ VYGD  + P          + P   Y  +   I  +    +   +K+ +F IL Y 
Sbjct: 124 SSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYF 183

Query: 287 N 287
           N
Sbjct: 184 N 184

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (256), Expect = 5e-26
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 20/154 (12%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHH---FGNPNFELIRHDV 173
           +TG  G  GS+L + L+ +G  V  +      F TGR E++  +       N +L   D+
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 174 VEPLL-------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---- 222
            +          ++  +IY+L   +           T   + VGTL +L   K  G    
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTY 256
            +F   STSE+YG   + PQKET      P   Y
Sbjct: 126 VKFYQASTSELYGKVQEIPQKETTP--FYPRSPY 157

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 95.1 bits (235), Expect = 3e-23
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 10/147 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
            I+VTGGAGF+GS+ V  +        V V+D       +  +        EL+  D+ +
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 176 PLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
             L++      D I H A  +   +   +P   I TN +GT  +L  A++   RF   ST
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 231 SEVYGDPLQHPQKETYWGNVNPIGTYF 257
            EVYGD    P +E   G+    G  F
Sbjct: 124 DEVYGD---LPLREDLPGHGEGPGEKF 147

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 86.2 bits (212), Expect = 4e-20
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 11/175 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEP 176
             +VTG  G  G++L   L+ +G  V  +     +  +  +       + +    D+ + 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 177 LLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLL 227
             +       +  ++Y+LA  +        PV T   + +G  ++L   ++     RF  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 228 TSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFF 281
            STSE++G      Q E       +P G        I + +   F     +   F
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (200), Expect = 2e-18
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 16/185 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--------MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +           +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 170 RHDVVEPLLLEVDQ-------IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123

Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFI 282
            + L+ S+S       Q+   +           Y  S        I     + K     +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS-KFFIEEMIRDLCQADKTWNAVL 182

Query: 283 LLYRN 287
           L Y N
Sbjct: 183 LRYFN 187

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 77.7 bits (190), Expect = 6e-17
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 14  ENLKISITGAGGFIASHIARRLKHEGHYVIASDWK---KNEHMTEDMFCDEFHLVDLRVM 70

Query: 175 EPLLLEVDQIYHLACPASP----VHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L   + + H+   A+        + N    +  N + + NM+  A+  G  RF   S
Sbjct: 71  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 130

Query: 230 TSEVYG--DPLQHPQKETYWGNVNPIG 254
           ++ +Y     L+         +  P  
Sbjct: 131 SACIYPEFKQLETTNVSLKESDAWPAE 157

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 76.3 bits (186), Expect = 2e-16
 Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 20/184 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVM---HHFGNPNFELIR 170
             ++TG  G  GS+L + L+ +G  V  +      F T R  ++    H+      +L  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 171 HDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
            D+ +   L         D++Y+LA  +        P  T      G L +L   +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 224 RF-----LLTSTSEVYGDPLQHPQKETYWGN-VNPIGTYFFSFSLIFLVFISQFRPSRKA 277
                     + S         PQ ET   +  +P      +     + +   +      
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACN 182

Query: 278 CRFF 281
              F
Sbjct: 183 GILF 186

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 71.9 bits (174), Expect = 6e-15
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
           R+++ G  GF+G+HL +RL+      V  +D               +P+F  +  D+   
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIH 57

Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNP 200
              +E  + + D +  L   A+P+ Y  NP
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNP 87

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 69.5 bits (168), Expect = 4e-14
 Identities = 14/82 (17%), Positives = 21/82 (25%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           +G R+ VTG  GF G  L   L   G +V                       +    D+ 
Sbjct: 7   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 66

Query: 175 EPLLLEVDQIYHLACPASPVHY 196
           +   L              +  
Sbjct: 67  DQNKLLESIREFQPEIVFHMAA 88

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 69.2 bits (167), Expect = 5e-14
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 18/83 (21%)

Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM----------------- 158
           G R++V GG G+ G      L  +   V +VDN      ++ +                 
Sbjct: 1   GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 159 -HHFGNPNFELIRHDVVEPLLLE 180
                  + EL   D+ +   L 
Sbjct: 61  WKALTGKSIELYVGDICDFEFLA 83

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 67.0 bits (161), Expect = 2e-13
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTGGAGF+GS++V  L  +G + ++VVDN   G K   +    N    + + D +  +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 178 LLEVDQIYHLACP 190
           +   +     A  
Sbjct: 61  MAGEEFGDVEAIF 73

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 66.8 bits (161), Expect = 3e-13
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 7/150 (4%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           +G  ++VTG  GFV SH+V++L+  G  V         +  N+   +           VV
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVV 68

Query: 175 EPLL------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           E +L        +     +A  AS V +     + +   + GTLN L  A    +     
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGTYFF 258
            TS      +  P  E  + +         
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESI 158

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 2e-12
 Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I + G  G  G   + + +  G  V V+    +               ++++   V+  
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGD 236
           +   D +  L    + +               G  N++   K  G    +  +++ +  D
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTV-------MSEGARNIVAAMKAHGVDKVVACTSAFLLWD 117

Query: 237 PLQHPQKETYW 247
           P + P +    
Sbjct: 118 PTKVPPRLQAV 128

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 60.9 bits (146), Expect = 2e-11
 Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---RKENVMHHFGNPNFELIRHDVV 174
           R+++ GG G++G  +V+  I+ G    V+          K  ++ +F     +LI   + 
Sbjct: 5   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 64

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           +   L           ++      +     +  +     +  + +    +  L S   + 
Sbjct: 65  DHQRLVDALKQVDVVISALAGGVLSHHILEQLKL-----VEAIKEAGNIKRFLPSEFGMD 119

Query: 235 GDPLQHPQKETYW 247
            D ++H  +    
Sbjct: 120 PDIMEHALQPGSI 132

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 61.0 bits (146), Expect = 2e-11
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG----RKENVMHHFGNPNFELIRHDV 173
           RI++ G  G++G H+    +  G    ++    T      K  ++  F      ++   +
Sbjct: 5   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 57.9 bits (138), Expect = 3e-10
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 19/91 (20%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKEN------------------VM 158
           R++V GGAG++GSH V  L+     SV++VD+      ++                    
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 159 HHFGNPNFELIRHDVVEPLLLEVDQIYHLAC 189
             + +    L   DV     L      H   
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPI 94

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.8 bits (135), Expect = 4e-10
 Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP 176
            ++VTG +G  G  +  +L    D  +      + + +  +    +    ++   D + P
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 64

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTI 204
               +D +  L      +   F+P K  
Sbjct: 65  AFQGIDALVILTSAVPKMKPGFDPTKGG 92

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 55.6 bits (132), Expect = 1e-09
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 17/132 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I++TG  G +G  +  +L  +   VI  D                 + ++     V   
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKF 47

Query: 178 LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
             E   + + + A   +    +       K N +G  N+   A  VGA  +  ST  V+ 
Sbjct: 48  FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFD 107

Query: 236 DPLQHPQKETYW 247
              + P  E   
Sbjct: 108 GEAKEPITEFDE 119

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 54.9 bits (130), Expect = 2e-09
 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 10/130 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            I++ G  G VG  L   L   G+ +I +D        +        N + +   V +  
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKEFCGDFS------NPKGVAETVRK-- 52

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            L  D I + A   +    +  P      N      +   A   GA  +  ST  V+   
Sbjct: 53  -LRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGT 111

Query: 238 LQHPQKETYW 247
              P +ET  
Sbjct: 112 GDIPWQETDA 121

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 50.4 bits (119), Expect = 9e-08
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
            I V G  G  G+ L+    A G  V    +  + +          PN  L +  ++  
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVH--SLKGLIAEELQAIPNVTLFQGPLLNN 61

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.3 bits (108), Expect = 9e-07
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF 161
           R+++ G  G  G HL+DR+++      V+      RK    H  
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIA---PARKALAEHPR 44

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (103), Expect = 5e-06
 Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 3/60 (5%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH 171
            + +   + + G +G  G  L+  ++ +G    V      GR++         N      
Sbjct: 10  FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVT---LIGRRKLTFDEEAYKNVNQEVV 66

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 17/133 (12%), Positives = 29/133 (21%), Gaps = 6/133 (4%)

Query: 97  VGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN 156
                V    K   G   KG + VV  G G VG      L   G  V++        +  
Sbjct: 5   TAAAGVALVVKA-AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAA 63

Query: 157 VMHHFGNPNFELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGT 211
                      +   +          +     ++        +  +          +V  
Sbjct: 64  ADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVAD 123

Query: 212 LNMLGLAKRVGAR 224
            N        G  
Sbjct: 124 YNAQPPLGIGGID 136

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 1/91 (1%)

Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           V+  G+GFV    +D L   G  V V      + +K +       P    +  D      
Sbjct: 5   VLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE 64

Query: 179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVV 209
           +    +     P +            K +VV
Sbjct: 65  VAKHDLVISLIPYTFHATVIKSAIRQKKHVV 95

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD 147
           +  R++V GG G +GS  V    AR   V  +D
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASID 33

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 9/30 (30%), Positives = 19/30 (63%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVD 147
           +++V GG G +GS +++     G +V+ +D
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNID 33

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD 147
           KGL  V+TGGA  +G    +RL+ +G S +++D
Sbjct: 4   KGLVAVITGGASGLGLATAERLVGQGASAVLLD 36

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD 147
           G++ K   ++V   +  +G  + D L   G  V +  
Sbjct: 1   GIRDK--GVLVLAASRGIGRAVADVLSQEGAEVTICA 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	290
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.95
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.93
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.93
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.93
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.93
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.93
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.92
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.92
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.91
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.9
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.9
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.9
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.89
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.87
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.86
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.84
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.81
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.79
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.79
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.79
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.79
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.79
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.79
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.78
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.78
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.78
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.78
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.78
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.78
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.78
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.78
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.78
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.78
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.78
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.78
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.77
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.77
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.77
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.77
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.77
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.77
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.77
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.76
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.76
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.76
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.75
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.75
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.75
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.74
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.74
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.74
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.74
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.74
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.73
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.73
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.73
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.73
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.72
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.72
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.72
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.72
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.72
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.72
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.71
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.7
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.7
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.7
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.69
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.69
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.69
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.67
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.67
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.66
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.65
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.63
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.63
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.63
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.62
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.62
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.61
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.59
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.53
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.5
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.46
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.45
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.45
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.4
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.38
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.37
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.37
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.35
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.28
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.19
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.14
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.12
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.1
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.1
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.1
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.96
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.96
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.9
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.89
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.86
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.82
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.8
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.79
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.75
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.72
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.7
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.68
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.64
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.59
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.58
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.56
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.51
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.47
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.44
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.43
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.35
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.34
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.3
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.27
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.24
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.18
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.1
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.08
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.08
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.06
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.94
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.93
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.88
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.73
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.69
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.67
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.66
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.63
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.54
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.52
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.51
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.5
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.38
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.38
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.34
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.11
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.11
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.05
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.04
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.95
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.8
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.75
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.7
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.69
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.63
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.62
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.54
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.51
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.47
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.37
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.35
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.32
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.3
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.29
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.29
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.26
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.26
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.23
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.14
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.13
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.12
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.1
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.09
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.07
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	95.02
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.99
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.97
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.95
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.89
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.86
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	94.86
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.81
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.79
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.7
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.57
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.5
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.42
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.36
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.31
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.28
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.21
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.2
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.17
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.11
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.03
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.02
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.01
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.99
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.98
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.89
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.87
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.86
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.85
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.76
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.73
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	93.73
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.69
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.69
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.68
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.61
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.51
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.43
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.43
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.4
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.3
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.1
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.99
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.96
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	92.95
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.95
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.84
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.76
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	92.75
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.55
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.3
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	92.27
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.24
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.13
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.05
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	91.94
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.88
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.87
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.64
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.58
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.11
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.86
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	90.59
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.51
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.5
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	90.37
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.17
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.14
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	89.64
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.3
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.18
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.16
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.12
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.94
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.85
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	88.44
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.35
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	88.35
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.24
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	88.11
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.06
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.03
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.99
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	87.96
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	87.95
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	87.84
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.75
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	87.61
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	87.3
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	87.22
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.87
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.52
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	86.36
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.07
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	85.66
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	85.25
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	84.85
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.71
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.63
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	84.35
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	84.16
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	83.88
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	83.77
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	83.67
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.32
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.07
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.06
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	82.92
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	82.68
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	82.37
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.14
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	81.74
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	81.56
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.45
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	80.62
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	80.5
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	80.39

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-29  Score=227.20  Aligned_cols=172  Identities=58%  Similarity=0.902  Sum_probs=153.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~  195 (290)
                      .|+|+||||+||||++|+++|+++|++|++++|......+.+.......++++.+.|+.+..+.++|+|||+|+......
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~~   80 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPN   80 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCchh
Confidence            37899999999999999999999999999999877666666666666778999999999999999999999999876666


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC------CCCChhhhhHHHHHHHHHHHHH
Q 022900          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW------GNVNPIGTYFFSFSLIFLVFIS  269 (290)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~------~~~~py~~~k~~~e~~~~~~~~  269 (290)
                      +..++.+.+++|+.|+.+++++|++.++++||+||++|||.....+.+|+.+      .|.++|+.+|...|.++..+.+
T Consensus        81 ~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~  160 (312)
T d2b69a1          81 YMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK  160 (312)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            7788999999999999999999999989999999999999888878777654      4556799999999999999999


Q ss_pred             HhCCCeeEEEeeeeeccc
Q 022900          270 QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       270 ~~gl~~~ilR~~~lr~~~  287 (290)
                      ++|++++++|++++.+.+
T Consensus       161 ~~~~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         161 QEGVEVRVARIFNTFGPR  178 (312)
T ss_dssp             HHCCCEEEEEECCEECTT
T ss_pred             HhCCcEEEEEeeeEECCC
Confidence            999999999999998754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=9.6e-28  Score=219.67  Aligned_cols=171  Identities=26%  Similarity=0.272  Sum_probs=141.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhc-----ccCCCCeEEEEcccccccc-----c--CCCE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMH-----HFGNPNFELIRHDVVEPLL-----L--EVDQ  183 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~-----~~~~~~v~~~~~D~~~~~~-----~--~vD~  183 (290)
                      |+|||||||||||++|+++|+++|++|++++|..... .+.+..     .....+++++.+|+++...     .  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999853221 111111     1234689999999987643     2  5799


Q ss_pred             EEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHH
Q 022900          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFF  258 (290)
Q Consensus       184 vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~----riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~  258 (290)
                      |||+||.........++..++++|+.||.|++++|++.+.    +||++||.+|||.+...+++|+. ..|.+||+.+|.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            9999998777777889999999999999999999998652    79999999999998888998887 467889999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      ..|.+++.|.++++++++++|++++.+.+
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHESPR  190 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccccCCC
Confidence            99999999999999999999999988753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=6.4e-26  Score=205.57  Aligned_cols=172  Identities=24%  Similarity=0.403  Sum_probs=141.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhc--ccCCCCeEEEEcccccccc-----c--CCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPLL-----L--EVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~v~~~~~D~~~~~~-----~--~vD~vih~  187 (290)
                      |+|+||||+||||++|++.|+++|++|++++|...........  .....+++++.+|+++...     .  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            5799999999999999999999999999999865554433222  2245689999999988742     2  69999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC--CCCCChhhhhHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY--WGNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~--~~~~~py~~~k~~~e~~~  264 (290)
                      ||.........++..++++|+.||.+++++|++.++ ++|++||.++|+.....+..|..  ..+..+|+.+|...|.++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            997665556678899999999999999999999985 99999999999877666555543  356789999999999988


Q ss_pred             HHHHHH-hCCCeeEEEeeeeecccC
Q 022900          265 LVFISQ-FRPSRKACRFFILLYRNG  288 (290)
Q Consensus       265 ~~~~~~-~gl~~~ilR~~~lr~~~~  288 (290)
                      ..+..+ .+++++++|++++.+.+.
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCT
T ss_pred             HHHHhhccCCeEEEEeeccEEeccC
Confidence            866655 589999999999987653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=7.8e-26  Score=204.92  Aligned_cols=173  Identities=28%  Similarity=0.357  Sum_probs=147.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc------cCCCCeEEEEccccccc-----ccCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH------FGNPNFELIRHDVVEPL-----LLEVD  182 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~v~~~~~D~~~~~-----~~~vD  182 (290)
                      .+.|+|||||||||||++|+++|.++|++|++++|........+...      ....+++++.+|..+..     ....+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            45689999999999999999999999999999998665544333221      12357899999998764     35689


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHH
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSF  260 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~  260 (290)
                      .++|+++......+..++...+++|+.|+.+++++|.+.+. +||++||.++||.....+.+|+.+ .|.++|+.+|...
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence            99999997666667788899999999999999999999996 999999999999988888888774 6778999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeecc
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYR  286 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~  286 (290)
                      |.+++.+.++++++++++|++++.+.
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~~v~G~  199 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYFNVFGR  199 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECT
T ss_pred             HHHHHHHHHHhCCCeEEEEeceeecc
Confidence            99999999999999999999988754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-25  Score=203.49  Aligned_cols=171  Identities=24%  Similarity=0.233  Sum_probs=140.1

Q ss_pred             CEE-EEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhccc------CCCCeEEEEcccccccc-------cCC
Q 022900          117 LRI-VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF------GNPNFELIRHDVVEPLL-------LEV  181 (290)
Q Consensus       117 k~V-lVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~------~~~~v~~~~~D~~~~~~-------~~v  181 (290)
                      |+| |||||+||||++|+++|+++|++|++++|..... ...+....      ...+++++.+|+++...       .++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            456 9999999999999999999999999999964321 11222111      23468999999987642       358


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEcCCccccCCCCCCCCCCCC-CCCChhhhh
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTY  256 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~----riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~  256 (290)
                      ++++|+|+.........++..++++|+.||.+++++|++.+.    +||++||.+|||.+...+++|+.+ .|.+||+.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            899999997655555677788899999999999999998763    799999999999888888888774 677899999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          257 FFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       257 k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      |..+|++++.+.++++++.+++|++++.+.+
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPR  191 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCC
Confidence            9999999999999999999999999987753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.93  E-value=1.6e-25  Score=201.49  Aligned_cols=172  Identities=27%  Similarity=0.345  Sum_probs=144.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCe------EEEEeCCC-CCchhhhhcccCCCCeEEEEccccccc-----ccCCCEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDS------VIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQI  184 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~------V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~v  184 (290)
                      |+|+||||+||||++|++.|+++|++      |+.+++.. ......+.......+++++.+|..+..     ...+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            58999999999999999999999984      55566543 233333444445678999999997764     3569999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHH
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSL  262 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~  262 (290)
                      +|+|+.........++...+++|+.|+.+++++|.+.+. +||++||+++||.....+++|+. ..|.++|+.+|...|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            999997666666678888999999999999999999885 99999999999998888888877 4677899999999999


Q ss_pred             HHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          263 IFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       263 ~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      +++.+.++++++++++|++++.+.+.
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vyGp~~  186 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNYGPYQ  186 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred             HHHHHHHHhCCCEEEEEeeeEECcCC
Confidence            99999999999999999999987553

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.93  E-value=1.8e-25  Score=204.95  Aligned_cols=172  Identities=24%  Similarity=0.339  Sum_probs=139.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCe-EEEEeCCC-CCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~  187 (290)
                      |+|+||||+||||++|+++|+++|++ |+++++.. ....+.+.......+++++.+|+++...       .++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999997 45566543 3334445555566789999999988742       258999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC----------CeEEEEcCCccccCCCCCCCC----------CC-C
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG----------ARFLLTSTSEVYGDPLQHPQK----------ET-Y  246 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~----------~riV~vSS~~vyg~~~~~~~~----------E~-~  246 (290)
                      ||......+..++..++++|+.|+.+++++|++.+          ++||++||.++||.....+..          |. .
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            99877666777889999999999999999997643          389999999999976543322          22 2


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      ..|.++|+.+|...|.++..+.++++++++++|++++.+..+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~  202 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCC
Confidence            356678999999999999999999999999999999987654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=2.7e-25  Score=201.91  Aligned_cols=170  Identities=25%  Similarity=0.392  Sum_probs=139.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh--cccCCCCeEEEEcccccccc-------cCCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--HHFGNPNFELIRHDVVEPLL-------LEVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~  187 (290)
                      |.||||||+||||++|+++|+++|++|+++++......+...  ......+++++.+|+.+...       .++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            579999999999999999999999999999986554433322  22235678999999987642       269999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCC----CCCCCCC-CCCCChhhhhHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ----HPQKETY-WGNVNPIGTYFFSFS  261 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~----~~~~E~~-~~~~~py~~~k~~~e  261 (290)
                      ||...+.....++..++.+|+.|+.+++++|++.+. +||++||.+|||....    .+..|+. ..|.++|+.+|...|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            998766666778888999999999999999999885 9999999999996543    4455554 367789999999999


Q ss_pred             HHHHHHHHH--hCCCeeEEEeeeeecc
Q 022900          262 LIFLVFISQ--FRPSRKACRFFILLYR  286 (290)
Q Consensus       262 ~~~~~~~~~--~gl~~~ilR~~~lr~~  286 (290)
                      .+++.+.+.  ++++++++|++++.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEee
Confidence            999998764  5889999999998864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.3e-24  Score=194.55  Aligned_cols=171  Identities=19%  Similarity=0.144  Sum_probs=144.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~A  188 (290)
                      |+||||||+||||++|++.|+++|++|++++|..... .+.+......++++++.+|+.+...       ...++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            6899999999999999999999999999999875433 2334444345679999999988642       2478999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~  265 (290)
                      +.........++..++++|+.|+.+++++|++.+.  +|++.||..+||.....+.+|+. ..+.++|+.+|...|.++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            87666666778899999999999999999999883  79999999999988888887765 4678999999999999999


Q ss_pred             HHHHHhCCCeeEEEeeeeeccc
Q 022900          266 VFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       266 ~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+.++++++.+++|++++.+..
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPL  182 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHhhcCCcEEEEEEecccCCC
Confidence            9999999999999999987654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.92  E-value=2e-24  Score=196.02  Aligned_cols=173  Identities=24%  Similarity=0.306  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeE--EEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V--~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      +||+|||||||||||++|+++|+++|+.|  +++++................+++++.+|+.+..     +.++|.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            47899999999999999999999999864  5555433222222222234578999999998764     4578999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCC------------CCCCCCC-CCCCCChhh
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPL------------QHPQKET-YWGNVNPIG  254 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~------------~~~~~E~-~~~~~~py~  254 (290)
                      |+.........++.+.+++|+.|+.+++++|...+.++|++||+++||...            .....|. ...|.++|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            998766666678889999999999999999999999999999999998421            1122332 235678899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+|...|.+++.+.+.++++++++|++++.+..
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPY  193 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTT
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCC
Confidence            999999999999999999999999999998754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=4.2e-24  Score=194.88  Aligned_cols=170  Identities=21%  Similarity=0.234  Sum_probs=137.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~A  188 (290)
                      .++|+|+||||+||||++|+++|+++|++|+++++........   .  .....+..+|+.+.     .+.++|.|||+|
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---D--MFCDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---G--GTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh---h--cccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            3678899999999999999999999999999998754322111   1  13445666777654     346799999999


Q ss_pred             cCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC--------CCCCChhhhhHH
Q 022900          189 CPASPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY--------WGNVNPIGTYFF  258 (290)
Q Consensus       189 g~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~--------~~~~~py~~~k~  258 (290)
                      +...... ...++...+.+|+.|+.+++++|++.++ +||++||..+||.....+..|..        ..|.++|+.+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            8654433 2567788999999999999999999996 99999999999976665544432        256789999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          259 SFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       259 ~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      .+|.+++.+.+++|++++++|++++.+.++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~  197 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFG  197 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCC
Confidence            999999999999999999999999998765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.7e-23  Score=189.11  Aligned_cols=167  Identities=20%  Similarity=0.286  Sum_probs=138.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~vD~vih~Ag  189 (290)
                      |+||||||+||||++|+++|+++|+ +|+++++....    ........+++++.+|+++.      ...++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~----~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA----ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG----GGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc----hhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            5799999999999999999999995 89999875332    22233457899999999764      2346999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC--------CCCChhhhhHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW--------GNVNPIGTYFFSFS  261 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~--------~~~~py~~~k~~~e  261 (290)
                      .........++...+++|+.|+.+++++|.+.+.+++++||..+||........|...        .|..+|+.+|...|
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E  156 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchh
Confidence            8776666778888999999999999999999999999999999999776665544332        23356999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          262 LIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       262 ~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .++..+.++++++++++|+..+-+..
T Consensus       157 ~~~~~~~~~~~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         157 RVIWAYGEKEGLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSS
T ss_pred             hhhhhhhcccCceeEEeecccccccc
Confidence            99999999999999999999988753

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.3e-23  Score=187.62  Aligned_cols=154  Identities=18%  Similarity=0.225  Sum_probs=124.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----c--ccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----L--LLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~--~~~vD~vih~A  188 (290)
                      .|+|+||||+||||++|+++|+++|+.|+++++...                   .|+.+.     .  ..++|.|+|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------LNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------ccccCHHHHHHHHhhcCCCEEEEcc
Confidence            468999999999999999999999999988764321                   123222     1  23589999999


Q ss_pred             cCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCC------CChhhhhHHHH
Q 022900          189 CPASPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN------VNPIGTYFFSF  260 (290)
Q Consensus       189 g~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~------~~py~~~k~~~  260 (290)
                      +...... ...++.+.+++|+.||.+++++|.+.+. +|||+||.+|||.....+++|+....      .++|+.+|...
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            8643222 3345677889999999999999999996 89999999999988887887765321      23699999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          261 SLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       261 e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      |.+++.|.+++|++++++|++++.+..+
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence            9999999999999999999999987644

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=3.8e-23  Score=186.05  Aligned_cols=171  Identities=18%  Similarity=0.186  Sum_probs=135.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC-chhhhhcc------cCCCCeEEEEcccccccc-------cCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVMHH------FGNPNFELIRHDVVEPLL-------LEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~------~~~~~v~~~~~D~~~~~~-------~~v  181 (290)
                      .|++||||||||||++|++.|+++|++|++++|.... ..+.+..+      .....+.++.+|+.+...       .++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            3789999999999999999999999999999986421 11111111      134568899999987632       368


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC------CeEEEEcCCccccCCCCCCCCCCC-CCCCChhh
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG------ARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIG  254 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~------~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~  254 (290)
                      |+|||+|+........+++...+++|+.|+.+++++++...      .++++.||..+|+... .+++|+. +.|.++|+
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~  159 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYA  159 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhh
Confidence            99999999866655667889999999999999999986532      3678888888887554 4456655 57788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          255 TYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+|...|.++..+.++++++++++|++++.+..
T Consensus       160 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         160 ASKCAAHWYTVNYREAYGLFACNGILFNHESPR  192 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEEccccCCC
Confidence            999999999999999999999999999998764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.1e-23  Score=187.83  Aligned_cols=172  Identities=24%  Similarity=0.373  Sum_probs=138.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc------hhhhh--cccCCCCeEEEEcccccccc-------cCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR------KENVM--HHFGNPNFELIRHDVVEPLL-------LEV  181 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~--~~~~~~~v~~~~~D~~~~~~-------~~v  181 (290)
                      |+|+||||+||||++|+++|+++|++|++++|.....      .+...  ......++.++.+|+++...       ..+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            6899999999999999999999999999998642211      11111  11245789999999987642       247


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCC--CCCCChhhhhHH
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY--WGNVNPIGTYFF  258 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~--~~~~~py~~~k~  258 (290)
                      |+++|+||.........++.+++++|+.|+.+++++|++.++ +|+++||+.+||........+..  ..+.+||+..|.
T Consensus        83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~  162 (346)
T d1ek6a_          83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKF  162 (346)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHH
T ss_pred             ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHH
Confidence            899999998766666778899999999999999999999995 99999999999876554433332  356789999999


Q ss_pred             HHHHHHHHHHHH-hCCCeeEEEeeeeecccC
Q 022900          259 SFSLIFLVFISQ-FRPSRKACRFFILLYRNG  288 (290)
Q Consensus       259 ~~e~~~~~~~~~-~gl~~~ilR~~~lr~~~~  288 (290)
                      ..|..+..+.+. .+.+.+++|++++.+.++
T Consensus       163 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~  193 (346)
T d1ek6a_         163 FIEEMIRDLCQADKTWNAVLLRYFNPTGAHA  193 (346)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHHhccCCceEEEeecceeccCC
Confidence            999988887765 599999999999987653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=6.1e-23  Score=189.13  Aligned_cols=171  Identities=21%  Similarity=0.197  Sum_probs=131.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc----------------hhhhh--cccCCCCeEEEEccccccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR----------------KENVM--HHFGNPNFELIRHDVVEPL  177 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~--~~~~~~~v~~~~~D~~~~~  177 (290)
                      ||+|+|||||||||++|+++|+++|++|+++|+...+.                .+.+.  ......+++++.+|+++..
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            68999999999999999999999999999998432111                11111  1113467999999998764


Q ss_pred             c-----c--CCCEEEEcccCCCCCCCCCC---hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCCCCCC
Q 022900          178 L-----L--EVDQIYHLACPASPVHYKFN---PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 ~-----~--~vD~vih~Ag~~~~~~~~~~---~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~~~E~  245 (290)
                      .     .  ++|+|||+||.........+   +..++++|+.||.+++++|++.+.  ++++.||..+|+.... +..|.
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~  159 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEG  159 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSS
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccc
Confidence            3     2  57999999997655544444   446789999999999999998773  6888888888875432 22221


Q ss_pred             ---------------CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          246 ---------------YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       246 ---------------~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                                     ...|.++|+.+|...|.++..+.++++++++++|++++.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK  216 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCC
Confidence                           235667899999999999999999999999999999998865

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.89  E-value=2.5e-22  Score=184.48  Aligned_cols=173  Identities=23%  Similarity=0.341  Sum_probs=137.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeCCCCCc--------hhhhhc----------ccCCCCeEEEEcccccc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGR--------KENVMH----------HFGNPNFELIRHDVVEP  176 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~--------~~~~~~----------~~~~~~v~~~~~D~~~~  176 (290)
                      .|+|+||||+||||++|+++|++ .|++|+++|+.....        .+....          ...+..+.++.+|+++.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999986 699999998632111        111111          01235688999999886


Q ss_pred             cc--------cCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCC-------
Q 022900          177 LL--------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH-------  240 (290)
Q Consensus       177 ~~--------~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~-------  240 (290)
                      ..        .++|+|||+|+.........++...+++|+.++.++++++++.+. +++++||.++|+.....       
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            32        468999999998766666677888999999999999999999985 89999999998754432       


Q ss_pred             CCCCC-CCCCCChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          241 PQKET-YWGNVNPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       241 ~~~E~-~~~~~~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      +..|. .+.|.++|+.+|...|.+++.+.+.+|++++++|++++.+.+.
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCc
Confidence            33333 3467889999999999999999999999999999999987654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.87  E-value=4.9e-22  Score=177.90  Aligned_cols=170  Identities=25%  Similarity=0.314  Sum_probs=130.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc-hhhhhcccCCCCeEEEEcccccccc-------cCCCEEEEccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih~Ag  189 (290)
                      +||||||+||||++|+++|+++|++|+++++..... .+.+.......+++++.+|+.+...       .++|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            799999999999999999999999999998754333 3333333355789999999987632       24799999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC-CccccCCCCCCCC-----------------CCCCCCC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLQHPQK-----------------ETYWGNV  250 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS-~~vyg~~~~~~~~-----------------E~~~~~~  250 (290)
                      .........++..++++|+.||.|++++|.+.+. ++++.|| .++|+.....+..                 ++...+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            8665556678899999999999999999998885 5555454 5555544333211                 1112355


Q ss_pred             ChhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeeeccc
Q 022900          251 NPIGTYFFSFSLIFLVFISQFRPSRKACRFFILLYRN  287 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~  287 (290)
                      .+|+..|...|.++..+.+.++....++|++++++..
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGR  198 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeecc
Confidence            6789999999999999999999999999999988654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.86  E-value=3.1e-21  Score=174.55  Aligned_cols=174  Identities=19%  Similarity=0.182  Sum_probs=134.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc-------cCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~~vD~vih  186 (290)
                      .++|+|+||||+||||++|++.|+++|++|++++|.................++++.+|+.+...       ..+|+|+|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            46899999999999999999999999999999999765544433333234579999999987643       25899999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCC-CCCCCCCCC-CCCCChhhhhHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDP-LQHPQKETY-WGNVNPIGTYFFSFSL  262 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~-~~~~~~E~~-~~~~~py~~~k~~~e~  262 (290)
                      +|+.........++..++++|+.|+.+++++|++.+.  .+++.||..+|+.. ...+..|+. ..|.+||+..|...|.
T Consensus        86 ~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~  165 (356)
T d1rkxa_          86 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  165 (356)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             hhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchh
Confidence            9998766666778899999999999999999988763  45555555555433 333455544 3578899999999988


Q ss_pred             HHHHHHH---------HhCCCeeEEEeeeeeccc
Q 022900          263 IFLVFIS---------QFRPSRKACRFFILLYRN  287 (290)
Q Consensus       263 ~~~~~~~---------~~gl~~~ilR~~~lr~~~  287 (290)
                      .+..+..         ++++.++++|++++.+..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         166 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             hhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence            8877765         446789999999887643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.84  E-value=2.1e-20  Score=169.24  Aligned_cols=168  Identities=21%  Similarity=0.236  Sum_probs=122.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhc----ccCCCCeEEEEcccccc-----cccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH----HFGNPNFELIRHDVVEP-----LLLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~v~~~~~D~~~~-----~~~~vD~v  184 (290)
                      .+||+|+||||+||||++|+++|+++|++|++++|+.... ..+..    ........++.+|+.+.     .+.++|+|
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhH-HHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence            4589999999999999999999999999999998864221 21211    11233455677888765     45679999


Q ss_pred             EEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCccccCCC--C--CCCCCCCC-----------
Q 022900          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPL--Q--HPQKETYW-----------  247 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~riV~vSS~~vyg~~~--~--~~~~E~~~-----------  247 (290)
                      +|+|+..   ....++...+++|+.||.+++++|.+.+  ++|||+||+++++...  .  ...+|+.|           
T Consensus        88 ~~~a~~~---~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          88 AHIASVV---SFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCC---SCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhhcccc---cccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            9999863   3456678889999999999999999875  4999999987543211  1  12233321           


Q ss_pred             ------CCCChhhhhHHHHHHHHHHHHHHhCC--CeeEEEeeeeec
Q 022900          248 ------GNVNPIGTYFFSFSLIFLVFISQFRP--SRKACRFFILLY  285 (290)
Q Consensus       248 ------~~~~py~~~k~~~e~~~~~~~~~~gl--~~~ilR~~~lr~  285 (290)
                            .+..+|+.+|...|.++..|.++++.  +++++|++++-+
T Consensus       165 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~G  210 (342)
T d1y1pa1         165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIG  210 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEEC
T ss_pred             cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeC
Confidence                  23356999999999999999988764  456677776644

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.3e-19  Score=150.08  Aligned_cols=149  Identities=14%  Similarity=0.152  Sum_probs=110.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      +.+|+|+||||||+||++++++|+++|++|++++|+..+.++.     ...+++++.+|+.+..     +.++|+|||++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~   75 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----cccccccccccccchhhHHHHhcCCCEEEEEe
Confidence            3578999999999999999999999999999999864333221     3467899999998763     56899999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~  267 (290)
                      |.....    ++   .+++..++.++++++++.+. |||++||..+|+.....+.      ...++...+...|    .+
T Consensus        76 g~~~~~----~~---~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~------~~~~~~~~~~~~e----~~  138 (205)
T d1hdoa_          76 GTRNDL----SP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP------RLQAVTDDHIRMH----KV  138 (205)
T ss_dssp             CCTTCC----SC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG------GGHHHHHHHHHHH----HH
T ss_pred             ccCCch----hh---hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccc------cccccchHHHHHH----HH
Confidence            863221    11   13678899999999999995 9999999998865433221      1123444444333    44


Q ss_pred             HHHhCCCeeEEEeeeee
Q 022900          268 ISQFRPSRKACRFFILL  284 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~lr  284 (290)
                      .++.+++++++||+.+-
T Consensus       139 l~~~~~~~tiirp~~~~  155 (205)
T d1hdoa_         139 LRESGLKYVAVMPPHIG  155 (205)
T ss_dssp             HHHTCSEEEEECCSEEE
T ss_pred             HHhcCCceEEEecceec
Confidence            55679999999998774

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.79  E-value=8.7e-19  Score=152.21  Aligned_cols=160  Identities=16%  Similarity=0.079  Sum_probs=121.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.....+...+. ...++..+.+|++++.            ++++
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHH-cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999998653222222111 3467899999998773            4579


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||.......    .+++++++++|+.|++++++++.    +.+ .+||++||.+......          ...+
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~~~~  151 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE----------AYTH  151 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS----------SCHH
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc----------cccc
Confidence            999999998654432    24567899999999999998863    344 4899999986542110          1247


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+...+.+.++.+   +|+.+..+-|+.++
T Consensus       152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~  186 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVR  186 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-
T ss_pred             chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            999999998888888875   47888888887664

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.79  E-value=4.3e-19  Score=154.53  Aligned_cols=162  Identities=12%  Similarity=0.082  Sum_probs=123.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..++....+....++.++.+|++++.            +++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999865444444444434568999999998773            357


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|++|||||........    +++++++++|+.|++++++++.+    .+  .+||++||.+.+-...          ..
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~----------~~  152 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP----------SL  152 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT----------TC
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC----------Cc
Confidence            99999999986544432    34667999999999999998643    33  3799999976532110          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH-----hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ-----FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~-----~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+...+.+.++.+     +|+.+..+-|+.+.
T Consensus       153 ~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~  191 (251)
T d1zk4a1         153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK  191 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC
T ss_pred             hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence            47999999988877776643     47888888887663

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.79  E-value=5.3e-19  Score=154.24  Aligned_cols=160  Identities=14%  Similarity=0.101  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+...+...++  ..++.++.+|++++.            +++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999998654433333332  357899999998763            357


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|++|||||........    +++++++++|+.|++++++++.    +.+ .+||++||.+.+....          ...
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~----------~~~  149 (254)
T d1hdca_          80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----------LTS  149 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCH
T ss_pred             ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc----------chh
Confidence            99999999986544422    3467789999999999999864    333 4999999986542111          124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~  185 (254)
T d1hdca_         150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTY  185 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCccc
Confidence            79999999988888888754   6788888887654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.79  E-value=7.2e-19  Score=153.72  Aligned_cols=159  Identities=15%  Similarity=0.054  Sum_probs=121.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+...+...++   ....++..+.+|++++.            +
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68899999999999999999999999999999998654333322222   23457889999998873            3


Q ss_pred             cCCCEEEEcccCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~  247 (290)
                      +++|++|||||...+..     ..+++++++++|+.|++++++++.    +.+ .+||++||.+.+ +.+          
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------  151 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG----------  151 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS----------
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC----------
Confidence            57999999999753322     223567899999999999998763    233 489999997653 211          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                       ...+|+.+|.+...+.+.++.+   +|+.+..+-|+.+
T Consensus       152 -~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v  189 (258)
T d1iy8a_         152 -NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAI  189 (258)
T ss_dssp             -SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcc
Confidence             1258999999998888888765   4788888888765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=5.8e-19  Score=153.67  Aligned_cols=160  Identities=16%  Similarity=0.126  Sum_probs=121.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------cc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .++++|+++||||+++||.++++.|+++|++|++++|+.+..++...+   ..++.++.+|++++.            ++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE---LPGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---cCCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            347899999999999999999999999999999999864333222222   246888999998763            35


Q ss_pred             CCCEEEEcccCCCCCC-C----CCChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVH-Y----KFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|++|||||...... .    .+++++++++|+.|++++++++.    +.+.+||++||.+.+-...          ..
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~----------~~  148 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------QA  148 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------TC
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc----------Cc
Confidence            7999999999653222 2    23467899999999999999864    3345999999986542111          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+...+.+.++.+   +|+.+..+-|+.+.
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~  185 (250)
T d1ydea1         149 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIW  185 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            58999999998888888875   47888889888663

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.79  E-value=5.7e-19  Score=153.19  Aligned_cols=159  Identities=14%  Similarity=0.091  Sum_probs=121.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+..++...++  ..++.++.+|++++.            +.++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--hCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999998654333333332  346888999998873            3579


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||........    +++++++++|+.|++++++++.    +.+ .+||++||.+.+....          ...+
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------~~~~  151 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------ACHG  151 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHH
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc----------cccc
Confidence            9999999976544332    3467799999999999998753    333 3899999986542111          1247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       152 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~  186 (244)
T d1nffa_         152 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVK  186 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCcc
Confidence            9999999999888888764   7777788776653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=6.9e-19  Score=153.25  Aligned_cols=162  Identities=15%  Similarity=0.046  Sum_probs=122.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+...+...++.  ...++..+.+|++++.            ++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999987544444333332  2457889999998763            35


Q ss_pred             CCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      ++|++|||||.......    .+++++++++|+.|++++++++.+    .+ .+||+++|........         ...
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~---------~~~  153 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM---------PNI  153 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS---------SSC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC---------ccc
Confidence            79999999997544332    235677899999999999998643    33 3899999865321100         012


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~  190 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR  190 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence            47999999998888888865   47888888888663

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.78  E-value=5.2e-19  Score=154.66  Aligned_cols=161  Identities=14%  Similarity=0.014  Sum_probs=122.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+++||.++++.|+++|++|++++|+.....+.+...+   ...++.++.+|++++.            +
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999986433222222211   2457889999998763            3


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +++|++|||||........    +++++++++|+.|++++++++    ++.+ .+||++||.+......          .
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~  151 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----------N  151 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------T
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC----------C
Confidence            5799999999976544432    346779999999999998875    3344 3999999986542111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+...+.+.++.++   |+.+..+.|+.+.
T Consensus       152 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~  189 (260)
T d1x1ta1         152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVR  189 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCC
Confidence            2479999999988888888764   6778888887663

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=3.9e-19  Score=154.12  Aligned_cols=158  Identities=15%  Similarity=0.051  Sum_probs=121.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+..++...++  ..++..+.+|++++.            ++++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL--GANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            68999999999999999999999999999999998643333332222  346888999998763            3579


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~~~  251 (290)
                      |++|||||........    +++++++++|+.+++++++++.    +.+ .+||++||.+.+ +.+           ...
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~~~  148 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG-----------GQA  148 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----------CCH
Confidence            9999999976544432    3467789999999999999864    333 499999998654 321           124


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+.
T Consensus       149 ~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~  184 (243)
T d1q7ba_         149 NYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIE  184 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEe
Confidence            7999999998888888865   47888888887654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.5e-19  Score=152.88  Aligned_cols=149  Identities=15%  Similarity=0.053  Sum_probs=114.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih  186 (290)
                      +++|+|+|||||||||++|+++|+++|.  +|++++|+........     ...++...+|+.+.     .+.++|++||
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeecccccccccccccccccccc
Confidence            5678999999999999999999999995  8999998654332221     23566666777543     3567999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFL  265 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~  265 (290)
                      |+|..   ....++....++|+.++.+++++|++.+. +||++||..+|+..            .++|+.+|...|..+ 
T Consensus        87 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~------------~~~Y~~~K~~~E~~l-  150 (232)
T d2bkaa1          87 CLGTT---RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------------NFLYLQVKGEVEAKV-  150 (232)
T ss_dssp             CCCCC---HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHHHHHHHHH-
T ss_pred             ccccc---ccccchhhhhhhcccccceeeecccccCccccccCCccccccCc------------cchhHHHHHHhhhcc-
Confidence            99852   22334566789999999999999999996 89999998877432            357999888777643 


Q ss_pred             HHHHHhCCC-eeEEEeeeeecc
Q 022900          266 VFISQFRPS-RKACRFFILLYR  286 (290)
Q Consensus       266 ~~~~~~gl~-~~ilR~~~lr~~  286 (290)
                         .+.+.+ ++|+||+.+-+.
T Consensus       151 ---~~~~~~~~~IlRP~~i~G~  169 (232)
T d2bkaa1         151 ---EELKFDRYSVFRPGVLLCD  169 (232)
T ss_dssp             ---HTTCCSEEEEEECCEEECT
T ss_pred             ---ccccccceEEecCceeecC
Confidence               445775 899999988653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=1.5e-18  Score=150.31  Aligned_cols=157  Identities=13%  Similarity=0.084  Sum_probs=119.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+.    +.+.....++..+.+|++++.            +++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~----l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP----LREAAEAVGAHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            3688999999999999999999999999999999985433    222223346778999998763            357


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      +|++|||||...+....    +++++++++|+.|++++.+++.+    .+. .++++||.+..+.+           ...
T Consensus        78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~-----------~~~  146 (242)
T d1ulsa_          78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-----------GQA  146 (242)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-----------TCH
T ss_pred             ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC-----------CCc
Confidence            99999999976544322    35678999999999999998754    233 67777776544422           124


Q ss_pred             hhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~  182 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIE  182 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCccc
Confidence            79999999988888887664   7788888887664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.78  E-value=1e-18  Score=152.56  Aligned_cols=160  Identities=14%  Similarity=0.064  Sum_probs=122.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+..++...++  ..++..+.+|++++.            +++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--GPAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            368999999999999999999999999999999998654444433333  457889999998873            357


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +|++|||||........    +++++++++|+.|++++++++.    +.+  .+||++||.+.+-...          ..
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~~  149 (256)
T d1k2wa_          80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA----------LV  149 (256)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TC
T ss_pred             ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc----------cc
Confidence            99999999976443322    3467789999999999998743    222  3899999986542111          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~  186 (256)
T d1k2wa_         150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVD  186 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence            47999999998888888865   47888888887653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.78  E-value=5.6e-19  Score=154.76  Aligned_cols=151  Identities=21%  Similarity=0.159  Sum_probs=115.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----cc--CCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~--~vD~vih~Ag  189 (290)
                      |+|+||||+||||++|++.|.++|+ ++++++....                ..+|+++..     +.  ++|+|||+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------------FCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------------SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------------ccCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence            5799999999999999999999986 5555543211                124555432     22  5799999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYW-GNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~~-~~~~py~~~k~~~e~~~~~~~  268 (290)
                      .........++...+++|+.++.+++++|++.+++++++||+.+|+.....+..|... .|.++|+.+|...|..+..  
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~--  141 (298)
T d1n2sa_          64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD--  141 (298)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH--
T ss_pred             cccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh--
Confidence            8777778889999999999999999999999989999999999999888888888763 4556777777766655433  


Q ss_pred             HHhCCCeeEEEeeeeecccC
Q 022900          269 SQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~~  288 (290)
                        +.....++|+....+..|
T Consensus       142 --~~~~~~~~~~~~~~~~~~  159 (298)
T d1n2sa_         142 --NCPKHLIFRTSWVYAGKG  159 (298)
T ss_dssp             --HCSSEEEEEECSEECSSS
T ss_pred             --hhcccccccccceeeccC
Confidence              344566777666555444

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.78  E-value=1.2e-18  Score=152.98  Aligned_cols=163  Identities=12%  Similarity=0.109  Sum_probs=123.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..++...++.....+.++.+|++++.            +++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999875444444444444567888999998763            357


Q ss_pred             CCEEEEcccCCCCCC--C-C---CChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVH--Y-K---FNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       181 vD~vih~Ag~~~~~~--~-~---~~~~~~~~~Nv~gt~~ll~a~~~----~~~-riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +|++|||||......  . +   ++++.++++|+.|++++++++.+    .+. ++|++||.+.+-....         .
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~---------~  153 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG---------V  153 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT---------S
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc---------c
Confidence            999999999754321  1 1   34677899999999999988643    333 8999998765421111         1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~  191 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVA  191 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCS
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCcc
Confidence            236999999998888888865   47888888887654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.7e-18  Score=151.11  Aligned_cols=162  Identities=15%  Similarity=0.117  Sum_probs=123.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      .++++|+++||||+++||.++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            +
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999986543333333332 2457899999998863            3


Q ss_pred             cCCCEEEEcccCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~---~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      +++|++|||||...+...+   +++++++++|+.|++++++++.    +.+ .+||++||.+.+....          ..
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~----------~~  156 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI----------NM  156 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT----------TC
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccc----------cc
Confidence            5799999999976554433   3467789999999999988763    333 3899999976543211          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+.+.+.+.++.++   |+.+..+-|+.+
T Consensus       157 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i  192 (255)
T d1fmca_         157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI  192 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred             ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcC
Confidence            479999999988888888664   777888888765

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.4e-19  Score=152.45  Aligned_cols=162  Identities=9%  Similarity=-0.022  Sum_probs=122.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      ++..||+++||||+++||++++++|+++|++|++++|+.++.++...++. ...++..+.+|+++++            +
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999986544443333332 3467999999998873            4


Q ss_pred             cCCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~----~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      +++|++|||||........+    ++++++++|+.|+.++++++    ++.+. +||++||.+.+-..     .     .
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~-----~-----~  152 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----P-----F  152 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----H-----H
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-----C-----C
Confidence            56999999999865544332    35678999999999998875    34443 89999998654211     0     1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh------CCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF------RPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~------gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+...+.+.++.+.      |+.+..+-|+.+
T Consensus       153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v  192 (244)
T d1yb1a_         153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFV  192 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC
Confidence            1369999999888888887652      577777777654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1e-18  Score=153.45  Aligned_cols=165  Identities=22%  Similarity=0.298  Sum_probs=125.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEc-ccccc-----cccCCCEEEEcccCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVVEP-----LLLEVDQIYHLACPA  191 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~-D~~~~-----~~~~vD~vih~Ag~~  191 (290)
                      |+||||+||||++|+++|+++|+ .|+++++.....+.  .........+.... |..+.     ....+++|+|+|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh--hcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            89999999999999999999996 79998865433222  11112222333332 32222     345689999999853


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                      .  ....+...+.+.|+.++.+++++++..++++++.||..+|+.+......|+. ..+.++|+.+|...|.++..+.++
T Consensus        80 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~  157 (307)
T d1eq2a_          80 S--TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (307)
T ss_dssp             C--TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence            2  3455677788999999999999999999889999998888766665554444 356789999999999999999999


Q ss_pred             hCCCeeEEEeeeeeccc
Q 022900          271 FRPSRKACRFFILLYRN  287 (290)
Q Consensus       271 ~gl~~~ilR~~~lr~~~  287 (290)
                      ++++++++|++++.+..
T Consensus       158 ~~~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         158 ANSQIVGFRYFNVYGPR  174 (307)
T ss_dssp             CSSCEEEEEECEEESSS
T ss_pred             cccccccccceeEeecc
Confidence            99999999999998754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=1.8e-18  Score=150.29  Aligned_cols=156  Identities=17%  Similarity=0.119  Sum_probs=119.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      ++||+++||||+++||+++++.|+++|++|++++|+.+. .+....    ....++.+|++++.            ++++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA----IGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH----HTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHH----cCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999999986432 222221    24567899998763            3579


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      |++|||||...+....    +++++++++|+.|++++++++.    +.+ .+||++||.+.+-..          ....+
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~----------~~~~~  147 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------QENAA  147 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------TTBHH
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc----------cccch
Confidence            9999999976554432    3467799999999999999864    333 389999998754211          02257


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      |+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~  182 (248)
T d2d1ya1         148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA  182 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence            999999998888888876   47888888887653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.77  E-value=1.9e-18  Score=151.01  Aligned_cols=161  Identities=12%  Similarity=0.010  Sum_probs=122.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+..++...++. ...++.++.+|++++.            +.
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999986544444443332 3457888999998762            33


Q ss_pred             -CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 -EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 -~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                       ++|++|||||........    +++++++++|+.|++++++++.    +.+. +||++||........          .
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------~  154 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP----------Y  154 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT----------T
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc----------c
Confidence             599999999976444322    3467799999999999998764    3333 899999976532111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+
T Consensus       155 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i  191 (259)
T d2ae2a_         155 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI  191 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcc
Confidence            257999999999999988876   4777888888765

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.77  E-value=1.9e-18  Score=151.29  Aligned_cols=162  Identities=14%  Similarity=0.008  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~  178 (290)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+...+.+.+.+  ...++..+.+|++++.            +
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999986533222222222  3457889999998773            3


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~  248 (290)
                      +++|++|||||...+...    .+++++++++|+.|++++++++.    +.+  ..||++||.+......          
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~----------  153 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP----------  153 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc----------
Confidence            579999999998654443    23567789999999999988753    333  2699999976542110          


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~  192 (261)
T d1geea_         154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN  192 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCc
Confidence            1247999999998888888765   47888888887664

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.77  E-value=1.2e-18  Score=152.42  Aligned_cols=161  Identities=16%  Similarity=0.106  Sum_probs=121.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            ++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999999986443333333322 2457899999998763            35


Q ss_pred             CCCEEEEcccCCCCC-CC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPV-HY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~-~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||..... ..    .+++++++++|+.+++++++++.    +.+ .+||++||.+.+....          .
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------~  151 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------N  151 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------T
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc----------c
Confidence            799999999975332 22    23467799999999999998864    333 3999999986542111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+.+.++.++   |+.+..+-|+.+
T Consensus       152 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v  188 (260)
T d1zema1         152 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYM  188 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcc
Confidence            2479999999988888888764   677888888765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.77  E-value=2.9e-18  Score=147.99  Aligned_cols=150  Identities=16%  Similarity=0.076  Sum_probs=114.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+++||.++++.|+++|++|++++|+....          .++..+.+|++++.            ++++
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            7899999999999999999999999999999999864322          34567889998773            3579


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEcCCccc-cCCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVY-GDPLQHPQKETYWGNVN  251 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~-riV~vSS~~vy-g~~~~~~~~E~~~~~~~  251 (290)
                      |++|||||...+...    .+++++++++|+.+++.+++++    ++.+. +||++||.+.+ +..           ...
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-----------~~~  143 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-----------NQA  143 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCH
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc-----------ccH
Confidence            999999997654442    2356779999999999998865    34443 89999997654 211           124


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+.
T Consensus       144 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~  179 (237)
T d1uzma1         144 NYAASKAGVIGMARSIARELSKANVTANVVAPGYID  179 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCC
Confidence            7999999998888888876   47788888887653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.4e-18  Score=148.95  Aligned_cols=159  Identities=16%  Similarity=0.105  Sum_probs=119.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQI  184 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~v  184 (290)
                      +++||+++||||+++||+++++.|+++|++|++++|+.+...+...+   ...+..+.+|++++.        ++++|++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~g~iDil   78 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---CPGIEPVCVDLGDWDATEKALGGIGPVDLL   78 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---cCCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence            36899999999999999999999999999999999864332222222   246788899998773        4679999


Q ss_pred             EEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----c-C-CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          185 YHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----V-G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       185 ih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~-~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |||||.......    .++++.++++|+.+++++++++.+    . . .+||++||.+.+....          ...+|+
T Consensus        79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y~  148 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------NLITYS  148 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred             EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC----------cccccc
Confidence            999997654432    234677899999999999887532    2 2 3899999986543211          124799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      .+|.+.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~  181 (242)
T d1cyda_         149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVL  181 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBT
T ss_pred             chHHHHHHHHHHHHHHhCccCeecccCCCCCcc
Confidence            99999998888888764   6777788777653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.77  E-value=1e-18  Score=152.10  Aligned_cols=161  Identities=12%  Similarity=-0.046  Sum_probs=123.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------cc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~  179 (290)
                      .+++|+++||||+++||.++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            ++
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999999999999986444333333332 2357899999998873            45


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWGN  249 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~  249 (290)
                      ++|++|||||........    +++++++++|+.+++++++++.    +.+ .+||++||.+.+ +..           .
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~  155 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------G  155 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC-----------C
Confidence            799999999976444432    3567799999999999998753    344 499999998654 211           1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~  193 (251)
T d2c07a1         156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFIS  193 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEe
Confidence            247999999999888888875   47888888887664

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.8e-18  Score=148.72  Aligned_cols=160  Identities=18%  Similarity=0.120  Sum_probs=120.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQ  183 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~  183 (290)
                      ..++||+++||||+++||+++++.|+++|++|++++|+.+..++...+   ...+..+.+|++++.        ++++|+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---CPGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh---cCCCeEEEEeCCCHHHHHHHHHHhCCceE
Confidence            347899999999999999999999999999999999864333332222   245788899998773        457999


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH-----cC-CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR-----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~-----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +|||||.......    .+++++++++|+.++.++++++.+     .+ .+||++||.+......          ....|
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~----------~~~~Y  149 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT----------NHSVY  149 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc----------chhhh
Confidence            9999997654432    245677999999999999887532     22 3899999986543111          12479


Q ss_pred             hhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          254 GTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+|.+.+.+.+.++.++   |+++..+-|+.+.
T Consensus       150 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~  183 (244)
T d1pr9a_         150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVM  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             hhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCc
Confidence            999999988888888764   7788888887653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.76  E-value=2.4e-18  Score=150.13  Aligned_cols=159  Identities=14%  Similarity=0.034  Sum_probs=120.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      .+|+++||||+++||.++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            ++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999999999986444333333332 2457899999998773            4579


Q ss_pred             CEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH------cC-CeEEEEcCCccccCCCCCCCCCCCCCCC
Q 022900          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR------VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (290)
Q Consensus       182 D~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~------~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~  250 (290)
                      |++|||||.......    .+++++++++|+.|++++++++.+      .+ .+||++||...+....          ..
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~----------~~  150 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV----------HA  150 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT----------TC
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc----------cc
Confidence            999999997654432    234678999999999999998754      23 3899999976542111          12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                      .+|+.+|.+...+.+.++.++   |+.+..+-|+.+
T Consensus       151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i  186 (257)
T d2rhca1         151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFV  186 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSB
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCC
Confidence            479999999999999999875   556666666654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.76  E-value=7.1e-19  Score=153.37  Aligned_cols=149  Identities=19%  Similarity=0.216  Sum_probs=119.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cc--cCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL--LEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~--~~vD~vih~Ag  189 (290)
                      |+|+|||||||||++|+++|.++|++|++++|..                    .|+.+.     .+  .++|+|||+|+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~~~d~vih~a~   61 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------LDITNVLAVNKFFNEKKPNVVINCAA   61 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------ccCCCHHHHHHHHHHcCCCEEEeecc
Confidence            5799999999999999999999999999998742                    133332     22  25899999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCCCCCCCCCCC-CCCCChhhhhHHHHHHHHHHHH
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETY-WGNVNPIGTYFFSFSLIFLVFI  268 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~~~~~~~E~~-~~~~~py~~~k~~~e~~~~~~~  268 (290)
                      ..........+...+..|+..+.++.+.+......++++||..+|+.....+..|.. +.+..+|+..+...|    .+.
T Consensus        62 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e----~~~  137 (281)
T d1vl0a_          62 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGE----NFV  137 (281)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHH----HHH
T ss_pred             ccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHH----HHH
Confidence            866666667788889999999999999999988899999999999988888888776 344556666665444    445


Q ss_pred             HHhCCCeeEEEeeeeecccCC
Q 022900          269 SQFRPSRKACRFFILLYRNGA  289 (290)
Q Consensus       269 ~~~gl~~~ilR~~~lr~~~~~  289 (290)
                      ++++.+.+++|++++.+.++.
T Consensus       138 ~~~~~~~~i~R~~~vyG~~~~  158 (281)
T d1vl0a_         138 KALNPKYYIVRTAWLYGDGNN  158 (281)
T ss_dssp             HHHCSSEEEEEECSEESSSSC
T ss_pred             HHhCCCccccceeEEeCCCcc
Confidence            567999999999999776643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.76  E-value=2.1e-18  Score=150.34  Aligned_cols=160  Identities=15%  Similarity=0.062  Sum_probs=120.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||.++++.|+++|++|++.+|+.+..++...++  ..+..++.+|++++.            +.+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999998643333333332  356888999998763            357


Q ss_pred             CCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|++|||||...+....    +++++++++|+.|++++++++.+    .+.+||++||.+.+-..          ....+
T Consensus        81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~----------~~~~~  150 (253)
T d1hxha_          81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI----------EQYAG  150 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC----------TTBHH
T ss_pred             CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc----------ccccc
Confidence            99999999976544332    34678999999999999888643    33489999997653211          01247


Q ss_pred             hhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF-----RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~lr  284 (290)
                      |+.+|.+...+.+.++.++     ++.+..+-|+.+.
T Consensus       151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~  187 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIY  187 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEEC
T ss_pred             ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCc
Confidence            9999999888877776543     4777778777653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.75  E-value=4.3e-18  Score=148.38  Aligned_cols=157  Identities=16%  Similarity=0.046  Sum_probs=118.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccCCCE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVDQ  183 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~vD~  183 (290)
                      |.++||||+++||.++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            ++++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            567999999999999999999999999999986544333333322 2457899999998773            457999


Q ss_pred             EEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       184 vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      +|||||.......    .+++++++++|+.|++++++++.    +.+  .+||++||.+.+....          ...+|
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------~~~~Y  151 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------ELAVY  151 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc----------ccccc
Confidence            9999997644332    23467799999999999998753    333  3799999976542111          12479


Q ss_pred             hhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          254 GTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      +.+|.+.+.+.+.++.+   +|+.+..+-|+.+
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i  184 (255)
T d1gega_         152 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIV  184 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             hhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcc
Confidence            99999998888888865   4778888888765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=5e-18  Score=148.39  Aligned_cols=161  Identities=12%  Similarity=-0.003  Sum_probs=115.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c-
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L-  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~-  178 (290)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..++...++. ...++..+.+|++++.            + 
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999986544444333332 3457999999998762            2 


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ..+|++|||||...+....    +++++++++|+.|++++++++.    +.+ .+||++||....-...          .
T Consensus        85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~  154 (259)
T d1xq1a_          85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS----------V  154 (259)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred             CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc----------c
Confidence            3599999999976444322    3467799999999999998763    333 4999999976432110          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      ..+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i  191 (259)
T d1xq1a_         155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVI  191 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSC
T ss_pred             cccccccccchhhhhHHHHHHhcccCeEEEEeccCcc
Confidence            257999999998888888876   4788888887765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.75  E-value=1.3e-17  Score=145.30  Aligned_cols=158  Identities=13%  Similarity=-0.011  Sum_probs=120.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh--hhcccCCCCeEEEEccccc-c------------c
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHFGNPNFELIRHDVVE-P------------L  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~v~~~~~D~~~-~------------~  177 (290)
                      ++++|+|+||||+++||.+++++|+++|++|++++|+.+.....  +.......++.+..+|++. .            .
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999998865443222  1122245578999999973 3            1


Q ss_pred             ccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH----c----CCeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----V----GARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~----~~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ++++|++|||||..    ..+++++++++|+.|++++++++.+    .    +.+||++||.+.+....          .
T Consensus        82 ~g~iDilvnnAG~~----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~----------~  147 (254)
T d1sbya1          82 LKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH----------Q  147 (254)
T ss_dssp             HSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------T
T ss_pred             cCCCCEEEeCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC----------C
Confidence            35699999999953    4677899999999999999998643    1    13799999976642111          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...|+.+|.+...+.+.++.+   +|+.+..+-|+.++
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~  185 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR  185 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCc
Confidence            247999999987777777754   48888888887764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.74  E-value=8.3e-18  Score=146.91  Aligned_cols=170  Identities=14%  Similarity=-0.038  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      .++++|+++||||+++||.++++.|+++|++|++++|+.....+...++.  ...++..+.+|++++.            
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998766555444432  2457899999998773            


Q ss_pred             ccCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHH----c-CC-eEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----V-GA-RFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~-riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      ++++|++|||||.......    .+++++++++|+.|++++++++.+    . .. .++.++|...+..........   
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~---  161 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS---  161 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE---
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC---
Confidence            4579999999997644332    234677999999999999887532    2 23 677777765543221110000   


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~  201 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVN  201 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCccc
Confidence            01247999999998888888765   47778888877653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=8.8e-18  Score=149.61  Aligned_cols=161  Identities=13%  Similarity=0.065  Sum_probs=121.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc------CCCCeEEEEccccccc---------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF------GNPNFELIRHDVVEPL---------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~---------  177 (290)
                      .+++|+++||||+++||.++++.|+++|++|++++|+.+..++...++.      ...++..+.+|++++.         
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999999986544333322221      2457899999998773         


Q ss_pred             ---ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEcCCccccCCCCCCCCCC
Q 022900          178 ---LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 ---~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~----~-~riV~vSS~~vyg~~~~~~~~E~  245 (290)
                         ++++|++|||||........    +++++++++|+.|++++++++.+.    + .+||++||....+.+        
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~--------  160 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP--------  160 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT--------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccc--------
Confidence               35799999999975443322    346778999999999999987543    2 378888765433321        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ...+|+.+|.+.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       161 ---~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~  199 (297)
T d1yxma1         161 ---LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIY  199 (297)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred             ---ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCc
Confidence               12579999999998888888764   7888888887663

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.74  E-value=1.7e-17  Score=145.83  Aligned_cols=160  Identities=13%  Similarity=0.062  Sum_probs=118.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+..++...++.    ...++..+.+|++++.            
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999986544333333332    2346899999998763            


Q ss_pred             ccCCCEEEEcccCCCCCCC-----CC---ChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcC-Ccc-ccCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHY-----KF---NPVKTIKTNVVGTLNMLGLAKR----VGARFLLTST-SEV-YGDPLQHPQK  243 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~-----~~---~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS-~~v-yg~~~~~~~~  243 (290)
                      ++++|++|||||...+...     +.   ++++++++|+.|++++++++.+    .+..+|+++| .+. .+.+      
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~------  156 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP------  156 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC------
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCC------
Confidence            3579999999997654332     11   3677899999999999998643    3345666555 332 2211      


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                           ...+|+.+|.+...+.+.++.+   +|+.+..+-|+.+.
T Consensus       157 -----~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~  195 (272)
T d1xkqa_         157 -----DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE  195 (272)
T ss_dssp             -----SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred             -----CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence                 1247999999998888888865   47888888888764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.74  E-value=7.1e-18  Score=145.80  Aligned_cols=158  Identities=9%  Similarity=-0.020  Sum_probs=117.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCe-------EEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc-----------
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDS-------VIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~-------V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~-----------  177 (290)
                      +.|+||||+++||+++++.|+++|++       |++.+|+.+..++...++. ...++..+.+|++++.           
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999987       8888876443333333332 2457889999998873           


Q ss_pred             -ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                       ++++|++|||||........    +++++++++|+.|++++++++.    +.+ .+||++||.+.+....         
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------  152 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR---------  152 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC---------
Confidence             45799999999976544422    3467799999999999988864    334 4899999986543111         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.++
T Consensus       153 -~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~  191 (240)
T d2bd0a1         153 -HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVY  191 (240)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             -CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCccc
Confidence             1247999999998888888776   46777777777653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.74  E-value=1.2e-17  Score=146.25  Aligned_cols=160  Identities=11%  Similarity=0.015  Sum_probs=116.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..++...++.    ...++..+.+|++++.            
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999986544433333322    2346899999998773            


Q ss_pred             ccCCCEEEEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCc-cc-cCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSE-VY-GDPLQHPQK  243 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~riV~vSS~~-vy-g~~~~~~~~  243 (290)
                      ++++|++|||||...+..        ..++++.++++|+.|++++++++.+    .+..+|+++|+. .+ +.+      
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~------  156 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP------  156 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT------
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC------
Confidence            357999999999753222        1234677999999999999988643    334666666643 22 211      


Q ss_pred             CCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          244 ETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       244 E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                           ...+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       157 -----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~  195 (264)
T d1spxa_         157 -----DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA  195 (264)
T ss_dssp             -----TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             -----CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence                 1136999999998888888865   48888888888663

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.73  E-value=1.9e-17  Score=145.92  Aligned_cols=158  Identities=18%  Similarity=0.105  Sum_probs=116.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+...+...+.  ..++..+.+|++++.            +.+
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH--GDNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            368999999999999999999999999999999998643333322222  357889999998763            457


Q ss_pred             CCEEEEcccCCCCCCC-----CC----ChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccc-cCCCCCCCCCCC
Q 022900          181 VDQIYHLACPASPVHY-----KF----NPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVY-GDPLQHPQKETY  246 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~-----~~----~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vy-g~~~~~~~~E~~  246 (290)
                      +|++|||||.......     .+    ++++++++|+.|++++++++.    +.+.++|+++|...+ +.+         
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~---------  150 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG---------  150 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS---------
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC---------
Confidence            9999999996532221     11    267889999999999988863    344588888886543 211         


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHHhC--CCeeEEEeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQFR--PSRKACRFFIL  283 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~~g--l~~~ilR~~~l  283 (290)
                        ...+|+.+|.+.+.+.+.++.+++  +.+..+-|+.+
T Consensus       151 --~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i  187 (276)
T d1bdba_         151 --GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGI  187 (276)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCE
Confidence              124799999999888888887764  45556666554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.5e-17  Score=144.74  Aligned_cols=156  Identities=15%  Similarity=0.035  Sum_probs=118.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------cc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +||+++||||+++||.++++.|+++|++|++++|+.+...+...++.   ...++.++.+|++++.            ++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999987544443333332   3457899999998863            35


Q ss_pred             CCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH----cC----CeEEEEcCCccccCCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----VG----ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~----~riV~vSS~~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|++|||||..    ...++++++++|+.+++++.+++.+    .+    .+||++||.+.+-...          ...
T Consensus        82 ~iDilVnnAg~~----~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~----------~~~  147 (254)
T d2gdza1          82 RLDILVNNAGVN----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------QQP  147 (254)
T ss_dssp             CCCEEEECCCCC----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------TCH
T ss_pred             CcCeeccccccc----ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC----------Ccc
Confidence            799999999964    3467899999999999998888643    21    2699999986532110          124


Q ss_pred             hhhhhHHHHHHHHHH--HHH---HhCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLV--FIS---QFRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~--~~~---~~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+.+.  ++.   .+|+++..+-|+.++
T Consensus       148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~  185 (254)
T d2gdza1         148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN  185 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCC
Confidence            799999988887765  232   457888888887763

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.73  E-value=1.1e-17  Score=144.94  Aligned_cols=157  Identities=14%  Similarity=-0.008  Sum_probs=117.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------ccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~~vD  182 (290)
                      +.|+||||+++||++++++|+++|++|++.+++.....+.+.+.+  ...++..+.+|++++.            ++++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            379999999999999999999999999987664333222222221  2457889999998773            35799


Q ss_pred             EEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccc-cCCCCCCCCCCCCCCCCh
Q 022900          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       183 ~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~~~~p  252 (290)
                      ++|||||.......    .+++++++++|+.|++++++++.    +.+ .+||++||.+.+ +..           ....
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~~~~  150 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----------GQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC-----------CCHH
Confidence            99999997654432    24567899999999999988863    334 399999998754 321           1247


Q ss_pred             hhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      |+.+|.+...+.+.++.++   |+.+..+-|+.+.
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~  185 (244)
T d1edoa_         151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIA  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHChHHHHHHHhhhCcEEEEEecceec
Confidence            9999999988888888764   7788888877653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.7e-17  Score=144.80  Aligned_cols=162  Identities=12%  Similarity=0.000  Sum_probs=119.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+++||.++++.|+++|++|++++|+.++.++...++.   ...++..+.+|+++++            +
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            789999999999999999999999999999999986544343333332   2347889999998873            4


Q ss_pred             cCCCEEEEcccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC---CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG---ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~---~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +++|++|||||...+...    .+++++.+++|+.+.+++.+++.    +.+   .+||++||.+-+...   |..    
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---p~~----  160 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---PLS----  160 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---SCG----
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---CCc----
Confidence            579999999997644332    23467789999999999887753    333   489999998654211   000    


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH-----hCCCeeEEEeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ-----FRPSRKACRFFIL  283 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~-----~gl~~~ilR~~~l  283 (290)
                       ....|+..|.+...+.+.++.+     +++.+..+-|+.+
T Consensus       161 -~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i  200 (257)
T d1xg5a_         161 -VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV  200 (257)
T ss_dssp             -GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB
T ss_pred             -ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCC
Confidence             1135999999988888887754     4677777777654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.72  E-value=2.1e-17  Score=145.47  Aligned_cols=161  Identities=12%  Similarity=-0.010  Sum_probs=118.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc----CCCCeEEEEccccccc------------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~------------  177 (290)
                      +++|+++||||+++||.++++.|+++|++|++++|+.+..++...++.    ...++..+.+|++++.            
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999986443333333222    2246899999998873            


Q ss_pred             ccCCCEEEEcccCCCCCC--C----CCChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCCccccCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVH--Y----KFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETY  246 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~--~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~~-riV~vSS~~vyg~~~~~~~~E~~  246 (290)
                      ++++|++|||||......  .    .+++++++++|+.+++++++++.+    .+. +|+++||.+.+....        
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~--------  153 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS--------  153 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT--------
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC--------
Confidence            357999999999643222  1    134678999999999999988643    333 777777754332111        


Q ss_pred             CCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          247 WGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       247 ~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                        ....|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+.
T Consensus       154 --~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~  192 (274)
T d1xhla_         154 --GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA  192 (274)
T ss_dssp             --TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             --CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCc
Confidence              1246999999988888887765   48888898888763

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.72  E-value=3.5e-17  Score=142.87  Aligned_cols=162  Identities=14%  Similarity=0.065  Sum_probs=123.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c-
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L-  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~-  178 (290)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+..++....+. ...++.++.+|++++.            + 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3689999999999999999999999999999999987544333333332 3467888999998763            2 


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                      ..+|++|||||........    +++.+++++|+.+++++.+++..    .+ .+||++||.+......          .
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~----------~  152 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP----------S  152 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT----------T
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc----------c
Confidence            2489999999976543332    35677999999999999987643    33 3999999987643211          1


Q ss_pred             CChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..+|+..|.+.+.+.+.++.++   |+.+..+.|+.+.
T Consensus       153 ~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~  190 (258)
T d1ae1a_         153 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVIL  190 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCccc
Confidence            2479999999999888888764   6778888887653

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.72  E-value=1.3e-17  Score=144.16  Aligned_cols=158  Identities=18%  Similarity=0.115  Sum_probs=119.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~v  181 (290)
                      +++|+++||||+++||.++++.|+++|++|++.+|+.+...+...+.  ..++.++.+|+.++.            ++++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            68999999999999999999999999999999998654444333332  457888999998763            3579


Q ss_pred             CEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          182 DQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      |++|||||........    +++.+++++|+.++.++++++.+..   ..++++||.+..+.+           ...+|+
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~-----------~~~~Y~  149 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-----------GLAHYA  149 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-----------HHHHHH
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc-----------Cccccc
Confidence            9999999976443322    3457789999999999999986644   256556655432211           113699


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..|.+.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       150 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~  182 (241)
T d2a4ka1         150 AGKLGVVGLARTLALELARKGVRVNVLLPGLIQ  182 (241)
T ss_dssp             HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBC
T ss_pred             hhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCC
Confidence            99999999999998875   5788888888764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.72  E-value=6.6e-17  Score=139.99  Aligned_cols=162  Identities=14%  Similarity=-0.007  Sum_probs=116.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH---HCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------------c
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLI---ARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------------L  178 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------------~  178 (290)
                      ||+|+||||+++||.+++++|+   ++|++|++.+|+.+..++.........++.++.+|++++.              .
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            6899999999999999999997   4799999999987655443222223568999999998763              2


Q ss_pred             cCCCEEEEcccCCCCCC--CCC---ChHHHHHHHHHHHHHHHHHHHH----c------------CCeEEEEcCCccccCC
Q 022900          179 LEVDQIYHLACPASPVH--YKF---NPVKTIKTNVVGTLNMLGLAKR----V------------GARFLLTSTSEVYGDP  237 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~--~~~---~~~~~~~~Nv~gt~~ll~a~~~----~------------~~riV~vSS~~vyg~~  237 (290)
                      .++|++|||||......  .+.   ++++++++|+.|++.+++++..    .            +.++|++||..-.  .
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence            45999999999754332  222   2566899999999999887532    1            2389999996422  1


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+.     .....|+.+|.+...+.+.++.+   +|+.+..+-|+.++
T Consensus       160 ~~~~~-----~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~  204 (248)
T d1snya_         160 QGNTD-----GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK  204 (248)
T ss_dssp             TTCCS-----CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred             CCCCC-----CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence            11110     11237999999988888777755   36888888777654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=3.3e-17  Score=137.94  Aligned_cols=143  Identities=15%  Similarity=0.118  Sum_probs=105.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEccc---ccccccCCCEEEEcccCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---VEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~---~~~~~~~vD~vih~Ag~~  191 (290)
                      |+|+|||||||||++++++|+++|+  +|+++.|+....         ..+++....|+   .+.....+|+||||+|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------cccccccccchhhhhhccccchheeeeeeeee
Confidence            7999999999999999999999998  677766643221         12333333343   233345689999999853


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ  270 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~  270 (290)
                        .....+...+.++|+.++.+++++|++.+. +++++||.++|+.            +.++|..+|...|+.+    .+
T Consensus        74 --~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~------------~~~~y~~~K~~~E~~l----~~  135 (212)
T d2a35a1          74 --IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------SSIFYNRVKGELEQAL----QE  135 (212)
T ss_dssp             --HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHH----TT
T ss_pred             --ccccccccccccchhhhhhhcccccccccccccccccccccccc------------cccchhHHHHHHhhhc----cc
Confidence              222345677889999999999999999985 8999999888753            2357888888776644    34


Q ss_pred             hCCC-eeEEEeeeeecc
Q 022900          271 FRPS-RKACRFFILLYR  286 (290)
Q Consensus       271 ~gl~-~~ilR~~~lr~~  286 (290)
                      .+.+ ++|+||+.+.+.
T Consensus       136 ~~~~~~~I~Rp~~v~G~  152 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGP  152 (212)
T ss_dssp             SCCSEEEEEECCSEEST
T ss_pred             cccccceeeCCcceeCC
Confidence            5664 899999988653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.72  E-value=6.5e-17  Score=141.93  Aligned_cols=165  Identities=15%  Similarity=0.008  Sum_probs=123.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc-----------
Q 022900          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----------  177 (290)
Q Consensus       111 ~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~-----------  177 (290)
                      ..+++||+++||||+++||+++++.|+++|++|++++++.....+.+.+.+  ...++.++.+|+++++           
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            355899999999999999999999999999999999886433322222221  3467999999998863           


Q ss_pred             -ccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~  249 (290)
                       ++++|++|||||........    .++.+++++|+.+++++++++.+..   .++++++|+.....         ....
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~---------~~~~  163 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK---------AVPK  163 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS---------SCSS
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc---------cccc
Confidence             35799999999976544322    3456789999999999999987643   37888877542210         0012


Q ss_pred             CChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          250 VNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       250 ~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..+|+.+|.+.+.+++.++.+   +|+++..+.|+.++
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~  201 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIK  201 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcC
Confidence            246999999988888888875   48899999998774

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.71  E-value=4.2e-17  Score=140.24  Aligned_cols=153  Identities=11%  Similarity=0.058  Sum_probs=114.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~vD~vih~  187 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.    +.+.+    ...+++.+|+.+.      .++++|++|||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~----~~l~~----~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE----ELLKR----SGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHH----TCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH----HHHHh----cCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            5789999999999999999999999999999999752    33322    2345677888664      45689999999


Q ss_pred             ccCCCCCCC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHH
Q 022900          188 ACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFF  258 (290)
Q Consensus       188 Ag~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~  258 (290)
                      ||.......    .+++++++++|+.++.++++++.    +.+ .++|+++|........          ....|+.+|.
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~----------~~~~Y~asKa  143 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE----------NLYTSNSARM  143 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc----------ccccchhHHH
Confidence            997544332    23467789999999999988763    334 3899999976543111          2246888999


Q ss_pred             HHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          259 SFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       259 ~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      +.+.+.+.++.++   |+.+..+-|+.+.
T Consensus       144 al~~ltk~lA~ela~~gIrVN~I~PG~v~  172 (234)
T d1o5ia_         144 ALTGFLKTLSFEVAPYGITVNCVAPGWTE  172 (234)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhcccCeEEeecccCccc
Confidence            8888888888764   7788888887653

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.6e-16  Score=137.48  Aligned_cols=156  Identities=14%  Similarity=-0.006  Sum_probs=119.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------~~~vD~vi  185 (290)
                      +++|+++||||+++||+++++.|+++|++|++++|+.    +.+.+......+.....|+..+.        +.++|++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~----~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE----SKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHhccCCceeeeeccccccccccccccccceeEE
Confidence            7899999999999999999999999999999999853    33344444456777777876543        35799999


Q ss_pred             EcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEcCCcc--ccCCCCCCCCCCCCCCCChhh
Q 022900          186 HLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV--YGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       186 h~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~-~riV~vSS~~v--yg~~~~~~~~E~~~~~~~py~  254 (290)
                      ||||...+....    ++++..+++|+.++..+++++.+    .+ .+||++||...  .+.           .....|+
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-----------~~~~~Y~  148 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-----------VNRCVYS  148 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-----------TTBHHHH
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCc-----------cchhHHH
Confidence            999976544322    34677899999999999887643    33 38999998642  111           1225799


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          255 TYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                      ..|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       149 ~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~  181 (245)
T d2ag5a1         149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVD  181 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEE
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeceee
Confidence            99999999999988764   7788888887664

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.9e-17  Score=145.58  Aligned_cols=169  Identities=17%  Similarity=0.081  Sum_probs=117.4

Q ss_pred             CCE-EEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------ccC
Q 022900          116 GLR-IVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       116 ~k~-VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      ||+ ++||||+++||.+++++|+++ |++|++.+|+.++.++...++. ...++.++.+|+++..            +++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            445 499999999999999999986 8999999997655444444332 3457899999998763            357


Q ss_pred             CCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccc-cCCCCCC-----------
Q 022900          181 VDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVY-GDPLQHP-----------  241 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vy-g~~~~~~-----------  241 (290)
                      +|++|||||...+.....    +++.++++|+.|++++++++.+..   .+||++||.+.. +.....+           
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            999999999865544433    345689999999999999987643   389999997532 1110000           


Q ss_pred             -------------------CCCCCCCCCChhhhhHHHHHHHHHHHHHHh-------CCCeeEEEeeeee
Q 022900          242 -------------------QKETYWGNVNPIGTYFFSFSLIFLVFISQF-------RPSRKACRFFILL  284 (290)
Q Consensus       242 -------------------~~E~~~~~~~py~~~k~~~e~~~~~~~~~~-------gl~~~ilR~~~lr  284 (290)
                                         .......+...|+.+|.....+.+.++.++       ++.+..+-|+.++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~  230 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  230 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence                               000011133569999988777666555443       6777777776543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.70  E-value=5.2e-17  Score=141.65  Aligned_cols=161  Identities=16%  Similarity=0.019  Sum_probs=119.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      +.||+|+||||+++||.++++.|+++|++|++.++......+.+.+.+  ...++..+.+|++++.            +.
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999999999988765433323322222  3457899999998763            34


Q ss_pred             CCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCC-ccccCCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTS-EVYGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~-~vyg~~~~~~~~E~~~~~~~  251 (290)
                      ++|++|||||........    +++++++++|+.+.+++++++.+..   .++++++|. +.+...     .     ...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~-----~-----~~~  153 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-----P-----NHA  153 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----C-----SCH
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC-----C-----Cch
Confidence            699999999976444322    3457789999999999999987643   256666654 333211     1     124


Q ss_pred             hhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +|+.+|.+.+.+++.++.+   +|+.+..+.|+.+.
T Consensus       154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~  189 (259)
T d1ja9a_         154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK  189 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence            7999999998888888875   47888899888764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=4.2e-17  Score=145.47  Aligned_cols=161  Identities=13%  Similarity=0.033  Sum_probs=114.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC-----chhhhhcccC--CCCeEEEEcccccc--------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-----RKENVMHHFG--NPNFELIRHDVVEP--------  176 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~~~--~~~v~~~~~D~~~~--------  176 (290)
                      .++++|+++||||+++||+++++.|+++|++|++.++....     ..+.+.+...  ........+|+.+.        
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            34789999999999999999999999999999999876321     1222221110  01122223344332        


Q ss_pred             ----cccCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCcc-ccCCCCCCC
Q 022900          177 ----LLLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEV-YGDPLQHPQ  242 (290)
Q Consensus       177 ----~~~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~v-yg~~~~~~~  242 (290)
                          .++++|++|||||...+....    +++++++++|+.|++++++++    ++.+ .+||++||.+. +|...    
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~----  158 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG----  158 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC----
Confidence                345799999999986554433    346779999999999999985    3444 49999999764 44321    


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          243 KETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       243 ~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                             ..+|+.+|.+...+.+.++.+   +|+.+..+-|+.+
T Consensus       159 -------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         159 -------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  195 (302)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence                   247999999998888888876   4777777777653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.69  E-value=5.2e-17  Score=141.25  Aligned_cols=162  Identities=12%  Similarity=-0.024  Sum_probs=118.5

Q ss_pred             CCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------c
Q 022900          113 KRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       113 ~~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~  178 (290)
                      ++++|+++||||+|  +||.+++++|+++|++|++.+|+.....+.........+...+.+|++++.            +
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            47899999999987  899999999999999999988863222222111223346778999998763            3


Q ss_pred             cCCCEEEEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      .++|++|||||......        ...++...+++|+.+++.+++++....   .+||++||........         
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~---------  155 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP---------  155 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT---------
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC---------
Confidence            57999999999643211        122356689999999999999876543   3899999976542111         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+.
T Consensus       156 -~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~  194 (256)
T d1ulua_         156 -KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVR  194 (256)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceee
Confidence             1247999999998888888876   47888888887653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.7e-16  Score=138.99  Aligned_cols=160  Identities=15%  Similarity=0.181  Sum_probs=119.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------cc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------~~  179 (290)
                      ++||+++||||+++||.+++++|+++|++|++++|+.+..++...+..  ....+..+.+|+.+..            .+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            789999999999999999999999999999999986544444333322  3456778888886542            34


Q ss_pred             CCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEcCCccc-cCCCCCCCCCCCCCCC
Q 022900          180 EVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVY-GDPLQHPQKETYWGNV  250 (290)
Q Consensus       180 ~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~----~~~~riV~vSS~~vy-g~~~~~~~~E~~~~~~  250 (290)
                      .+|+++||||........+    ++..++++|+.|+..+++++.    +.+.++|++||.+.+ +.+           ..
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p-----------~~  160 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP-----------MV  160 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT-----------TC
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCC-----------Cc
Confidence            6999999999765444332    345689999999999888764    334589999997653 221           12


Q ss_pred             ChhhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeeee
Q 022900          251 NPIGTYFFSFSLIFLVFISQF-----RPSRKACRFFILL  284 (290)
Q Consensus       251 ~py~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~lr  284 (290)
                      .+|+.+|.+.+.+.+.++.++     ++.+..+.|+.+.
T Consensus       161 ~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~  199 (269)
T d1xu9a_         161 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID  199 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC
Confidence            589999999988888887653     4667778887654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=8.7e-16  Score=132.95  Aligned_cols=165  Identities=10%  Similarity=-0.082  Sum_probs=114.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc--------------
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--------------  178 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--------------  178 (290)
                      +.|+|+||||+++||.+++++|+++|+  .|++.+|+.++..+. .+ ....++.++.+|++++..              
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l-~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KS-IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HT-CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH-HH-hhCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            458999999999999999999999996  688888865444332 22 234679999999987631              


Q ss_pred             cCCCEEEEcccCCCCCC--CCC---ChHHHHHHHHHHHHHHHHHHHH----c------------CCeEEEEcCCccccCC
Q 022900          179 LEVDQIYHLACPASPVH--YKF---NPVKTIKTNVVGTLNMLGLAKR----V------------GARFLLTSTSEVYGDP  237 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~--~~~---~~~~~~~~Nv~gt~~ll~a~~~----~------------~~riV~vSS~~vyg~~  237 (290)
                      .++|++|||||...+..  .+.   ++++++++|+.|++++++++..    .            ..+++.+|+...+-..
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            24999999999754322  222   3567899999999999888532    1            1257777775443211


Q ss_pred             CCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          238 LQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       238 ~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ..   ......+...|+.+|.+...+.+.++.+   .|+.+..+-|+.++
T Consensus       160 ~~---~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~  206 (250)
T d1yo6a1         160 NT---SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ  206 (250)
T ss_dssp             CC---STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred             Cc---ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence            11   1111122346999999988888888865   47788888777654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.4e-16  Score=139.41  Aligned_cols=158  Identities=20%  Similarity=0.126  Sum_probs=115.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEe---CCCCCch---hhhhccc-CCCCeEEEEccccccc----------c
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD---NFFTGRK---ENVMHHF-GNPNFELIRHDVVEPL----------L  178 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~---r~~~~~~---~~~~~~~-~~~~v~~~~~D~~~~~----------~  178 (290)
                      .|.|+||||+++||.++++.|+++|++|+.++   |+.....   +....+. ...++..+.+|++++.          .
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            35789999999999999999999999866554   3221111   1111211 3458999999998773          2


Q ss_pred             cCCCEEEEcccCCCCCCCC----CChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEcCCccc-cCCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVY-GDPLQHPQKETYWG  248 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~-~riV~vSS~~vy-g~~~~~~~~E~~~~  248 (290)
                      +.+|++|||||........    +++++++++|+.|++++++++    ++.+ .+||++||.+.. +.+           
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~-----------  150 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP-----------  150 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT-----------
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC-----------
Confidence            4699999999976544432    345778999999999999885    3444 499999997643 221           


Q ss_pred             CCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          249 NVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       249 ~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ...+|+.+|.+.+.+.+.++.+   +|+.+..+.|+.++
T Consensus       151 ~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~  189 (285)
T d1jtva_         151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH  189 (285)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence            1247999999998888888876   48888889888764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=3.8e-16  Score=135.97  Aligned_cols=161  Identities=11%  Similarity=-0.067  Sum_probs=118.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH---CCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEccccccc---------
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL---------  177 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~---------  177 (290)
                      .+++|+++||||+++||.+++++|++   +|++|++++|+.+..++...++   ..+.++..+.+|++++.         
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            47899999999999999999999986   7999999998654433333322   23457899999998762         


Q ss_pred             -------ccCCCEEEEcccCCCCCC----CC---CChHHHHHHHHHHHHHHHHHHHHc----C---CeEEEEcCCccccC
Q 022900          178 -------LLEVDQIYHLACPASPVH----YK---FNPVKTIKTNVVGTLNMLGLAKRV----G---ARFLLTSTSEVYGD  236 (290)
Q Consensus       178 -------~~~vD~vih~Ag~~~~~~----~~---~~~~~~~~~Nv~gt~~ll~a~~~~----~---~riV~vSS~~vyg~  236 (290)
                             ...+|++|||||...+..    .+   +++++++++|+.|++++++++.+.    +   .+||++||.+.+..
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                   124789999999753322    12   235678999999999999998643    2   27999999765421


Q ss_pred             CCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH-hCCCeeEEEeeee
Q 022900          237 PLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ-FRPSRKACRFFIL  283 (290)
Q Consensus       237 ~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~-~gl~~~ilR~~~l  283 (290)
                      ..          ...+|+.+|.+.+.+.+.++.+ .|+.+..+-|+.+
T Consensus       163 ~~----------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i  200 (259)
T d1oaaa_         163 YK----------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPL  200 (259)
T ss_dssp             CT----------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSB
T ss_pred             Cc----------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCC
Confidence            11          1247999999998888888865 4767777766654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.65  E-value=3.4e-16  Score=135.88  Aligned_cols=157  Identities=11%  Similarity=0.055  Sum_probs=110.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccc-------ccccCCCEEEEcccC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-------PLLLEVDQIYHLACP  190 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~-------~~~~~vD~vih~Ag~  190 (290)
                      +++||||+++||.++++.|+++|++|++.+|+.+...+..........+++.+.+-.+       +.++++|++|||||.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            7899999999999999999999999999988654433321111112233332222111       134679999999996


Q ss_pred             CCCC-CC----CCChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHH
Q 022900          191 ASPV-HY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSF  260 (290)
Q Consensus       191 ~~~~-~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~  260 (290)
                      .... ..    .+++++++++|+.+++++++++.    +.+ .+||++||.+.+....          ...+|+.+|.+.
T Consensus        82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~----------~~~~Y~asKaal  151 (252)
T d1zmta1          82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------ELSTYTSARAGA  151 (252)
T ss_dssp             CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------TCHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc----------cccccccccccH
Confidence            5322 21    23467789999999999988853    333 4999999986553211          124799999999


Q ss_pred             HHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          261 SLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       261 e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      +.+.+.++.+   +|+.+..+-|+.+.
T Consensus       152 ~~lt~~lA~ela~~gIrVN~I~PG~i~  178 (252)
T d1zmta1         152 CTLANALSKELGEYNIPVFAIGPNYLH  178 (252)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBC
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCCCc
Confidence            8888888865   48999999998764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.63  E-value=2.2e-15  Score=130.70  Aligned_cols=159  Identities=18%  Similarity=0.170  Sum_probs=117.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCC---Cchhhhhccc-CCCCeEEEEcccccccc----------
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT---GRKENVMHHF-GNPNFELIRHDVVEPLL----------  178 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~---~~~~~~~~~~-~~~~v~~~~~D~~~~~~----------  178 (290)
                      ..+.+|+||||+|+||.+++++|+++|+ +|+++.|+..   ...+.+.++. ...++.++.+|++++..          
T Consensus         7 ~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence            3456999999999999999999999998 5787887532   2222222222 34579999999987631          


Q ss_pred             -cCCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCcc-ccCCCCCCCCCCCCCCCC
Q 022900          179 -LEVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (290)
Q Consensus       179 -~~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~v-yg~~~~~~~~E~~~~~~~  251 (290)
                       .++|.||||||........+    ++..++++|+.|+.++.+++...+. +||++||.+. +|....           .
T Consensus        87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~-----------~  155 (259)
T d2fr1a1          87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL-----------G  155 (259)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC-----------T
T ss_pred             cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc-----------H
Confidence             25899999999765444332    2455789999999999998877664 8999999764 443322           3


Q ss_pred             hhhhhHHHHHHHHHHHHHHhCCCeeEEEeeeee
Q 022900          252 PIGTYFFSFSLIFLVFISQFRPSRKACRFFILL  284 (290)
Q Consensus       252 py~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr  284 (290)
                      .|+..|...+.+++.+.. .|++++.+.++.++
T Consensus       156 ~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~  187 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWA  187 (259)
T ss_dssp             TTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC
T ss_pred             HHHHHHHhHHHHHHHHHh-CCCCEEECCCCccc
Confidence            588999888888777665 49999999887654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=2e-15  Score=127.10  Aligned_cols=159  Identities=12%  Similarity=0.075  Sum_probs=108.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCe--EEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDS--VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      ++++|+||||+||||+++++.|+++|++  |+.+.|+.    +.....  ..+++++.+|+.+..     +.++|+|||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~----~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA----QGKEKI--GGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCH----HHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCH----HHHHhc--cCCcEEEEeeeccccccccccccceeeEEE
Confidence            4679999999999999999999999975  55555532    222222  246778888987663     5679999999


Q ss_pred             ccCCCCCCC-------------CCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChh
Q 022900          188 ACPASPVHY-------------KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (290)
Q Consensus       188 Ag~~~~~~~-------------~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py  253 (290)
                      |+.......             ..+......+|+.|+.+++..+..... .+.+.|+...+.....     .    ...+
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----~----~~~~  146 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----L----NKLG  146 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----G----GGGG
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----c----cccc
Confidence            986432221             123445678999999999999887775 7888887665532111     0    0111


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCeeEEEeeeeecccC
Q 022900          254 GTYFFSFSLIFLVFISQFRPSRKACRFFILLYRNG  288 (290)
Q Consensus       254 ~~~k~~~e~~~~~~~~~~gl~~~ilR~~~lr~~~~  288 (290)
                      .......+.....+....+++++++||+++....+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~  181 (252)
T d2q46a1         147 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEG  181 (252)
T ss_dssp             GCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCT
T ss_pred             ccchhhhhhhhhhhhhcccccceeecceEEECCCc
Confidence            22222234455666777899999999999866544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.63  E-value=1.8e-15  Score=133.83  Aligned_cols=163  Identities=12%  Similarity=-0.009  Sum_probs=119.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc--CCCCeEEEEccccccc------------
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~------------  177 (290)
                      .+++||+++||||+|+||++++++|+++|++|++++|+.....+...++.  ...++..+.+|++++.            
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            56899999999999999999999999999999999987544444333332  2467889999998773            


Q ss_pred             ccCCCEEEEcccCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHH----Hc-CC-eEEEEcCCccccCCCCCCCCCCCC
Q 022900          178 LLEVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAK----RV-GA-RFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       178 ~~~vD~vih~Ag~~~~~~~~~----~~~~~~~~Nv~gt~~ll~a~~----~~-~~-riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      +.++|++|||||.........    ++..++.+|..+...+...+.    .. .. .++.++|.+......         
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~---------  171 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---------  171 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc---------
Confidence            356999999999764443322    345678889988888766542    22 23 677777765332111         


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                       ...+|+.+|.+.+.+++.++.++   |+.+..+-|+.+.
T Consensus       172 -~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~  210 (294)
T d1w6ua_         172 -FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIK  210 (294)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccc
Confidence             12469999999999998888664   7788888887763

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=3.8e-15  Score=127.88  Aligned_cols=150  Identities=17%  Similarity=0.047  Sum_probs=106.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------------c--ccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------L--LLE  180 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------------~--~~~  180 (290)
                      ++|+|+||||+|+||.++++.|+++|++|+++++.......         .......|..+.            .  ..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------ASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------EEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc---------ccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999875422111         111222222111            1  125


Q ss_pred             CCEEEEcccCCCCCC-CC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCCh
Q 022900          181 VDQIYHLACPASPVH-YK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (290)
Q Consensus       181 vD~vih~Ag~~~~~~-~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~p  252 (290)
                      +|++|||||...... ..    ++++.++++|+.++.++.+++.+..   .+||++||.+.+....          ...+
T Consensus        72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~----------~~~~  141 (236)
T d1dhra_          72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------GMIG  141 (236)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBHH
T ss_pred             ceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc----------CCcc
Confidence            899999999533222 11    2356689999999999999886543   3899999986542111          1247


Q ss_pred             hhhhHHHHHHHHHHHHHHh-----CCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQF-----RPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+.+.++.++     |+.+..+-|+.+
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v  177 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL  177 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccC
Confidence            9999999999999998654     577777877765

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=5.3e-15  Score=127.57  Aligned_cols=159  Identities=18%  Similarity=0.172  Sum_probs=118.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------------ccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------~~~  180 (290)
                      +++||+++||||+++||.+++++|+++|++|++++|+.+..++...++  .........|+.+..            ...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCCccccccccccccccccccccccccccc
Confidence            478999999999999999999999999999999999876655555444  346677777776542            235


Q ss_pred             CCEEEEcccCCCCCCC----------CCChHHHHHHHHHHHHHHHHHHHHc----------C-CeEEEEcCCccccCCCC
Q 022900          181 VDQIYHLACPASPVHY----------KFNPVKTIKTNVVGTLNMLGLAKRV----------G-ARFLLTSTSEVYGDPLQ  239 (290)
Q Consensus       181 vD~vih~Ag~~~~~~~----------~~~~~~~~~~Nv~gt~~ll~a~~~~----------~-~riV~vSS~~vyg~~~~  239 (290)
                      .|.++++++.......          .+++++++++|+.+++++++++.+.          + .+||++||.+.+.... 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-  158 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV-  158 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT-
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC-
Confidence            8999998875432221          1245678999999999999987542          2 2799999987542111 


Q ss_pred             CCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          240 HPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       240 ~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                               ...+|+.+|.+.+.+++.++.++   |+.+..+-|+.+
T Consensus       159 ---------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i  196 (248)
T d2o23a1         159 ---------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLF  196 (248)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCce
Confidence                     12479999999999999888764   677777777654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.61  E-value=9.1e-16  Score=131.61  Aligned_cols=148  Identities=16%  Similarity=0.093  Sum_probs=103.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc--------------cccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------------LLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~--------------~~~~vD  182 (290)
                      .+|+||||+|+||.+++++|+++|++|++++|+......         ....+.+|+.+.              ...++|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---------SNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc---------ccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            478999999999999999999999999999986432211         111222233211              235699


Q ss_pred             EEEEcccCCCCCC-CC----CChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhh
Q 022900          183 QIYHLACPASPVH-YK----FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (290)
Q Consensus       183 ~vih~Ag~~~~~~-~~----~~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~  254 (290)
                      +||||||...... ..    +.++.++++|+.++.++++++.+..   .+||++||.+.+....          ...+|+
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~~~Y~  143 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP----------SMIGYG  143 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBHHHH
T ss_pred             EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc----------cccchH
Confidence            9999999643221 22    2345679999999999999987643   3899999976543111          124899


Q ss_pred             hhHHHHHHHHHHHHHHh-----CCCeeEEEeeee
Q 022900          255 TYFFSFSLIFLVFISQF-----RPSRKACRFFIL  283 (290)
Q Consensus       255 ~~k~~~e~~~~~~~~~~-----gl~~~ilR~~~l  283 (290)
                      .+|.+.+.+.+.++.++     ++.+..+.|+.+
T Consensus       144 asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~  177 (235)
T d1ooea_         144 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL  177 (235)
T ss_dssp             HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred             HHHHHHHHHHHHHHHHhccCCCceEEEEEecCcC
Confidence            99999999999998765     334445555544

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.59  E-value=4.3e-15  Score=130.23  Aligned_cols=150  Identities=17%  Similarity=0.196  Sum_probs=106.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh-h--hcccCCCCeEEEEccccccc-----ccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-V--MHHFGNPNFELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~--~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      +++|+|||||||||++|+++|+++|++|++++|+....... .  .......+++++.+|+.+..     +.+++.++|+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            45799999999999999999999999999999875433211 1  11224567999999998764     4679999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLV  266 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~  266 (290)
                      ++....           ..|..++.+++++|++.+ .++++.||.++++.....        +..|. ..+...+..++.
T Consensus        83 ~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~--------~~~~~-~~~~~~~~~~~~  142 (312)
T d1qyda_          83 LAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH--------ALQPG-SITFIDKRKVRR  142 (312)
T ss_dssp             CCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCC--------CCSST-THHHHHHHHHHH
T ss_pred             hhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCccc--------ccchh-hhhhHHHHHHHH
Confidence            875322           145566778888888876 488888886655432211        11222 333344555667


Q ss_pred             HHHHhCCCeeEEEeeeeec
Q 022900          267 FISQFRPSRKACRFFILLY  285 (290)
Q Consensus       267 ~~~~~gl~~~ilR~~~lr~  285 (290)
                      +....+++++++|++++..
T Consensus       143 ~~~~~~~~~~i~r~~~~~g  161 (312)
T d1qyda_         143 AIEAASIPYTYVSSNMFAG  161 (312)
T ss_dssp             HHHHTTCCBCEEECCEEHH
T ss_pred             hhcccccceEEeccceeec
Confidence            7788899999999988754

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.53  E-value=2.2e-14  Score=124.58  Aligned_cols=146  Identities=13%  Similarity=0.160  Sum_probs=102.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh--h--hcccCCCCeEEEEccccccc-----ccCCCEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--V--MHHFGNPNFELIRHDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~--~--~~~~~~~~v~~~~~D~~~~~-----~~~vD~vi  185 (290)
                      ++|+|+|||||||||++++++|+++|++|++++|+.......  .  ........++++.+|+.+..     +.++|.+|
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            357899999999999999999999999999999975443221  1  11123457889999997764     45799999


Q ss_pred             EcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q 022900          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIF  264 (290)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~  264 (290)
                      |+++.               .+..++.+++++++..+. ++++.||...+..       +.   +..++...........
T Consensus        82 ~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~---~~~~~~~~~~~~~~~~  136 (307)
T d1qyca_          82 STVGS---------------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NV---HAVEPAKSVFEVKAKV  136 (307)
T ss_dssp             ECCCG---------------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SC---CCCTTHHHHHHHHHHH
T ss_pred             ecccc---------------cccchhhHHHHHHHHhccccceeeeccccccc-------cc---cccccccccccccccc
Confidence            99874               244456678888888775 7777776433321       11   1122333344444556


Q ss_pred             HHHHHHhCCCeeEEEeeeeec
Q 022900          265 LVFISQFRPSRKACRFFILLY  285 (290)
Q Consensus       265 ~~~~~~~gl~~~ilR~~~lr~  285 (290)
                      +.+..+.+++++++|++++..
T Consensus       137 ~~~~~~~~~~~~i~r~~~v~g  157 (307)
T d1qyca_         137 RRAIEAEGIPYTYVSSNCFAG  157 (307)
T ss_dssp             HHHHHHHTCCBEEEECCEEHH
T ss_pred             cchhhccCCCceecccceecC
Confidence            667777899999999998754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1.6e-13  Score=118.44  Aligned_cols=159  Identities=16%  Similarity=0.018  Sum_probs=114.4

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+|+||||+|  +||.++++.|+++|++|++.+|+.. ..+.+.+.. ..........|+.+..            .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            6899999999998  8999999999999999999998743 333333322 2345566676775542            3


Q ss_pred             cCCCEEEEcccCCCCCCCCC---------ChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEcCCcc-ccCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYKF---------NPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEV-YGDPLQHPQKET  245 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~~---------~~~~~~~~Nv~gt~~ll~a~~~~~---~riV~vSS~~v-yg~~~~~~~~E~  245 (290)
                      ..+|++||||+.........         ++...+++|+.+...+++++....   ..||++||.+. ++.+        
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~--------  153 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP--------  153 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC--------
Confidence            46899999999754433221         134467888888888888876543   36888888653 2221        


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ...+|+.+|.+.+.+++.++.++   |+.+..+.|+.+.
T Consensus       154 ---~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~  192 (258)
T d1qsga_         154 ---NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR  192 (258)
T ss_dssp             ---TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCC
T ss_pred             ---CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccc
Confidence               12479999999999998888775   5778888888764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.46  E-value=4.6e-13  Score=116.60  Aligned_cols=160  Identities=13%  Similarity=-0.016  Sum_probs=103.8

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc-CCCCeEEEEccccccc------------c
Q 022900          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (290)
Q Consensus       114 ~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~------------~  178 (290)
                      +++|+++||||+|  +||.++++.|+++|++|++++|+.. ..+.+.++. ......+...|++++.            +
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            6899999999876  8999999999999999999999743 223333222 2345667788887662            3


Q ss_pred             cCCCEEEEcccCCCCCCCC-----CChHHHHHH---HHHHHHHHHHHHHHcC---CeEEEEcCCccccCCCCCCCCCCCC
Q 022900          179 LEVDQIYHLACPASPVHYK-----FNPVKTIKT---NVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYW  247 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~-----~~~~~~~~~---Nv~gt~~ll~a~~~~~---~riV~vSS~~vyg~~~~~~~~E~~~  247 (290)
                      ..+|++|||+|........     ..+......   +......+.....+..   ..|+.+|+.+..+..          
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~----------  151 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------  151 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----------
Confidence            5799999999975433322     122222222   2223333444333332   246666666554321          


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeee
Q 022900          248 GNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILL  284 (290)
Q Consensus       248 ~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr  284 (290)
                      ....+|+.+|.+.+.+++.++.+   +|+.+..+.|+.+.
T Consensus       152 ~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~  191 (274)
T d2pd4a1         152 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIR  191 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCccc
Confidence            12247899998888887777765   47788888887654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.45  E-value=7.6e-13  Score=118.82  Aligned_cols=143  Identities=16%  Similarity=0.112  Sum_probs=101.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc------cccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~vD~vih~A  188 (290)
                      +.|+|+|||||||||++++++|+++|++|+++.|+......  .......+++++.+|+.+.      .+.++|.++++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence            46899999999999999999999999999999997544322  2223456799999999875      245688888765


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVF  267 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~  267 (290)
                      ....            ..|+..+.+++++|++.+. ++++.||.........        ....++...|..    .+.+
T Consensus        80 ~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~--------~~~~~~~~~k~~----~~~~  135 (350)
T d1xgka_          80 TSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP--------WPAVPMWAPKFT----VENY  135 (350)
T ss_dssp             CSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS--------CCCCTTTHHHHH----HHHH
T ss_pred             cccc------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc--------ccchhhhhhHHH----HHHH
Confidence            4211            1467778899999999985 8888888654332111        122345445543    4455


Q ss_pred             HHHhCCCeeEEEeeee
Q 022900          268 ISQFRPSRKACRFFIL  283 (290)
Q Consensus       268 ~~~~gl~~~ilR~~~l  283 (290)
                      ....+.+++++|+...
T Consensus       136 ~~~~~~~~~~vr~~~~  151 (350)
T d1xgka_         136 VRQLGLPSTFVYAGIY  151 (350)
T ss_dssp             HHTSSSCEEEEEECEE
T ss_pred             HHhhccCceeeeecee
Confidence            6667899999998764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.45  E-value=8.4e-13  Score=115.22  Aligned_cols=157  Identities=11%  Similarity=-0.009  Sum_probs=105.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEcc-----------------cccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHD-----------------VVEP  176 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D-----------------~~~~  176 (290)
                      ..++||||+++||.++++.|+++|++|++.+++.....+.+...+   .......+..|                 ++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            379999999999999999999999999998875433332222211   23344444444                 4433


Q ss_pred             ------------cccCCCEEEEcccCCCCCCCCC----C--------------hHHHHHHHHHHHHHHHHHHHH------
Q 022900          177 ------------LLLEVDQIYHLACPASPVHYKF----N--------------PVKTIKTNVVGTLNMLGLAKR------  220 (290)
Q Consensus       177 ------------~~~~vD~vih~Ag~~~~~~~~~----~--------------~~~~~~~Nv~gt~~ll~a~~~------  220 (290)
                                  .++++|++|||||...+....+    +              ...++++|+.++..+.+++.+      
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence                        2357999999999765433221    1              123688999999999887543      


Q ss_pred             ---cC--CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeee
Q 022900          221 ---VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFIL  283 (290)
Q Consensus       221 ---~~--~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~l  283 (290)
                         .+  .+|++++|........          ...+|+.+|.+.+.+.+.++.++   |+.+..+-|+..
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~----------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLL----------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HHhcCCCCcccccccccccCCcc----------ceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence               12  2677777765432111          12479999999988888888754   777777777643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.40  E-value=9.8e-13  Score=113.92  Aligned_cols=160  Identities=10%  Similarity=-0.018  Sum_probs=109.5

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc--------------
Q 022900          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------------  177 (290)
Q Consensus       114 ~~~k~VlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--------------  177 (290)
                      +++|+++||||+  .+||.+++++|+++|++|++.+|+..+..+.+.+.. ..+...+.+|+.++.              
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhccc
Confidence            689999999964  579999999999999999999986544434343332 346778889998662              


Q ss_pred             -ccCCCEEEEcccCCCCCCC------CC---ChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcCCccccCCCCCCCCCC
Q 022900          178 -LLEVDQIYHLACPASPVHY------KF---NPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKET  245 (290)
Q Consensus       178 -~~~vD~vih~Ag~~~~~~~------~~---~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vSS~~vyg~~~~~~~~E~  245 (290)
                       ...+|++|||||.......      +.   ++...+++|+.......+.......  .+++++|........       
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p-------  155 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP-------  155 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT-------
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCc-------
Confidence             2358999999996432111      11   2334577777777777777655432  444444433322111       


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHHh---CCCeeEEEeeeee
Q 022900          246 YWGNVNPIGTYFFSFSLIFLVFISQF---RPSRKACRFFILL  284 (290)
Q Consensus       246 ~~~~~~py~~~k~~~e~~~~~~~~~~---gl~~~ilR~~~lr  284 (290)
                         ...+|+.+|.+.+.+++.++.++   |+.+..+.|+.++
T Consensus       156 ---~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~  194 (268)
T d2h7ma1         156 ---AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIR  194 (268)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             ---ccchhhccccchhhccccchhhhhccCCcceEEecCCCC
Confidence               12479999999988888888754   7888888888764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.38  E-value=2.6e-12  Score=112.81  Aligned_cols=164  Identities=10%  Similarity=-0.062  Sum_probs=103.3

Q ss_pred             CCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCch---------hhhhcccC---C---CCeEEEEcccc
Q 022900          112 LKRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRK---------ENVMHHFG---N---PNFELIRHDVV  174 (290)
Q Consensus       112 ~~~~~k~VlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~---~---~~v~~~~~D~~  174 (290)
                      ..+++|+++||||+|  +||.++++.|+++|++|++.+|+.....         ........   .   .++..++.++.
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            457899999999887  9999999999999999999886421000         00000000   0   11222222111


Q ss_pred             ------------------------------cccccCCCEEEEcccCCCC--CC----CCCChHHHHHHHHHHHHHHHHHH
Q 022900          175 ------------------------------EPLLLEVDQIYHLACPASP--VH----YKFNPVKTIKTNVVGTLNMLGLA  218 (290)
Q Consensus       175 ------------------------------~~~~~~vD~vih~Ag~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~a~  218 (290)
                                                    .+.++++|++|||||....  ..    ..+++..++++|+.+++++++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                                          1123579999999996421  11    12346778999999999999998


Q ss_pred             HHcC---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH----HHhCCCeeEEEeeeee
Q 022900          219 KRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFI----SQFRPSRKACRFFILL  284 (290)
Q Consensus       219 ~~~~---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~----~~~gl~~~ilR~~~lr  284 (290)
                      ....   ..++.+++.+......         .....|...|.....+.+.+.    .++|+.+..+.|+.+.
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~  227 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIP---------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCT---------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHhhcCCcceeeeehhhccccc---------ccccceecccccccccccccchhccccceEEeccccccccc
Confidence            7654   2566666654332111         122468888877765555444    3468999999988764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.37  E-value=3.4e-12  Score=114.35  Aligned_cols=160  Identities=8%  Similarity=-0.059  Sum_probs=107.0

Q ss_pred             CCEEEEEc--CCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhh--------hccc-----CCCCeEEEEccc-------
Q 022900          116 GLRIVVTG--GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--------MHHF-----GNPNFELIRHDV-------  173 (290)
Q Consensus       116 ~k~VlVTG--asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~--------~~~~-----~~~~v~~~~~D~-------  173 (290)
                      +|.++|||  ++++||.++++.|+++|++|++.++.........        ....     .........+|+       
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            68999999  5579999999999999999999876432111000        0000     011223333333       


Q ss_pred             -------------ccc------------cccCCCEEEEcccCCCCCC------CCCChHHHHHHHHHHHHHHHHHHHHcC
Q 022900          174 -------------VEP------------LLLEVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRVG  222 (290)
Q Consensus       174 -------------~~~------------~~~~vD~vih~Ag~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~~~  222 (290)
                                   +++            .++++|++|||||...+..      ..+++..++++|+.++..+++++.+..
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                         121            2357999999999653321      123567789999999999999987653


Q ss_pred             ---CeEEEEcCCccccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHH----HhCCCeeEEEeeeee
Q 022900          223 ---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFIS----QFRPSRKACRFFILL  284 (290)
Q Consensus       223 ---~riV~vSS~~vyg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~----~~gl~~~ilR~~~lr  284 (290)
                         .+||.+||.+.....         ++....|+.+|.+.+.+++.++.    ++|+.+..+-|+.++
T Consensus       162 ~~~GsIv~iss~~~~~~~---------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVV---------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEECGGGTSCC---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             ccccccccceeehhcccc---------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence               389999887653211         01124589999998887777774    358999999998765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.37  E-value=8.4e-12  Score=107.60  Aligned_cols=158  Identities=15%  Similarity=0.048  Sum_probs=105.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccc----------------cc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEP----------------LL  178 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~----------------~~  178 (290)
                      +++||||+++||.+++++|+++|++|++++|+.+...+.+.+.+   ...+......|..+.                .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999987544333322211   344566666555322                24


Q ss_pred             cCCCEEEEcccCCCCCCCCC---------------ChHHHHHHHHHHHHHHHHHHHHcC----------CeEEEEcCCcc
Q 022900          179 LEVDQIYHLACPASPVHYKF---------------NPVKTIKTNVVGTLNMLGLAKRVG----------ARFLLTSTSEV  233 (290)
Q Consensus       179 ~~vD~vih~Ag~~~~~~~~~---------------~~~~~~~~Nv~gt~~ll~a~~~~~----------~riV~vSS~~v  233 (290)
                      +++|++|||||...+.....               .+..++..|+.+............          ..++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            57999999999764433211               123356677777666666543321          14666666544


Q ss_pred             ccCCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeeeec
Q 022900          234 YGDPLQHPQKETYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFILLY  285 (290)
Q Consensus       234 yg~~~~~~~~E~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~lr~  285 (290)
                      .....          ...+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.++.
T Consensus       163 ~~~~~----------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t  207 (266)
T d1mxha_         163 DLPLP----------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL  207 (266)
T ss_dssp             GSCCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred             cccCc----------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEec
Confidence            32111          2257999999988888888765   478888888887654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.35  E-value=5.5e-13  Score=113.54  Aligned_cols=146  Identities=18%  Similarity=0.127  Sum_probs=104.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----------ccCCCEE
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------~~~vD~v  184 (290)
                      +|+++||||+++||+++++.|+++|++|++++|+.+.           .+.....+|+.+..           ....|.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            4799999999999999999999999999999986422           23455667775542           1245666


Q ss_pred             EEcccCCCCCC--------CCCChHHHHHHHHHHHHHHHHHHHHc----------C-CeEEEEcCCccc-cCCCCCCCCC
Q 022900          185 YHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----------G-ARFLLTSTSEVY-GDPLQHPQKE  244 (290)
Q Consensus       185 ih~Ag~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~-~riV~vSS~~vy-g~~~~~~~~E  244 (290)
                      +++++......        ....+++++++|+.+..++++.+...          + .+||++||...+ +.+       
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-------  142 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  142 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence            66666432211        11234668999999999988876421          2 289999998654 321       


Q ss_pred             CCCCCCChhhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          245 TYWGNVNPIGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       245 ~~~~~~~py~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                          ...+|+.+|.+.+.+.+.++.+   +|+.+..+-|+.+
T Consensus       143 ----~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i  180 (241)
T d1uaya_         143 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLF  180 (241)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSC
T ss_pred             ----CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcc
Confidence                1247999999999989888875   4778888877765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.28  E-value=1.5e-13  Score=114.13  Aligned_cols=103  Identities=13%  Similarity=0.107  Sum_probs=70.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEE
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih  186 (290)
                      ..+++|+|+||||+|+||.++++.|+++|++|++++|+.++..+....+....++.+..+|+.+.     .+.++|+|||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            45789999999999999999999999999999999997544444333332333455566677654     4678999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHH
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNM  214 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~l  214 (290)
                      |||........+++...+++|+.+..+.
T Consensus        99 ~Ag~g~~~~~~e~~~~~~~~nv~~~~~~  126 (191)
T d1luaa1          99 AGAIGLELLPQAAWQNESSIEIVADYNA  126 (191)
T ss_dssp             CCCTTCCCBCHHHHHTCTTCCEEEECCC
T ss_pred             cCccccccCCHHHHHhhhcceeehhHhh
Confidence            9996432222233333444454444433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.19  E-value=1.7e-11  Score=105.25  Aligned_cols=162  Identities=11%  Similarity=-0.051  Sum_probs=99.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~  195 (290)
                      ||.|+||||+++||.+++++|+++|++|++++|+.......+...   ........|+.......+|+++||||...   
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~id~lv~~Ag~~~---   74 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTA---EGRKQAIADVLAKCSKGMDGLVLCAGLGP---   74 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSH---HHHHHHHHHHHTTCTTCCSEEEECCCCCT---
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCH---HHHHHHHHHHHHHhCCCCcEEEEcCCCCC---
Confidence            689999999999999999999999999999998532211111000   00000111222333456999999998633   


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcCCccc-cCCCCCCCC----------------CC-CCCCCCh
Q 022900          196 YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVY-GDPLQHPQK----------------ET-YWGNVNP  252 (290)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~-riV~vSS~~vy-g~~~~~~~~----------------E~-~~~~~~p  252 (290)
                      ..........+|..+...+.+....    ... ....+++.... -.....+..                .. ......+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~  154 (257)
T d1fjha_          75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA  154 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHH
Confidence            3445677788999998888776432    222 45555543221 111111100                00 0001125


Q ss_pred             hhhhHHHHHHHHHHHHHH---hCCCeeEEEeeee
Q 022900          253 IGTYFFSFSLIFLVFISQ---FRPSRKACRFFIL  283 (290)
Q Consensus       253 y~~~k~~~e~~~~~~~~~---~gl~~~ilR~~~l  283 (290)
                      |+.+|.+.+.+.+.++.+   +|+++..+-|+.+
T Consensus       155 Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i  188 (257)
T d1fjha_         155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGAT  188 (257)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-
T ss_pred             HHHHhhhhhccccccccccccccccccccccCCc
Confidence            999999988888888754   4789999988766

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.14  E-value=6.5e-06  Score=64.05  Aligned_cols=108  Identities=12%  Similarity=0.018  Sum_probs=74.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCC---CCe-EEEEcccccccccCCCEEEEcccCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGN---PNF-ELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~v-~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +|.|+||+|.+|.+++..|..+|.  +++++|.+.  .+....++...   ... ..+..+-..+.+.+.|+||..||..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~--~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~   79 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP   79 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc--cchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence            799999999999999999998875  788888642  22222222211   111 1222333344578899999999953


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                        .....+..+.++.|+.-...+++.+++.+.  .++.+|
T Consensus        80 --~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          80 --RKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             --CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             --CCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence              333456677899999999999999998874  444444

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.12  E-value=7.3e-06  Score=63.91  Aligned_cols=111  Identities=14%  Similarity=0.141  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhcc----cCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHH----FGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      +.++|.|.|+ |.+|..++..|+.+|  .+++++|++....+....++    ...........|.  +++.++|+||.+|
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--~~~~~adivvita   80 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--SDCKDADLVVITA   80 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--HHhccccEEEEec
Confidence            4568999995 999999999999987  58999997543222111111    1123344455554  4567899999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                      |..  .....+..+.+..|+.-...+.+.+++.+. -++.+-|
T Consensus        81 g~~--~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          81 GAP--QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             CC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccc--cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            853  223345566788999999999999998874 4444443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=1.4e-05  Score=62.08  Aligned_cols=110  Identities=14%  Similarity=0.064  Sum_probs=73.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH-C--CCeEEEEeCCCCCchhhhhccc---CCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIA-R--GDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~-~--G~~V~~~~r~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.|+|++|.+|.+++..|.. .  +.++.++|... .......++.   .......+..+-..+.+.+.|+||-+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence            5899999999999999988764 3  46888888642 2222222221   11222233222223457789999999995


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      .  .....+-.+.++.|..-...+.+.+.+.+.  .++.+|
T Consensus        80 ~--~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          80 R--RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             C--CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             c--CCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            3  334456677889999999999999988764  455554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.10  E-value=3.1e-05  Score=60.14  Aligned_cols=110  Identities=13%  Similarity=0.169  Sum_probs=74.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCc-----hhhhhccc--CCCCeEEE-EcccccccccCCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGR-----KENVMHHF--GNPNFELI-RHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~-----~~~~~~~~--~~~~v~~~-~~D~~~~~~~~vD~vih  186 (290)
                      |+|.|+||+|.+|..++..|+.+|  .++.++|+.....     ...+.+..  .....+.. ..+-..+.+.+.|+||-
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            579999999999999999999998  4889988752111     11112211  12223322 22223457788999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT  228 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~v  228 (290)
                      +||.  +.....+-.+.++.|..-...+++..++.+. .++.+
T Consensus        81 tAG~--~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          81 TSGV--PRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             CCSC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             eccc--ccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9995  3334456778899999999999999888764 44433

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.10  E-value=1.3e-05  Score=62.54  Aligned_cols=111  Identities=20%  Similarity=0.269  Sum_probs=76.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcc-----cCCCCeEEEEcccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHH-----FGNPNFELIRHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~-----~~~~~v~~~~~D~~~~~~~~vD~vih  186 (290)
                      ..+++|.|.|| |.+|.+++..|+.+|.  ++.++|++....+....++     +......+...|.  +++.+.|+||.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--~~l~daDvvvi   80 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY--DDCRDADLVVI   80 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG--GGTTTCSEEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH--HHhccceeEEE
Confidence            34578999996 9999999999999875  7999987533222111111     1223444555553  56788999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      +||..  .....+..+.+..|..-...+.+.+++.+.  .++.+|
T Consensus        81 tag~~--~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          81 CAGAN--QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CCSCC--CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ecccc--cccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99953  333445567788999999999999888774  455543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.96  E-value=6.5e-05  Score=57.90  Aligned_cols=108  Identities=12%  Similarity=0.092  Sum_probs=74.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      |+|.|+|| |.+|..++..|+.+|  .++.++|++..........+.     ......+...+. .+.+.+.|++|-+||
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            57899995 999999999999987  489999976543332222221     122344432222 356789999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT  228 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~v  228 (290)
                      ..  .....+-.+.++.|..-...+.+.+++.+. -++.+
T Consensus        79 ~~--~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          79 LP--RKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             CC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             cC--CCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            53  333455677889999999999999988774 34444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.96  E-value=4.3e-05  Score=61.19  Aligned_cols=110  Identities=15%  Similarity=0.104  Sum_probs=74.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC---CC----eEEEEeCCCCCchhhhhcc----c--CCC-CeEEEEcccccccccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR---GD----SVIVVDNFFTGRKENVMHH----F--GNP-NFELIRHDVVEPLLLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~---G~----~V~~~~r~~~~~~~~~~~~----~--~~~-~v~~~~~D~~~~~~~~v  181 (290)
                      ..+|.||||+|.||++++-.|++.   |.    .+.+++..  ...+.+.+.    .  ..+ .-..+..+-..+.+.+.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~--~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~a  101 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSE--RSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV  101 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCc--cccchhcchhhhhcccccccccCccccccchhhccCC
Confidence            348999999999999999999875   32    34444432  222222111    1  111 22334445556678899


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC--eEEEEc
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA--RFLLTS  229 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~--riV~vS  229 (290)
                      |+||-.||.  +.....+..+.++.|..-...+.+++.+. ..  +++.+|
T Consensus       102 DvVvi~ag~--~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         102 DWALLIGAK--PRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             SEEEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ceEEEeecc--CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            999999985  45556778889999999999999999885 32  555554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.90  E-value=6.2e-05  Score=58.93  Aligned_cols=117  Identities=13%  Similarity=0.076  Sum_probs=77.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEE
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih  186 (290)
                      ..+.++|.|.|+ |.+|..++..|..++. +++++|.+....+.....+.     ..........+..++.+.+.|+||-
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvi   82 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV   82 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEE
Confidence            356679999996 9999999988888774 88888876433322222211     1223333333334556788999999


Q ss_pred             cccCCCCCC---CCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          187 LACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       187 ~Ag~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                      +||....+.   ...+-.+.+..|..-...+++.+++.+. -++.+-|
T Consensus        83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999643222   1124566788999999999999988875 4444433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.89  E-value=8.1e-05  Score=57.47  Aligned_cols=108  Identities=17%  Similarity=0.032  Sum_probs=75.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCC--chh---hhhccc-CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTG--RKE---NVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~--~~~---~~~~~~-~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      +|.|+||+|.+|.+++..|..+|.  ++.++|.....  .+-   .+.+.. -.....+...|  .+++.+.|+||-.||
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~--~~~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC--HHHhhhcCEEEEecc
Confidence            799999999999999999999975  78888753111  111   111111 13344555554  355778999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      ..  .....+-.+.++.|..-...+.+.+++.+.  .++.+|
T Consensus        80 ~~--~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          80 IP--RQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             CC--CCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             cc--cccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            53  333456778899999999999999998874  444443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.86  E-value=0.00013  Score=56.26  Aligned_cols=102  Identities=16%  Similarity=0.107  Sum_probs=68.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccC----CCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++|.|.|+ |.+|..++..|+.+|.  ++.++|++....+....++..    ........+  ..+++.+.|+||-.||.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~~adivvitag~   78 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG--DYSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CGGGGTTCSEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC--cHHHhCCCceEEEeccc
Confidence            36888896 9999999999999875  899999876544333322221    123333333  34567889999999995


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA  223 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~  223 (290)
                      .  .....+..+.+..|..-...+.+.+++.+.
T Consensus        79 ~--~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p  109 (142)
T d1y6ja1          79 N--RKPGETRLDLAKKNVMIAKEVTQNIMKYYN  109 (142)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             c--cCcCcchhHHhhHHHHHHHHHHHHhhccCC
Confidence            3  333456778899999999999999988764

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.82  E-value=8.7e-05  Score=58.44  Aligned_cols=111  Identities=14%  Similarity=0.049  Sum_probs=76.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih  186 (290)
                      .+.++|.|.|+ |.+|..++..|+.+|.  ++.++|++.+..+....++.     ..........|  .+.+.+.|+||.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d--~~~~~~adiVVi   94 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD--YSVTANSKIVVV   94 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS--GGGGTTCSEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc--hhhcccccEEEE
Confidence            44568999995 9999999999999986  78999875332222221111     12222223333  456788999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      .||..  .....+..+.++.|+.-...++..+++.+.  -++.+|
T Consensus        95 tAg~~--~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          95 TAGVR--QQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             CCSCC--CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ecCCc--cccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99963  333455677888999999999999988774  444444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.80  E-value=4.6e-05  Score=59.63  Aligned_cols=110  Identities=15%  Similarity=0.109  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC----e---EEEEeCCCCCchhhhhcc----c--CCCCe-EEEEcccccccccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD----S---VIVVDNFFTGRKENVMHH----F--GNPNF-ELIRHDVVEPLLLEV  181 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~----~---V~~~~r~~~~~~~~~~~~----~--~~~~v-~~~~~D~~~~~~~~v  181 (290)
                      .++|.|+||+|++|++++..|+..+.    .   ..+++-  ....+.....    .  ..... .....+-..+.+.+.
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   81 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI--PQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA   81 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcc--ccchhhHcCchhhhhccccccccccccCCchhhhcccc
Confidence            35899999999999999999998753    1   122221  1222222111    1  11222 233334445678899


Q ss_pred             CEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC--eEEEEc
Q 022900          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA--RFLLTS  229 (290)
Q Consensus       182 D~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~--riV~vS  229 (290)
                      |+||-+||..  .....+..+.++.|+.-...+.+.+.+. ..  .++.+|
T Consensus        82 dvViitaG~~--~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          82 DYALLVGAAP--RKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             SEEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cEEEeecCcC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999999963  3445567788999999999999998874 33  444444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.79  E-value=0.00013  Score=56.09  Aligned_cols=109  Identities=14%  Similarity=0.108  Sum_probs=74.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCCCCchhhhhccc----CCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.|.|+ |.+|..++..|+.++  .++.++|++....+....++.    -.........|  .+++.+.|+||-+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~--~~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc--HHHhcCCCEEEEeccc
Confidence            57899996 999999999998886  488999875332221111111    12344455544  3468899999999995


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                      .  .....+..+.+..|..-...+.+.+++.+. -++++-|
T Consensus        78 ~--~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          78 P--QKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             C--CCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             c--cCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            3  333456677888999999999999988774 3444433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.75  E-value=6.9e-06  Score=65.26  Aligned_cols=36  Identities=28%  Similarity=0.446  Sum_probs=32.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  152 (290)
                      |+|.|+||+|.+|.+|++.|++.|++|++.+|+.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            578999999999999999999999999999986543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.72  E-value=0.0002  Score=55.25  Aligned_cols=107  Identities=18%  Similarity=0.155  Sum_probs=73.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhh---hccc-CCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHHF-GNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~---~~~~-~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +|.|.|+ |.+|.+++..|+.+|.  ++.++|++....+...   .+.. ......+...+-. +.+.+.|+||-.||..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~-~~~~daDvVVitaG~~   80 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGPR   80 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH-HHhhCCcEEEEecccc
Confidence            7899996 9999999999999875  7999987532222211   1111 1122333333333 3577899999999953


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT  228 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~v  228 (290)
                        .....+..+.+..|..-...+.+.+++.+. -++.+
T Consensus        81 --~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          81 --QKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             --CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             --cCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence              334456678899999999999999988874 34443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.70  E-value=3.7e-05  Score=58.31  Aligned_cols=67  Identities=19%  Similarity=0.268  Sum_probs=50.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc------cCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL------LEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~------~~vD~vih~A  188 (290)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++++    ++.+..........++.+|.+++.+      .+.|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d----~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID----KDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCC----hhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            68999996 999999999999999999999864    3333322222357788999988753      4688888643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=7.9e-05  Score=58.64  Aligned_cols=111  Identities=12%  Similarity=0.052  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih  186 (290)
                      .+..+|.|.|+ |.+|.+++..|..+|.  +++++|++....+....++.     ..........|  .+.+.+.|+||.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d--~~~~~~adivvi   93 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD--YNVSANSKLVII   93 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS--GGGGTTEEEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc--hhhhccccEEEE
Confidence            44558999995 9999999999999875  78999875322222221221     11223333334  345678999999


Q ss_pred             cccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      .||...  ....+..+.++.|+.-...+.+.+++.+.  .++.+|
T Consensus        94 tag~~~--~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          94 TAGARM--VSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             CCSCCC--CTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             eccccc--CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            999533  22344455678899989999888887764  444444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=9.5e-05  Score=57.33  Aligned_cols=99  Identities=15%  Similarity=0.072  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-C---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG-D---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G-~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ||+|.|.||||++|+.+++.|+++. +   +++.+..+....+.. . . ....... ........+.++|++|.+++- 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~-~-~-~~~~~~~-~~~~~~~~~~~~DivF~a~~~-   75 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAP-S-F-GGTTGTL-QDAFDLEALKALDIIVTCQGG-   75 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCC-G-G-GTCCCBC-EETTCHHHHHTCSEEEECSCH-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccc-c-c-cCCceee-ecccchhhhhcCcEEEEecCc-
Confidence            5789999999999999999888763 2   566665432221111 1 1 1111111 111223356789999998852 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                                       .-...+...+.+.|.+++.++.++.|-.
T Consensus        76 -----------------~~s~~~~~~~~~~g~~~~VID~Ss~fR~  103 (146)
T d1t4ba1          76 -----------------DYTNEIYPKLRESGWQGYWIDAASSLRM  103 (146)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCCEEEECSSTTTT
T ss_pred             -----------------hHHHHhhHHHHhcCCCeecccCCccccc
Confidence                             1133455666677877677777766643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.64  E-value=0.00027  Score=54.38  Aligned_cols=109  Identities=17%  Similarity=0.048  Sum_probs=74.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcc---c--CCCCeEEEE-cccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHH---F--GNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~---~--~~~~v~~~~-~D~~~~~~~~vD~vih~A  188 (290)
                      |+|.|.|+ |.+|.+++..|+.+|.  ++.++|++.+..+....++   .  ......+.. .|  .+.+.+.|+||-.|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d--~~~~~~adiVvita   77 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--YSLLKGSEIIVVTA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC--GGGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC--HHHhccccEEEEec
Confidence            57899995 9999999999998874  7888987533222211111   1  122223332 34  35788999999999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                      |..  .....+..+.+..|..-...+.+.+++.+. -++++-|
T Consensus        78 g~~--~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          78 GLA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             CCC--CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             ccc--CCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            853  334456778889999999999999998874 4444443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.59  E-value=0.0002  Score=55.35  Aligned_cols=110  Identities=16%  Similarity=0.116  Sum_probs=70.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      |+|.|+| +|.+|..++..|+.+|.  +++++|++....+....++.     ..........|  .+.+.+.|+||-+||
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d--~~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND--WAALADADVVISTLG   78 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC--GGGGTTCSEEEECCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC--HHHhccccEEEEecc
Confidence            6899999 59999999999998873  78888875432222222111     12234444444  345788999999999


Q ss_pred             CCCCCCC--CCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEc
Q 022900          190 PASPVHY--KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS  229 (290)
Q Consensus       190 ~~~~~~~--~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vS  229 (290)
                      .......  ..+-.+.++.|..-...+.+.+++.+. -++.+-
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            5432211  112234678899999999999988874 344443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.58  E-value=0.00014  Score=53.47  Aligned_cols=97  Identities=14%  Similarity=0.068  Sum_probs=70.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      .+.++|+|+|.| .|-+|..-++.|++.|++|++++...   .+.........++.+...+..+..+.+++.|+.+.+  
T Consensus         8 l~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~---~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~--   81 (113)
T d1pjqa1           8 CQLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTF---IPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATD--   81 (113)
T ss_dssp             ECCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSC---CHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCS--
T ss_pred             EEeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccC---ChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCC--
Confidence            457899999999 78899999999999999999997533   233333445678899998888888999999986543  


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS  230 (290)
                             +.    ++|    ..+.+.|++.+ .+|++..
T Consensus        82 -------d~----~~n----~~i~~~a~~~~-ilVNv~D  104 (113)
T d1pjqa1          82 -------DD----TVN----QRVSDAAESRR-IFCNVVD  104 (113)
T ss_dssp             -------CH----HHH----HHHHHHHHHTT-CEEEETT
T ss_pred             -------CH----HHH----HHHHHHHHHcC-CEEEeCC
Confidence                   11    122    24566777765 4566554

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.56  E-value=0.00019  Score=55.86  Aligned_cols=103  Identities=15%  Similarity=0.035  Sum_probs=66.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-------eEEEEeCCCCCchhhhhcc-------cCCCCeEEEEcccccccccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGRKENVMHH-------FGNPNFELIRHDVVEPLLLEVD  182 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~-------~~~~~v~~~~~D~~~~~~~~vD  182 (290)
                      ++|.|+||+|.+|++++..|+..+-       .+..++..  ...+.....       ...........+-..+.+.+.|
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT--PMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD   81 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc--cchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence            5899999999999999999986542       34444432  222222111       1112223333344556788999


Q ss_pred             EEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CC
Q 022900          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA  223 (290)
Q Consensus       183 ~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~  223 (290)
                      +||-+||..  .....+-.+.++.|..-...+.+.+.+. +.
T Consensus        82 vVVitag~~--~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~  121 (154)
T d5mdha1          82 VAILVGSMP--RRDGMERKDLLKANVKIFKCQGAALDKYAKK  121 (154)
T ss_dssp             EEEECCSCC--CCTTCCTTTTHHHHHHHHHHHHHHHHHHSCT
T ss_pred             EEEEecccC--CCCCCchhHHHHHhHHHHHHHHHHHHhhCCC
Confidence            999999953  3333445566889999999999888664 43

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=9.7e-05  Score=57.52  Aligned_cols=70  Identities=16%  Similarity=0.119  Sum_probs=44.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeE-EEEcccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFE-LIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |+|.|.|+ |.+|..++..|++.|++|.+++|................... .+..+ ..+...++|+||.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~iii~v   71 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAN-DPDFLATSDLLLVTL   71 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEES-CHHHHHTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccc-hhhhhcccceEEEee
Confidence            68999996 999999999999999999999986533222111111111111 11112 223456789999765

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00042  Score=49.04  Aligned_cols=72  Identities=24%  Similarity=0.224  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++|+|+|.|. |..|.++++.|.++|++|++.|.+......  ... . ....+...+..+..+.++|.||-.-|+
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--DKL-P-EAVERHTGSLNDEWLMAADLIVASPGI   74 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--GGS-C-TTSCEEESBCCHHHHHHCSEEEECTTS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--HHH-h-hccceeecccchhhhccCCEEEECCCC
Confidence            67899999995 888999999999999999999975432211  111 1 233344444445556779999987775

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.44  E-value=0.00011  Score=57.51  Aligned_cols=69  Identities=22%  Similarity=0.207  Sum_probs=44.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~A  188 (290)
                      .|+|+|.|| |++|..+++.|.++|++|++++|+..+..+....   .........+....     .+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---VQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT---CTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc---ccccccccccccchhhhHhhhhccceeEeec
Confidence            479999985 9999999999999999999999865433332221   12233333333222     244567777544

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.43  E-value=0.00013  Score=56.20  Aligned_cols=109  Identities=16%  Similarity=0.168  Sum_probs=67.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-----CCCCeEEE-EcccccccccCCCEEEEccc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELI-RHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~-~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++|.|.|+ |.+|.+++..|+.++. +++++|.+.........++.     ......+. ..|  .+.+.+.|+||-+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d--~~~~~~advvvitag   78 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN--YADTANSDVIVVTSG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--GGGGTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc--HHHhcCCCEEEEeee
Confidence            58999995 9999999999988874 88888875443332222221     11222232 223  235678999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                      ...  ....+..+.++.|..-...+++..++.+. -++.+-|
T Consensus        79 ~~~--~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          79 APR--KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             CC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             ccC--CcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            532  23344556678999999999999988774 3444433

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.35  E-value=0.0015  Score=50.51  Aligned_cols=111  Identities=14%  Similarity=0.159  Sum_probs=72.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhccc-----CCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .+|.|.|+ |.+|.+++..|..++. ++.++|++....+....++.     ...+..+... -..+.+.+.|+||-+||.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~-~~~~~~~~advvvitag~   81 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCGGGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEec-ccccccCCCcEEEEeccc
Confidence            47999995 9999999988887764 78888875433332222221     1122233322 234567889999999996


Q ss_pred             CCCCC-C--CCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEc
Q 022900          191 ASPVH-Y--KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS  229 (290)
Q Consensus       191 ~~~~~-~--~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vS  229 (290)
                      ...+. .  ..+-.+.++.|..-...+.+.+++.+. -++++-
T Consensus        82 ~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv  124 (150)
T d1t2da1          82 TKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  124 (150)
T ss_dssp             SSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             ccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            43222 1  224566789999999999999988874 344443

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00015  Score=57.35  Aligned_cols=74  Identities=20%  Similarity=0.208  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++|+|+|.| +|+.+++++..|.+.|.+|+++.|+.++..+..........+..+  +..+....++|+|||+.-.
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~~~~~~dliIN~Tp~   89 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDELEGHEFDLIINATSS   89 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGGTTCCCSEEEECCSC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccccccccceeeccccc
Confidence            5789999999 699999999999999999998887643333322222222234333  3333345678999998753

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00046  Score=57.10  Aligned_cols=71  Identities=20%  Similarity=0.211  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccc---
Q 022900          114 RKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV---  174 (290)
Q Consensus       114 ~~~k~VlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~---  174 (290)
                      ++|++|+||+|                ||..|.+|++++..+|++|+++.-.....        ....+..+...-.   
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~~~~~t~~~m   75 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------TPPFVKRVDVMTALEM   75 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------CCTTEEEEECCSHHHH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--------cccccccceehhhHHH
Confidence            66778888875                69999999999999999999986432111        1234444443322   


Q ss_pred             ----cccccCCCEEEEcccCCC
Q 022900          175 ----EPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       175 ----~~~~~~vD~vih~Ag~~~  192 (290)
                          ...+.+.|++|++|++..
T Consensus        76 ~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHhhhccceeEeeeechhh
Confidence                223467999999999753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.00024  Score=56.29  Aligned_cols=74  Identities=16%  Similarity=0.223  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++++|+|.| +|+.+++++..|.+.+.+|+++.|+.++.+...........+.....|  +..+.++|+|||+...
T Consensus        16 ~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          16 RPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             CTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc--cccccccceeeecccc
Confidence            5788999999 789999999999998889999998754433333322222344444444  3346789999999764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.24  E-value=0.00098  Score=51.17  Aligned_cols=93  Identities=19%  Similarity=0.118  Sum_probs=56.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~  193 (290)
                      ++|.|.||||++|..+++.|.++++   ++..+......- +.+.    ...-+....++.+..+.++|+++-+++.   
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G-k~i~----~~~~~~~~~~~~~~~~~~~d~vf~a~p~---   74 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRMG----FAESSLRVGDVDSFDFSSVGLAFFAAAA---   74 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CEEE----ETTEEEECEEGGGCCGGGCSEEEECSCH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC-ccee----eccccchhccchhhhhccceEEEecCCc---
Confidence            6899999999999999999987664   566554321111 1111    1112333345555667789999977641   


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                     .....+...+.+.+.++|=.||..
T Consensus        75 ---------------~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          75 ---------------EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ---------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ---------------chhhhhccccccCCceEEeechhh
Confidence                           113334455566777777777754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.18  E-value=0.0001  Score=58.40  Aligned_cols=73  Identities=19%  Similarity=0.163  Sum_probs=47.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc--cccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--LLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~vD~vih~Ag  189 (290)
                      .++++|+|+||+|.+|...+..+...|++|++++++..+.+ ...+. +...+ +...|..+.  ...++|+||.+.|
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~-~~~~l-Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL-GAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHHHT-TCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccc-ccccc-cccee-eehhhhhhhhhccccccccccccc
Confidence            45789999999999999999888889999999987533222 22222 22111 111121111  2346999999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.10  E-value=0.00033  Score=55.78  Aligned_cols=73  Identities=21%  Similarity=0.113  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc-----cccCCCEEEEcc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~-----~~~~vD~vih~A  188 (290)
                      .++.+|+|+||+|++|...+.-+...|++|++++++... .+.+... +...+.-.+ +..++     .-+++|+||.+.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k-~~~~~~l-Ga~~vi~~~-~~~~~~~~~~~~~gvD~vid~v  106 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-HDYLRVL-GAKEVLARE-DVMAERIRPLDKQRWAAAVDPV  106 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-HHHHHHT-TCSEEEECC----------CCSCCEEEEEECS
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH-HHHHHhc-ccceeeecc-hhHHHHHHHhhccCcCEEEEcC
Confidence            346789999999999999988888899999999875432 2222222 222221111 11111     123699999998


Q ss_pred             c
Q 022900          189 C  189 (290)
Q Consensus       189 g  189 (290)
                      |
T Consensus       107 g  107 (176)
T d1xa0a2         107 G  107 (176)
T ss_dssp             T
T ss_pred             C
Confidence            7

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.08  E-value=0.00018  Score=56.42  Aligned_cols=72  Identities=21%  Similarity=0.299  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++++|+|.|+ |.+|..+++.|.+.|. ++++..|...+..+...    .....+...+-..+.+.++|+||++.+-
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~----~~~~~~~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR----DLGGEAVRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----HHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH----hhhcccccchhHHHHhccCCEEEEecCC
Confidence            67889999996 9999999999999998 57777764322222221    1234455556566677899999998773

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0023  Score=50.67  Aligned_cols=99  Identities=13%  Similarity=0.145  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CeEEEEe-CCCCC-chhhh----hcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVD-NFFTG-RKENV----MHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~-r~~~~-~~~~~----~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |++|.|.||||++|..|++.|.+.. .++..+. +...+ ..+.+    ....+.........+..+....++|+++.+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al   80 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT   80 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence            5789999999999999999999984 4665442 22111 11111    1111223334444444455567899999876


Q ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                      ..                  .........+.+.+.++|=.|+..
T Consensus        81 p~------------------~~s~~~~~~~~~~~~~vIDlSadf  106 (179)
T d2g17a1          81 AH------------------EVSHDLAPQFLQAGCVVFDLSGAF  106 (179)
T ss_dssp             CH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             cc------------------hhHHHHhhhhhhcCceeecccccc
Confidence            41                  012233445566677888888764

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.06  E-value=0.00012  Score=58.34  Aligned_cols=103  Identities=16%  Similarity=0.093  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCe-EEEEccccccc-----ccCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-ELIRHDVVEPL-----LLEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~-----~~~vD~vih~  187 (290)
                      .++.+|+|+||+|.+|...+.-....|++|++++++.+ ..+.+... +...+ +..+.|..+..     -.++|+|+++
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~-~~~~~~~~-Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~  105 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE-KIAYLKQI-GFDAAFNYKTVNSLEEALKKASPDGYDCYFDN  105 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHT-TCSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHH-HHHHHHhh-hhhhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence            35789999999999999999988889999999986422 11222221 22111 11111222211     2469999999


Q ss_pred             ccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccCC
Q 022900          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP  237 (290)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~~  237 (290)
                      .|.           ++       ....++.++ .+.+++.++..+.|+..
T Consensus       106 vG~-----------~~-------~~~~~~~l~-~~G~~v~~G~~~~~~~~  136 (182)
T d1v3va2         106 VGG-----------EF-------LNTVLSQMK-DFGKIAICGAISVYNRM  136 (182)
T ss_dssp             SCH-----------HH-------HHHHGGGEE-EEEEEEECCCGGGTTCT
T ss_pred             cCc-----------hh-------hhhhhhhcc-CCCeEEeecceeecccc
Confidence            872           00       112223222 23478888877776543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00018  Score=56.83  Aligned_cols=72  Identities=18%  Similarity=0.264  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEE---ccccccc-----ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR---HDVVEPL-----LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~---~D~~~~~-----~~~vD~vi  185 (290)
                      .++.+|+|+||+|.+|...+..+...|++|++++++.+ ..+.+.+. +..  ++++   .|+.+..     -.++|+++
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~-~~~~~~~~-Ga~--~vi~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE-GQKIVLQN-GAH--EVFNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHT-TCS--EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CCCCEEEEEeccccccccccccccccCccccccccccc-cccccccc-Ccc--cccccccccHHHHhhhhhccCCceEEe
Confidence            35679999999999999999988889999999986421 22222222 211  2222   2222221     13589999


Q ss_pred             Eccc
Q 022900          186 HLAC  189 (290)
Q Consensus       186 h~Ag  189 (290)
                      .+.|
T Consensus       103 d~~g  106 (174)
T d1yb5a2         103 EMLA  106 (174)
T ss_dssp             ESCH
T ss_pred             eccc
Confidence            9876

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.93  E-value=0.00049  Score=52.97  Aligned_cols=41  Identities=24%  Similarity=0.285  Sum_probs=35.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  153 (290)
                      +..+++|.|.||.|.+|..+++.|.+.|++|.+.+|.....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            35678999999999999999999999999999999865333

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00045  Score=47.34  Aligned_cols=35  Identities=40%  Similarity=0.411  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++.+|+|+||+|++|...+..+...|++|+++.++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s   65 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR   65 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECC
Confidence            56789999999999999999888889999999864

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.86  E-value=0.0015  Score=48.92  Aligned_cols=66  Identities=20%  Similarity=0.221  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~A  188 (290)
                      |+++|.| .|-+|+.+++.|.++|++|++++.+    ++.+... .......+.+|.+++.      +.++|.+|-..
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d----~~~~~~~-~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDIN----EEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESC----HHHHHHT-TTTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCc----HHHHHHH-HHhCCcceeeecccchhhhccCCccccEEEEEc
Confidence            4688888 5999999999999999999999853    3333333 2344567778888774      34688887544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.73  E-value=0.00096  Score=52.50  Aligned_cols=72  Identities=21%  Similarity=0.212  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc-----ccCCCEEEEccc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~vD~vih~Ag  189 (290)
                      ++.+|+|+||+|++|...+.-....|++|++++++.+. .+.+... +...+ +..-|...+.     -.++|+||.+.|
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~~~~l-Gad~v-i~~~~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA-ADYLKQL-GASEV-ISREDVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST-HHHHHHH-TCSEE-EEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH-HHHHHhh-cccce-EeccchhchhhhcccCCCceEEEecCc
Confidence            34579999999999999987777789999999885432 2223222 22222 2112222221     135899999877

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.69  E-value=0.0068  Score=48.64  Aligned_cols=32  Identities=44%  Similarity=0.603  Sum_probs=29.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      |+|.|.| .|++|..++..|+++|++|+++|.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCC
Confidence            5788997 9999999999999999999999864

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.67  E-value=0.0018  Score=50.25  Aligned_cols=33  Identities=33%  Similarity=0.510  Sum_probs=29.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.|.| .|.+|..+++.|.++|++|++.+|+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCc
Confidence            5788998 69999999999999999999998853

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.66  E-value=0.00025  Score=56.21  Aligned_cols=71  Identities=17%  Similarity=0.182  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEE---ccccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR---HDVVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~---~D~~~~~-----~~~vD~vih  186 (290)
                      ++.+|+|+||+|.+|...+..+...|.+|++++++.+ ..+.+... +. . .++.   .|+.+..     -.++|++|.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~-~~~~l~~~-Ga-~-~vi~~~~~~~~~~v~~~t~~~g~d~v~d  100 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA-KREMLSRL-GV-E-YVGDSRSVDFADEILELTDGYGVDVVLN  100 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH-HHHHHHTT-CC-S-EEEETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccc-cccccccc-cc-c-ccccCCccCHHHHHHHHhCCCCEEEEEe
Confidence            5679999999999999998888888999999986432 12222221 21 1 2222   1222221     136999999


Q ss_pred             ccc
Q 022900          187 LAC  189 (290)
Q Consensus       187 ~Ag  189 (290)
                      +.|
T Consensus       101 ~~g  103 (183)
T d1pqwa_         101 SLA  103 (183)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            887

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.63  E-value=0.0026  Score=49.46  Aligned_cols=68  Identities=13%  Similarity=0.119  Sum_probs=44.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ||+|.|.| .|.||..+++.|.+.|+  +|++.|++.    +..........++....+..+.....+|+||.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~   70 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP----ESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS   70 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH----HHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh----HHHHHHHHhhcchhhhhhhhhhhccccccccccC
Confidence            56899998 69999999999999986  788888643    2222221222233333344444455678888654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.62  E-value=0.0048  Score=47.37  Aligned_cols=96  Identities=15%  Similarity=0.192  Sum_probs=52.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-C---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG-D---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G-~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~  192 (290)
                      |+|.|.||||++|+.+++.|++.. +   ++..+..+....+  .... . .+...+........+.++|++|.+...  
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk--~~~~-~-~~~~~~~~~~~~~~~~~~DvvF~alp~--   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--APNF-G-KDAGMLHDAFDIESLKQLDAVITCQGG--   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB--CCCS-S-SCCCBCEETTCHHHHTTCSEEEECSCH--
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc--cccc-C-CcceeeecccchhhhccccEEEEecCc--
Confidence            579999999999999999888753 3   5554433211111  1111 1 111111111122346789999988741  


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vy  234 (290)
                                    .+  +..+...+.+.+.+.+.++-++.|
T Consensus        75 --------------~~--s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          75 --------------SY--TEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             --------------HH--HHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             --------------hH--HHHHhHHHHHcCCceEEEeCCccc
Confidence                          11  335566667777654444433334

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.00029  Score=55.68  Aligned_cols=73  Identities=19%  Similarity=0.159  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCC-eEEEEccccccc-----ccCCCEEEEcc
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPL-----LLEVDQIYHLA  188 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~-----~~~vD~vih~A  188 (290)
                      .+.+|+|+||+|.+|...+.-+...|++|++++++..+. +.+.+. +... ++.-+.|+.+..     -.++|+++.+.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~~l-Ga~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~  105 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKA-GAWQVINYREEDLVERLKEITGGKKVRVVYDSV  105 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHH-TCSEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH-HHHHhc-CCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence            467999999999999999888888899999998753222 222222 2221 111122332221     13589999988


Q ss_pred             c
Q 022900          189 C  189 (290)
Q Consensus       189 g  189 (290)
                      +
T Consensus       106 g  106 (179)
T d1qora2         106 G  106 (179)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.54  E-value=0.0059  Score=47.30  Aligned_cols=36  Identities=28%  Similarity=0.252  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..+.+|+|+| +|.||...+..+...|++|++++++.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~   60 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSP   60 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHH
Confidence            3456899997 79999999988888999999998753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.0012  Score=52.49  Aligned_cols=35  Identities=40%  Similarity=0.359  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      +.+|+|+||+|++|...+.-....|++|++++++.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~   66 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecch
Confidence            45899999999999998888888899999998743

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.51  E-value=0.013  Score=41.44  Aligned_cols=71  Identities=13%  Similarity=0.056  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCchHH-HHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVG-SHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG-~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ...++|.+.| -|++| ++||+.|.++|++|.+.|+......+.+.   . ..+.+..++-. ....++|.||...|+
T Consensus         6 ~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~---~-~Gi~v~~g~~~-~~i~~~d~vV~S~AI   77 (96)
T d1p3da1           6 RRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA---Q-AGAKIYIGHAE-EHIEGASVVVVSSAI   77 (96)
T ss_dssp             TTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH---H-TTCEEEESCCG-GGGTTCSEEEECTTS
T ss_pred             hhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH---H-CCCeEEECCcc-ccCCCCCEEEECCCc
Confidence            4568999999 45556 66899999999999999985322222222   2 24555554443 345789999987774

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0011  Score=51.86  Aligned_cols=72  Identities=21%  Similarity=0.209  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcc---cccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD---VVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D---~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+.+|+|.|+ |.||...+..+...|+++++++++..+. +...+. +..  .++..+   .......++|++|.+.|.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~l-Gad--~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKAL-GAD--EVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH-TCS--EEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHHhcc-CCc--EEEECchhhHHHHhcCCCceeeeeeec
Confidence            45779999985 8999998888878899999988754332 222322 211  122221   122234579999999873

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.38  E-value=0.0051  Score=46.05  Aligned_cols=72  Identities=18%  Similarity=0.275  Sum_probs=51.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEE-eCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~  195 (290)
                      |+|.|.|++|-+|+.+.+.+.++|+++++. +++                        ..+.+.++|+||-..-+     
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~------------------------~~~~~~~~DVvIDFS~p-----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN------------------------GVEELDSPDVVIDFSSP-----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT------------------------EEEECSCCSEEEECSCG-----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC------------------------cHHHhccCCEEEEecCH-----
Confidence            579999999999999999999999987654 211                        12234568999975432     


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 022900          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (290)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS  230 (290)
                                   .++...++.|.+.++.+|.=+|
T Consensus        52 -------------~~~~~~l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          52 -------------EALPKTVDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             -------------GGHHHHHHHHHHHTCEEEECCC
T ss_pred             -------------HHHHHHHHHHHhcCCCEEEEcC
Confidence                         2356778889888877654433

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.38  E-value=0.018  Score=44.13  Aligned_cols=92  Identities=13%  Similarity=0.133  Sum_probs=54.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC---eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~  194 (290)
                      +|.|.||||++|.+|++.|.+..+   ++..+.-+    ...-. ......-.....+..+..+.++|+++.+++.    
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~----~s~G~-~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~----   73 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA----RSAGK-SLKFKDQDITIEETTETAFEGVDIALFSAGS----   73 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG----GGTTC-EEEETTEEEEEEECCTTTTTTCSEEEECSCH----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc----ccccc-cccccCCcccccccchhhhhhhhhhhhccCc----
Confidence            799999999999999999988754   33333211    11101 1111122233344555667788988887652    


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCc
Q 022900          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (290)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~  232 (290)
                                    ..+......+.+.+.++|=.|+..
T Consensus        74 --------------~~s~~~~~~~~~~~~~VIDlSsdf   97 (154)
T d2gz1a1          74 --------------STSAKYAPYAVKAGVVVVDNTSYF   97 (154)
T ss_dssp             --------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             --------------cchhhHHhhhccccceehhcChhh
Confidence                          112334444556677887777764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.34  E-value=0.0048  Score=45.57  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ..++++|.| +|++|-+++..|.++|.+|+++.+..
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecc
Confidence            357899999 89999999999999999999998864

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.11  E-value=0.0039  Score=48.53  Aligned_cols=72  Identities=24%  Similarity=0.190  Sum_probs=46.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc----ccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH----DVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~----D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+.+|+|.|+ |.+|...+..+...|++|++++++..+.+ ...+. +..  +++..    |..+....++|.++.+.+
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~~l-Ga~--~~i~~~~~~~~~~~~~~~~d~vi~~~~  100 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKM-GAD--HYIATLEEGDWGEKYFDTFDLIVVCAS  100 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHH-TCS--EEEEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHH-Hhhcc-CCc--EEeeccchHHHHHhhhcccceEEEEec
Confidence            35679999986 99999988777778999999998654332 23322 211  12221    122223456899999877


Q ss_pred             C
Q 022900          190 P  190 (290)
Q Consensus       190 ~  190 (290)
                      .
T Consensus       101 ~  101 (168)
T d1piwa2         101 S  101 (168)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.11  E-value=0.0022  Score=50.61  Aligned_cols=75  Identities=17%  Similarity=0.109  Sum_probs=48.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc---cCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      .++|+|+|.| +|+.+++++..|.+.| +|+++.|+..+.++.....   ........+..+-.+......|++||+...
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~   93 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI   93 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence            6789999999 7889999999997767 8998887643333222211   111112223333344455678999998654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.0065  Score=46.37  Aligned_cols=69  Identities=19%  Similarity=0.264  Sum_probs=51.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccc------cCCCEEEEcc
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL------LEVDQIYHLA  188 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~------~~vD~vih~A  188 (290)
                      +|+|+| .|-+|..+++.|.++|.+|++++.+.+...+..... ....+.++.+|.+++..      .++|.+|-+.
T Consensus         5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~-~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR-LGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHh-hcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            699999 589999999999999999999986433222222222 23578999999988853      4688888664

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.011  Score=46.66  Aligned_cols=76  Identities=14%  Similarity=0.075  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhh---hcccCCCCeEEEEccccc-----ccccCCCEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVE-----PLLLEVDQI  184 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---~~~~~~~~v~~~~~D~~~-----~~~~~vD~v  184 (290)
                      .++++|+|.| +|+.|++++..|.+.|. +++++.|+.+......   ..............|+.+     +.+.+.|+|
T Consensus        16 l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          16 IKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence            5789999999 58999999999999987 6778887644332211   111111122233334333     234579999


Q ss_pred             EEcccC
Q 022900          185 YHLACP  190 (290)
Q Consensus       185 ih~Ag~  190 (290)
                      ||+...
T Consensus        95 IN~Tp~  100 (182)
T d1vi2a1          95 TNGTKV  100 (182)
T ss_dssp             EECSST
T ss_pred             ccccCC
Confidence            999754

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.95  E-value=0.00084  Score=53.60  Aligned_cols=33  Identities=30%  Similarity=0.249  Sum_probs=26.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEE-EeC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDN  148 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~-~~r  148 (290)
                      +.+|+|+||+|++|...++-+...|.++++ ++.
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~   64 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG   64 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccc
Confidence            468999999999999988887778986544 443

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.80  E-value=0.0084  Score=47.49  Aligned_cols=34  Identities=26%  Similarity=0.515  Sum_probs=27.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEe
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~  147 (290)
                      .++.+|.|.||||++|..+++.|.+.-. ++..+.
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            3456899999999999999999998743 555553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.012  Score=45.65  Aligned_cols=36  Identities=28%  Similarity=0.316  Sum_probs=29.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      ..+.+|+|.|+ |.+|...+..+...|+ +|++++++.
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~   61 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA   61 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH
Confidence            34568999985 9999999999988998 799988653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.70  E-value=0.0099  Score=43.65  Aligned_cols=34  Identities=24%  Similarity=0.393  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .++++|.| +|++|-.++..|.+.|.+|+++.+..
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            36899998 79999999999999999999998753

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.014  Score=45.57  Aligned_cols=38  Identities=29%  Similarity=0.431  Sum_probs=34.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ...+|+|+|.|.|.-+|+.++..|.++|++|+.+....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            36899999999999999999999999999999886543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.63  E-value=0.011  Score=46.03  Aligned_cols=97  Identities=16%  Similarity=0.278  Sum_probs=57.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCeEEE-EeCCCCC-chhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIV-VDNFFTG-RKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~-G~~V~~-~~r~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~  192 (290)
                      ..+|.|.|++|-+|+.+++.+.+. +.++++ ++|.... ...................|-.+..+..+|+||-..-   
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~---   80 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR---   80 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEecc---
Confidence            458999999999999999999886 556544 3432211 1111111111111111112333455667999996532   


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 022900          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (290)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS  230 (290)
                                     -.++...++.|.+.++.+|.=+|
T Consensus        81 ---------------p~~~~~~~~~a~~~~~~~ViGTT  103 (162)
T d1diha1          81 ---------------PEGTLNHLAFCRQHGKGMVIGTT  103 (162)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCEEEECCC
T ss_pred             ---------------HHHHHHHHHHHHhccceeEEecC
Confidence                           23455778889998877665444

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.62  E-value=0.0088  Score=46.57  Aligned_cols=67  Identities=13%  Similarity=0.214  Sum_probs=43.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ++++|+|.| +|+.|++++..|.+.|. +|.++.|+.++. +.+....+   ...+    ......++|+|||+.-.
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka-~~L~~~~~---~~~~----~~~~~~~~DliINaTpi   83 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTG-QYLAALYG---YAYI----NSLENQQADILVNVTSI   83 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHH-HHHHHHHT---CEEE----SCCTTCCCSEEEECSST
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHH-HHHHHhhh---hhhh----hcccccchhhheecccc
Confidence            467899999 69999999999999997 788887754322 22222222   1111    11223468999997543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.54  E-value=0.0061  Score=47.14  Aligned_cols=34  Identities=24%  Similarity=0.315  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |++|.+.| .|-+|..+++.|+++|++|.+.+|+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~   34 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ   34 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECch
Confidence            46899998 89999999999999999999998753

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.51  E-value=0.031  Score=44.50  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=35.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      ....+++|.|.| .|-||+.+++.|..-|.+|++.++...
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            457899999998 899999999999999999999988643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.47  E-value=0.0063  Score=48.26  Aligned_cols=42  Identities=19%  Similarity=0.025  Sum_probs=32.0

Q ss_pred             CCCEEEE-EcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhh
Q 022900          115 KGLRIVV-TGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN  156 (290)
Q Consensus       115 ~~k~VlV-TGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~  156 (290)
                      .+.+|+| +||+|.+|...+.-....|++|+++.+.....++.
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~   70 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV   70 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchH
Confidence            3455666 69999999999888877899999998765544433

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.37  E-value=0.0049  Score=48.50  Aligned_cols=37  Identities=27%  Similarity=0.329  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      ...+||+|+|.|-|.-+|+-++..|+++|+.|+.++.
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~   61 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDV   61 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecc
Confidence            4578999999999999999999999999999998864

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.011  Score=45.92  Aligned_cols=36  Identities=31%  Similarity=0.278  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+.+|+|+|.| .|.||+.+++.|...|.+|++.+..
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d   56 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEID   56 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecc
Confidence            36899999999 9999999999999999999999864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.024  Score=44.28  Aligned_cols=38  Identities=24%  Similarity=0.275  Sum_probs=34.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ...||+|+|.|.|.-+|+.++..|+++|++|+.+....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            37899999999999999999999999999999987643

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.30  E-value=0.0092  Score=47.10  Aligned_cols=32  Identities=22%  Similarity=0.404  Sum_probs=26.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEe
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~  147 (290)
                      |++|.|.||||++|..+++.|.+.-. ++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            56899999999999999999998644 565553

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.29  E-value=0.054  Score=39.28  Aligned_cols=34  Identities=26%  Similarity=0.311  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .++++|.| +|+||-.++..|.+.|.+|+++.+..
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            36899999 89999999999999999999998763

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.29  E-value=0.016  Score=42.54  Aligned_cols=34  Identities=26%  Similarity=0.528  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +.++|+|.| +|++|..++..|.+.|.+|+++.+.
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEec
Confidence            457899998 7999999999999999999999875

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.017  Score=47.58  Aligned_cols=35  Identities=23%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      +++++|+|.| .|++|.+++..|+..|. +++++|..
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            5678999999 89999999999999998 67777644

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.26  E-value=0.0037  Score=49.22  Aligned_cols=35  Identities=29%  Similarity=0.318  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      .+.+|+|+|+ |.||...+..+...|+ +|++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~   63 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP   63 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccc
Confidence            4679999996 8999999888888998 799998743

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.23  E-value=0.0058  Score=47.18  Aligned_cols=64  Identities=16%  Similarity=0.264  Sum_probs=42.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |+|-|.| .|-+|..+++.|+++|++|++.+|+.....+...     ...  ...+-.++...++|+||-|-
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-----~~~--~~~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----AGA--ETASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----TTC--EECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-----hhh--hhcccHHHHHhCCCeEEEEc
Confidence            5788998 7999999999999999999999875322222111     111  12233344555678777654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.14  E-value=0.015  Score=46.85  Aligned_cols=34  Identities=29%  Similarity=0.360  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..++|+|.| +|..|...|..|+++|++|++++|.
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            456899999 7999999999999999999999985

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.13  E-value=0.019  Score=45.30  Aligned_cols=62  Identities=19%  Similarity=0.117  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ..+++|.|.| .|-||+.+++.+..-|.+|++.++.......         .    ..+-.++.+..+|+|+.+.-
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~---------~----~~~~l~ell~~sDiv~~~~p  101 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW---------R----FTNSLEEALREARAAVCALP  101 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS---------C----CBSCSHHHHTTCSEEEECCC
T ss_pred             ccCceEEEec-cccccccceeeeeccccccccccccccccce---------e----eeechhhhhhccchhhcccc
Confidence            6889999999 7889999999999999999999875321110         0    11234667778888887553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.12  E-value=0.018  Score=46.32  Aligned_cols=36  Identities=31%  Similarity=0.483  Sum_probs=32.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+++++|.|-| .|-+|.++++.|.+.|++|++.+.+
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch
Confidence            37899999998 9999999999999999999998753

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.10  E-value=0.017  Score=45.15  Aligned_cols=113  Identities=11%  Similarity=0.113  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCchHHHH--HHHHHHHC----CCeEEEEeCCCCCchhhh---hccc--CCCCeEEEEcccccccccCCCEE
Q 022900          116 GLRIVVTGGAGFVGSH--LVDRLIAR----GDSVIVVDNFFTGRKENV---MHHF--GNPNFELIRHDVVEPLLLEVDQI  184 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~--la~~L~~~----G~~V~~~~r~~~~~~~~~---~~~~--~~~~v~~~~~D~~~~~~~~vD~v  184 (290)
                      .++|.|.|| |.+|..  ++..|+..    +.+++++|.+..+.+...   .+..  ......+...+-.++.+.++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            368999995 777754  34445543    458999988643322111   1111  23456666666667788999999


Q ss_pred             EEcccCCCCCCCCCChHH------------------------HHHHHHHHHHHHHHHHHHcCC--eEEEEc
Q 022900          185 YHLACPASPVHYKFNPVK------------------------TIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (290)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~------------------------~~~~Nv~gt~~ll~a~~~~~~--riV~vS  229 (290)
                      |+.++.......+.+...                        ...-|+.-...+++.+++...  .++.+|
T Consensus        81 v~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          81 INTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             EECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             eeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            999875321111000000                        012477778888888887764  444443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.09  E-value=0.02  Score=44.86  Aligned_cols=69  Identities=20%  Similarity=0.245  Sum_probs=45.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccC----------CCCeEEEEcccccccccCCCEEEE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG----------NPNFELIRHDVVEPLLLEVDQIYH  186 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~v~~~~~D~~~~~~~~vD~vih  186 (290)
                      |+|.|.| +|-.|.+++..|++.|++|++..|...  ++.+..+..          -........+-.++.+.+.|+||.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~   77 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL   77 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence            6899999 799999999999999999999987321  211211111          012233334445566778999987


Q ss_pred             cc
Q 022900          187 LA  188 (290)
Q Consensus       187 ~A  188 (290)
                      +.
T Consensus        78 av   79 (180)
T d1txga2          78 GV   79 (180)
T ss_dssp             CS
T ss_pred             cc
Confidence            43

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.07  E-value=0.0076  Score=45.91  Aligned_cols=40  Identities=30%  Similarity=0.472  Sum_probs=34.7

Q ss_pred             CCCcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       108 ~p~~~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      .|...+.++|+|+|.|| |.+|..-++.|++.|++|++++.
T Consensus         5 lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           5 LQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             EEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             chhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            34455689999999995 88999999999999999999964

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.029  Score=51.67  Aligned_cols=105  Identities=10%  Similarity=0.112  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch----------h------------hhhcccCCCCeEEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------E------------NVMHHFGNPNFELIR  170 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------~------------~~~~~~~~~~v~~~~  170 (290)
                      +...+|+|.| .|++|.++++.|+..|. +++++|...-...          +            .+.++....+++.+.
T Consensus        23 L~~s~VlvvG-~gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~  101 (529)
T d1yova1          23 LESAHVCLIN-ATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE  101 (529)
T ss_dssp             HHHCEEEECC-CSHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc
Confidence            4456999999 58899999999999996 7888865321110          0            011111222444555


Q ss_pred             ccccc------ccccCCCEEEEcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccccC
Q 022900          171 HDVVE------PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (290)
Q Consensus       171 ~D~~~------~~~~~vD~vih~Ag~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vSS~~vyg~  236 (290)
                      .+..+      ..+.++|+||.+..                 |......+-+.|.+.++.+|.+++.+.||.
T Consensus       102 ~~~~~~~~~~~~~~~~~dvVv~~~~-----------------~~~~~~~l~~~c~~~~ip~i~~~~~G~~G~  156 (529)
T d1yova1         102 ESPENLLDNDPSFFCRFTVVVATQL-----------------PESTSLRLADVLWNSQIPLLICRTYGLVGY  156 (529)
T ss_dssp             SCHHHHHHSCGGGGGGCSEEEEESC-----------------CHHHHHHHHHHHHHHTCCEEEEEEETTEEE
T ss_pred             CCchhhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeccCCEEE
Confidence            44432      23456899997642                 222334566778888889999998887773

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.99  E-value=0.013  Score=47.01  Aligned_cols=37  Identities=24%  Similarity=0.381  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ....+++|.|.| .|.||+.+++.|..-|.+|++.++.
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~   75 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIF   75 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcc
Confidence            457899999999 9999999999999999999999865

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.97  E-value=0.026  Score=43.91  Aligned_cols=38  Identities=16%  Similarity=0.253  Sum_probs=32.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE  155 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~  155 (290)
                      ++|-|.| -|-+|..+++.|++.|++|++.+|+.++..+
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~   40 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDD   40 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            4789999 7999999999999999999999986544433

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.95  E-value=0.029  Score=40.57  Aligned_cols=33  Identities=24%  Similarity=0.401  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ++++|.| +|++|..++..|.+.|.+|+++.|..
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecc
Confidence            6899999 79999999999999999999998753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.02  Score=45.58  Aligned_cols=36  Identities=28%  Similarity=0.466  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      .-++|.|.|| |.+|..++..++..|++|+++|++.+
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            3479999995 99999999999999999999998643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.86  E-value=0.04  Score=38.22  Aligned_cols=68  Identities=15%  Similarity=0.129  Sum_probs=44.2

Q ss_pred             CEEEEEcCCchHH-HHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          117 LRIVVTGGAGFVG-SHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       117 k~VlVTGasG~IG-~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      |+|.+.| -|++| +.||+.|.++|+.|.+.|+......+.+.    ...+.+..+ -..+.+.+.|.||...++
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~----~~Gi~i~~g-h~~~~i~~~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR----KLGIPIFVP-HSADNWYDPDLVIKTPAV   70 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH----HTTCCEESS-CCTTSCCCCSEEEECTTC
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH----HCCCeEEee-ecccccCCCCEEEEecCc
Confidence            6788888 56666 47899999999999999975422222222    223444332 222334678999988875

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=94.86  E-value=0.018  Score=44.60  Aligned_cols=32  Identities=28%  Similarity=0.271  Sum_probs=30.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      |+|.|.| +|-+|..++..|.++|++|++++|+
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~   33 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID   33 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECC
Confidence            6899999 5999999999999999999999985

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.81  E-value=0.014  Score=44.34  Aligned_cols=64  Identities=19%  Similarity=0.154  Sum_probs=42.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      |+|.|.| .|-+|..+++.|.++|++|++.++...........-   ..+    .+..++.+.++|+||-+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~----~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART---VGV----TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH---HTC----EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhc---ccc----cccHHHHHhhcCeEEEEe
Confidence            5788897 799999999999999999998876432222111111   111    123445667799988764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.79  E-value=0.0052  Score=47.69  Aligned_cols=36  Identities=25%  Similarity=0.257  Sum_probs=30.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      ..+.+|+|.|++|.+|...+..+...|. +|++++++
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~   62 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR   62 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccc
Confidence            3467899999999999999888888885 88888764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.70  E-value=0.024  Score=46.54  Aligned_cols=36  Identities=31%  Similarity=0.466  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+++++|.|-| .|-+|.++++.|.+.|++|++.+.+
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc
Confidence            37899999999 9999999999999999999998753

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.57  E-value=0.0052  Score=48.07  Aligned_cols=71  Identities=23%  Similarity=0.168  Sum_probs=42.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEE-EeCCCCCchhhhhcccCCCCeEEEEcc---ccccc----ccCCCEEE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFTGRKENVMHHFGNPNFELIRHD---VVEPL----LLEVDQIY  185 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~v~~~~~D---~~~~~----~~~vD~vi  185 (290)
                      ..+.+|+|.|+ |.||...+..+...|+++++ ++++. .+.+..++. +.  .+++..+   ..+..    -.++|++|
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~-~k~~~a~~~-Ga--~~~i~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE-SRLELAKQL-GA--THVINSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH-HHHHHHHHH-TC--SEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH-HHHHHHHHc-CC--eEEEeCCCcCHHHHHHHHcCCCCcEEE
Confidence            35678999996 99999999888788886554 44422 222222222 22  2233322   22211    13589999


Q ss_pred             Eccc
Q 022900          186 HLAC  189 (290)
Q Consensus       186 h~Ag  189 (290)
                      .|.|
T Consensus       102 d~~G  105 (174)
T d1f8fa2         102 ESTG  105 (174)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            9988

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.50  E-value=0.04  Score=43.33  Aligned_cols=76  Identities=20%  Similarity=0.163  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------h-------hhcccCCCCeEEE-Ecccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-----------N-------VMHHFGNPNFELI-RHDVV  174 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-----------~-------~~~~~~~~~v~~~-~~D~~  174 (290)
                      .+.|+|+|.| +|..|...+..|+++|++|+++++....-..           .       ....+....+++. ..+++
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~~Vt  119 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT  119 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCCEEc
Confidence            5678999999 8999999999999999999999886321100           0       0000111234443 34555


Q ss_pred             cccccCCCEEEEcccC
Q 022900          175 EPLLLEVDQIYHLACP  190 (290)
Q Consensus       175 ~~~~~~vD~vih~Ag~  190 (290)
                      .+...+.|.||...|.
T Consensus       120 ~~~~~~~d~vilAtG~  135 (179)
T d1ps9a3         120 ADQLQAFDETILASGI  135 (179)
T ss_dssp             SSSSCCSSEEEECCCE
T ss_pred             ccccccceeEEEeecC
Confidence            5666778999987774

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.42  E-value=0.042  Score=40.13  Aligned_cols=32  Identities=25%  Similarity=0.395  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++++|.| +|+||.+++..|.+.|.+|+++.+.
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~   55 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQ   55 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEec
Confidence            6899999 7999999999999999999999875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.36  E-value=0.034  Score=40.39  Aligned_cols=34  Identities=15%  Similarity=0.285  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .++|+|.| +|++|-+++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            46899999 79999999999999999999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.31  E-value=0.033  Score=41.44  Aligned_cols=34  Identities=26%  Similarity=0.461  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..++|+|.| +|++|-+++..|.+.|.+|+++.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~   67 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTA   67 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeec
Confidence            357899999 8999999999999999999999875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.28  E-value=0.031  Score=44.71  Aligned_cols=65  Identities=22%  Similarity=0.321  Sum_probs=45.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcc
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~A  188 (290)
                      ....+++|.|.| .|-||+.+++.|..-|.+|++.++......+        ..+...   -.++.+..+|+|+.+.
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------~~~~~~---~l~~l~~~~D~v~~~~  105 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------PDFDYV---SLEDLFKQSDVIDLHV  105 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------TTCEEC---CHHHHHHHCSEEEECC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccchhhh--------cchhHH---HHHHHHHhcccceeee
Confidence            346789999999 8999999999999999999999875322111        122221   2344556678777554

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.21  E-value=0.052  Score=41.70  Aligned_cols=71  Identities=20%  Similarity=0.132  Sum_probs=41.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEccc----ccc-----cccCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV----VEP-----LLLEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~----~~~-----~~~~vD~  183 (290)
                      ..+.+|+|.|+ |++|...+..+...|+ .|++++++ +.+.+..++. +...  ++..+-    ...     .-.++|+
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~-~~k~~~ak~l-Ga~~--~i~~~~~~~~~~~~~~~~~~~g~D~  101 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN-KDKFARAKEF-GATE--CINPQDFSKPIQEVLIEMTDGGVDY  101 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-GGGHHHHHHH-TCSE--EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc-HHHHHHHHHh-CCcE--EEeCCchhhHHHHHHHHHcCCCCcE
Confidence            35679999997 6899988888888897 56666543 2223333322 2211  222211    111     1246999


Q ss_pred             EEEccc
Q 022900          184 IYHLAC  189 (290)
Q Consensus       184 vih~Ag  189 (290)
                      +|.+.|
T Consensus       102 vid~~G  107 (176)
T d2fzwa2         102 SFECIG  107 (176)
T ss_dssp             EEECSC
T ss_pred             eeecCC
Confidence            999987

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.037  Score=39.98  Aligned_cols=33  Identities=27%  Similarity=0.451  Sum_probs=30.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ++|+|.| +|++|..++..|.+.|.+|+++.|..
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            5899998 89999999999999999999998763

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.05  Score=39.82  Aligned_cols=33  Identities=24%  Similarity=0.329  Sum_probs=30.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+++|.| +|+||-.++..|.+.|.+|+++.|..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            6899999 79999999999999999999998863

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.11  E-value=0.019  Score=45.61  Aligned_cols=35  Identities=26%  Similarity=0.135  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +.|++|.|.| +|-.|.+++..|++.|++|++.+|+
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~   39 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN   39 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec
Confidence            5667899999 7999999999999999999999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.03  E-value=0.044  Score=39.45  Aligned_cols=32  Identities=31%  Similarity=0.426  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++++|.| +|++|-+++..|.+.|.+|+++.+.
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeee
Confidence            5899998 8999999999999999999999775

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.02  E-value=0.098  Score=41.10  Aligned_cols=66  Identities=18%  Similarity=0.090  Sum_probs=46.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ...+++|.|.| .|.||+.+++.+..-|.+|+..++........        .   ...+-.++.+...|+|+.++..
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~--------~---~~~~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGN--------A---TQVQHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTT--------C---EECSCHHHHHHHCSEEEECCCS
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhh--------h---hhhhhHHHHHhhccceeecccC
Confidence            46789999998 99999999999999999999998743221110        1   1223344556667877766543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.01  E-value=0.027  Score=43.91  Aligned_cols=71  Identities=18%  Similarity=0.133  Sum_probs=43.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc---------cccCCCE
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---------LLLEVDQ  183 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~---------~~~~vD~  183 (290)
                      ..+.+|+|.| +|.||...+..+...|+ .|++.+.+.. +.+..++. +..  +++...-.++         .-.++|+
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~-r~~~a~~~-Ga~--~~i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGE-KFPKAKAL-GAT--DCLNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGG-GHHHHHHT-TCS--EEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchH-HHHHHHHh-CCC--cccCCccchhhhhhhHhhhhcCCCcE
Confidence            3567999998 69999999999999998 5666665432 22322222 211  1222111111         1246999


Q ss_pred             EEEccc
Q 022900          184 IYHLAC  189 (290)
Q Consensus       184 vih~Ag  189 (290)
                      +|.|+|
T Consensus       102 vie~~G  107 (174)
T d1e3ia2         102 SLDCAG  107 (174)
T ss_dssp             EEESSC
T ss_pred             EEEecc
Confidence            999998

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.99  E-value=0.036  Score=43.75  Aligned_cols=31  Identities=35%  Similarity=0.579  Sum_probs=26.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      |+|.|.| .|++|..++..| ++|++|+++|.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din   31 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL   31 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence            5788997 899999998755 579999999865

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.98  E-value=0.057  Score=38.94  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .+++|+|.| +|++|..++..|.+.|.+|+++.+..
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            457999999 89999999999999999999998753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.89  E-value=0.075  Score=41.74  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ....++++.|.| .|.||+.+++.+..-|.+|++.++..
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            346789999999 89999999999999999999998754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.87  E-value=0.03  Score=44.20  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      +-++|.|.|| |.+|..++..++..|++|+++|++.+
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            4568999995 99999999999999999999998643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.083  Score=47.15  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=29.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      +++.+|+|.| .|++|.++++.|+..|. +++++|..
T Consensus        35 l~~~kVlvvG-~GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEEC-SSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEECC
Confidence            3467899999 57899999999999998 78888654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.85  E-value=0.034  Score=43.27  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEc--ccccccccCCCEEEEcccCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH--DVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~--D~~~~~~~~vD~vih~Ag~~  191 (290)
                      ..+|+|.| .|-.|..-++.....|+.|.++|.+.++.+ .+..... ..++....  +..++.+.+.|+||.++-+.
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~-~l~~~~~-~~~~~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLS-YLETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHH-HHHHhhc-ccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence            35899999 799999999999999999999997543332 2222222 23333332  33456677899999988753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.76  E-value=0.026  Score=42.85  Aligned_cols=63  Identities=14%  Similarity=0.167  Sum_probs=40.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~  187 (290)
                      |+|.+.| .|-+|.++++.|++.| ++|++.+|+.++.+....+    ..+.... |  .+.+.+.|+||-+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~----~~~~~~~-~--~~~v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----LGVETSA-T--LPELHSDDVLILA   64 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----TCCEEES-S--CCCCCTTSEEEEC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh----ccccccc-c--cccccccceEEEe
Confidence            5788888 6999999999999887 8999998754333222211    1232221 1  1234567888854

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.73  E-value=0.039  Score=44.73  Aligned_cols=33  Identities=30%  Similarity=0.368  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +|+|+|.| +|.-|...+..|+++|++|+++++.
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            47899999 8999999999999999999999864

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=93.73  E-value=0.033  Score=43.11  Aligned_cols=36  Identities=31%  Similarity=0.233  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      ..+.+|+|.|+ |++|...+..+...|. +|++++++.
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~   63 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK   63 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH
Confidence            45679999998 7799999999999885 788887653

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.69  E-value=0.029  Score=43.82  Aligned_cols=37  Identities=27%  Similarity=0.276  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT  151 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~  151 (290)
                      ..+.+|+|+| .|++|...+..+...|. +|++++.+.+
T Consensus        28 ~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~   65 (176)
T d1d1ta2          28 KPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKD   65 (176)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGG
T ss_pred             CCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHH
Confidence            4567999998 59999999999999985 8999987543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.69  E-value=0.049  Score=39.79  Aligned_cols=32  Identities=25%  Similarity=0.230  Sum_probs=29.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++++|.| +|+||.+++..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            5799999 7999999999999999999999875

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.68  E-value=0.043  Score=46.78  Aligned_cols=35  Identities=31%  Similarity=0.565  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      +.|+|+|.| +|.-|...|..|+++|++|+++.++.
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            357999999 89999999999999999999997653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.61  E-value=0.26  Score=37.73  Aligned_cols=65  Identities=11%  Similarity=0.140  Sum_probs=40.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~  190 (290)
                      ..+|.|.| .|.+|+..++.+.+. +.+++++........         ........+-.+....++|+|+.+...
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---------~~~~~~~~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---------TKTPVFDVADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---------SSSCEEEGGGGGGTTTTCSEEEECSCT
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc---------cccccccchhhhhhccccceEEEeCCC
Confidence            45799999 799999999999875 557776543221111         112223333344445679999987653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.51  E-value=0.5  Score=34.94  Aligned_cols=71  Identities=17%  Similarity=0.129  Sum_probs=46.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCeEEEE-eCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCCCCCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~~~~~  195 (290)
                      +|.|.|++|-+|+.+++.+.+. +.++.+. ++..                     ++......++|+||-..-+     
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~---------------------~~~~~~~~~~DvvIDFS~p-----   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD---------------------PLSLLTDGNTEVVIDFTHP-----   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC---------------------CTHHHHTTTCSEEEECCCT-----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC---------------------chhhhccccCCEEEEcccH-----
Confidence            6899999999999999998775 5566553 3210                     1111122457899876532     


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 022900          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL  227 (290)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~  227 (290)
                                   ..+...++.|.+.++.+|.
T Consensus        55 -------------~~~~~~~~~~~~~~~~~Vi   73 (135)
T d1yl7a1          55 -------------DVVMGNLEFLIDNGIHAVV   73 (135)
T ss_dssp             -------------TTHHHHHHHHHHTTCEEEE
T ss_pred             -------------HHHHHHHHHHHhcCCCEEE
Confidence                         1245677888888887655

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.43  E-value=0.018  Score=44.92  Aligned_cols=36  Identities=22%  Similarity=0.439  Sum_probs=31.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  153 (290)
                      |+|-|.| .|-+|..+++.|++.|++|++.+|+.++.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            4688888 99999999999999999999998854333

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.43  E-value=0.095  Score=41.19  Aligned_cols=38  Identities=16%  Similarity=0.193  Sum_probs=33.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ....+++|.|.| .|.||+.+++.|..-|.+|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            346789999999 89999999999999999999998854

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.40  E-value=0.13  Score=40.51  Aligned_cols=39  Identities=18%  Similarity=0.144  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 022900          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (290)
Q Consensus       112 ~~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  151 (290)
                      ....++++.|.| .|.||+.+++.+...|.+|+..++...
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            446789999999 899999999999999999999987543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.30  E-value=0.037  Score=45.38  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=28.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .|+|.| +|.+|.++|.+|+++|.+|+++++.
T Consensus         6 DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           6 EAVVIG-GGIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            499999 8999999999999999999999875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.10  E-value=0.052  Score=39.76  Aligned_cols=64  Identities=16%  Similarity=0.103  Sum_probs=45.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEccccccc------ccCCCEEEEcc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------~~~vD~vih~A  188 (290)
                      |+|+|+| .|-+|..+++.|  +|+.|++++.+......    . ....+.++.+|.+++.      +.+.+.+|-+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~----~-~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKK----V-LRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHH----H-HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHH----H-HhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            5799998 688999999999  46678888764322221    1 2346888999998875      34688888543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.99  E-value=0.047  Score=42.25  Aligned_cols=35  Identities=17%  Similarity=0.173  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      .+|+|+|.| +|..|...|..|.++|+ .|+++++..
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            357899999 89999999999999998 599998763

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.96  E-value=0.065  Score=39.07  Aligned_cols=33  Identities=30%  Similarity=0.400  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ++++|.| +|+||-.++..|.+.|.+|+++.|..
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            6899999 79999999999999999999998753

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.95  E-value=0.78  Score=33.41  Aligned_cols=87  Identities=16%  Similarity=0.110  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCC---chHHHHHHHHHHHCC-CeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          114 RKGLRIVVTGGA---GFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGas---G~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      ++.++|.|.|||   +..|..+.+.|.+.| .+|+.+..    ..+.+...      .++ .++.+ .-..+|.++-+..
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP----~~~~i~G~------~~y-~sl~d-lp~~vDlvvi~vp   73 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNI----KEEEVQGV------KAY-KSVKD-IPDEIDLAIIVVP   73 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECS----SCSEETTE------ECB-SSTTS-CSSCCSEEEECSC
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEecc----CccccCCe------Eee-cchhh-cCCCCceEEEecC
Confidence            456899999998   899999999987765 58888842    11111111      111 12211 1235788885432


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcC
Q 022900          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (290)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-riV~vSS  230 (290)
                                        -..+..+++.|.+.|. .++++|+
T Consensus        74 ------------------~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          74 ------------------KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             ------------------HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             ------------------hHHhHHHHHHHHHcCCCEEEEecc
Confidence                              1224467788888886 5666665

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.95  E-value=0.085  Score=37.40  Aligned_cols=36  Identities=19%  Similarity=0.185  Sum_probs=30.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ...+|+|+|.| +|--|..++.+|++.+.+|+.+.|.
T Consensus        29 ~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r   64 (107)
T d2gv8a2          29 LFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLL   64 (107)
T ss_dssp             GGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECT
T ss_pred             hcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEec
Confidence            46889999999 7899999999999988887777664

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.84  E-value=0.082  Score=42.64  Aligned_cols=34  Identities=26%  Similarity=0.151  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .++|+|.| +|..|..++..|+++|++|++++|..
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45899999 79999999999999999999998753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.76  E-value=0.089  Score=38.54  Aligned_cols=33  Identities=18%  Similarity=0.349  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .++++|.| +|+||-+++..|.+.|.+|+++.+.
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEee
Confidence            36899999 8999999999999999999999775

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=92.75  E-value=0.044  Score=42.55  Aligned_cols=36  Identities=28%  Similarity=0.196  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      ..+.+|+|.|+ |++|...+..+...|+ +|++++++.
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~   62 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK   62 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH
Confidence            45679999985 9999999999988886 688887643

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.55  E-value=0.015  Score=45.39  Aligned_cols=35  Identities=31%  Similarity=0.328  Sum_probs=28.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      .++.+|+|.|+ |.||...+..+...|+ +|++++++
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~   61 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR   61 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC
T ss_pred             CCCCEEEEEcC-Ccchhhhhhhhhcccccccccccch
Confidence            34668999985 9999998888888897 68888764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.30  E-value=0.15  Score=40.89  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ...++|+|.| +|..|...|..|.++|++|+++++..
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            4678999999 89999999999999999999998753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.27  E-value=0.12  Score=39.33  Aligned_cols=35  Identities=29%  Similarity=0.278  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ..+.+|+|.|+ |.+|...+..+...|++|++++++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~   60 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDID   60 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecch
Confidence            35678999885 999999888888889999999875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.24  E-value=0.068  Score=44.13  Aligned_cols=34  Identities=26%  Similarity=0.402  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +.|+|+|.| +|..|...|..|.++|++|+++++.
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            457999999 8999999999999999999999864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.13  E-value=0.072  Score=41.64  Aligned_cols=32  Identities=25%  Similarity=0.373  Sum_probs=29.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      -|+|.| +|.-|...|..|+++|++|.++.++.
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            489999 89999999999999999999998753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.05  E-value=0.064  Score=43.35  Aligned_cols=32  Identities=22%  Similarity=0.543  Sum_probs=29.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      |+|+|.| +|.-|...+..|.++|++|+++.+.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence            5799999 6999999999999999999999764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=91.94  E-value=0.046  Score=42.16  Aligned_cols=70  Identities=17%  Similarity=0.132  Sum_probs=41.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchhhhhcccCCCCeEEEEcc--ccccc-----ccCCCEEEE
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHD--VVEPL-----LLEVDQIYH  186 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D--~~~~~-----~~~vD~vih  186 (290)
                      .+.+|+|.|+ |.+|...+..+...|. .|++++++.. +.+..... .  ..+++..+  ..+..     -.++|++|.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~-k~~~~~~~-g--a~~~i~~~~~~~~~~~~~~~~~g~d~vid  106 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE-KLKLAERL-G--ADHVVDARRDPVKQVMELTRGRGVNVAMD  106 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH-HHHHHHHT-T--CSEEEETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhH-HHHHHhhc-c--cceeecCcccHHHHHHHhhCCCCceEEEE
Confidence            4678999985 9999998888877786 5666665321 11222221 2  12233322  11111     135999999


Q ss_pred             ccc
Q 022900          187 LAC  189 (290)
Q Consensus       187 ~Ag  189 (290)
                      ++|
T Consensus       107 ~~g  109 (172)
T d1h2ba2         107 FVG  109 (172)
T ss_dssp             SSC
T ss_pred             ecC
Confidence            998

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.88  E-value=0.091  Score=40.46  Aligned_cols=36  Identities=22%  Similarity=0.253  Sum_probs=33.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ...+|+++|.| -|++|+-++..|...|.+|+++...
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D   55 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEID   55 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecC
Confidence            46889999999 9999999999999999999999764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.87  E-value=0.095  Score=39.47  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--eEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~--~V~~~~r~  149 (290)
                      +|+|+|.| +|++|..++..|.+.+.  +|+++++.
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~   36 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPN   36 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECC
Confidence            68999999 79999999999999875  78888765

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.64  E-value=0.23  Score=38.24  Aligned_cols=112  Identities=12%  Similarity=0.028  Sum_probs=61.1

Q ss_pred             CEEEEEcC-CchHHHHHHHHHHHCC----CeEEEEeCCCCCchhhhhcc-----c--CCCCeEEEEcccccccccCCCEE
Q 022900          117 LRIVVTGG-AGFVGSHLVDRLIARG----DSVIVVDNFFTGRKENVMHH-----F--GNPNFELIRHDVVEPLLLEVDQI  184 (290)
Q Consensus       117 k~VlVTGa-sG~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~-----~--~~~~v~~~~~D~~~~~~~~vD~v  184 (290)
                      ++|.|.|| +.+.+..++..+....    .++.++|.+....+.+....     .  ......+....-..+.+.+.|+|
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV   81 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV   81 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence            47899996 4455566655555432    37888886532221111111     1  12344444443335567899999


Q ss_pred             EEcccCCCCCCCCC----------------ChH--HHHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 022900          185 YHLACPASPVHYKF----------------NPV--KTIKTNVVGTLNMLGLAKRVGA-RFLLT  228 (290)
Q Consensus       185 ih~Ag~~~~~~~~~----------------~~~--~~~~~Nv~gt~~ll~a~~~~~~-riV~v  228 (290)
                      |+.|+....+.+..                .+.  ....-|+.-...+++.+++... -++++
T Consensus        82 v~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~  144 (169)
T d1s6ya1          82 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLIN  144 (169)
T ss_dssp             EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEE
Confidence            99998642211100                011  1234577777888888887764 34444

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.58  E-value=0.14  Score=38.40  Aligned_cols=34  Identities=26%  Similarity=0.532  Sum_probs=28.4

Q ss_pred             CCEEEEE-cCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVT-GGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVT-GasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ++.++|. .+.||||.+++..|+++|.+|+++.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~   73 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV   73 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Confidence            3456665 357999999999999999999999875

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.11  E-value=0.054  Score=41.08  Aligned_cols=33  Identities=18%  Similarity=0.367  Sum_probs=29.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      |+|.+.| +|-+|.++++.|.+.|++|++.+|+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~   33 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSL   33 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChH
Confidence            5688887 99999999999999999999998754

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.86  E-value=0.19  Score=38.80  Aligned_cols=74  Identities=18%  Similarity=0.175  Sum_probs=41.2

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHC-----CCeEEEEeCCCCCchh---hhhccc--CCCCeEEEEcccccccccCCCEEE
Q 022900          117 LRIVVTGGAGFVGSH-LVDRLIAR-----GDSVIVVDNFFTGRKE---NVMHHF--GNPNFELIRHDVVEPLLLEVDQIY  185 (290)
Q Consensus       117 k~VlVTGasG~IG~~-la~~L~~~-----G~~V~~~~r~~~~~~~---~~~~~~--~~~~v~~~~~D~~~~~~~~vD~vi  185 (290)
                      .+|.|.||.+ +|.. ++..++.+     +.+++++|.+.++.+.   .+....  ......+....-..+.+.+.|+||
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv   82 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM   82 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence            4788889744 4433 44444442     2378999875433321   111111  123344443333456678999999


Q ss_pred             EcccCC
Q 022900          186 HLACPA  191 (290)
Q Consensus       186 h~Ag~~  191 (290)
                      ..||..
T Consensus        83 itag~~   88 (167)
T d1u8xx1          83 AHIRVG   88 (167)
T ss_dssp             ECCCTT
T ss_pred             ECCCcC
Confidence            999863

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=90.59  E-value=0.46  Score=35.98  Aligned_cols=68  Identities=10%  Similarity=0.166  Sum_probs=36.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH-C-CCeEEEE-eCCCCCchhhhhcccCCCCeEEEEc--c-c-ccccccCCCEEEEc
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIA-R-GDSVIVV-DNFFTGRKENVMHHFGNPNFELIRH--D-V-VEPLLLEVDQIYHL  187 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~-~-G~~V~~~-~r~~~~~~~~~~~~~~~~~v~~~~~--D-~-~~~~~~~vD~vih~  187 (290)
                      ..+|.|.| +|+||..+...+++ . ..+++++ +|+.........+.   ..+.....  | + .+..+.++|+||.+
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~---~~i~~~~~~~d~l~~~~~~~~iDiVf~A   78 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR---MGVTTTYAGVEGLIKLPEFADIDFVFDA   78 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH---TTCCEESSHHHHHHHSGGGGGEEEEEEC
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh---cCCcccccceeeeeecccccccCEEEEc
Confidence            45899999 99999875544444 3 3367666 44433322222111   12222221  2 1 12345679999975

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.51  E-value=0.11  Score=34.91  Aligned_cols=33  Identities=24%  Similarity=0.116  Sum_probs=29.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +|+|.|.| +|.+|+-++.+..+.|.+|++++-.
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~   33 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLD   33 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTT
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCC
Confidence            47899999 8999999999999999999999753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.50  E-value=0.12  Score=42.21  Aligned_cols=31  Identities=32%  Similarity=0.536  Sum_probs=28.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      -|+|.| +|..|..+|.+|+++|.+|+++++.
T Consensus         5 DvvIIG-aGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            489998 7999999999999999999999875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.37  E-value=0.65  Score=34.38  Aligned_cols=85  Identities=15%  Similarity=0.199  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCC---chHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccccccCCCEEEEcccCC
Q 022900          115 KGLRIVVTGGA---GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (290)
Q Consensus       115 ~~k~VlVTGas---G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag~~  191 (290)
                      +.|+|.|.|+|   +-.|..+++.|.+.|++|+.+.-    ....+.+.      .+ -.++.+ .-..+|.++-+..  
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP----~~~~i~G~------~~-~~sl~d-lp~~iD~v~i~vp--   83 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP----KYEEVLGR------KC-YPSVLD-IPDKIEVVDLFVK--   83 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT----TCSEETTE------EC-BSSGGG-CSSCCSEEEECSC--
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECC----cccccCCC------cc-cccccc-cCccceEEEEEeC--
Confidence            45799999998   78999999999999999988842    11111111      11 112222 2235788775432  


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Q 022900          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (290)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~riV~vS  229 (290)
                                      -..+..+++.|.+.|.+.+++.
T Consensus        84 ----------------~~~~~~~~~e~~~~g~k~v~~~  105 (139)
T d2d59a1          84 ----------------PKLTMEYVEQAIKKGAKVVWFQ  105 (139)
T ss_dssp             ----------------HHHHHHHHHHHHHHTCSEEEEC
T ss_pred             ----------------HHHHHHHHHHHHHhCCCEEEEe
Confidence                            2235567788888887666653

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.17  E-value=0.48  Score=33.57  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=27.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH---CCCeEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~  150 (290)
                      ++++|.| .|++|-+++..|.+   .|.+|+++.|..
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            6899999 79999999976654   488999998763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.14  E-value=0.22  Score=40.44  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +.++|+|.| +|.-|...|..|.++|++|+++...
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            345799999 8999999999999999999999653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.64  E-value=0.51  Score=33.60  Aligned_cols=35  Identities=26%  Similarity=0.410  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      ...+|.|.| +|.+|+-++....+.|++|+++|.+.
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~   44 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYA   44 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESST
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            456899999 89999999999999999999998653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.30  E-value=0.25  Score=40.45  Aligned_cols=35  Identities=29%  Similarity=0.385  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      .+++++|.|-| .|-+|.++++.|.+.|++|++++.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            36889999998 999999999999999999998864

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.18  E-value=0.17  Score=41.92  Aligned_cols=31  Identities=48%  Similarity=0.814  Sum_probs=28.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      +|+|.| +|-+|.++|.+|+++|. +|+++++.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            599999 79999999999999996 69999886

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.16  E-value=0.3  Score=41.11  Aligned_cols=35  Identities=26%  Similarity=0.268  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      .+++++|.|-| .|-+|.++++.|.+.|++|++++.
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            37889999999 899999999999999999998854

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.12  E-value=0.15  Score=42.77  Aligned_cols=33  Identities=18%  Similarity=0.388  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      |..|+|.| +|.-|..+|..|+++|++|.++.++
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECC
Confidence            34699999 8999999999999999999999764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.94  E-value=0.23  Score=37.60  Aligned_cols=33  Identities=21%  Similarity=0.188  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      .+++|+|.| +|++|-.++..|.+.|.+|.++.+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEe
Confidence            356899999 899999999999999987655533

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.85  E-value=0.23  Score=37.61  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=27.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEe
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVD  147 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~  147 (290)
                      ||+|.|.|+||.||...+.-+.+.  .++|.++.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Ls   34 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALV   34 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEE
Confidence            578999999999999999999886  35787774

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=88.44  E-value=0.84  Score=35.46  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=31.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCc
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  153 (290)
                      -+|+|.| .|-.|..-++.....|+.|.++|.+..+.
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~   65 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATK   65 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence            4899999 79999999999999999999999875443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.35  E-value=0.24  Score=37.44  Aligned_cols=32  Identities=22%  Similarity=0.319  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEe
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVD  147 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~  147 (290)
                      +|+|.|.|+||.||...+.-+.+.  .++|+++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~ls   35 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALT   35 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEE
Confidence            479999999999999999999875  46888774

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=88.35  E-value=0.26  Score=37.52  Aligned_cols=36  Identities=31%  Similarity=0.228  Sum_probs=26.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      ..+.+|+|.|+ |.+|...+..+...|. .|++++++.
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~   63 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP   63 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchH
Confidence            45678999985 6677777777777766 688887643

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.24  E-value=0.18  Score=41.39  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=28.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +|+|.| +|-.|..++..|.++|.+|+++++.
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~   34 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQ   34 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            599999 6799999999999999999999875

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.11  E-value=2.1  Score=30.34  Aligned_cols=31  Identities=23%  Similarity=0.471  Sum_probs=27.8

Q ss_pred             CEEEEEcCC---chHHHHHHHHHHHCCCeEEEEe
Q 022900          117 LRIVVTGGA---GFVGSHLVDRLIARGDSVIVVD  147 (290)
Q Consensus       117 k~VlVTGas---G~IG~~la~~L~~~G~~V~~~~  147 (290)
                      |+|.|.|+|   +-.|..+++.|.+.|++|+.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            589999987   6789999999999999998874

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=88.06  E-value=0.97  Score=34.61  Aligned_cols=31  Identities=29%  Similarity=0.456  Sum_probs=25.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEe
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~  147 (290)
                      |++|.|-| -|-||+.+++.+.+++. +|+++.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaIn   32 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVS   32 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEe
Confidence            56899998 89999999999988864 666654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.03  E-value=0.26  Score=40.63  Aligned_cols=35  Identities=17%  Similarity=0.273  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      .+++++|.|-| .|-+|.++++.|.+.|++|++++.
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            36889999999 899999999999999999998753

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.99  E-value=0.34  Score=40.81  Aligned_cols=35  Identities=26%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CeEEEEeCCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFF  150 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~  150 (290)
                      .+|+|+|.| +|.-|...+..|+++|  ++|+++.|..
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            568999999 7999999999999876  5999998863

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.96  E-value=0.36  Score=36.23  Aligned_cols=34  Identities=29%  Similarity=0.279  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       115 ~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      .+.+|+|.| +|.||...+..+...|++|++++++
T Consensus        27 ~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~   60 (168)
T d1rjwa2          27 PGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIG   60 (168)
T ss_dssp             TTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCEEEEee-cccchhhhhHHHhcCCCeEeccCCC
Confidence            467899987 5999999888888889999999764

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.84  E-value=0.075  Score=42.05  Aligned_cols=35  Identities=31%  Similarity=0.273  Sum_probs=27.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      ..+.+|+|.|+ |.+|...+..+...|. +|++++.+
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~   59 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN   59 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc
Confidence            45679999985 9999887777777777 78888754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.75  E-value=0.77  Score=37.24  Aligned_cols=34  Identities=29%  Similarity=0.416  Sum_probs=29.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEeC
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN  148 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~-G~~V~~~~r  148 (290)
                      +++++|.|-| .|-+|.++++.|.++ |.+|+.+..
T Consensus        30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence            6889999999 799999999999864 999988854

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=87.61  E-value=0.26  Score=41.93  Aligned_cols=30  Identities=23%  Similarity=0.312  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      -|+|.| +|+-|..+|.+|++.|++|+++.+
T Consensus         4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             eEEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            388998 999999999999999999999987

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.30  E-value=0.37  Score=40.41  Aligned_cols=32  Identities=19%  Similarity=0.256  Sum_probs=27.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +++=--.||-.|.+|++++..+|+.|+++.+.
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            45555578999999999999999999999764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.22  E-value=0.045  Score=43.65  Aligned_cols=26  Identities=38%  Similarity=0.511  Sum_probs=23.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeE
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGDSV  143 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~~V  143 (290)
                      |+|+|.| +|-+|...|.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            5799999 8999999999999999754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.87  E-value=0.31  Score=37.88  Aligned_cols=31  Identities=29%  Similarity=0.579  Sum_probs=27.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  149 (290)
                      +|+|.| +|.-|...|..|.++|. +|+++.+.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECC
Confidence            599999 79999999999999996 69999764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=86.52  E-value=1  Score=34.72  Aligned_cols=31  Identities=23%  Similarity=0.467  Sum_probs=25.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CeEEEEeC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDN  148 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G-~~V~~~~r  148 (290)
                      -+|.|-| .|-||+.+++.+.+++ .+|+++..
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            4789998 8999999999999875 47777743

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=86.36  E-value=0.57  Score=33.26  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=26.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH---CCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~  150 (290)
                      .++++|.| +|++|-+++..|.+   +|.+|+++.+..
T Consensus        20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            36899999 59999999966554   456899998753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.07  E-value=0.41  Score=39.41  Aligned_cols=30  Identities=30%  Similarity=0.456  Sum_probs=27.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       119 VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      |+|.| +|.-|...|..|.++|++|+++.+.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence            78898 8999999999999999999999864

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=85.66  E-value=0.31  Score=39.85  Aligned_cols=37  Identities=24%  Similarity=0.199  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHH-----HHHHHHCCCeEEEEeCCC
Q 022900          114 RKGLRIVVTGGAGFVGSHL-----VDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~l-----a~~L~~~G~~V~~~~r~~  150 (290)
                      ..+++|+|+.|-||+|+..     +..|+++|++|.++|-..
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp   58 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP   58 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4667888888899999765     788999999999998764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.25  E-value=0.61  Score=37.20  Aligned_cols=33  Identities=24%  Similarity=0.324  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  150 (290)
                      .+|+|.| +|.-|..++..|.+.|. .|+++.+..
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4799999 79999999999999994 899998753

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.85  E-value=0.5  Score=36.44  Aligned_cols=32  Identities=16%  Similarity=0.304  Sum_probs=27.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCeEEEEeCC
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF  149 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~--G~~V~~~~r~  149 (290)
                      |+|+|.| +|++|-.++..|.+.  +.+|++++|.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            5799999 789999999999886  4588888875

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.71  E-value=2  Score=32.73  Aligned_cols=30  Identities=20%  Similarity=0.432  Sum_probs=24.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-eEEEEe
Q 022900          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (290)
Q Consensus       117 k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~  147 (290)
                      ++|.|-| -|-||+.+++.+.++.. +|+.+.
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaIN   33 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGIT   33 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEE
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEe
Confidence            5899999 79999999999988754 666654

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.63  E-value=0.74  Score=37.58  Aligned_cols=73  Identities=22%  Similarity=0.304  Sum_probs=49.9

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCc---hhhhhcccCCCCeEEEEccccccccc-CCCEEEEc
Q 022900          114 RKGLRIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGR---KENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~~-~vD~vih~  187 (290)
                      ..|++|+=.| |+|++..++++.+...| +|++++++....   .+++.......++++...|+.+.... .+|.|+..
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~~g-~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~~~~fD~V~ld  161 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIAD  161 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEEC
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccccceeeeeeec
Confidence            4578999999 57888888888775544 899998753222   22222323456899999999876433 48988864

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.35  E-value=0.45  Score=37.66  Aligned_cols=75  Identities=9%  Similarity=0.045  Sum_probs=51.2

Q ss_pred             CCCEEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCc---hhhhhcccCCCCeEEEEcccccccccCCCEEEEccc
Q 022900          115 KGLRIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGR---KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (290)
Q Consensus       115 ~~k~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~~~vD~vih~Ag  189 (290)
                      .+.+|+=.| |+|.+...|++.+...|.+|+++|.+..-.   ++.+........+++...|..+....+.|+++.+.+
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~  117 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFT  117 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESC
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeee
Confidence            456899999 577777778776666789999998653211   112222223457888888988877777888776544

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=84.16  E-value=0.38  Score=38.57  Aligned_cols=73  Identities=12%  Similarity=-0.132  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcc-cCCCCeEEEEccccccccc-CCCEEEEccc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPLLL-EVDQIYHLAC  189 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~-~vD~vih~Ag  189 (290)
                      .+.++||=.|+..|.   ++..|+++|.+|+++|.+..-........ ....+++++.+|+.+..+. .+|+|++..+
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~~~~fD~i~~~~~  110 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLD  110 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTT
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcccccccccceeee
Confidence            345789999954332   55677788999999986432111111111 1234789999999877654 5899997543

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=83.88  E-value=0.48  Score=40.23  Aligned_cols=30  Identities=27%  Similarity=0.392  Sum_probs=27.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      -|+|.| +|+-|..+|.+|++.|.+|+++.+
T Consensus         9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1           9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence            489999 899999999999999999999976

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.77  E-value=0.6  Score=34.66  Aligned_cols=30  Identities=30%  Similarity=0.438  Sum_probs=25.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      +|+|.| +|++|-+++..|. ++.+|+++++.
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKE   31 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEecc
Confidence            789999 7899999999885 57799999874

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=83.67  E-value=0.55  Score=39.39  Aligned_cols=30  Identities=27%  Similarity=0.519  Sum_probs=27.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r  148 (290)
                      -|+|.| +|.-|..+|.+|++.|++|+++.+
T Consensus         6 DviIVG-sG~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           6 DVVIVG-SGPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cEEEEC-cCHHHHHHHHHHhhCCCeEEEEec
Confidence            489999 899999999999999999999975

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.32  E-value=0.74  Score=33.62  Aligned_cols=33  Identities=33%  Similarity=0.353  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH----CCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIA----RGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~----~G~~V~~~~r~  149 (290)
                      .++++|.| +|++|-.++..|.+    .|.+|+++.+.
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~   73 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPE   73 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence            56899998 69999999998863    58899999775

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.07  E-value=0.66  Score=36.74  Aligned_cols=32  Identities=22%  Similarity=0.288  Sum_probs=28.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  150 (290)
                      .|+|.| +|-.|...+..|+++|.+|+++++..
T Consensus         4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            489999 78999999999999999999998754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.06  E-value=0.67  Score=38.69  Aligned_cols=33  Identities=36%  Similarity=0.525  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      ...|+|.| +|..|-.++..|.++|.+|+++++.
T Consensus         7 ~~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           7 EVDVLVVG-AGFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcC
Confidence            34799999 7999999999999999999999764

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=82.92  E-value=1.1  Score=35.85  Aligned_cols=73  Identities=21%  Similarity=0.125  Sum_probs=45.1

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhcccCCCCeEEEEcccccc--cccCCCEEEEcccC
Q 022900          114 RKGLRIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--LLLEVDQIYHLACP  190 (290)
Q Consensus       114 ~~~k~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~vD~vih~Ag~  190 (290)
                      ..+.+||-.| |+|++-. +   |++.+.+|+.+++................++.++.+|..+.  ....+|.||.+|+.
T Consensus        69 ~~g~~VLdIG~GsGy~ta-~---La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_          69 HKGQKVLEIGTGIGYYTA-L---IAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATA  144 (224)
T ss_dssp             CTTCEEEEECCTTSHHHH-H---HHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred             cccceEEEecCCCCHHHH-H---HHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHHHHhhcch
Confidence            3567899999 4565533 3   33345789999865322221111122346899999998653  33458999988774

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.68  E-value=1.3  Score=35.28  Aligned_cols=77  Identities=17%  Similarity=0.245  Sum_probs=50.7

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCC----CeEEEEeCCCCCc---hhhhhc----ccCCCCeEEEEccccccc--cc
Q 022900          114 RKGLRIVVTG-GAGFVGSHLVDRLIARG----DSVIVVDNFFTGR---KENVMH----HFGNPNFELIRHDVVEPL--LL  179 (290)
Q Consensus       114 ~~~k~VlVTG-asG~IG~~la~~L~~~G----~~V~~~~r~~~~~---~~~~~~----~~~~~~v~~~~~D~~~~~--~~  179 (290)
                      .++.+|+..| |||+.-..+++.+...|    .+|+.+++..+-.   .+.+..    ..+..++.++.+|..+..  ..
T Consensus        79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~~~  158 (223)
T d1r18a_          79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNA  158 (223)
T ss_dssp             CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGC
T ss_pred             CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccccccc
Confidence            3567999999 57888777777777666    3899998643211   111111    112357899999987643  34


Q ss_pred             CCCEEEEcccC
Q 022900          180 EVDQIYHLACP  190 (290)
Q Consensus       180 ~vD~vih~Ag~  190 (290)
                      .+|.|+-.++.
T Consensus       159 ~fD~Iiv~~a~  169 (223)
T d1r18a_         159 PYNAIHVGAAA  169 (223)
T ss_dssp             SEEEEEECSCB
T ss_pred             ceeeEEEEeec
Confidence            68999988875

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=82.37  E-value=0.37  Score=37.34  Aligned_cols=31  Identities=29%  Similarity=0.227  Sum_probs=25.8

Q ss_pred             CEEEEEcCCchHHH-----HHHHHHHHCCCeEEEEe
Q 022900          117 LRIVVTGGAGFVGS-----HLVDRLIARGDSVIVVD  147 (290)
Q Consensus       117 k~VlVTGasG~IG~-----~la~~L~~~G~~V~~~~  147 (290)
                      |+++|||-..++|+     .|+..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            68999995448885     67888999999999986

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.14  E-value=0.66  Score=38.18  Aligned_cols=31  Identities=26%  Similarity=0.359  Sum_probs=28.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEeCC
Q 022900          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       118 ~VlVTGasG~IG~~la~~L~~~G~~V~~~~r~  149 (290)
                      -|+|.| +|..|...+.+|+++|.+|+++++.
T Consensus        18 DVlVIG-~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVG-SGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEecC
Confidence            499999 8999999999999999999999864

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.74  E-value=0.43  Score=37.57  Aligned_cols=34  Identities=32%  Similarity=0.324  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCchHHH-----HHHHHHHHCCCeEEEEeCC
Q 022900          116 GLRIVVTGGAGFVGS-----HLVDRLIARGDSVIVVDNF  149 (290)
Q Consensus       116 ~k~VlVTGasG~IG~-----~la~~L~~~G~~V~~~~r~  149 (290)
                      ||.|.|+++-|++|+     +|+..|+++|.+|.++|-+
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578999999999885     5677888999999999754

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.56  E-value=1.3  Score=36.86  Aligned_cols=71  Identities=20%  Similarity=0.070  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch--hhhhcccCCCCeEEEEcccccccc--cCCCEEEEc
Q 022900          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~--~~vD~vih~  187 (290)
                      .++++|+-.|+..|+   ++..+++.|+ +|++++.+.....  ..........++.++.+|+.+-..  ..+|+|+..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~D~Ivse  109 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISE  109 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEEC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCccccceEEEEe
Confidence            468899999954332   3455667786 7999987532111  111111134579999999887654  468999964

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.45  E-value=0.42  Score=38.89  Aligned_cols=34  Identities=26%  Similarity=0.352  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCchHHH-----HHHHHHHHCCCeEEEEeCCC
Q 022900          116 GLRIVVTGGAGFVGS-----HLVDRLIARGDSVIVVDNFF  150 (290)
Q Consensus       116 ~k~VlVTGasG~IG~-----~la~~L~~~G~~V~~~~r~~  150 (290)
                      ||+|.|+| -||+|+     .|+..|+++|++|.++|-..
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            57899998 888886     45668899999999998754

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=80.62  E-value=1.2  Score=36.76  Aligned_cols=72  Identities=21%  Similarity=0.217  Sum_probs=48.6

Q ss_pred             CCEEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCc---hhhhhcccCCCCeEEEEccccccccc-CCCEEEEcccC
Q 022900          116 GLRIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGR---KENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHLACP  190 (290)
Q Consensus       116 ~k~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~~-~vD~vih~Ag~  190 (290)
                      +.+|+=.| |||-||-.++..+  ...+|+++|.+....   +++.... +-.+++++..|+.+.... ++|+||.|--+
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~-~~~~v~~~~~d~~~~~~~~~fDlIvsNPPY  185 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHL-AIKNIHILQSDWFSALAGQQFAMIVSNPPY  185 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHH-TCCSEEEECCSTTGGGTTCCEEEEEECCCC
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHh-CcccceeeecccccccCCCceeEEEecchh
Confidence            34677666 7888888887654  356999998753222   1222222 335799999999887654 69999998543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.50  E-value=1.9  Score=33.78  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=46.6

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCCCeEEEEeCCCCCc---hhhhhcccCCCCeEEEEcccccccc--cCCCEEEEc
Q 022900          114 RKGLRIVVTG-GAGFVGSHLVDRLIARGDSVIVVDNFFTGR---KENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHL  187 (290)
Q Consensus       114 ~~~k~VlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~--~~vD~vih~  187 (290)
                      .++.+|+-.| |+|+....+++.+ ..+.+|++++.+....   ++.+. .....++.++.+|..+...  ..+|.|+.+
T Consensus        74 ~~g~~VLdiG~GtG~~s~~la~~~-~~~g~V~~id~~~~~~~~a~~~~~-~~~~~n~~~~~~d~~~~~~~~~~fD~I~~~  151 (213)
T d1dl5a1          74 DKGMRVLEIGGGTGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVE-RLGIENVIFVCGDGYYGVPEFSPYDVIFVT  151 (213)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred             cccceEEEecCccchhHHHHHHHh-CCCCcEEEeecchhhHHHhhhhHh-hhcccccccccCchHHccccccchhhhhhh
Confidence            3567999888 4666666555544 3445899998753211   11111 1234578888888766433  458999988


Q ss_pred             ccC
Q 022900          188 ACP  190 (290)
Q Consensus       188 Ag~  190 (290)
                      ++.
T Consensus       152 ~~~  154 (213)
T d1dl5a1         152 VGV  154 (213)
T ss_dssp             SBB
T ss_pred             ccH
Confidence            874

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.39  E-value=1.1  Score=36.19  Aligned_cols=35  Identities=26%  Similarity=0.344  Sum_probs=30.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH-CCCeEEEEeC
Q 022900          113 KRKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDN  148 (290)
Q Consensus       113 ~~~~k~VlVTGasG~IG~~la~~L~~-~G~~V~~~~r  148 (290)
                      ..++++|.|-| .|-+|.++++.|.+ .|++|+.++.
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            36789999998 99999999999975 5999998853