Citrus Sinensis ID: 022932

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
MAMRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
ccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHHHccc
cHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcEcEcccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHcccHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccc
mamrrgvslRCCCLFLFLLLIENAHGNPNYREALAKSLLFfqgqrsgrlpkdqqitwrsnsglsdglfahvdltggyydagdnvkfnfpmAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKcatatpgklyvgvgdpnadhkcwerpedmdtvRSVYSVsasnpgsdvaGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGaysdslgsavcpfycsysgykdeLLWGAAWLFRATNDVTYYNFIKsvgddggtdvfswdNKFAGAHVLLARLY
MAMRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
MAMRRGVSlrccclflflllIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETaaalaaaSLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
******VSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQR*******QQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWE**************************TAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLAR**
*****GV*LRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
********LRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
MAMRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAMRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLARLY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query290 2.2.26 [Sep-21-2011]
Q2V4L8 484 Endoglucanase 3 OS=Arabid yes no 0.948 0.568 0.805 1e-123
Q9C9H5 484 Endoglucanase 9 OS=Arabid no no 0.948 0.568 0.778 1e-122
Q7XTH4 500 Endoglucanase 11 OS=Oryza yes no 0.906 0.526 0.678 2e-94
Q6YXT7 523 Endoglucanase 19 OS=Oryza no no 0.889 0.493 0.635 4e-94
Q9SRX3 501 Endoglucanase 1 OS=Arabid no no 0.972 0.562 0.602 1e-92
P05522 494 Endoglucanase 1 OS=Persea N/A no 0.896 0.526 0.643 2e-92
O81416 516 Endoglucanase 17 OS=Arabi no no 0.9 0.505 0.642 6e-92
Q93YQ7 497 Endoglucanase 24 OS=Arabi no no 0.896 0.523 0.588 1e-90
Q9CAC1 492 Endoglucanase 8 OS=Arabid no no 0.893 0.526 0.628 7e-90
Q8LQ92 499 Endoglucanase 3 OS=Oryza no no 0.968 0.563 0.592 1e-89
>sp|Q2V4L8|GUN3_ARATH Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2 Back     alignment and function desciption
 Score =  440 bits (1132), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/278 (80%), Positives = 248/278 (89%), Gaps = 3/278 (1%)

Query: 14  LFLFLLL---IENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAH 70
            F+FLL    +EN + +PNYREAL+KSLLFFQGQRSGRLP DQQ++WRS+SGLSDG  AH
Sbjct: 6   FFVFLLSALSLENTYASPNYREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAH 65

Query: 71  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCA 130
           VDLTGGYYDAGDNVKFNFPMAFTTTMLSWS+LEYGKKMGPELQN+R AIRWATDYLLKCA
Sbjct: 66  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGPELQNSRVAIRWATDYLLKCA 125

Query: 131 TATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190
            ATPGKLYVGVGDPN DHKCWERPEDMDT R+VYSVS SNPGSDVA ETAAALAA+S+VF
Sbjct: 126 RATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAASSMVF 185

Query: 191 RKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFR 250
           RK DP+Y+ LLL TAK V+QFA+QYRGAYS+SL S+VCPFYCSYSGYKDELLWGAAWL R
Sbjct: 186 RKVDPKYSRLLLATAKKVMQFAIQYRGAYSNSLSSSVCPFYCSYSGYKDELLWGAAWLHR 245

Query: 251 ATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLAR 288
           ATND  Y NFIKS+G     D+FSWDNK+AGA+VLL+R
Sbjct: 246 ATNDPYYTNFIKSLGGGDQPDIFSWDNKYAGAYVLLSR 283
May be involved in the sloughing (cell-cell separation) of the root cap cells from root tip.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q9C9H5|GUN9_ARATH Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1 Back     alignment and function description
>sp|Q7XTH4|GUN11_ORYSJ Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=3 Back     alignment and function description
>sp|Q6YXT7|GUN19_ORYSJ Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q93YQ7|GUN24_ARATH Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1 Back     alignment and function description
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
2290683 488 basic cellulase [Citrus sinensis] 0.986 0.586 1.0 1e-168
224127722 481 predicted protein [Populus trichocarpa] 0.982 0.592 0.811 1e-130
50346664 486 Cel9B [Populus tremula x Populus tremulo 0.982 0.586 0.811 1e-129
33943180 497 endo-1,4-beta-glucanase [Malus x domesti 0.982 0.573 0.771 1e-126
359493565 494 PREDICTED: endoglucanase 9-like [Vitis v 0.993 0.582 0.763 1e-125
357456091 484 Endoglucanase [Medicago truncatula] gi|3 0.920 0.551 0.816 1e-123
728483 486 endo-1,4-beta-glucanase [Pisum sativum] 0.965 0.576 0.750 1e-121
15219963 484 endoglucanase 3 [Arabidopsis thaliana] g 0.948 0.568 0.805 1e-121
15217446 484 endoglucanase 9 [Arabidopsis thaliana] g 0.948 0.568 0.778 1e-121
21554174 484 putative beta-glucanase [Arabidopsis tha 0.948 0.568 0.775 1e-120
>gi|2290683|gb|AAB65156.1| basic cellulase [Citrus sinensis] Back     alignment and taxonomy information
 Score =  595 bits (1534), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 286/286 (100%), Positives = 286/286 (100%)

Query: 3   MRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSG 62
           MRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSG
Sbjct: 1   MRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSG 60

Query: 63  LSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWA 122
           LSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWA
Sbjct: 61  LSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWA 120

Query: 123 TDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAA 182
           TDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAA
Sbjct: 121 TDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAA 180

Query: 183 LAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELL 242
           LAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELL
Sbjct: 181 LAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELL 240

Query: 243 WGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLAR 288
           WGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLAR
Sbjct: 241 WGAAWLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLAR 286

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224127722|ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1| predicted protein [Populus trichocarpa] gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466635|gb|AEO97230.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|50346664|gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|33943180|gb|AAQ55294.1| endo-1,4-beta-glucanase [Malus x domestica] Back     alignment and taxonomy information
>gi|359493565|ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera] gi|297734804|emb|CBI17038.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357456091|ref|XP_003598326.1| Endoglucanase [Medicago truncatula] gi|355487374|gb|AES68577.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|728483|gb|AAA96135.1| endo-1,4-beta-glucanase [Pisum sativum] Back     alignment and taxonomy information
>gi|15219963|ref|NP_173701.1| endoglucanase 3 [Arabidopsis thaliana] gi|114149313|sp|Q2V4L8.2|GUN3_ARATH RecName: Full=Endoglucanase 3; AltName: Full=Cellulase 5; Short=AtCEL5; AltName: Full=Endo-1,4-beta glucanase 3; Flags: Precursor gi|2462836|gb|AAB72171.1| beta-glucanase [Arabidopsis thaliana] gi|332192178|gb|AEE30299.1| endoglucanase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15217446|ref|NP_177294.1| endoglucanase 9 [Arabidopsis thaliana] gi|75169715|sp|Q9C9H5.1|GUN9_ARATH RecName: Full=Endoglucanase 9; AltName: Full=Cellulase 3; Short=AtCEL3; AltName: Full=Endo-1,4-beta glucanase 9; Flags: Precursor gi|12323721|gb|AAG51817.1|AC016163_6 putative beta-glucanase; 74324-76084 [Arabidopsis thaliana] gi|111074386|gb|ABH04566.1| At1g71380 [Arabidopsis thaliana] gi|332197074|gb|AEE35195.1| endoglucanase 9 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21554174|gb|AAM63253.1| putative beta-glucanase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
TAIR|locus:2017704 484 CEL5 "cellulase 5" [Arabidopsi 0.924 0.553 0.798 4.7e-119
TAIR|locus:2825314 484 CEL3 "cellulase 3" [Arabidopsi 0.924 0.553 0.768 1.7e-114
TAIR|locus:2024670 501 CEL2 "cellulase 2" [Arabidopsi 0.9 0.520 0.635 4e-90
TAIR|locus:2137824 516 GH9B13 "glycosyl hydrolase 9B1 0.9 0.505 0.616 2.5e-88
TAIR|locus:2033600 492 GH9B1 "glycosyl hydrolase 9B1" 0.893 0.526 0.606 3e-85
TAIR|locus:2120242 497 GH9B18 "glycosyl hydrolase 9B1 0.896 0.523 0.569 3.1e-83
TAIR|locus:2028015 489 GH9B6 "glycosyl hydrolase 9B6" 0.896 0.531 0.588 8.2e-83
TAIR|locus:2128394 479 GH9B15 "glycosyl hydrolase 9B1 0.865 0.524 0.546 2.1e-75
TAIR|locus:2118519 478 GH9B14 "glycosyl hydrolase 9B1 0.872 0.529 0.541 9.3e-75
TAIR|locus:2120232 493 GH9B17 "glycosyl hydrolase 9B1 0.896 0.527 0.501 5.1e-74
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
 Identities = 214/268 (79%), Positives = 236/268 (88%)

Query:    21 IENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDA 80
             +EN + +PNYREAL+KSLLFFQGQRSGRLP DQQ++WRS+SGLSDG  AHVDLTGGYYDA
Sbjct:    16 LENTYASPNYREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHVDLTGGYYDA 75

Query:    81 GDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVG 140
             GDNVKFNFPMAFTTTMLSWS+LEYGKKMGPELQN+R AIRWATDYLLKCA ATPGKLYVG
Sbjct:    76 GDNVKFNFPMAFTTTMLSWSSLEYGKKMGPELQNSRVAIRWATDYLLKCARATPGKLYVG 135

Query:   141 VGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETXXXXXXXSLVFRKGDPRYASL 200
             VGDPN DHKCWERPEDMDT R+VYSVS SNPGSDVA ET       S+VFRK DP+Y+ L
Sbjct:   136 VGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAASSMVFRKVDPKYSRL 195

Query:   201 LLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNF 260
             LL TAK V+QFA+QYRGAYS+SL S+VCPFYCSYSGYKDELLWGAAWL RATND  Y NF
Sbjct:   196 LLATAKKVMQFAIQYRGAYSNSLSSSVCPFYCSYSGYKDELLWGAAWLHRATNDPYYTNF 255

Query:   261 IKSVGDDGGTDVFSWDNKFAGAHVLLAR 288
             IKS+G     D+FSWDNK+AGA+VLL+R
Sbjct:   256 IKSLGGGDQPDIFSWDNKYAGAYVLLSR 283
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120242 GH9B18 "glycosyl hydrolase 9B18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2V4L8GUN3_ARATH3, ., 2, ., 1, ., 40.80570.94820.5681yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
PLN02175 484 PLN02175, PLN02175, endoglucanase 1e-169
PLN02266 510 PLN02266, PLN02266, endoglucanase 1e-146
pfam00759 437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-145
PLN02308 492 PLN02308, PLN02308, endoglucanase 1e-131
PLN03009 495 PLN03009, PLN03009, cellulase 1e-127
PLN02613 498 PLN02613, PLN02613, endoglucanase 1e-122
PLN00119 489 PLN00119, PLN00119, endoglucanase 1e-115
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-111
PLN02909 486 PLN02909, PLN02909, Endoglucanase 1e-109
PLN02345 469 PLN02345, PLN02345, endoglucanase 1e-106
PLN02420 525 PLN02420, PLN02420, endoglucanase 1e-101
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-100
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information 
 Score =  476 bits (1226), Expect = e-169
 Identities = 220/278 (79%), Positives = 244/278 (87%), Gaps = 3/278 (1%)

Query: 14  LFLFL---LLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAH 70
            F+FL   LLIEN   NPNY+EAL+KSLLFFQGQRSG LP+ QQ++WR++SGLSDG  AH
Sbjct: 6   FFVFLFSSLLIENTDANPNYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAH 65

Query: 71  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCA 130
           VDLTGGYYDAGDNVKFNFPMAFTTTMLSWS LEYGK+MGPEL+NAR  IRWATDYLLKCA
Sbjct: 66  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSALEYGKRMGPELENARVNIRWATDYLLKCA 125

Query: 131 TATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190
            ATPGKLYVGVGDPN DHKCWERPEDMDT R+VYSVS SNPGSDVA ETAAALAAAS+VF
Sbjct: 126 RATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAAASMVF 185

Query: 191 RKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFR 250
           RK D +Y+ LLL TAK V+QFA+QYRGAYSDSL S+VCPFYCSYSGYKDEL+WGA+WL R
Sbjct: 186 RKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYKDELMWGASWLLR 245

Query: 251 ATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHVLLAR 288
           ATND  Y NFIKS+G     D+FSWDNK+AGA+VLL+R
Sbjct: 246 ATNDPYYANFIKSLGGGDQPDIFSWDNKYAGAYVLLSR 283

Length = 484
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 290
PLN02175 484 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN00119 489 endoglucanase 100.0
PLN02909 486 Endoglucanase 100.0
PLN02266 510 endoglucanase 100.0
PLN02420 525 endoglucanase 100.0
PLN02613 498 endoglucanase 100.0
PLN02308 492 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN03009 495 cellulase 100.0
PLN02345 469 endoglucanase 100.0
PF00759 444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249 384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.55
KOG2787403 consensus Lanthionine synthetase C-like protein 1 96.52
cd00249 384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.45
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 96.06
COG1331 667 Highly conserved protein containing a thioredoxin 95.7
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 95.15
PF07221 346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 92.93
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 92.71
COG2942 388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 86.39
TIGR03463634 osq_cycl 2,3-oxidosqualene cyclase. This model ide 84.53
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 83.87
>PLN02175 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=4.6e-81  Score=610.36  Aligned_cols=266  Identities=80%  Similarity=1.321  Sum_probs=250.5

Q ss_pred             ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHH
Q 022932           24 AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLE  103 (290)
Q Consensus        24 ~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e  103 (290)
                      -..+.+|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++|
T Consensus        19 ~~~~~~Y~~aL~kSl~Fy~aQrsG~Lp~~~r~~WRgds~l~Dg~~~~~DlsGGwyDAGD~vKf~~p~A~t~t~LaW~~~e   98 (484)
T PLN02175         19 TDANPNYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSALE   98 (484)
T ss_pred             ccccccHHHHHHHHHHHHHHhhCcCCCCcCCCCCccccccccCccCccCCCCCeeeCCCCCeeCchHHHHHHHHHhhhhh
Confidence            44568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHH
Q 022932          104 YGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL  183 (290)
Q Consensus       104 ~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAal  183 (290)
                      |++.+.++++++|+||||++|||||||+..+|.||+|||+++.||.+|++||+++.+|++|+|+.++|||++++++||||
T Consensus        99 ~~~~~~~~~~~~l~~lkw~~Dyllk~~~~~~g~vy~qVG~~~~Dh~~W~~PE~~~~~R~~~~is~~~PGSd~aae~AAAL  178 (484)
T PLN02175         99 YGKRMGPELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAAL  178 (484)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhCcCCCCCeEEEEeCCCCCCcccCCChhHccCccceEecCCCCCccHHHHHHHHHH
Confidence            99999888999999999999999999954389999999999999999999999999999999999999999999999999


Q ss_pred             HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932          184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS  263 (290)
Q Consensus       184 A~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~  263 (290)
                      |+||||||++||+||++||++||++|+||+++|+.|.++++...+++|++.+++.||++|||+|||+||||++|+++++.
T Consensus       179 AaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~~Y~s~s~y~DEl~WAAawLY~ATgd~~Yl~~~~~  258 (484)
T PLN02175        179 AAASMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYKDELMWGASWLLRATNDPYYANFIKS  258 (484)
T ss_pred             HHHHHHhcccCHHHHHHHHHHHHHHHHHHHhCCCCcccCccccccCccccCCCccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999999987655445789998788999999999999999999999999998


Q ss_pred             cCCCCCCCcccccchhHHHHHHhhcc
Q 022932          264 VGDDGGTDVFSWDNKFAGAHVLLARL  289 (290)
Q Consensus       264 ~~~~~~~~~~~Wd~~~~~~~~lla~~  289 (290)
                      ++.......|+||+|.++++|||+++
T Consensus       259 ~~~~~~~~~~~Wd~k~~g~~vLla~~  284 (484)
T PLN02175        259 LGGGDQPDIFSWDNKYAGAYVLLSRR  284 (484)
T ss_pred             cCCCCCCCccCCcCHHHHHHHHHHHh
Confidence            76544556899999999999999985

>PLN02340 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
1ks8_A 433 The Structure Of Endoglucanase From Termite, Nasuti 8e-63
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 1e-57
2xfg_A 466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-47
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 3e-46
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 3e-46
4dod_A 475 The Structure Of Cbescii Cela Gh9 Module Length = 4 2e-43
1ia6_A 441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 1e-28
2yik_A 611 Catalytic Domain Of Clostridium Thermocellum Celt L 6e-23
3ez8_A 537 Crystal Structure Of Endoglucanase Cel9a From The T 2e-05
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  236 bits (603), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 127/267 (47%), Positives = 169/267 (63%), Gaps = 9/267 (3%)
Query: 29  NYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNF 88
           +Y++ L  SLLF++ QRSGRLP DQ++TWR +S L+D      DLTGGY+DAGD VKF F
Sbjct: 4   DYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGF 63
Query: 89  PMAFTTTMLSWSTLEY--GKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNA 146
           PMA+T T+L+W  +++  G      L + R A++WATDY +K  T +  + Y  VG  +A
Sbjct: 64  PMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHT-SQNEFYGQVGQGDA 122
Query: 147 DHKCWERPEDMDTVRSVYSVSASNPGSDVAGETXXXXXXXSLVFRKGDPRYASLLLRTAK 206
           DH  W RPEDM   R  Y +  S PGSD+AGET       S+VFR  D  Y++ LL  A+
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182
Query: 207 NVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD 266
            +  FA  YRG YSDS+  A   FY S + Y+DEL+W AAWL+RATND TY N  +S+ D
Sbjct: 183 QLFDFANNYRGKYSDSITDARN-FYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240
Query: 267 DGGTDV----FSWDNKFAGAHVLLARL 289
           + G        +WD+K +G  VLLA+L
Sbjct: 241 EFGLQNWGGGLNWDSKVSGVQVLLAKL 267
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
1ks8_A 433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-106
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-103
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-101
2xfg_A 466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-100
1ia6_A 441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 8e-98
3gzk_A 537 Cellulase; fold from GH9 from CAZY database, glyco 6e-95
2yik_A 611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 8e-95
1clc_A 639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 6e-90
1ut9_A 609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 2e-76
3h7l_A 586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 1e-49
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  314 bits (805), Expect = e-106
 Identities = 133/267 (49%), Positives = 175/267 (65%), Gaps = 9/267 (3%)

Query: 29  NYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNF 88
           +Y++ L  SLLF++ QRSGRLP DQ++TWR +S L+D      DLTGGY+DAGD VKF F
Sbjct: 4   DYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGF 63

Query: 89  PMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNA 146
           PMA+T T+L+W  +++         L + R A++WATDY +K  T+   + Y  VG  +A
Sbjct: 64  PMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTS-QNEFYGQVGQGDA 122

Query: 147 DHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAK 206
           DH  W RPEDM   R  Y +  S PGSD+AGETAAALAAAS+VFR  D  Y++ LL  A+
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182

Query: 207 NVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD 266
            +  FA  YRG YSDS+  A   FY S + Y+DEL+W AAWL+RATND TY N  +S+ D
Sbjct: 183 QLFDFANNYRGKYSDSITDA-RNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240

Query: 267 DGGTD----VFSWDNKFAGAHVLLARL 289
           + G        +WD+K +G  VLLA+L
Sbjct: 241 EFGLQNWGGGLNWDSKVSGVQVLLAKL 267
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
1ks8_A 433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
2xfg_A 466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A 441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2yik_A 611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
1clc_A 639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A 537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A 609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A 586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 97.0
3gt5_A 402 N-acetylglucosamine 2-epimerase; structural genomi 96.89
2gz6_A 388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.22
2gz6_A 388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.89
1fp3_A 402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 95.17
3gt5_A 402 N-acetylglucosamine 2-epimerase; structural genomi 94.26
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 93.12
3k11_A445 Putative glycosyl hydrolase; structural genomics, 92.83
2ahf_A 377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 92.8
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 91.5
3k7x_A 349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 89.64
2zbl_A 421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 89.3
3pmm_A 382 Putative cytoplasmic protein; structural genomics, 84.36
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
Probab=100.00  E-value=9.6e-79  Score=591.73  Aligned_cols=260  Identities=50%  Similarity=0.893  Sum_probs=246.0

Q ss_pred             chhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHccc
Q 022932           27 NPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGK  106 (290)
Q Consensus        27 ~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~  106 (290)
                      .++|.++|++||+||++||||.+|++++++||++||+.||++.++||+|||||||||+||++|+++|+++|+|+++||++
T Consensus         2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~   81 (433)
T 1ks8_A            2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA   81 (433)
T ss_dssp             CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHH
Q 022932          107 KM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALA  184 (290)
Q Consensus       107 ~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA  184 (290)
                      .|  +|++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++++|++|+|+.++|||++++++|||||
T Consensus        82 ~~~~~~~~~d~ldeikwg~D~llk~~~~-~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA  160 (433)
T 1ks8_A           82 GYSSAGALDDGRKAVKWATDYFIKAHTS-QNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALA  160 (433)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHCCB-TTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred             hhhcCCchHHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHH
Confidence            99  899999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             HhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHc
Q 022932          185 AASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV  264 (290)
Q Consensus       185 ~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~  264 (290)
                      +||||||++||+||++||++||++|+||++||+.|.++++. .+++|+| +++.||++|||+|||++|||++|+++++++
T Consensus       161 ~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~-~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~  238 (433)
T 1ks8_A          161 AASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESL  238 (433)
T ss_dssp             HHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGG-GGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCc-CCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998766553 5789999 999999999999999999999999999884


Q ss_pred             ----CCCCCCCcccccchhHHHHHHhhcc
Q 022932          265 ----GDDGGTDVFSWDNKFAGAHVLLARL  289 (290)
Q Consensus       265 ----~~~~~~~~~~Wd~~~~~~~~lla~~  289 (290)
                          +.....+.|+||+|.++++++|+++
T Consensus       239 ~~~~~~~~~~~~~~Wd~~~~g~~~lla~~  267 (433)
T 1ks8_A          239 YDEFGLQNWGGGLNWDSKVSGVQVLLAKL  267 (433)
T ss_dssp             HHHTTGGGSCCCCCSSCCHHHHHHHHHHH
T ss_pred             HHhcCcCcCcCCcCccchhhHHHHHHhhc
Confidence                2223456899999999999999874
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 290
d1tf4a1 460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-104
d1ks8a_ 433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-102
d1g87a1 454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 4e-97
d1ia6a_ 431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 5e-93
d1clca1 441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 8e-68
d1ut9a1 511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-65
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  308 bits (791), Expect = e-104
 Identities = 126/273 (46%), Positives = 172/273 (63%), Gaps = 15/273 (5%)

Query: 29  NYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNF 88
           NY EAL KS+ F++ QRSG+LP++ +++WR +SGL+DG    +DLTGG+YDAGD+VKF F
Sbjct: 5   NYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGF 64

Query: 89  PMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNA 146
           PMAFT TML+W  +E  +      ++   +  +RW  DY +K    +P  LYV VGD +A
Sbjct: 65  PMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKA-HPSPNVLYVQVGDGDA 123

Query: 147 DHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAK 206
           DHK W   E M   R  + V  S PGSDVA ETAAA+AA+S+VF   DP YA+ L++ AK
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 207 NVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD 266
            +  FA  YRG YSD + +    FY S+SGY+DEL+WGA WL++AT D +Y    +   D
Sbjct: 184 QLYTFADTYRGVYSDCVPAG--AFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD 241

Query: 267 DGGTD----------VFSWDNKFAGAHVLLARL 289
              T+            +WD+K  G +VLLA+ 
Sbjct: 242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKE 274
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
d1ks8a_ 433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1 454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1tf4a1 460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_ 431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1 441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1 511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1fp3a_ 402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 94.89
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 94.47
d1fp3a_ 402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 93.46
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 90.18
d2afaa1 411 Putative NAG isomerase YihS {Salmonella typhimuriu 87.83
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 86.87
d2sqca1352 Squalene-hopene cyclase {Alicyclobacillus acidocal 80.51
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo-b-1,4-glucanase
species: Termite (Nasutitermes takasagoensis) [TaxId: 62960]

Probab=100.00  E-value=5.3e-73  Score=548.85  Aligned_cols=259  Identities=50%  Similarity=0.891  Sum_probs=244.4

Q ss_pred             chhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHccc
Q 022932           27 NPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGK  106 (290)
Q Consensus        27 ~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~  106 (290)
                      .++|.++|++||+||++||||.+|..++++||++||++||.+.++||+|||||||||+||++|+++++++|+|++++|++
T Consensus         2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~w~~~s~~~dg~~~~~DvsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~~~~~   81 (433)
T d1ks8a_           2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA   81 (433)
T ss_dssp             CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCCcccCCCccccCCCCCCCceeCCccceechhhHHHHHHHHHHHHHhHH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHH
Q 022932          107 KM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALA  184 (290)
Q Consensus       107 ~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA  184 (290)
                      .+  +|++||||||||||+|||||||++ +|.+|+|||++..||.+|++|++++.+|++|.++.++|+|++++++||+||
T Consensus        82 ~~~s~~~~~dlldE~kwg~D~llkmq~~-~g~~y~~V~~~~~d~~~~~~p~~~~~~r~~~~~~~~~~~t~~~~~~aAalA  160 (433)
T d1ks8a_          82 GYSSAGALDDGRKAVKWATDYFIKAHTS-QNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALA  160 (433)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHCCB-TTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred             hhccCCchHHHHHHHHHHHHHHHHcccC-CCCEEEEEecCCccCCCCCCccccCCCCceeeecCCCcchHHHHHHHHHHH
Confidence            99  999999999999999999999999 999999999998999999999999999999999999999999999999999


Q ss_pred             HhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHc
Q 022932          185 AASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV  264 (290)
Q Consensus       185 ~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~  264 (290)
                      +|||||+++||+||++||++||++|+|+++||+.|.++.+. .+++|++ +++.||++|||+|||++|||++|++++++.
T Consensus       161 ~as~v~~~~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~-~~~~Y~~-~~~~De~~wAAaeLy~aTg~~~Yl~~~~~~  238 (433)
T d1ks8a_         161 AASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESL  238 (433)
T ss_dssp             HHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGG-GGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHHHhcccCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC-CCCCccc-ccchhHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998765543 6789999 999999999999999999999999999874


Q ss_pred             ----CCCCCCCcccccchhHHHHHHhhc
Q 022932          265 ----GDDGGTDVFSWDNKFAGAHVLLAR  288 (290)
Q Consensus       265 ----~~~~~~~~~~Wd~~~~~~~~lla~  288 (290)
                          ........++|+++..+++++|++
T Consensus       239 ~~~~~~~~~~~~~~w~~~~~~~~~~la~  266 (433)
T d1ks8a_         239 YDEFGLQNWGGGLNWDSKVSGVQVLLAK  266 (433)
T ss_dssp             HHHTTGGGSCCCCCSSCCHHHHHHHHHH
T ss_pred             HHhcCcccCCccccchhHHHHHHHHHhh
Confidence                223345678999999999999886
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]} Back     information, alignment and structure