Citrus Sinensis ID: 022934

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
MVSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
ccEEcccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEEcccHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHcccccccccccHHHHHccccccc
ccHHHHccccccccccccccccccHcEEEEEEcccccccccccHHHHHcEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEEEcccccccccccEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHHccccc
mvsgqrigqseaplpylspelngqrlliganfasagigilndtgIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVggndfvnnyylvpysarsrqftlpNYVKYIISEYRKLLMRLYELGARRVlvtgtgplgcvpaelalrgsnggcsaELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTqqthmdfvsnpqaygfttakvaccgqgpnnglgLCTAlsnlcpnrqlyafwdpfhpsekaNRLIVEQIFSgstnymtpmnLSTVMALDSLTS
mvsgqrigqseaplpylSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVpysarsrqftlpNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGstnymtpmNLSTVmaldslts
MVSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
********************LNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNL***********
MVSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARS*QFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALD****
**********EAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
MVSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALD****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query290 2.2.26 [Sep-21-2011]
Q8LB81366 GDSL esterase/lipase At5g yes no 0.979 0.775 0.694 1e-121
Q5PNZ0362 GDSL esterase/lipase At5g no no 0.968 0.776 0.709 1e-117
Q9M8Y5366 GDSL esterase/lipase LTL1 no no 0.944 0.748 0.689 1e-114
Q9SVU5367 GDSL esterase/lipase At4g no no 0.968 0.765 0.654 1e-106
O80470387 GDSL esterase/lipase At2g no no 0.968 0.726 0.340 1e-49
O23470368 GDSL esterase/lipase At4g no no 0.948 0.747 0.363 1e-48
Q9M2R9374 GDSL esterase/lipase At3g no no 0.955 0.740 0.366 3e-48
Q9FHQ1356 GDSL esterase/lipase At5g no no 0.872 0.710 0.359 2e-45
Q9SF78384 GDSL esterase/lipase At1g no no 0.913 0.690 0.354 3e-43
Q8LFJ9364 GDSL esterase/lipase 7 OS no no 0.934 0.744 0.327 2e-41
>sp|Q8LB81|GDL79_ARATH GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1 Back     alignment and function desciption
 Score =  435 bits (1119), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 198/285 (69%), Positives = 245/285 (85%), Gaps = 1/285 (0%)

Query: 5   QRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQ 64
           + +GQ E+P+PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +QL+YF +Y+
Sbjct: 83  EHLGQ-ESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYK 141

Query: 65  RRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYR 124
            RVS ++G ++  +LVN ALVLIT+GGNDFVNNYYLVP+SARSRQF+LP+YV ++ISEYR
Sbjct: 142 VRVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYR 201

Query: 125 KLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGI 184
           K+L ++Y+LGARRVLVTGTGP+GCVPAELA R  NG C+ ELQRA SL+NPQL QM+  +
Sbjct: 202 KVLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDL 261

Query: 185 NRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQ 244
           N ++G + FIAANTQQ HMDF+S+PQAYGF T+KVACCGQGP NG+GLCT LSNLCPNR 
Sbjct: 262 NNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRD 321

Query: 245 LYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLT 289
           L+AFWDPFHPSEKA+R+I +QI +GS  YM PMNLST++ +DS+T
Sbjct: 322 LFAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTILTVDSMT 366

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q5PNZ0|GDL77_ARATH GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8Y5|LTL1_ARATH GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SVU5|GDL67_ARATH GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1 Back     alignment and function description
>sp|O80470|GDL38_ARATH GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1 Back     alignment and function description
>sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2 Back     alignment and function description
>sp|Q9M2R9|GDL58_ARATH GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1 Back     alignment and function description
>sp|Q9FHQ1|GDL80_ARATH GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
255562027369 zinc finger protein, putative [Ricinus c 0.979 0.769 0.825 1e-136
118488183368 unknown [Populus trichocarpa] 0.979 0.771 0.792 1e-135
224123622368 predicted protein [Populus trichocarpa] 0.979 0.771 0.789 1e-135
224144645364 predicted protein [Populus trichocarpa] 0.972 0.774 0.784 1e-132
356506018365 PREDICTED: GDSL esterase/lipase At5g3337 0.972 0.772 0.770 1e-129
356573163370 PREDICTED: GDSL esterase/lipase At5g3337 0.972 0.762 0.770 1e-128
225430643368 PREDICTED: GDSL esterase/lipase At5g3337 0.968 0.763 0.747 1e-127
147828545354 hypothetical protein VITISV_039098 [Viti 0.968 0.793 0.750 1e-127
356574859371 PREDICTED: GDSL esterase/lipase At5g3337 0.972 0.760 0.756 1e-127
296085159362 unnamed protein product [Vitis vinifera] 0.968 0.776 0.747 1e-127
>gi|255562027|ref|XP_002522022.1| zinc finger protein, putative [Ricinus communis] gi|223538826|gb|EEF40426.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/286 (82%), Positives = 260/286 (90%), Gaps = 2/286 (0%)

Query: 5   QRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQ 64
           +RIG SE  LPYLSPEL G+RLL GANFASAGIGILNDTG+QF+NIIRM+RQ  YF EYQ
Sbjct: 85  ERIG-SEPVLPYLSPELTGKRLLNGANFASAGIGILNDTGVQFLNIIRMYRQFQYFGEYQ 143

Query: 65  RRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYR 124
           RRV A+IG+ + ++LVN ALVLITVGGNDFVNNYYLVPYSARSRQF LP+YVKY+ISEY+
Sbjct: 144 RRVRALIGSSRTKRLVNGALVLITVGGNDFVNNYYLVPYSARSRQFALPDYVKYLISEYK 203

Query: 125 KLLMRLYELGARRVLVTGTGPLGCVPAELALRGS-NGGCSAELQRATSLYNPQLEQMLQG 183
           KLLM LY+LGARRVLVTGTGPLGCVPAELA+RG+ NGGCSAELQRA SLYNPQL QML G
Sbjct: 204 KLLMALYKLGARRVLVTGTGPLGCVPAELAMRGANNGGCSAELQRAASLYNPQLVQMLNG 263

Query: 184 INRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNR 243
           +NRKIG+TVFI ANTQQ HMDF+S+PQAYGFTT+KVACCGQGP NGLGLCT  SNLCPNR
Sbjct: 264 LNRKIGKTVFIGANTQQMHMDFISSPQAYGFTTSKVACCGQGPYNGLGLCTLASNLCPNR 323

Query: 244 QLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLT 289
            LYAFWDPFHPSEKANRLIVEQIFSG+TNYM PMNLST+MALD+ T
Sbjct: 324 GLYAFWDPFHPSEKANRLIVEQIFSGTTNYMVPMNLSTIMALDART 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118488183|gb|ABK95911.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224123622|ref|XP_002319125.1| predicted protein [Populus trichocarpa] gi|222857501|gb|EEE95048.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224144645|ref|XP_002325361.1| predicted protein [Populus trichocarpa] gi|222862236|gb|EEE99742.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356506018|ref|XP_003521785.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information
>gi|356573163|ref|XP_003554733.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information
>gi|225430643|ref|XP_002268826.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147828545|emb|CAN66351.1| hypothetical protein VITISV_039098 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574859|ref|XP_003555561.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information
>gi|296085159|emb|CBI28654.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
TAIR|locus:2145969366 AT5G33370 "AT5G33370" [Arabido 0.979 0.775 0.694 1.4e-110
TAIR|locus:2146223362 AT5G18430 "AT5G18430" [Arabido 0.968 0.776 0.709 3.9e-108
TAIR|locus:2103005366 LTL1 "AT3G04290" [Arabidopsis 0.982 0.778 0.667 9.5e-105
TAIR|locus:2117763367 AT4G28780 "AT4G28780" [Arabido 0.979 0.773 0.648 3.5e-98
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.958 0.718 0.348 6e-48
TAIR|locus:2074840374 AT3G50400 "AT3G50400" [Arabido 0.955 0.740 0.366 4.2e-47
TAIR|locus:2151744356 AT5G37690 [Arabidopsis thalian 0.903 0.735 0.354 3.1e-44
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.968 0.731 0.349 2.8e-43
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 0.962 0.745 0.308 5.2e-42
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.913 0.728 0.334 6.6e-42
TAIR|locus:2145969 AT5G33370 "AT5G33370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
 Identities = 198/285 (69%), Positives = 245/285 (85%)

Query:     5 QRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQ 64
             + +GQ E+P+PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +QL+YF +Y+
Sbjct:    83 EHLGQ-ESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYK 141

Query:    65 RRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYR 124
              RVS ++G ++  +LVN ALVLIT+GGNDFVNNYYLVP+SARSRQF+LP+YV ++ISEYR
Sbjct:   142 VRVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYR 201

Query:   125 KLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGI 184
             K+L ++Y+LGARRVLVTGTGP+GCVPAELA R  NG C+ ELQRA SL+NPQL QM+  +
Sbjct:   202 KVLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDL 261

Query:   185 NRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQ 244
             N ++G + FIAANTQQ HMDF+S+PQAYGF T+KVACCGQGP NG+GLCT LSNLCPNR 
Sbjct:   262 NNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRD 321

Query:   245 LYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLT 289
             L+AFWDPFHPSEKA+R+I +QI +GS  YM PMNLST++ +DS+T
Sbjct:   322 LFAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTILTVDSMT 366
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2146223 AT5G18430 "AT5G18430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103005 LTL1 "AT3G04290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117763 AT4G28780 "AT4G28780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074840 AT3G50400 "AT3G50400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151744 AT5G37690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LB81GDL79_ARATH3, ., 1, ., 1, ., -0.69470.97930.7759yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 3e-89
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 6e-53
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 8e-25
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 6e-14
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 4e-11
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 7e-11
cd01823259 cd01823, SEST_like, SEST_like 0.002
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  267 bits (686), Expect = 3e-89
 Identities = 97/260 (37%), Positives = 150/260 (57%), Gaps = 7/260 (2%)

Query: 13  PLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIG 72
             P           L G NFAS G GIL+ TG    ++I +  QL+YF EY+ R+ A++G
Sbjct: 61  LPPPYLSPNGSSDFLTGVNFASGGAGILDSTG-FLGSVISLSVQLEYFKEYKERLRALVG 119

Query: 73  AQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYE 132
            + A  +++++L LI++G ND++NNY+    +  +RQ+ +  YV +++S     + RLY+
Sbjct: 120 EEAAADILSKSLFLISIGSNDYLNNYF----ANPTRQYEVEAYVPFLVSNISSAIKRLYD 175

Query: 133 LGARRVLVTGTGPLGCVPAELALRGSN-GGCSAELQRATSLYNPQLEQMLQGINRKIGQT 191
           LGAR+ +V G GPLGC+P++  L G + GGC  EL     L+N +L+++L  + R++   
Sbjct: 176 LGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGA 235

Query: 192 VFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTAL-SNLCPNRQLYAFWD 250
            F+ A+     +D + NP  YGF     ACCG G   G  LC    S +CP+   Y FWD
Sbjct: 236 KFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWD 295

Query: 251 PFHPSEKANRLIVEQIFSGS 270
             HP+E ANR+I + + SG 
Sbjct: 296 GVHPTEAANRIIADALLSGP 315

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|238861 cd01823, SEST_like, SEST_like Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 290
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.9
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.04
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.02
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.02
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 98.96
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 98.94
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 98.93
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 98.92
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 98.91
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 98.86
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 98.81
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 98.8
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 98.8
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 98.74
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 98.72
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 98.71
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 98.7
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 98.7
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 98.68
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 98.68
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 98.64
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 98.61
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 98.61
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 98.6
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 98.46
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 98.44
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.34
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.3
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 98.22
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.01
COG2755216 TesA Lysophospholipase L1 and related esterases [A 97.41
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 96.97
KOG3670397 consensus Phospholipase [Lipid transport and metab 96.71
COG2845354 Uncharacterized protein conserved in bacteria [Fun 95.63
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 93.33
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 88.41
PLN02757154 sirohydrochlorine ferrochelatase 80.08
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2e-61  Score=442.88  Aligned_cols=266  Identities=32%  Similarity=0.649  Sum_probs=230.3

Q ss_pred             CccccccCC-CCCCCCCCCCCCCCCCCCCcceecccCcccccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChHHHHHh
Q 022934            1 MVSGQRIGQ-SEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQL   79 (290)
Q Consensus         1 ~~ia~~lgl-~~~~~pyl~~~~~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~   79 (290)
                      +|||+.||+ |. +|||+++..++.++.+|+|||+|||++++.+.. ....++|..||++|..+++++....|...+.+.
T Consensus        78 D~iA~~lGl~p~-~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~  155 (351)
T PLN03156         78 DFISEAFGLKPA-IPAYLDPSYNISDFATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEI  155 (351)
T ss_pred             hhHHHHhCCCCC-CCCCcCcccCchhhcccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHH
Confidence            589999999 65 999998755567899999999999998776542 223578999999999998888877776566677


Q ss_pred             hhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcC-C
Q 022934           80 VNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRG-S  158 (290)
Q Consensus        80 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~-~  158 (290)
                      .+++||+||||+|||+..++..+  ......+++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... .
T Consensus       156 ~~~sL~~i~iG~NDy~~~~~~~~--~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~  233 (351)
T PLN03156        156 ISEALYLISIGTNDFLENYYTFP--GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMG  233 (351)
T ss_pred             HhcCeEEEEecchhHHHHhhccc--cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCC
Confidence            89999999999999986554321  11223457889999999999999999999999999999999999999765421 1


Q ss_pred             CCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCC-
Q 022934          159 NGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALS-  237 (290)
Q Consensus       159 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~-  237 (290)
                      ..+|.+.+|.+++.||++|++++++|++++|+++|+++|+|+++.++++||++|||++++++|||.|.++....|++.. 
T Consensus       234 ~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~  313 (351)
T PLN03156        234 GSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNP  313 (351)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCC
Confidence            3579999999999999999999999999999999999999999999999999999999999999988888777899655 


Q ss_pred             CCCCCCCCceeeCCCChhHHHHHHHHHHHHcCC
Q 022934          238 NLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGS  270 (290)
Q Consensus       238 ~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~~  270 (290)
                      .+|++|++|+|||++|||+++|+++|+.++++.
T Consensus       314 ~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l  346 (351)
T PLN03156        314 FTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL  346 (351)
T ss_pred             CccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999863

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information
>PLN02757 sirohydrochlorine ferrochelatase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 2e-55
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  188 bits (477), Expect = 2e-55
 Identities = 55/277 (19%), Positives = 87/277 (31%), Gaps = 24/277 (8%)

Query: 9   QSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVS 68
                    SP    Q +  G N+A  G                   + D      R   
Sbjct: 75  APGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANG-SLIERDNTLLRSRDGY 133

Query: 69  AVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLM 128
            V  A+Q       AL  IT GGNDF+    L    A+     L + V+           
Sbjct: 134 LVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQ----------- 182

Query: 129 RLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKI 188
            L + GAR ++V     LG  PA        G       + +  +N +L   L      +
Sbjct: 183 ALQQAGARYIVVWLLPDLGLTPATFG-----GPLQPFASQLSGTFNAELTAQLSQAGANV 237

Query: 189 GQTVFIAANTQQTHMDFVSNPQAYGFTTAK--VACCGQGPNNGLGLCTALSNLCPNRQLY 246
                I  N      + ++NP ++G    +  +  C  G    +     ++   P+    
Sbjct: 238 -----IPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKL 292

Query: 247 AFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVM 283
            F D  HP+    RLI +  +S  +       L  + 
Sbjct: 293 LFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMA 329

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.39
2hsj_A214 Putative platelet activating factor; structr genom 99.3
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.18
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.1
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.03
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.03
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.03
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.01
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.0
1vjg_A218 Putative lipase from the G-D-S-L family; structura 98.99
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 98.93
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 98.84
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 98.81
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 98.78
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 98.77
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 98.71
3bzw_A274 Putative lipase; protein structure initiative II, 98.42
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 98.38
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 98.27
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 98.25
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.12
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 98.12
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 97.9
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 97.68
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=3.1e-52  Score=409.64  Aligned_cols=251  Identities=22%  Similarity=0.272  Sum_probs=204.9

Q ss_pred             CccccccCCCC-CCCCCCCCCCCCCCCCCcceecccCccc---ccCCCCCcccccCHHHHHHHHH-HHHHHHHHhhChHH
Q 022934            1 MVSGQRIGQSE-APLPYLSPELNGQRLLIGANFASAGIGI---LNDTGIQFVNIIRMFRQLDYFA-EYQRRVSAVIGAQQ   75 (290)
Q Consensus         1 ~~ia~~lgl~~-~~~pyl~~~~~~~~~~~g~NfA~gGA~~---~~~~~~~~~~~~~l~~Qi~~f~-~~~~~~~~~~g~~~   75 (290)
                      +||||.||+|. .++||+++...+.++.+|+|||+|||++   ++.++.....+++|..||.+|. .++.++...     
T Consensus        66 D~ia~~lgl~~~~l~p~~~~~~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~~-----  140 (632)
T 3kvn_X           66 MLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQ-----  140 (632)
T ss_dssp             HHHHHHTTCCGGGGSBSSCHHHHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHTT-----
T ss_pred             HHHHHHcCCCccccCccccccccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhhc-----
Confidence            48999999982 1466665322256899999999999996   4443332345677777877665 444333211     


Q ss_pred             HHHhhhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhh
Q 022934           76 ARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELAL  155 (290)
Q Consensus        76 ~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~  155 (290)
                      ..+..+++||+||||+|||+..+..           .+++++.+++++.++|++||++|||+|+|+++||+||+|...  
T Consensus       141 ~~~~~~~sL~~v~iG~ND~~~~~~~-----------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~--  207 (632)
T 3kvn_X          141 GLGADPNALYYITGGGNDFLQGRIL-----------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF--  207 (632)
T ss_dssp             TCCCCTTSEEEECCSHHHHHTTCCC-----------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT--
T ss_pred             cCccCCCCEEEEEEechhhhccccc-----------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc--
Confidence            1246799999999999999876532           135789999999999999999999999999999999999953  


Q ss_pred             cCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccc--cccccccCCCCcccc
Q 022934          156 RGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAK--VACCGQGPNNGLGLC  233 (290)
Q Consensus       156 ~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~--~~Cc~~g~~~~~~~C  233 (290)
                         ..+|.+.+|+++..||++|++++++|+     .+|+++|+|.++.++++||++|||+++.  ++||+.|.     .|
T Consensus       208 ---~~~c~~~~n~~~~~~N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C  274 (632)
T 3kvn_X          208 ---GGPLQPFASQLSGTFNAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GC  274 (632)
T ss_dssp             ---TSTTHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TS
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----cc
Confidence               247999999999999999999999984     5899999999999999999999999864  69999762     68


Q ss_pred             CCC-----CCCCCCCCCceeeCCCChhHHHHHHHHHHHHcCCCCccCCCChhHhhcC
Q 022934          234 TAL-----SNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMAL  285 (290)
Q Consensus       234 ~~~-----~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~~~~~~~P~~~~~l~~~  285 (290)
                      ++.     ..+|+||++|+|||++||||++|++||+.++++   ++.|+++..|+.+
T Consensus       275 ~~~~~~~~~~~C~~~~~y~fwD~~HpTe~~~~~ia~~~~~~---~~~P~~~~~l~~~  328 (632)
T 3kvn_X          275 TMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSL---LSAPWELTLLPEM  328 (632)
T ss_dssp             CBCTTTSTTSSSCCGGGCSBSSSSCBCHHHHHHHHHHHHHH---HHTHHHHTTHHHH
T ss_pred             CCcccccccccCCCccceEEecCCCCHHHHHHHHHHHHHhc---cCCCccHHHHHHH
Confidence            764     468999999999999999999999999999996   5789999888754
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 290
d1esca_302 c.23.10.1 (A:) Esterase {Streptomyces scabies [Tax 0.003
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Length = 302 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

 Score = 35.9 bits (81), Expect = 0.003
 Identities = 35/252 (13%), Positives = 66/252 (26%), Gaps = 28/252 (11%)

Query: 30  ANFASAG--IGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIG------AQQARQLVN 81
           A+ +  G  I    +          +  Q D   +  +     +G       +  +Q  +
Sbjct: 57  ADVSCGGALIHHFWEKQELPFGAGELPPQQDALKQDTQLTVGSLGGNTLGFNRILKQCSD 116

Query: 82  RALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYEL------GA 135
                  + G+    +                 ++          L  L +        A
Sbjct: 117 ELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEELLDRIGYFAPDA 176

Query: 136 RRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIA 195
           +RVLV     +     +                      P L+Q+ + +N  + +     
Sbjct: 177 KRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDA-LPVLDQIQKRLNDAMKKAA--- 232

Query: 196 ANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPS 255
                   DFV     Y  T A  AC G     G  L  +   L             HP+
Sbjct: 233 ---ADGGADFVD---LYAGTGANTACDGADRGIGGLLEDSQLELLG----TKIPWYAHPN 282

Query: 256 EKANRLIVEQIF 267
           +K   +  +Q+ 
Sbjct: 283 DKGRDIQAKQVA 294

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.3
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 98.96
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 98.81
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.71
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.7
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.69
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 98.53
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 98.46
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 98.39
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 98.34
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.22
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.30  E-value=3.9e-12  Score=110.51  Aligned_cols=128  Identities=13%  Similarity=-0.000  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHh-CCceEEEecCCCCCC---chhhhhhcCC--------CCCccHHhhHHHHHhhHHHHHHHHHHH
Q 022934          118 YIISEYRKLLMRLYEL-GARRVLVTGTGPLGC---VPAELALRGS--------NGGCSAELQRATSLYNPQLEQMLQGIN  185 (290)
Q Consensus       118 ~~v~~i~~~v~~L~~~-GAr~~~v~~lpplg~---~P~~~~~~~~--------~~~c~~~~n~~~~~~N~~L~~~l~~l~  185 (290)
                      .+...+.+.++++.+. +--+|++++.|++.-   .|........        ...-...++++...+|..+++...   
T Consensus       157 ~~~~~l~~~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~---  233 (302)
T d1esca_         157 RVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAA---  233 (302)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH---
Confidence            3444445555555544 233788889887531   0100000000        011233556777777877766443   


Q ss_pred             HHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCCCCCCCceeeCCCChhHHHHHHHHHH
Q 022934          186 RKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQ  265 (290)
Q Consensus       186 ~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~  265 (290)
                          ..++.++|++..|.       .+++-...++|...          .......++..+++||.+|||++||++||+.
T Consensus       234 ----~~~v~~vd~~~~f~-------~~~~c~~~~~~~~~----------~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~  292 (302)
T d1esca_         234 ----DGGADFVDLYAGTG-------ANTACDGADRGIGG----------LLEDSQLELLGTKIPWYAHPNDKGRDIQAKQ  292 (302)
T ss_dssp             ----TTTCEEECTGGGCT-------TSSTTSTTSCSBCC----------SSSEEEEESSSCEEECSSCBCHHHHHHHHHH
T ss_pred             ----HcCCEEEechhhhc-------cccccccccccccc----------cccccccccccccccCCcCCCHHHHHHHHHH
Confidence                34577899887653       11111111111111          0111223567899999999999999999999


Q ss_pred             HHcC
Q 022934          266 IFSG  269 (290)
Q Consensus       266 ~~~~  269 (290)
                      +.+.
T Consensus       293 i~~~  296 (302)
T d1esca_         293 VADK  296 (302)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9863
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure